AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98973

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98973.t1 MTR_1g032100 97.556 532 12 1 1 532 1 531 0.0 1070
MS.gene98973.t1 MTR_8g105260 77.180 539 115 4 1 532 1 538 0.0 835
MS.gene98973.t1 MTR_7g117620 44.123 519 261 8 19 532 52 546 2.95e-132 395
MS.gene98973.t1 MTR_2g096190 43.238 525 271 8 19 532 36 544 3.40e-131 393
MS.gene98973.t1 MTR_4g062100 44.513 483 244 7 14 485 35 504 8.69e-131 392
MS.gene98973.t1 MTR_1g115575 43.156 526 269 9 21 532 84 593 5.75e-128 386
MS.gene98973.t1 MTR_7g100390 41.556 527 280 7 14 532 14 520 4.18e-127 381
MS.gene98973.t1 MTR_7g100430 43.750 480 252 6 54 532 120 582 4.77e-111 342
MS.gene98973.t1 MTR_2g101310 24.490 441 251 8 92 460 138 568 1.32e-30 126
MS.gene98973.t1 MTR_2g101320 22.883 437 264 5 92 460 138 569 3.99e-26 112
MS.gene98973.t1 MTR_2g101310 30.220 182 125 1 92 271 138 319 3.12e-23 103
MS.gene98973.t1 MTR_3g105650 24.866 374 226 9 94 450 39 374 1.44e-22 100
MS.gene98973.t1 MTR_1g069110 26.923 312 205 6 126 415 50 360 1.02e-20 95.5
MS.gene98973.t1 MTR_5g085810 22.921 445 290 10 49 461 262 685 2.38e-17 85.9
MS.gene98973.t1 MTR_8g073260 26.623 308 177 9 95 385 46 321 3.51e-17 84.3
MS.gene98973.t1 MTR_8g068990 24.047 341 210 7 95 414 47 359 9.11e-16 80.1
MS.gene98973.t1 MTR_1g059930 24.662 296 174 8 95 372 47 311 1.68e-14 76.3
MS.gene98973.t1 MTR_8g039620 24.342 304 194 7 95 386 49 328 3.01e-14 75.5
MS.gene98973.t1 MTR_8g040930 22.190 347 203 9 103 412 2 318 5.58e-14 73.9
MS.gene98973.t1 MTR_8g041240 22.190 347 203 9 103 412 2 318 5.58e-14 73.9
MS.gene98973.t1 MTR_7g099570 28.169 213 141 5 95 296 44 255 5.69e-14 75.1
MS.gene98973.t1 MTR_7g021090 26.794 209 133 3 95 291 44 244 5.92e-14 74.3
MS.gene98973.t1 MTR_3g085830 26.523 279 166 10 14 268 109 372 1.54e-13 73.9
MS.gene98973.t1 MTR_5g085480 22.200 491 317 12 40 483 32 504 2.15e-13 73.2
MS.gene98973.t1 MTR_5g085480 22.200 491 317 12 40 483 192 664 4.37e-13 72.4
MS.gene98973.t1 MTR_5g085830 22.624 442 284 14 54 461 240 657 4.99e-13 72.4
MS.gene98973.t1 MTR_3g016210 23.154 298 183 7 97 372 47 320 5.09e-13 71.6
MS.gene98973.t1 MTR_2g096760 26.050 238 143 9 54 274 11 232 1.58e-12 70.1
MS.gene98973.t1 MTR_8g069880 22.308 390 234 10 60 412 6 363 1.81e-12 70.1
MS.gene98973.t1 MTR_8g066670 21.684 392 215 11 89 414 1068 1433 2.62e-11 67.0
MS.gene98973.t1 MTR_8g080080 27.225 191 119 4 76 248 205 393 8.09e-11 65.1
MS.gene98973.t1 MTR_2g033050 28.033 239 160 7 43 272 150 385 8.49e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98973.t1 AT2G01680 67.103 535 170 4 1 532 1 532 0.0 712
MS.gene98973.t1 AT2G31820 44.231 520 267 7 19 532 160 662 3.82e-131 397
MS.gene98973.t1 AT1G05640 43.570 521 272 7 19 532 122 627 1.12e-126 384
MS.gene98973.t1 AT1G07710 41.856 528 283 8 14 532 31 543 1.44e-124 376
MS.gene98973.t1 AT1G07710 41.856 528 283 8 14 532 31 543 1.44e-124 376
MS.gene98973.t1 AT5G60070 44.250 513 259 10 14 509 36 538 9.09e-124 374
MS.gene98973.t1 AT3G12360 42.035 521 278 8 21 532 73 578 4.26e-122 370
MS.gene98973.t1 AT3G12360 42.035 521 278 8 21 532 85 590 4.83e-122 371
MS.gene98973.t1 AT3G09550 44.167 480 255 4 54 532 140 607 2.58e-121 369
MS.gene98973.t1 AT3G09550 44.167 480 255 4 54 532 140 607 2.58e-121 369
MS.gene98973.t1 AT3G09550 41.651 521 283 5 21 532 106 614 2.74e-121 370
MS.gene98973.t1 AT5G02620 42.829 502 250 9 46 532 45 524 5.57e-115 350
MS.gene98973.t1 AT5G02620 42.829 502 250 9 46 532 45 524 5.57e-115 350
MS.gene98973.t1 AT5G02620 42.829 502 250 9 46 532 45 524 5.57e-115 350
MS.gene98973.t1 AT5G02620 41.143 525 249 10 46 532 45 547 4.76e-110 338
MS.gene98973.t1 AT5G02620 41.143 525 249 10 46 532 45 547 4.76e-110 338
MS.gene98973.t1 AT1G34050 25.877 456 298 11 43 486 109 536 2.09e-35 140
MS.gene98973.t1 AT5G54710 26.160 474 309 10 49 485 94 563 1.07e-34 138
MS.gene98973.t1 AT5G54710 26.105 475 310 10 49 486 139 609 1.54e-34 138
MS.gene98973.t1 AT2G24600 22.857 455 316 12 48 479 96 538 2.94e-30 125
MS.gene98973.t1 AT2G24600 22.857 455 316 12 48 479 96 538 2.94e-30 125
MS.gene98973.t1 AT1G10340 21.390 561 324 14 12 483 2 534 7.71e-26 112
MS.gene98973.t1 AT1G10340 20.708 565 327 13 12 483 2 538 1.22e-25 111
MS.gene98973.t1 AT5G51160 28.698 338 195 10 123 427 44 368 1.71e-25 109
MS.gene98973.t1 AT1G03670 24.222 450 295 8 53 490 176 591 9.50e-23 102
MS.gene98973.t1 AT4G03460 25.926 378 223 9 54 414 158 495 3.36e-22 100
MS.gene98973.t1 AT4G03460 25.926 378 223 9 54 414 190 527 4.77e-22 100
MS.gene98973.t1 AT5G54700 22.857 350 214 8 155 496 26 327 9.44e-22 97.1
