Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62686.t1 | XP_003630941.1 | 97.4 | 540 | 12 | 1 | 1 | 540 | 1 | 538 | 1.50E-184 | 656 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62686.t1 | Q9ZU96 | 76.7 | 541 | 116 | 5 | 1 | 540 | 1 | 532 | 5.6e-119 | 429.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62686.t1 | G7LAK9 | 97.4 | 540 | 12 | 1 | 1 | 540 | 1 | 538 | 1.1e-184 | 656.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04991 | MS.gene62686 | -0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene62686 | 0.814974 | 1.17E-51 | -1.69E-46 |
| MS.gene051541 | MS.gene62686 | 0.809788 | 1.59E-50 | -1.69E-46 |
| MS.gene052464 | MS.gene62686 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene62686 | 0.844131 | 9.14E-59 | -1.69E-46 |
| MS.gene052675 | MS.gene62686 | 0.841985 | 3.41E-58 | -1.69E-46 |
| MS.gene052677 | MS.gene62686 | 0.851928 | 6.45E-61 | -1.69E-46 |
| MS.gene055327 | MS.gene62686 | 0.82734 | 1.65E-54 | -1.69E-46 |
| MS.gene058081 | MS.gene62686 | 0.826943 | 2.06E-54 | -1.69E-46 |
| MS.gene058429 | MS.gene62686 | 0.832783 | 7.76E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene62686 | 0.845108 | 4.99E-59 | -1.69E-46 |
| MS.gene060851 | MS.gene62686 | 0.858115 | 1.03E-62 | -1.69E-46 |
| MS.gene060852 | MS.gene62686 | 0.858041 | 1.08E-62 | -1.69E-46 |
| MS.gene06121 | MS.gene62686 | 0.801921 | 7.17E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62686.t1 | MTR_8g105260 | 98.889 | 540 | 4 | 1 | 1 | 540 | 1 | 538 | 0.0 | 1098 |
| MS.gene62686.t1 | MTR_1g032100 | 76.895 | 541 | 114 | 4 | 1 | 540 | 1 | 531 | 0.0 | 860 |
| MS.gene62686.t1 | MTR_4g062100 | 46.341 | 451 | 228 | 5 | 56 | 496 | 61 | 507 | 1.65e-130 | 391 |
| MS.gene62686.t1 | MTR_2g096190 | 40.782 | 537 | 285 | 7 | 14 | 540 | 31 | 544 | 3.19e-129 | 388 |
| MS.gene62686.t1 | MTR_7g117620 | 44.286 | 490 | 253 | 8 | 56 | 540 | 72 | 546 | 3.10e-127 | 383 |
| MS.gene62686.t1 | MTR_1g115575 | 41.667 | 528 | 288 | 6 | 18 | 540 | 81 | 593 | 1.30e-125 | 380 |
| MS.gene62686.t1 | MTR_7g100390 | 43.636 | 495 | 259 | 5 | 54 | 540 | 38 | 520 | 4.31e-125 | 377 |
| MS.gene62686.t1 | MTR_7g100430 | 38.258 | 528 | 300 | 7 | 18 | 540 | 76 | 582 | 2.52e-103 | 322 |
| MS.gene62686.t1 | MTR_2g101310 | 24.943 | 441 | 256 | 9 | 100 | 470 | 138 | 573 | 5.63e-35 | 139 |