MS.gene98973.t1 AT4G03490 24.554 448 270 14 84 476 136 570 1.04e-21 99.4
MS.gene98973.t1 AT4G03490 24.554 448 270 14 84 476 126 560 1.20e-21 99.4
MS.gene98973.t1 AT5G50140 22.682 507 315 13 57 501 27 518 1.93e-21 98.2
MS.gene98973.t1 AT4G03490 24.215 446 274 13 84 476 136 570 3.79e-21 97.8
MS.gene98973.t1 AT4G03500 24.536 485 289 14 54 484 110 571 7.80e-21 96.7
MS.gene98973.t1 AT4G03500 24.536 485 289 14 54 484 110 571 7.80e-21 96.7
MS.gene98973.t1 AT4G03500 24.536 485 289 14 54 484 133 594 7.95e-21 96.7
MS.gene98973.t1 AT4G03490 23.587 513 285 16 29 476 42 512 2.88e-20 95.1
MS.gene98973.t1 AT4G03490 24.027 437 248 12 84 476 126 522 5.36e-20 94.4
MS.gene98973.t1 AT4G10720 23.724 392 245 12 95 469 40 394 1.10e-18 89.0
MS.gene98973.t1 AT2G24600 23.810 357 240 11 48 384 96 440 1.22e-17 86.7
MS.gene98973.t1 AT2G24600 23.810 357 240 11 48 384 96 440 1.22e-17 86.7
MS.gene98973.t1 AT4G10720 23.981 417 246 12 95 469 40 427 3.81e-17 84.3
MS.gene98973.t1 AT4G03480 24.868 378 241 8 52 414 310 659 6.80e-15 78.2
MS.gene98973.t1 AT4G03480 24.868 378 241 8 52 414 307 656 6.83e-15 78.2
MS.gene98973.t1 AT5G15500 24.286 350 211 10 95 416 41 364 9.77e-15 77.0
MS.gene98973.t1 AT5G54610 23.936 376 234 12 60 416 5 347 1.62e-14 76.3
MS.gene98973.t1 AT5G54700 28.671 143 96 3 335 473 200 340 1.73e-14 76.3
MS.gene98973.t1 AT1G14500 27.119 236 154 6 95 314 40 273 1.33e-12 70.1
MS.gene98973.t1 AT3G04140 30.435 184 109 5 84 248 217 400 1.57e-12 70.5
MS.gene98973.t1 AT3G04140 24.699 332 191 9 14 301 106 422 2.74e-12 69.7
MS.gene98973.t1 AT4G03450 24.458 323 214 5 97 414 228 525 3.35e-12 69.7
MS.gene98973.t1 AT4G03450 24.458 323 214 5 97 414 228 525 4.06e-12 69.3
MS.gene98973.t1 AT1G14480 27.753 227 146 5 97 307 42 266 5.55e-12 68.2
MS.gene98973.t1 AT5G54620 26.432 227 140 7 95 302 40 258 1.53e-11 67.0
MS.gene98973.t1 AT2G28840 27.273 209 125 6 96 290 50 245 3.91e-11 65.9

Find 106 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTATATTCCTGGCATTCT+TGG 0.206434 1.4:-16946573 None:intergenic
GGATGTGGTGAATGCTATTT+TGG 0.213298 1.4:+16945969 MS.gene98973:CDS
AACTACTGTGACAGAATTTA+TGG 0.213745 1.4:-16946747 None:intergenic
AAAACTCGCAAACGAGTTTC+TGG 0.237666 1.4:+16946677 MS.gene98973:CDS
TGTTTGCATCAAAGATAAAA+AGG 0.238955 1.4:+16946110 MS.gene98973:CDS
GGCTACTACTGTAACCGTTT+TGG 0.267999 1.4:+16947084 MS.gene98973:CDS
CTTGTTAAGGTTATGTGATT+TGG 0.269520 1.4:+16944463 MS.gene98973:CDS
TTTGTGTTCCGGCGACATTT+TGG 0.304444 1.4:+16947148 MS.gene98973:CDS
TGCTGCTAAGCGTGGCCATT+TGG 0.312697 1.4:+16944532 MS.gene98973:CDS
GTCTCTTGGCTAGTACTCTC+TGG 0.312814 1.4:-16947186 None:intergenic
ATTCAGTTTGCCTATATTCC+TGG 0.313342 1.4:-16946582 None:intergenic
GCACTTCATATGGCTGTAAA+AGG 0.314512 1.4:+16946141 MS.gene98973:CDS
TGACAGAATTTATGGTGTTT+TGG 0.321558 1.4:-16946739 None:intergenic
TTTGCTTCCACTTGGTCTCT+TGG 0.337842 1.4:-16947200 None:intergenic
GCAAGAAACAGCCTTGGATT+TGG 0.347383 1.4:+16946487 MS.gene98973:CDS
TGAATGCTATTGATGCAAAA+AGG 0.362313 1.4:-16946775 None:intergenic
TTCAAATCACTTTGGTAGCT+TGG 0.363305 1.4:+16946939 MS.gene98973:CDS
AGCTGCTGTTCAAGACCATT+TGG 0.370230 1.4:+16945948 MS.gene98973:CDS
ACTTGTGCTACTTTGTGTTC+CGG 0.375914 1.4:+16947137 MS.gene98973:CDS
GCTGCTAAGCGTGGCCATTT+GGG 0.377108 1.4:+16944533 MS.gene98973:CDS
TTGCACAATGCGGCTAGGTA+TGG 0.405460 1.4:+16946042 MS.gene98973:CDS
TTGTATATAGCTGCAGAAAA+TGG 0.410625 1.4:+16944419 MS.gene98973:CDS
TCAAATCACTTTGGTAGCTT+GGG 0.417875 1.4:+16946940 MS.gene98973:CDS
ATGGCTTTGTTCAGTTTGCC+AGG 0.419971 1.4:+16946797 MS.gene98973:CDS
AACAAAGGTGAATCCTCAAA+TGG 0.426507 1.4:+16944338 MS.gene98973:CDS
GCTAGAGTCCCAACTAGAAT+TGG 0.429264 1.4:-16947112 None:intergenic
AGAAAGCAACAGCCGGAGGC+AGG 0.430156 1.4:+16946827 MS.gene98973:CDS
GCCAAGAATGCCAGGAATAT+AGG 0.449868 1.4:+16946572 MS.gene98973:CDS
GCAACAGCCGGAGGCAGGGA+AGG 0.450570 1.4:+16946832 MS.gene98973:CDS
ATTTGGAGATACTCAAAATC+AGG 0.451363 1.4:+16944480 MS.gene98973:CDS
GGGTCAAACAGCACTTCATA+TGG 0.457229 1.4:+16946131 MS.gene98973:CDS
TCAGTTCAATGATGATAGTA+AGG 0.464242 1.4:+16946001 MS.gene98973:CDS
TGGGAACACCAATTCTAGTT+GGG 0.465768 1.4:+16947104 MS.gene98973:CDS
TTGGGAACACCAATTCTAGT+TGG 0.466920 1.4:+16947103 MS.gene98973:CDS
GAACCACATTGAAAATATCT+TGG 0.469486 1.4:-16944271 None:intergenic
CAATAAGTGCTTTCACGATA+CGG 0.475604 1.4:-16946071 None:intergenic
TCTCTTGGCTAGTACTCTCT+GGG 0.477333 1.4:-16947185 None:intergenic
ATAAAGTGGACTAGTGTTTG+AGG 0.478223 1.4:-16945923 None:intergenic
GTTCGATCTGGTGATCTTGA+AGG 0.481638 1.4:+16944290 MS.gene98973:CDS