| MS.gene62686.t1 | MTR_3g105650 | 25.290 | 431 | 261 | 12 | 102 | 514 | 39 | 426 | 1.87e-25 | 109 |
| MS.gene62686.t1 | MTR_2g101320 | 23.570 | 437 | 261 | 7 | 100 | 468 | 138 | 569 | 1.57e-24 | 108 |
| MS.gene62686.t1 | MTR_2g101320 | 22.131 | 244 | 154 | 4 | 69 | 277 | 5 | 247 | 9.88e-11 | 64.7 |
| MS.gene62686.t1 | MTR_2g101310 | 33.516 | 182 | 119 | 2 | 100 | 279 | 138 | 319 | 2.57e-23 | 103 |
| MS.gene62686.t1 | MTR_1g069110 | 24.437 | 311 | 214 | 5 | 134 | 423 | 50 | 360 | 2.18e-19 | 91.3 |
| MS.gene62686.t1 | MTR_5g085810 | 23.789 | 454 | 293 | 10 | 49 | 469 | 252 | 685 | 7.65e-16 | 81.3 |
| MS.gene62686.t1 | MTR_8g467780 | 24.585 | 301 | 182 | 6 | 103 | 382 | 46 | 322 | 1.62e-15 | 79.3 |
| MS.gene62686.t1 | MTR_8g068990 | 24.561 | 342 | 207 | 9 | 103 | 422 | 47 | 359 | 7.71e-15 | 77.4 |
| MS.gene62686.t1 | MTR_3g085830 | 25.874 | 286 | 167 | 8 | 14 | 276 | 109 | 372 | 6.03e-14 | 75.1 |
| MS.gene62686.t1 | MTR_8g073260 | 24.138 | 290 | 183 | 5 | 103 | 380 | 46 | 310 | 7.77e-14 | 74.3 |
| MS.gene62686.t1 | MTR_8g039620 | 25.086 | 291 | 182 | 8 | 103 | 380 | 49 | 316 | 8.40e-14 | 73.9 |
| MS.gene62686.t1 | MTR_1g059930 | 26.351 | 296 | 169 | 9 | 103 | 380 | 47 | 311 | 3.29e-13 | 72.0 |
| MS.gene62686.t1 | MTR_5g085830 | 23.799 | 437 | 285 | 13 | 62 | 469 | 240 | 657 | 8.76e-13 | 71.6 |
| MS.gene62686.t1 | MTR_7g021090 | 27.907 | 215 | 133 | 5 | 103 | 304 | 44 | 249 | 1.08e-12 | 70.5 |
| MS.gene62686.t1 | MTR_8g072510 | 25.234 | 214 | 140 | 3 | 103 | 304 | 45 | 250 | 2.55e-12 | 69.3 |
| MS.gene62686.t1 | MTR_7g451420 | 25.789 | 190 | 128 | 2 | 103 | 280 | 44 | 232 | 6.19e-12 | 67.4 |
| MS.gene62686.t1 | MTR_8g066670 | 22.636 | 349 | 216 | 8 | 103 | 422 | 1110 | 1433 | 6.80e-12 | 68.9 |
| MS.gene62686.t1 | MTR_7g099570 | 26.291 | 213 | 145 | 5 | 103 | 304 | 44 | 255 | 2.61e-11 | 66.6 |
| MS.gene62686.t1 | MTR_3g016210 | 22.000 | 300 | 188 | 5 | 103 | 380 | 45 | 320 | 4.10e-11 | 65.5 |
| MS.gene62686.t1 | MTR_2g096760 | 27.273 | 220 | 128 | 9 | 62 | 260 | 11 | 219 | 7.62e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62686.t1 | AT2G01680 | 69.131 | 541 | 157 | 5 | 1 | 540 | 1 | 532 | 0.0 | 743 |
| MS.gene62686.t1 | AT1G07710 | 44.841 | 504 | 260 | 8 | 47 | 540 | 48 | 543 | 6.47e-129 | 387 |