TAGAATTGGTGTTCCCAAAA+CGG 0.489993 1.4:-16947098 None:intergenic
TGGTTGTTGGAAAGGAAAGA+TGG 0.491658 1.4:+16947059 MS.gene98973:CDS
CTTGGCACCACATTCAGAAA+GGG 0.495256 1.4:-16946555 None:intergenic
TGCACAATGCGGCTAGGTAT+GGG 0.497914 1.4:+16946043 MS.gene98973:CDS
AGATTCATCTCTGGAAATCA+AGG 0.501491 1.4:+16946529 MS.gene98973:CDS
TGAACAGCAGCTAAATAAAG+TGG 0.504357 1.4:-16945937 None:intergenic
AATTCAGAAATTGATGATGA+TGG 0.505913 1.4:-16944362 None:intergenic
CTTTGGTAGCTTGGGACACA+AGG 0.509015 1.4:+16946948 MS.gene98973:CDS
GAAAGCAACAGCCGGAGGCA+GGG 0.509958 1.4:+16946828 MS.gene98973:CDS
GAGAATGATTTGCTTCCACT+TGG 0.512219 1.4:-16947208 None:intergenic
ACGGCTTGTGCGTGCACTTG+TGG 0.513592 1.4:+16947013 MS.gene98973:CDS
CAGCTCTTCACATGGCTACT+CGG 0.515478 1.4:+16946241 MS.gene98973:CDS
TCTTGGCACCACATTCAGAA+AGG 0.517035 1.4:-16946556 None:intergenic
TTGTCCATGCAGAATGATGC+TGG 0.517194 1.4:+16944386 MS.gene98973:CDS
TGATGATGATGGCCCATTTG+AGG 0.517523 1.4:-16944351 None:intergenic
GGAATTGAGGAAAATTCATC+GGG 0.521997 1.4:+16946709 MS.gene98973:CDS
CTGGTATAGCTAAGGAATTG+AGG 0.530895 1.4:+16946696 MS.gene98973:CDS
TAGCATTCACCACATCCAAA+TGG 0.533118 1.4:-16945963 None:intergenic
TACTCGGAAAGCTCGTTCGC+AGG 0.533833 1.4:+16946257 MS.gene98973:CDS
ACAAAGGTGAATCCTCAAAT+GGG 0.536340 1.4:+16944339 MS.gene98973:CDS
TCGCATAACTTACAAGCCTC+AGG 0.537583 1.4:-16945898 None:intergenic
AGGAATTGAGGAAAATTCAT+CGG 0.537584 1.4:+16946708 MS.gene98973:CDS
TCCGTACGGAGATTCATCTC+TGG 0.537976 1.4:+16946520 MS.gene98973:CDS
TAATCAGCAAGAAACAGCCT+TGG 0.538754 1.4:+16946481 MS.gene98973:CDS
ATCATTCTCATGGTCTTACT+CGG 0.539729 1.4:+16947222 MS.gene98973:CDS
CCACATTGAAAATATCTTGG+TGG 0.546803 1.4:-16944268 None:intergenic
TTCTCCAGCATCATTCTGCA+TGG 0.550912 1.4:-16944390 None:intergenic
AATGTGGTGCCAAGAATGCC+AGG 0.559844 1.4:+16946564 MS.gene98973:CDS
TGTTGCTTTCTATATTGACC+TGG 0.564706 1.4:-16946815 None:intergenic
ACGAGTTTCTGGTATAGCTA+AGG 0.567343 1.4:+16946688 MS.gene98973:CDS
CACATTGAAAATATCTTGGT+GGG 0.567972 1.4:-16944267 None:intergenic
CTGCGTTGCACAATGCGGCT+AGG 0.570252 1.4:+16946037 MS.gene98973:CDS
TGTTGTTGTTCAAATCACTT+TGG 0.570912 1.4:+16946931 MS.gene98973:CDS
CAGAAGACAGAAAGCACTGA+AGG 0.573255 1.4:-16946876 None:intergenic
ATATTCGCCTTCCCTGCCTC+CGG 0.575896 1.4:-16946839 None:intergenic
GTGGAAGCAAATCATTCTCA+TGG 0.577834 1.4:+16947212 MS.gene98973:CDS
AAGTTTATCTGCCAAATCCA+AGG 0.578992 1.4:-16946498 None:intergenic
TCGTGAAAGCACTTATTGCA+AGG 0.581715 1.4:+16946076 MS.gene98973:CDS
TTCGGAATCCAAAATGTCGC+CGG 0.585823 1.4:-16947156 None:intergenic
AAGGAAGCCCTTTCTGAATG+TGG 0.588384 1.4:+16946548 MS.gene98973:CDS
TCAATATAGAAAGCAACAGC+CGG 0.602944 1.4:+16946820 MS.gene98973:CDS
AGGACAGTGTACTTCAGTAG+TGG 0.604681 1.4:+16946161 MS.gene98973:CDS
GTACTAGCCAAGAGACCAAG+TGG 0.606753 1.4:+16947193 MS.gene98973:CDS
CGGTGATTAACAAGCTAATG+TGG 0.606844 1.4:+16946990 MS.gene98973:CDS
AGGCAAACTGAATGAAGCCA+TGG 0.607579 1.4:+16946592 MS.gene98973:CDS
TGTTCAAGACCATTTGGATG+TGG 0.612236 1.4:+16945954 MS.gene98973:CDS
GTACTCTCTGGGATTCACTT+CGG 0.612803 1.4:-16947174 None:intergenic
ACAGTGTACTTCAGTAGTGG+AGG 0.615069 1.4:+16946164 MS.gene98973:CDS
TTGGCAGATAAACTTCCGTA+CGG 0.616155 1.4:+16946506 MS.gene98973:CDS
TCCAGAGATGAATCTCCGTA+CGG 0.620002 1.4:-16946521 None:intergenic
CTCGGCACATATATCAGATG+AGG 0.620591 1.4:+16947240 MS.gene98973:CDS
CGTGAAAGCACTTATTGCAA+GGG 0.622452 1.4:+16946077 MS.gene98973:CDS
GGGCAATACAGCTCTTCACA+TGG 0.627279 1.4:+16946233 MS.gene98973:CDS
TTTCATGTTGCTGCTAAGCG+TGG 0.628604 1.4:+16944524 MS.gene98973:CDS
GGCACATATATCAGATGAGG+AGG 0.636443 1.4:+16947243 MS.gene98973:CDS
GATTAACAAGCTAATGTGGA+CGG 0.640672 1.4:+16946994 MS.gene98973:CDS
TTTGGTAGCTTGGGACACAA+GGG 0.645817 1.4:+16946949 MS.gene98973:CDS
TGATCTTGAAGGACTCAAAG+AGG 0.646202 1.4:+16944301 MS.gene98973:CDS
AGCCATGGAACTTAAAAGAG+TGG 0.647486 1.4:+16946607 MS.gene98973:CDS
GTGCTGAAACATGTTAACAA+AGG 0.648845 1.4:+16944323 MS.gene98973:CDS
GGCTCAAAGACAGATTGTGT+CGG 0.649739 1.4:+16946970 MS.gene98973:CDS
TGTTGGAAAGGAAAGATGGA+TGG 0.673837 1.4:+16947063 MS.gene98973:CDS
ATATAGAAAGCAACAGCCGG+AGG 0.691860 1.4:+16946823 MS.gene98973:CDS
CAAAACTGCGTTGCACAATG+CGG 0.692189 1.4:+16946032 MS.gene98973:CDS
TAAGTGCTTTCACGATACGG+AGG 0.720583 1.4:-16946068 None:intergenic
GAGAGAAATGAAAAGAGACG+TGG 0.721398 1.4:-16946903 None:intergenic
GGTGAGTGATATAAAGCACG+AGG 0.733499 1.4:+16946628 MS.gene98973:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACAGAAATCAAATA+TGG - chr1.4:16946292-16946311 None:intergenic 15.0%
!!! ATCACATGATTTTAAAAAAT+CGG - chr1.4:16945321-16945340 None:intergenic 15.0%