| MS.gene62686.t1 | AT1G07710 | 44.841 | 504 | 260 | 8 | 47 | 540 | 48 | 543 | 6.47e-129 | 387 |
| MS.gene62686.t1 | AT2G31820 | 42.752 | 545 | 279 | 9 | 2 | 540 | 145 | 662 | 4.72e-125 | 381 |
| MS.gene62686.t1 | AT5G60070 | 42.801 | 507 | 258 | 8 | 21 | 515 | 43 | 529 | 1.14e-121 | 369 |
| MS.gene62686.t1 | AT1G05640 | 44.848 | 495 | 256 | 8 | 54 | 540 | 142 | 627 | 7.82e-121 | 369 |
| MS.gene62686.t1 | AT3G12360 | 40.190 | 525 | 296 | 6 | 18 | 540 | 70 | 578 | 1.78e-116 | 356 |
| MS.gene62686.t1 | AT3G12360 | 40.190 | 525 | 296 | 6 | 18 | 540 | 82 | 590 | 2.43e-116 | 356 |
| MS.gene62686.t1 | AT5G02620 | 42.324 | 482 | 249 | 5 | 24 | 492 | 27 | 492 | 1.05e-115 | 353 |
| MS.gene62686.t1 | AT5G02620 | 42.324 | 482 | 249 | 5 | 24 | 492 | 27 | 492 | 1.05e-115 | 353 |
| MS.gene62686.t1 | AT5G02620 | 42.324 | 482 | 249 | 5 | 24 | 492 | 27 | 492 | 1.05e-115 | 353 |
| MS.gene62686.t1 | AT3G09550 | 40.000 | 525 | 300 | 8 | 18 | 540 | 96 | 607 | 3.84e-112 | 346 |
| MS.gene62686.t1 | AT3G09550 | 40.000 | 525 | 300 | 8 | 18 | 540 | 96 | 607 | 3.84e-112 | 346 |
| MS.gene62686.t1 | AT3G09550 | 40.000 | 525 | 300 | 8 | 18 | 540 | 103 | 614 | 4.18e-112 | 346 |
| MS.gene62686.t1 | AT5G02620 | 40.594 | 505 | 248 | 6 | 24 | 492 | 27 | 515 | 6.82e-111 | 341 |
| MS.gene62686.t1 | AT5G02620 | 40.594 | 505 | 248 | 6 | 24 | 492 | 27 | 515 | 6.82e-111 | 341 |
| MS.gene62686.t1 | AT5G54710 | 27.105 | 487 | 311 | 12 | 57 | 506 | 94 | 573 | 2.26e-39 | 152 |
| MS.gene62686.t1 | AT5G54710 | 27.105 | 487 | 311 | 12 | 57 | 506 | 139 | 618 | 5.72e-39 | 151 |
| MS.gene62686.t1 | AT1G34050 | 26.020 | 392 | 264 | 8 | 112 | 494 | 162 | 536 | 3.86e-34 | 136 |
| MS.gene62686.t1 | AT2G24600 | 21.861 | 462 | 311 | 9 | 56 | 485 | 96 | 539 | 2.88e-31 | 128 |
| MS.gene62686.t1 | AT2G24600 | 21.861 | 462 | 311 | 9 | 56 | 485 | 96 | 539 | 2.88e-31 | 128 |
| MS.gene62686.t1 | AT1G10340 | 22.326 | 430 | 290 | 10 | 56 | 459 | 96 | 507 | 1.31e-25 | 111 |
| MS.gene62686.t1 | AT1G10340 | 22.526 | 475 | 276 | 11 | 67 | 459 | 39 | 503 | 2.28e-25 | 110 |
| MS.gene62686.t1 | AT5G51160 | 27.273 | 341 | 202 | 10 | 131 | 438 | 44 | 371 | 1.43e-22 | 100 |
| MS.gene62686.t1 | AT4G03460 | 25.077 | 323 | 205 | 5 | 105 | 422 | 205 | 495 | 3.36e-22 | 100 |
| MS.gene62686.t1 | AT4G03460 | 25.077 | 323 | 205 | 5 | 105 | 422 | 237 | 527 | 3.52e-22 | 100 |