!! AAAGAAAAAATATACCCAAA+TGG - chr1.4:16944550-16944569 None:intergenic 20.0%
!! AGTAAAAAAAAATCATGTCT+AGG - chr1.4:16945057-16945076 None:intergenic 20.0%
!! ATTAAACGAAAAAGATAAGA+AGG + chr1.4:16946212-16946231 MS.gene98973:CDS 20.0%
!! TTAAACGAAAAAGATAAGAA+GGG + chr1.4:16946213-16946232 MS.gene98973:CDS 20.0%
!! TTAATATCAGCAATATTGAA+GGG - chr1.4:16945805-16945824 None:intergenic 20.0%
!!! GATTTTTTAAAATCATGTGA+TGG + chr1.4:16945320-16945339 MS.gene98973:intron 20.0%
!!! TTCATTCTTTTTCATCAATT+GGG + chr1.4:16944593-16944612 MS.gene98973:intron 20.0%
!!! TTTCATTCTTTTTCATCAAT+TGG + chr1.4:16944592-16944611 MS.gene98973:intron 20.0%
! AAAATCAGAAACTATTCTGA+TGG - chr1.4:16945093-16945112 None:intergenic 25.0%
! AAAGTAAAATATCAAGGCTA+AGG + chr1.4:16945414-16945433 MS.gene98973:intron 25.0%
! AACATGACATAATTATACAC+AGG - chr1.4:16946372-16946391 None:intergenic 25.0%
! AAGTAAAATATCAAGGCTAA+GGG + chr1.4:16945415-16945434 MS.gene98973:intron 25.0%
! AATCCTAATAAAAGCAGTAT+GGG - chr1.4:16944649-16944668 None:intergenic 25.0%
! ATGATGATAGTAAGGAAAAA+CGG + chr1.4:16946009-16946028 MS.gene98973:CDS 25.0%
! ATGCAATTAAGTACAAATTG+TGG - chr1.4:16945673-16945692 None:intergenic 25.0%
! CCTACAAAAGTAAAATATCA+AGG + chr1.4:16945408-16945427 MS.gene98973:intron 25.0%
! CTTAATATCAGCAATATTGA+AGG - chr1.4:16945806-16945825 None:intergenic 25.0%
! CTTCAATATTGCTGATATTA+AGG + chr1.4:16945804-16945823 MS.gene98973:intron 25.0%
! GTTTGCATCAAAGATAAAAA+GGG + chr1.4:16946111-16946130 MS.gene98973:CDS 25.0%
! TCGCAATATACATAATCATT+AGG - chr1.4:16945274-16945293 None:intergenic 25.0%
! TGTTTGCATCAAAGATAAAA+AGG + chr1.4:16946110-16946129 MS.gene98973:CDS 25.0%
!! AATTGGGTACATTTTATTGA+TGG + chr1.4:16944609-16944628 MS.gene98973:intron 25.0%
!! TATACACAGGTCTAAAATAA+TGG - chr1.4:16946359-16946378 None:intergenic 25.0%
!!! AATTCAGAAATTGATGATGA+TGG - chr1.4:16944365-16944384 None:intergenic 25.0%
!!! CCTTGATATTTTACTTTTGT+AGG - chr1.4:16945411-16945430 None:intergenic 25.0%
!!! CTTTTTCGTTTAATACCATT+GGG - chr1.4:16946206-16946225 None:intergenic 25.0%
!!! GAACAAATTACTCTAAAACA+TGG - chr1.4:16945143-16945162 None:intergenic 25.0%
!!! TCTTTTTCGTTTAATACCAT+TGG - chr1.4:16946207-16946226 None:intergenic 25.0%
!!! TTTTTTTCCAGAAATTGTGA+GGG + chr1.4:16945858-16945877 MS.gene98973:intron 25.0%
AACTACTGTGACAGAATTTA+TGG - chr1.4:16946750-16946769 None:intergenic 30.0%
AAGATGCATCTTGTTGATAT+GGG + chr1.4:16944826-16944845 MS.gene98973:intron 30.0%
AGGAATTGAGGAAAATTCAT+CGG + chr1.4:16946708-16946727 MS.gene98973:CDS 30.0%
ATGCAATTCAGTACAAATTG+TGG - chr1.4:16945552-16945571 None:intergenic 30.0%
ATTTGGAGATACTCAAAATC+AGG + chr1.4:16944480-16944499 MS.gene98973:CDS 30.0%
CAATCCTAATAAAAGCAGTA+TGG - chr1.4:16944650-16944669 None:intergenic 30.0%
CACATTGAAAATATCTTGGT+GGG - chr1.4:16944270-16944289 None:intergenic 30.0%
CTTGTTAAGGTTATGTGATT+TGG + chr1.4:16944463-16944482 MS.gene98973:CDS 30.0%
CTTTATATTGCGGAAAAATG+TGG + chr1.4:16945206-16945225 MS.gene98973:intron 30.0%
GAACCACATTGAAAATATCT+TGG - chr1.4:16944274-16944293 None:intergenic 30.0%
GAAGGCTTATAAGAATTGTT+AGG - chr1.4:16944857-16944876 None:intergenic 30.0%
GTATCTGCTACATATTCATA+AGG + chr1.4:16945370-16945389 MS.gene98973:intron 30.0%
TCAGTTCAATGATGATAGTA+AGG + chr1.4:16946001-16946020 MS.gene98973:CDS 30.0%
TGAATGCTATTGATGCAAAA+AGG - chr1.4:16946778-16946797 None:intergenic 30.0%
TTGTATATAGCTGCAGAAAA+TGG + chr1.4:16944419-16944438 MS.gene98973:CDS 30.0%
! AACAAGATGCATCTTCTTTT+CGG - chr1.4:16944821-16944840 None:intergenic 30.0%
! AATCCTAGTTTGCGAAAATT+CGG + chr1.4:16945462-16945481 MS.gene98973:intron 30.0%
! ATGTTTTCAGCTTCTTGTTA+AGG + chr1.4:16944450-16944469 MS.gene98973:CDS 30.0%
! CACATTTTTCCGCAATATAA+AGG - chr1.4:16945208-16945227 None:intergenic 30.0%
! TGACAGAATTTATGGTGTTT+TGG - chr1.4:16946742-16946761 None:intergenic 30.0%
! TGTTGTTGTTCAAATCACTT+TGG + chr1.4:16946931-16946950 MS.gene98973:CDS 30.0%
! TTTTGCATCAATAGCATTCA+TGG + chr1.4:16946778-16946797 MS.gene98973:CDS 30.0%
!!! ATTTCTGTTTTTTTACCCCA+TGG + chr1.4:16946298-16946317 MS.gene98973:intron 30.0%
!!! CTTTTTTTCCAGAAATTGTG+AGG + chr1.4:16945857-16945876 MS.gene98973:intron 30.0%
AAAATCTCCCTCACAATTTC+TGG - chr1.4:16945868-16945887 None:intergenic 35.0%
AACAAAGGTGAATCCTCAAA+TGG + chr1.4:16944338-16944357 MS.gene98973:CDS 35.0%
AAGTTTATCTGCCAAATCCA+AGG - chr1.4:16946501-16946520 None:intergenic 35.0%
ACAAAGGTGAATCCTCAAAT+GGG + chr1.4:16944339-16944358 MS.gene98973:CDS 35.0%
ACAGCAAGTTTGCGAAAATT+CGG + chr1.4:16945583-16945602 MS.gene98973:intron 35.0%