| MS.gene62686.t1 | AT5G54700 | 24.716 | 352 | 206 | 10 | 163 | 505 | 26 | 327 | 5.96e-22 | 97.8 |
| MS.gene62686.t1 | AT1G03670 | 23.490 | 447 | 299 | 7 | 56 | 492 | 171 | 584 | 1.18e-21 | 99.4 |
| MS.gene62686.t1 | AT4G03500 | 22.588 | 425 | 282 | 7 | 62 | 477 | 212 | 598 | 1.63e-20 | 95.9 |
| MS.gene62686.t1 | AT4G03500 | 22.588 | 425 | 282 | 7 | 62 | 477 | 189 | 575 | 2.53e-20 | 95.1 |
| MS.gene62686.t1 | AT4G03500 | 22.588 | 425 | 282 | 7 | 62 | 477 | 189 | 575 | 2.53e-20 | 95.1 |
| MS.gene62686.t1 | AT4G10720 | 24.781 | 343 | 218 | 10 | 103 | 429 | 40 | 358 | 3.55e-19 | 90.5 |
| MS.gene62686.t1 | AT2G24600 | 23.416 | 363 | 234 | 8 | 56 | 392 | 96 | 440 | 3.91e-19 | 91.3 |
| MS.gene62686.t1 | AT2G24600 | 23.416 | 363 | 234 | 8 | 56 | 392 | 96 | 440 | 3.91e-19 | 91.3 |
| MS.gene62686.t1 | AT4G10720 | 28.509 | 228 | 147 | 4 | 103 | 316 | 40 | 265 | 4.84e-19 | 90.1 |
| MS.gene62686.t1 | AT4G03490 | 22.768 | 448 | 313 | 11 | 49 | 476 | 118 | 552 | 2.76e-18 | 88.6 |
| MS.gene62686.t1 | AT4G03490 | 22.768 | 448 | 313 | 11 | 49 | 476 | 128 | 562 | 2.76e-18 | 89.0 |
| MS.gene62686.t1 | AT4G03490 | 23.235 | 439 | 284 | 10 | 49 | 476 | 108 | 504 | 5.26e-18 | 88.2 |
| MS.gene62686.t1 | AT4G03490 | 23.235 | 439 | 284 | 10 | 49 | 476 | 118 | 514 | 5.37e-18 | 87.8 |
| MS.gene62686.t1 | AT4G03490 | 22.768 | 448 | 313 | 11 | 49 | 476 | 128 | 562 | 6.16e-18 | 87.8 |
| MS.gene62686.t1 | AT5G50140 | 23.094 | 446 | 280 | 14 | 65 | 456 | 27 | 463 | 1.91e-17 | 85.9 |
| MS.gene62686.t1 | AT4G03440 | 22.362 | 398 | 285 | 7 | 105 | 498 | 318 | 695 | 6.11e-17 | 84.7 |
| MS.gene62686.t1 | AT4G03440 | 22.362 | 398 | 285 | 7 | 105 | 498 | 311 | 688 | 6.62e-17 | 84.7 |
| MS.gene62686.t1 | AT4G03440 | 22.362 | 398 | 285 | 7 | 105 | 498 | 311 | 688 | 6.62e-17 | 84.7 |
| MS.gene62686.t1 | AT5G54700 | 31.126 | 151 | 100 | 2 | 343 | 489 | 200 | 350 | 3.55e-16 | 81.6 |
| MS.gene62686.t1 | AT4G03480 | 24.138 | 377 | 245 | 9 | 60 | 422 | 310 | 659 | 1.01e-15 | 80.9 |
| MS.gene62686.t1 | AT4G03480 | 24.138 | 377 | 245 | 9 | 60 | 422 | 307 | 656 | 1.13e-15 | 80.5 |
| MS.gene62686.t1 | AT5G15500 | 23.393 | 389 | 208 | 9 | 100 | 424 | 2 | 364 | 8.00e-15 | 77.4 |
| MS.gene62686.t1 | AT4G14390 | 22.014 | 427 | 291 | 8 | 56 | 472 | 220 | 614 | 1.46e-14 | 77.0 |