ATTCAGTTTGCCTATATTCC+TGG - chr1.4:16946585-16946604 None:intergenic 35.0%
CAATAAGTGCTTTCACGATA+CGG - chr1.4:16946074-16946093 None:intergenic 35.0%
CCACATTGAAAATATCTTGG+TGG - chr1.4:16944271-16944290 None:intergenic 35.0%
GAAGATGCATCTTGTTGATA+TGG + chr1.4:16944825-16944844 MS.gene98973:intron 35.0%
GATTAACAAGCTAATGTGGA+CGG + chr1.4:16946994-16947013 MS.gene98973:CDS 35.0%
GGAATTGAGGAAAATTCATC+GGG + chr1.4:16946709-16946728 MS.gene98973:CDS 35.0%
GTGCTGAAACATGTTAACAA+AGG + chr1.4:16944323-16944342 MS.gene98973:CDS 35.0%
TATCCAGTGTTGTCAAATAG+CGG - chr1.4:16945751-16945770 None:intergenic 35.0%
TCAATATAGAAAGCAACAGC+CGG + chr1.4:16946820-16946839 MS.gene98973:CDS 35.0%
TGAACAGCAGCTAAATAAAG+TGG - chr1.4:16945940-16945959 None:intergenic 35.0%
! AGATTCATCTCTGGAAATCA+AGG + chr1.4:16946529-16946548 MS.gene98973:CDS 35.0%
! ATCATTCTCATGGTCTTACT+CGG + chr1.4:16947222-16947241 MS.gene98973:CDS 35.0%
! ATTTTCAATGTGGTTCGATC+TGG + chr1.4:16944278-16944297 MS.gene98973:CDS 35.0%
! CCACCAAGATATTTTCAATG+TGG + chr1.4:16944268-16944287 MS.gene98973:CDS 35.0%
! GCTCACTATCTGAAATAGAT+AGG - chr1.4:16946420-16946439 None:intergenic 35.0%
! TAGAATTGGTGTTCCCAAAA+CGG - chr1.4:16947101-16947120 None:intergenic 35.0%
! TCAAATCACTTTGGTAGCTT+GGG + chr1.4:16946940-16946959 MS.gene98973:CDS 35.0%
! TTCAAATCACTTTGGTAGCT+TGG + chr1.4:16946939-16946958 MS.gene98973:CDS 35.0%
! TTGTCAAATAGCGGAAATAG+TGG - chr1.4:16945742-16945761 None:intergenic 35.0%
! TTTTCTCGCAATAGCTTTTG+TGG + chr1.4:16947039-16947058 MS.gene98973:CDS 35.0%
!! ATAAAGTGGACTAGTGTTTG+AGG - chr1.4:16945926-16945945 None:intergenic 35.0%
!! CATCCCATACTGCTTTTATT+AGG + chr1.4:16944643-16944662 MS.gene98973:intron 35.0%
!! TGTTGCTTTCTATATTGACC+TGG - chr1.4:16946818-16946837 None:intergenic 35.0%
!! TTTTATTCTAGTTGCGATCG+TGG + chr1.4:16945164-16945183 MS.gene98973:intron 35.0%
AAAACTCGCAAACGAGTTTC+TGG + chr1.4:16946677-16946696 MS.gene98973:CDS 40.0%
AAACTGAAGCAAAGCAACCA+TGG - chr1.4:16946318-16946337 None:intergenic 40.0%
AACTGAAGCAAAGCAACCAT+GGG - chr1.4:16946317-16946336 None:intergenic 40.0%
ACGATATCGCGACATCAATT+TGG - chr1.4:16945242-16945261 None:intergenic 40.0%
AGCCATGGAACTTAAAAGAG+TGG + chr1.4:16946607-16946626 MS.gene98973:CDS 40.0%
ATTCTGATGGTTTAGCACAG+TGG - chr1.4:16945080-16945099 None:intergenic 40.0%
CGGTGATTAACAAGCTAATG+TGG + chr1.4:16946990-16947009 MS.gene98973:CDS 40.0%
CTGGTATAGCTAAGGAATTG+AGG + chr1.4:16946696-16946715 MS.gene98973:CDS 40.0%
GAGAGAAATGAAAAGAGACG+TGG - chr1.4:16946906-16946925 None:intergenic 40.0%
GCACTTCATATGGCTGTAAA+AGG + chr1.4:16946141-16946160 MS.gene98973:CDS 40.0%
GCTTAACTGTGGAGTTCTTA+TGG + chr1.4:16944786-16944805 MS.gene98973:intron 40.0%
GTGGAAGCAAATCATTCTCA+TGG + chr1.4:16947212-16947231 MS.gene98973:CDS 40.0%
TAATCAGCAAGAAACAGCCT+TGG + chr1.4:16946481-16946500 MS.gene98973:CDS 40.0%
TAGCATTCACCACATCCAAA+TGG - chr1.4:16945966-16945985 None:intergenic 40.0%
TGATCTTGAAGGACTCAAAG+AGG + chr1.4:16944301-16944320 MS.gene98973:CDS 40.0%
TGGTTGTTGGAAAGGAAAGA+TGG + chr1.4:16947059-16947078 MS.gene98973:CDS 40.0%
TGTTCAAGACCATTTGGATG+TGG + chr1.4:16945954-16945973 MS.gene98973:CDS 40.0%
TGTTGGAAAGGAAAGATGGA+TGG + chr1.4:16947063-16947082 MS.gene98973:CDS 40.0%
TTCATAAGGTCTCACATGAC+AGG + chr1.4:16945384-16945403 MS.gene98973:intron 40.0%
TTGGCAGATAAACTTCCGTA+CGG + chr1.4:16946506-16946525 MS.gene98973:CDS 40.0%
TTGGGAACACCAATTCTAGT+TGG + chr1.4:16947103-16947122 MS.gene98973:CDS 40.0%
TTTCCGCTATTTGACAACAC+TGG + chr1.4:16945745-16945764 MS.gene98973:intron 40.0%
! ACTCCGAATTTTCGCAAACT+AGG - chr1.4:16945468-16945487 None:intergenic 40.0%
! ACTTGGAGTAGTCTTAGGAT+GGG - chr1.4:16944759-16944778 None:intergenic 40.0%
! AGCTTTTGTGGTTGTTGGAA+AGG + chr1.4:16947051-16947070 MS.gene98973:CDS 40.0%
! GATTTTACAAGCTGACCCAA+TGG + chr1.4:16946188-16946207 MS.gene98973:CDS 40.0%
! GCAATAGCTTTTGTGGTTGT+TGG + chr1.4:16947046-16947065 MS.gene98973:CDS 40.0%
! GCTACTACTGTAACCGTTTT+GGG + chr1.4:16947085-16947104 MS.gene98973:CDS 40.0%
! TGGGAACACCAATTCTAGTT+GGG + chr1.4:16947104-16947123 MS.gene98973:CDS 40.0%
! TTCGTAGTTTTCTTGACACG+TGG + chr1.4:16946390-16946409 MS.gene98973:intron 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - chr1.4:16944683-16944702 None:intergenic 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - chr1.4:16944682-16944701 None:intergenic 40.0%
!! ACGAGTTTCTGGTATAGCTA+AGG + chr1.4:16946688-16946707 MS.gene98973:CDS 40.0%
!! ACTTGTGCTACTTTGTGTTC+CGG + chr1.4:16947137-16947156 MS.gene98973:CDS 40.0%