| MS.gene62686.t1 | AT4G14390 | 22.703 | 370 | 253 | 6 | 105 | 472 | 295 | 633 | 1.84e-14 | 77.0 |
| MS.gene62686.t1 | AT3G04140 | 28.472 | 288 | 174 | 7 | 14 | 276 | 106 | 386 | 2.00e-14 | 76.6 |
| MS.gene62686.t1 | AT1G14480 | 27.826 | 230 | 148 | 5 | 103 | 316 | 40 | 267 | 5.51e-14 | 74.7 |
| MS.gene62686.t1 | AT5G54610 | 24.199 | 281 | 183 | 6 | 103 | 372 | 40 | 301 | 8.43e-14 | 73.9 |
| MS.gene62686.t1 | AT4G14390 | 23.077 | 364 | 244 | 7 | 111 | 472 | 305 | 634 | 8.54e-14 | 74.7 |
| MS.gene62686.t1 | AT5G54620 | 25.806 | 186 | 126 | 2 | 103 | 276 | 40 | 225 | 8.94e-13 | 70.9 |
| MS.gene62686.t1 | AT1G14500 | 28.571 | 189 | 117 | 5 | 103 | 276 | 40 | 225 | 8.17e-11 | 64.7 |
Find 102 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGTGGTAAATGCTATTT+TGG | 0.194879 | 4.2:-1494467 | MS.gene62686:CDS |
| AAAACTCGCCGACGAGTTTC+CGG | 0.220434 | 4.2:-1493278 | MS.gene62686:CDS |
| CATATTCTGAAAGTGCTTCT+TGG | 0.231591 | 4.2:+1493408 | None:intergenic |
| GCTATTACCATAACTGGTTT+AGG | 0.239123 | 4.2:-1492870 | MS.gene62686:CDS |
| TTGGACTGCGGCTGCATATA+GGG | 0.263714 | 4.2:+1494498 | None:intergenic |
| TTTCGCCTCAATAGCATTCT+TGG | 0.274513 | 4.2:-1493177 | MS.gene62686:CDS |
| CAAGAAGCACTTTCAGAATA+TGG | 0.283596 | 4.2:-1493407 | MS.gene62686:CDS |
| TGGATGGCTATTACCATAAC+TGG | 0.303698 | 4.2:-1492876 | MS.gene62686:CDS |
| CTATTACCATAACTGGTTTA+GGG | 0.304499 | 4.2:-1492869 | MS.gene62686:CDS |
| ATCACATAATTTGATCAAAA+AGG | 0.308077 | 4.2:+1495122 | None:intergenic |
| AACCACTGTGACAGAGTTAA+TGG | 0.309857 | 4.2:+1493208 | None:intergenic |
| CTTGGACTGCGGCTGCATAT+AGG | 0.309917 | 4.2:+1494497 | None:intergenic |
| TGTTTCTTGTTGCTTATTGA+TGG | 0.315784 | 4.2:+1493481 | None:intergenic |
| TCTTTGATGCAAACTATTCC+TGG | 0.318592 | 4.2:+1494334 | None:intergenic |
| CTTGGCTATATTCAATTTGC+CGG | 0.319423 | 4.2:-1493159 | MS.gene62686:CDS |
| ACAAGAAACAGCCTTGGATT+TGG | 0.348845 | 4.2:-1493468 | MS.gene62686:CDS |
| TTCAAATCACTTTGGTAGCT+TGG | 0.363305 | 4.2:-1493016 | MS.gene62686:CDS |
| TTACCACATCCAAGTGATCT+TGG | 0.370317 | 4.2:+1494479 | None:intergenic |
| GCACTTATTGTCCGTGATCC+AGG | 0.413807 | 4.2:-1494352 | MS.gene62686:CDS |
| GCTGGATCTGGAGACCTTGA+TGG | 0.415271 | 4.2:-1495315 | MS.gene62686:CDS |