!! CGTGAAAGCACTTATTGCAA+GGG + chr1.4:16946077-16946096 MS.gene98973:CDS 40.0%
!! GAGAATGATTTGCTTCCACT+TGG - chr1.4:16947211-16947230 None:intergenic 40.0%
!! GGATGTGGTGAATGCTATTT+TGG + chr1.4:16945969-16945988 MS.gene98973:CDS 40.0%
!! TCGTGAAAGCACTTATTGCA+AGG + chr1.4:16946076-16946095 MS.gene98973:CDS 40.0%
!! TGAGGGAGATTTTGAGTACT+TGG + chr1.4:16945875-16945894 MS.gene98973:CDS 40.0%
!!! CACCACTCTTTTAAGTTCCA+TGG - chr1.4:16946612-16946631 None:intergenic 40.0%
AACCTTTCGTATCCAACTGG+CGG + chr1.4:16944996-16945015 MS.gene98973:intron 45.0%
AAGGAAGCCCTTTCTGAATG+TGG + chr1.4:16946548-16946567 MS.gene98973:CDS 45.0%
AAGGATGACCCCACGATAAT+AGG - chr1.4:16944948-16944967 None:intergenic 45.0%
AAGTCAAGCACGCTTAACTG+TGG + chr1.4:16944775-16944794 MS.gene98973:intron 45.0%
ACAGTGTACTTCAGTAGTGG+AGG + chr1.4:16946164-16946183 MS.gene98973:CDS 45.0%
ACAGTTAAGCGTGCTTGACT+TGG - chr1.4:16944776-16944795 None:intergenic 45.0%
ACTGAAGCAAAGCAACCATG+GGG - chr1.4:16946316-16946335 None:intergenic 45.0%
AGCTGCTGTTCAAGACCATT+TGG + chr1.4:16945948-16945967 MS.gene98973:CDS 45.0%
AGGACAGTGTACTTCAGTAG+TGG + chr1.4:16946161-16946180 MS.gene98973:CDS 45.0%
AGGCAAACTGAATGAAGCCA+TGG + chr1.4:16946592-16946611 MS.gene98973:CDS 45.0%
ATATAGAAAGCAACAGCCGG+AGG + chr1.4:16946823-16946842 MS.gene98973:CDS 45.0%
CAAAACTGCGTTGCACAATG+CGG + chr1.4:16946032-16946051 MS.gene98973:CDS 45.0%
CATGTAGTCCCATACCTACA+CGG + chr1.4:16944884-16944903 MS.gene98973:intron 45.0%
CCTCTCATTCCGATGTGATT+CGG + chr1.4:16944917-16944936 MS.gene98973:intron 45.0%
CGAATCACATCGGAATGAGA+GGG - chr1.4:16944919-16944938 None:intergenic 45.0%
CTCGGCACATATATCAGATG+AGG + chr1.4:16947240-16947259 MS.gene98973:CDS 45.0%
CTTGGCACCACATTCAGAAA+GGG - chr1.4:16946558-16946577 None:intergenic 45.0%
GCAAGAAACAGCCTTGGATT+TGG + chr1.4:16946487-16946506 MS.gene98973:CDS 45.0%
GCCAAGAATGCCAGGAATAT+AGG + chr1.4:16946572-16946591 MS.gene98973:CDS 45.0%
GCCTATATTCCTGGCATTCT+TGG - chr1.4:16946576-16946595 None:intergenic 45.0%
GCGGAAAAATGTGGCTGATT+AGG + chr1.4:16945215-16945234 MS.gene98973:intron 45.0%
GCTAGAGTCCCAACTAGAAT+TGG - chr1.4:16947115-16947134 None:intergenic 45.0%
GGCACATATATCAGATGAGG+AGG + chr1.4:16947243-16947262 MS.gene98973:CDS 45.0%
GGCTCAAAGACAGATTGTGT+CGG + chr1.4:16946970-16946989 MS.gene98973:CDS 45.0%
GGGTCAAACAGCACTTCATA+TGG + chr1.4:16946131-16946150 MS.gene98973:CDS 45.0%
GGTGAGTGATATAAAGCACG+AGG + chr1.4:16946628-16946647 MS.gene98973:CDS 45.0%
GTATGGGACTACATGGTTGA+AGG - chr1.4:16944879-16944898 None:intergenic 45.0%
GTTCGATCTGGTGATCTTGA+AGG + chr1.4:16944290-16944309 MS.gene98973:CDS 45.0%
TAAGTGCTTTCACGATACGG+AGG - chr1.4:16946071-16946090 None:intergenic 45.0%
TAGGAGGAACCGAATCACAT+CGG - chr1.4:16944929-16944948 None:intergenic 45.0%
TATTGCGATCCTCCCAATTG+CGG + chr1.4:16945286-16945305 MS.gene98973:intron 45.0%
TCCAGAGATGAATCTCCGTA+CGG - chr1.4:16946524-16946543 None:intergenic 45.0%
TCGCATAACTTACAAGCCTC+AGG - chr1.4:16945901-16945920 None:intergenic 45.0%
TCGGTTCCTCCTATTATCGT+GGG + chr1.4:16944936-16944955 MS.gene98973:intron 45.0%
TCTCTTGGCTAGTACTCTCT+GGG - chr1.4:16947188-16947207 None:intergenic 45.0%
TCTTGGCACCACATTCAGAA+AGG - chr1.4:16946559-16946578 None:intergenic 45.0%
TGCTGCGAGCCTTTATATTG+CGG + chr1.4:16945196-16945215 MS.gene98973:intron 45.0%
TTATCGTGGGGTCATCCTTA+CGG + chr1.4:16944949-16944968 MS.gene98973:intron 45.0%
TTCGGAATCCAAAATGTCGC+CGG - chr1.4:16947159-16947178 None:intergenic 45.0%
TTCGGTTCCTCCTATTATCG+TGG + chr1.4:16944935-16944954 MS.gene98973:intron 45.0%
TTCTCCAGCATCATTCTGCA+TGG - chr1.4:16944393-16944412 None:intergenic 45.0%
TTGTCCATGCAGAATGATGC+TGG + chr1.4:16944386-16944405 MS.gene98973:CDS 45.0%
TTTCATGTTGCTGCTAAGCG+TGG + chr1.4:16944524-16944543 MS.gene98973:CDS 45.0%
TTTGCTTCCACTTGGTCTCT+TGG - chr1.4:16947203-16947222 None:intergenic 45.0%
! GACTTGGAGTAGTCTTAGGA+TGG - chr1.4:16944760-16944779 None:intergenic 45.0%
! GGCTACTACTGTAACCGTTT+TGG + chr1.4:16947084-16947103 MS.gene98973:CDS 45.0%
! TTTGGTAGCTTGGGACACAA+GGG + chr1.4:16946949-16946968 MS.gene98973:CDS 45.0%
! TTTGTGTTCCGGCGACATTT+TGG + chr1.4:16947148-16947167 MS.gene98973:CDS 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - chr1.4:16944681-16944700 None:intergenic 45.0%
!! ATGGCTTTGTTCAGTTTGCC+AGG + chr1.4:16946797-16946816 MS.gene98973:CDS 45.0%
!! CAGAAGACAGAAAGCACTGA+AGG - chr1.4:16946879-16946898 None:intergenic 45.0%
!! GATTTTGAGTACTTGGCCTG+AGG + chr1.4:16945882-16945901 MS.gene98973:CDS 45.0%
!! GCTTGACTTGGAGTAGTCTT+AGG - chr1.4:16944764-16944783 None:intergenic 45.0%