| TCAAATCACTTTGGTAGCTT+GGG | 0.417875 | 4.2:-1493015 | MS.gene62686:CDS |
| CTGCACTACATAATGCTGTT+AGG | 0.423394 | 4.2:-1494399 | MS.gene62686:CDS |
| TTTCAATTCCTTAGCTATAC+CGG | 0.426970 | 4.2:+1493259 | None:intergenic |
| ATATTCACCACAGCTGGATC+TGG | 0.428365 | 4.2:-1495327 | MS.gene62686:CDS |
| AGGTCAAACTGCGCTACATA+TGG | 0.431611 | 4.2:-1494305 | MS.gene62686:CDS |
| TAGGGATACCTATTCTAGTT+GGG | 0.436179 | 4.2:-1492851 | MS.gene62686:CDS |
| TCTCGTTCGTTCAATATAGT+AGG | 0.439653 | 4.2:+1494232 | None:intergenic |
| ACTGTTAGAGAAGCTTAATA+AGG | 0.441562 | 4.2:-1495283 | MS.gene62686:CDS |
| TTAGGGATACCTATTCTAGT+TGG | 0.455818 | 4.2:-1492852 | MS.gene62686:CDS |
| TGCGTCTCTGCGAATCACTT+TGG | 0.457508 | 4.2:+1492778 | None:intergenic |
| GAAGATGGTGATAGAAGTAA+TGG | 0.458453 | 4.2:-1495258 | MS.gene62686:CDS |
| AGGTATCCCTAAACCAGTTA+TGG | 0.460403 | 4.2:+1492863 | None:intergenic |
| GCAGCTAAGCGTGGCCATCT+TGG | 0.468196 | 4.2:-1495048 | MS.gene62686:intron |
| ATTATGAAAGGATCACATAT+AGG | 0.475016 | 4.2:-1493128 | MS.gene62686:CDS |
| AAGCTTAATAAGGAAGAAGA+TGG | 0.476184 | 4.2:-1495273 | MS.gene62686:CDS |
| ATTGAACGAACGAGATAAGA+AGG | 0.492542 | 4.2:-1494224 | MS.gene62686:CDS |
| CAATCAATATTCACCACAGC+TGG | 0.492782 | 4.2:-1495333 | MS.gene62686:CDS |
| ACAGTTTCTTCAACCCATCA+AGG | 0.495729 | 4.2:+1495301 | None:intergenic |
| TTGGCAGATAAACTGCCATA+TGG | 0.504776 | 4.2:-1493449 | MS.gene62686:CDS |
| AGACGCATCAAGAGAGCAAG+TGG | 0.505968 | 4.2:-1492762 | MS.gene62686:CDS |
| CTTTGGTAGCTTGGGACACA+AGG | 0.509015 | 4.2:-1493007 | MS.gene62686:CDS |
| CAATAAGTGCTTTCACAATA+CGG | 0.511144 | 4.2:+1494365 | None:intergenic |
| TCTAAAGCTGACGATCCATA+TGG | 0.511646 | 4.2:+1493434 | None:intergenic |
| GCCAGAGTCCCAACTAGAAT+AGG | 0.516542 | 4.2:+1492843 | None:intergenic |
| CCGGGTCAATATATTATGAA+AGG | 0.520442 | 4.2:-1493140 | MS.gene62686:CDS |
| TACGCGGAAAGGCCGGTCAC+AGG | 0.521929 | 4.2:-1494179 | MS.gene62686:intron |
| CTACATAATGCTGTTAGGTA+TGG | 0.523561 | 4.2:-1494394 | MS.gene62686:CDS |
| CTTCACATGGCTACGCGGAA+AGG | 0.523901 | 4.2:-1494190 | MS.gene62686:CDS |
| GTCACACAACTTACAAACCT+CGG | 0.525962 | 4.2:+1494537 | None:intergenic |
| CTGTTGTTAACAAGCTAATG+TGG | 0.526218 | 4.2:-1492965 | MS.gene62686:CDS |
| CTGGATCTGGAGACCTTGAT+GGG | 0.530769 | 4.2:-1495314 | MS.gene62686:CDS |