!! GTACTCTCTGGGATTCACTT+CGG - chr1.4:16947177-16947196 None:intergenic 45.0%
!! TGATGATGATGGCCCATTTG+AGG - chr1.4:16944354-16944373 None:intergenic 45.0%
!! TGTTGGTTTGTGGGGTTAGT+AGG - chr1.4:16944673-16944692 None:intergenic 45.0%
ACATCGGAATGAGAGGGATC+CGG - chr1.4:16944913-16944932 None:intergenic 50.0%
ACCTTTCGTATCCAACTGGC+GGG + chr1.4:16944997-16945016 MS.gene98973:intron 50.0%
ATAATGCCCGTTCCAACTGG+CGG + chr1.4:16944972-16944991 MS.gene98973:intron 50.0%
CACGCTGAAAAGACTCGTGT+TGG - chr1.4:16944690-16944709 None:intergenic 50.0%
CAGCTCTTCACATGGCTACT+CGG + chr1.4:16946241-16946260 MS.gene98973:CDS 50.0%
CCGAATCACATCGGAATGAG+AGG - chr1.4:16944920-16944939 None:intergenic 50.0%
CGGTTCCTCCTATTATCGTG+GGG + chr1.4:16944937-16944956 MS.gene98973:intron 50.0%
CGTGTAGGTATGGGACTACA+TGG - chr1.4:16944886-16944905 None:intergenic 50.0%
GATATCGAAAGCCACGACGT+GGG + chr1.4:16945019-16945038 MS.gene98973:intron 50.0%
GATCCTCCCAATTGCGGTTA+GGG + chr1.4:16945292-16945311 MS.gene98973:intron 50.0%
GATGACCCCACGATAATAGG+AGG - chr1.4:16944945-16944964 None:intergenic 50.0%
GGGAACCTTTCGTATCCAAC+TGG + chr1.4:16944993-16945012 MS.gene98973:intron 50.0%
GGGACTACATGGTTGAAGGA+AGG - chr1.4:16944875-16944894 None:intergenic 50.0%
GGGCAATACAGCTCTTCACA+TGG + chr1.4:16946233-16946252 MS.gene98973:CDS 50.0%
GTACTAGCCAAGAGACCAAG+TGG + chr1.4:16947193-16947212 MS.gene98973:CDS 50.0%
GTCTCTTGGCTAGTACTCTC+TGG - chr1.4:16947189-16947208 None:intergenic 50.0%
TCCGTACGGAGATTCATCTC+TGG + chr1.4:16946520-16946539 MS.gene98973:CDS 50.0%
TCTAGTTGCGATCGTGGTTG+TGG + chr1.4:16945170-16945189 MS.gene98973:intron 50.0%
TCTTAGGATGGGTGACCTTC+CGG - chr1.4:16944748-16944767 None:intergenic 50.0%
TGCACAATGCGGCTAGGTAT+GGG + chr1.4:16946043-16946062 MS.gene98973:CDS 50.0%
TGGAACGGGCATTATCCGTA+AGG - chr1.4:16944967-16944986 None:intergenic 50.0%
TTGATGTAACACCCACGTCG+TGG - chr1.4:16945033-16945052 None:intergenic 50.0%
TTGCACAATGCGGCTAGGTA+TGG + chr1.4:16946042-16946061 MS.gene98973:CDS 50.0%
! AATGTGGTGCCAAGAATGCC+AGG + chr1.4:16946564-16946583 MS.gene98973:CDS 50.0%
! CTTTGGTAGCTTGGGACACA+AGG + chr1.4:16946948-16946967 MS.gene98973:CDS 50.0%
AAGGTTCCCGCCAGTTGGAA+CGG - chr1.4:16944982-16945001 None:intergenic 55.0%
ACGCTTTCCGGGAAACTTCC+CGG + chr1.4:16944726-16944745 MS.gene98973:intron 55.0%
AGTCCCTAACCGCAATTGGG+AGG - chr1.4:16945298-16945317 None:intergenic 55.0%
ATATTCGCCTTCCCTGCCTC+CGG - chr1.4:16946842-16946861 None:intergenic 55.0%
CGATCCTCCCAATTGCGGTT+AGG + chr1.4:16945291-16945310 MS.gene98973:intron 55.0%
CGGAGTCCCTAACCGCAATT+GGG - chr1.4:16945301-16945320 None:intergenic 55.0%
CGGATAATGCCCGTTCCAAC+TGG + chr1.4:16944969-16944988 MS.gene98973:intron 55.0%
CTTAGGATGGGTGACCTTCC+GGG - chr1.4:16944747-16944766 None:intergenic 55.0%
GCTGCTAAGCGTGGCCATTT+GGG + chr1.4:16944533-16944552 MS.gene98973:CDS 55.0%
GCTTTCGATATCCCGCCAGT+TGG - chr1.4:16945011-16945030 None:intergenic 55.0%
GGATATCGAAAGCCACGACG+TGG + chr1.4:16945018-16945037 MS.gene98973:intron 55.0%
TAATGCCCGTTCCAACTGGC+GGG + chr1.4:16944973-16944992 MS.gene98973:intron 55.0%
TACGAAAGGTTCCCGCCAGT+TGG - chr1.4:16944987-16945006 None:intergenic 55.0%
TACTCGGAAAGCTCGTTCGC+AGG + chr1.4:16946257-16946276 MS.gene98973:CDS 55.0%
TCCCGCCAGTTGGATACGAA+AGG - chr1.4:16945001-16945020 None:intergenic 55.0%
TCGGAGTCCCTAACCGCAAT+TGG - chr1.4:16945302-16945321 None:intergenic 55.0%
TGACCTTCCGGGAAGTTTCC+CGG - chr1.4:16944736-16944755 None:intergenic 55.0%
TGCTGCTAAGCGTGGCCATT+TGG + chr1.4:16944532-16944551 MS.gene98973:CDS 55.0%
TTTCCGGGAAACTTCCCGGA+AGG + chr1.4:16944730-16944749 MS.gene98973:intron 55.0%
ACGGCTTGTGCGTGCACTTG+TGG + chr1.4:16947013-16947032 MS.gene98973:CDS 60.0%
AGAAAGCAACAGCCGGAGGC+AGG + chr1.4:16946827-16946846 MS.gene98973:CDS 60.0%
AGGTTCCCGCCAGTTGGAAC+GGG - chr1.4:16944981-16945000 None:intergenic 60.0%
ATCCGGAGGCCGTGTAGGTA+TGG - chr1.4:16944896-16944915 None:intergenic 60.0%
CTGCGTTGCACAATGCGGCT+AGG + chr1.4:16946037-16946056 MS.gene98973:CDS 60.0%
GAAAGCAACAGCCGGAGGCA+GGG + chr1.4:16946828-16946847 MS.gene98973:CDS 60.0%
GTCCTCACTCGCACGCTTTC+CGG + chr1.4:16944714-16944733 MS.gene98973:intron 60.0%
TCCCATACCTACACGGCCTC+CGG + chr1.4:16944891-16944910 MS.gene98973:intron 60.0%
TCCGGAGGCCGTGTAGGTAT+GGG - chr1.4:16944895-16944914 None:intergenic 60.0%
TCCTCACTCGCACGCTTTCC+GGG + chr1.4:16944715-16944734 MS.gene98973:intron 60.0%
TCGGAATGAGAGGGATCCGG+AGG - chr1.4:16944910-16944929 None:intergenic 60.0%
! TCCCGGAAAGCGTGCGAGTG+AGG - chr1.4:16944719-16944738 None:intergenic 65.0%
GAGGGATCCGGAGGCCGTGT+AGG - chr1.4:16944901-16944920 None:intergenic 70.0%
GCAACAGCCGGAGGCAGGGA+AGG + chr1.4:16946832-16946851 MS.gene98973:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 16944239 16947303 16944239 ID=MS.gene98973
chr1.4 mRNA 16944239 16947303 16944239 ID=MS.gene98973.t1;Parent=MS.gene98973
chr1.4 exon 16944239 16944554 16944239 ID=MS.gene98973.t1.exon1;Parent=MS.gene98973.t1
chr1.4 CDS 16944239 16944554 16944239 ID=cds.MS.gene98973.t1;Parent=MS.gene98973.t1
chr1.4 exon 16945869 16946278 16945869 ID=MS.gene98973.t1.exon2;Parent=MS.gene98973.t1
chr1.4 CDS 16945869 16946278 16945869 ID=cds.MS.gene98973.t1;Parent=MS.gene98973.t1
chr1.4 exon 16946431 16947303 16946431 ID=MS.gene98973.t1.exon3;Parent=MS.gene98973.t1
chr1.4 CDS 16946431 16947303 16946431 ID=cds.MS.gene98973.t1;Parent=MS.gene98973.t1
Gene Sequence

>MS.gene98973

ATGGATTCAAAGTCACTATGTTTCATGACCCACCAAGATATTTTCAATGTGGTTCGATCTGGTGATCTTGAAGGACTCAAAGAGGTGCTGAAACATGTTAACAAAGGTGAATCCTCAAATGGGCCATCATCATCAATTTCTGAATTCTTGTCCATGCAGAATGATGCTGGAGAAACGTTATTGTATATAGCTGCAGAAAATGGTGTTAACGATGTTTTCAGCTTCTTGTTAAGGTTATGTGATTTGGAGATACTCAAAATCAGGTCTAAATCTGATATGAATGCATTTCATGTTGCTGCTAAGCGTGGCCATTTGGGTATATTTTTTCTTTCATTTTGTTTGTAGTTATTCATTTTCATTCTTTTTCATCAATTGGGTACATTTTATTGATGGATCAAATGTAACATCCCATACTGCTTTTATTAGGATTGCCTACTAACCCCACAAACCAACACGAGTCTTTTCAGCGTGCTTTGTCCTCACTCGCACGCTTTCCGGGAAACTTCCCGGAAGGTCACCCATCCTAAGACTACTCCAAGTCAAGCACGCTTAACTGTGGAGTTCTTATGGAATGAGCTACCGAAAAGAAGATGCATCTTGTTGATATGGGTAGTACCTAACAATTCTTATAAGCCTTCCTTCAACCATGTAGTCCCATACCTACACGGCCTCCGGATCCCTCTCATTCCGATGTGATTCGGTTCCTCCTATTATCGTGGGGTCATCCTTACGGATAATGCCCGTTCCAACTGGCGGGAACCTTTCGTATCCAACTGGCGGGATATCGAAAGCCACGACGTGGGTGTTACATCAAACCTAGACATGATTTTTTTTTACTCCACTGTGCTAAACCATCAGAATAGTTTCTGATTTTTTGTTGTTGTTATATACATGTAGCATGCCATGTTTTAGAGTAATTTGTTCTTTTTATTCTAGTTGCGATCGTGGTTGTGGTTATGCTGCGAGCCTTTATATTGCGGAAAAATGTGGCTGATTAGGTCCAAATTGATGTCGCGATATCGTTGCAAGAGACCTAATGATTATGTATATTGCGATCCTCCCAATTGCGGTTAGGGACTCCGATTTTTTAAAATCATGTGATGGTTACAACTGCAATATCTGCTAGCTGCAGTATCTGCTACATATTCATAAGGTCTCACATGACAGGTCCTACAAAAGTAAAATATCAAGGCTAAGGGATAGTTACAACTTACAATGTTGTCAATCCTAGTTTGCGAAAATTCGGAGTTTGTTCAAATTTCGTGACGTGACAATGCTATAGTACTGACATAGCAGCTATATGAGTCTGACCACAATTTGTACTGAATTGCATATCATGAAATAACAGCAAGTTTGCGAAAATTCGGAGTTTGTTCAAATTTCGTGATGCGACAATGCTATAGCACTGACATAGCAGCTATATGAGTCTGACCACAATTTGTACTTAATTGCATATCATGAAATAACAGCAGTTTGTTAAAATTTCATTGCACTATAGTACCACTATTTCCGCTATTTGACAACACTGGATAGTTATCATGTTGCAAATTTGTATTCTTACTTCCCTTCAATATTGCTGATATTAAGGATTTCAATTATGAAAAGTTAAAATGTCAATCTTTTTTTCCAGAAATTGTGAGGGAGATTTTGAGTACTTGGCCTGAGGCTTGTAAGTTATGCGACTCCTCAAACACTAGTCCACTTTATTTAGCTGCTGTTCAAGACCATTTGGATGTGGTGAATGCTATTTTGGATGTTGATGTCAGTTCAATGATGATAGTAAGGAAAAACGGCAAAACTGCGTTGCACAATGCGGCTAGGTATGGGATCCTCCGTATCGTGAAAGCACTTATTGCAAGGGACTCAGCAATTGTTTGCATCAAAGATAAAAAGGGTCAAACAGCACTTCATATGGCTGTAAAAGGACAGTGTACTTCAGTAGTGGAGGAGATTTTACAAGCTGACCCAATGGTATTAAACGAAAAAGATAAGAAGGGCAATACAGCTCTTCACATGGCTACTCGGAAAGCTCGTTCGCAGGTCAATTAAACCATATTTGATTTCTGTTTTTTTACCCCATGGTTGCTTTGCTTCAGTTTTGTTATAAACTAGTTCATCCATTATTTTAGACCTGTGTATAATTATGTCATGTTCGTAGTTTTCTTGACACGTGGTTATCCTATCTATTTCAGATAGTGAGCTTTTTGTTAAGCTATGCATCTATGAATGTAAATGCAATCAATAATCAGCAAGAAACAGCCTTGGATTTGGCAGATAAACTTCCGTACGGAGATTCATCTCTGGAAATCAAGGAAGCCCTTTCTGAATGTGGTGCCAAGAATGCCAGGAATATAGGCAAACTGAATGAAGCCATGGAACTTAAAAGAGTGGTGAGTGATATAAAGCACGAGGTGCAGTCACAACTCGTACAGAACGAAAAAACTCGCAAACGAGTTTCTGGTATAGCTAAGGAATTGAGGAAAATTCATCGGGAAGCAATCCAAAACACCATAAATTCTGTCACAGTAGTTGCTGTCCTTTTTGCATCAATAGCATTCATGGCTTTGTTCAGTTTGCCAGGTCAATATAGAAAGCAACAGCCGGAGGCAGGGAAGGCGAATATAGCTCACGAAGTTGCCTTCAGTGCTTTCTGTCTTCTGAATGCCACGTCTCTTTTCATTTCTCTCGCAGTTGTTGTTGTTCAAATCACTTTGGTAGCTTGGGACACAAGGGCTCAAAGACAGATTGTGTCGGTGATTAACAAGCTAATGTGGACGGCTTGTGCGTGCACTTGTGGAGCTTTTCTCGCAATAGCTTTTGTGGTTGTTGGAAAGGAAAGATGGATGGCTACTACTGTAACCGTTTTGGGAACACCAATTCTAGTTGGGACTCTAGCATACTTGTGCTACTTTGTGTTCCGGCGACATTTTGGATTCCGAAGTGAATCCCAGAGAGTACTAGCCAAGAGACCAAGTGGAAGCAAATCATTCTCATGGTCTTACTCGGCACATATATCAGATGAGGAGGAGTATAATTCTGATGTTGAGAAGATATATGCTCTTTGA
Protein sequence

>MS.gene98973.t1

MDSKSLCFMTHQDIFNVVRSGDLEGLKEVLKHVNKGESSNGPSSSISEFLSMQNDAGETLLYIAAENGVNDVFSFLLRLCDLEILKIRSKSDMNAFHVAAKRGHLEIVREILSTWPEACKLCDSSNTSPLYLAAVQDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVKALIARDSAIVCIKDKKGQTALHMAVKGQCTSVVEEILQADPMVLNEKDKKGNTALHMATRKARSQIVSFLLSYASMNVNAINNQQETALDLADKLPYGDSSLEIKEALSECGAKNARNIGKLNEAMELKRVVSDIKHEVQSQLVQNEKTRKRVSGIAKELRKIHREAIQNTINSVTVVAVLFASIAFMALFSLPGQYRKQQPEAGKANIAHEVAFSAFCLLNATSLFISLAVVVVQITLVAWDTRAQRQIVSVINKLMWTACACTCGAFLAIAFVVVGKERWMATTVTVLGTPILVGTLAYLCYFVFRRHFGFRSESQRVLAKRPSGSKSFSWSYSAHISDEEEYNSDVEKIYAL