| AGAATGCTATTGAGGCGAAA+AGG | 0.530984 | 4.2:+1493180 | None:intergenic |
| TGGACTGCGGCTGCATATAG+GGG | 0.531665 | 4.2:+1494499 | None:intergenic |
| AACATCATCTTCATCTATGT+CGG | 0.533622 | 4.2:-1495229 | MS.gene62686:CDS |
| ACATGGCTACGCGGAAAGGC+CGG | 0.534860 | 4.2:-1494186 | MS.gene62686:CDS |
| ACCTATTCTAGTTGGGACTC+TGG | 0.537549 | 4.2:-1492844 | MS.gene62686:CDS |
| ACAGAGTACATCAGTGGTGG+AGG | 0.543153 | 4.2:-1494272 | MS.gene62686:CDS |
| TGCGGCTGCATATAGGGGAC+TGG | 0.546475 | 4.2:+1494504 | None:intergenic |
| TTGGCTATATTCAATTTGCC+GGG | 0.547911 | 4.2:-1493158 | MS.gene62686:CDS |
| CTGTGGTGAATATTGATTGG+TGG | 0.549448 | 4.2:+1495337 | None:intergenic |
| TAAGCAACAAGAAACAGCCT+TGG | 0.552301 | 4.2:-1493474 | MS.gene62686:CDS |
| CAACTTACAAACCTCGGGCC+AGG | 0.555562 | 4.2:+1494543 | None:intergenic |
| TATAGCCAAGAATGCTATTG+AGG | 0.559760 | 4.2:+1493172 | None:intergenic |
| TCTAACATTGCGGATCATGT+TGG | 0.560863 | 4.2:-1493101 | MS.gene62686:CDS |
| GCTAAATATGCAAGACATGT+TGG | 0.561894 | 4.2:-1493383 | MS.gene62686:CDS |
| GTGGAAGCAAATCCTTCTCA+TGG | 0.564022 | 4.2:-1492743 | MS.gene62686:CDS |
| TCACACAACTTACAAACCTC+GGG | 0.565097 | 4.2:+1494538 | None:intergenic |
| AAGATGGTGATAGAAGTAAT+GGG | 0.566107 | 4.2:-1495257 | MS.gene62686:CDS |
| AGCCGCAGTCCAAGATCACT+TGG | 0.570077 | 4.2:-1494488 | MS.gene62686:CDS |
| TGTTGTTGTTCAAATCACTT+TGG | 0.570912 | 4.2:-1493024 | MS.gene62686:CDS |
| CAGCTGTGGTGAATATTGAT+TGG | 0.574642 | 4.2:+1495334 | None:intergenic |
| TAGCTATACCGGAAACTCGT+CGG | 0.577902 | 4.2:+1493270 | None:intergenic |
| CAGTTTATCTGCCAAATCCA+AGG | 0.577959 | 4.2:+1493457 | None:intergenic |
| ATGTCTCTTCAAAATGATCA+TGG | 0.578765 | 4.2:-1495195 | MS.gene62686:CDS |
| GCGCTACATATGGCTGTCAA+AGG | 0.582666 | 4.2:-1494295 | MS.gene62686:CDS |
| GAATGAGTTTAACCTGTGAC+CGG | 0.583506 | 4.2:+1494167 | None:intergenic |
| GGGTAATACCGCTCTTCACA+TGG | 0.583634 | 4.2:-1494203 | MS.gene62686:CDS |
| CCTTTCATAATATATTGACC+CGG | 0.584046 | 4.2:+1493140 | None:intergenic |
| TTTCATGTTGCAGCTAAGCG+TGG | 0.587939 | 4.2:-1495057 | MS.gene62686:CDS |
| TTTGCTAAGCTATGCAGCTG+TGG | 0.589326 | 4.2:-1493513 | MS.gene62686:CDS |
| GCTGCTTGTGCTTGCACGTG+CGG | 0.591233 | 4.2:-1492942 | MS.gene62686:CDS |
| ACGAGTTTCCGGTATAGCTA+AGG | 0.593408 | 4.2:-1493267 | MS.gene62686:CDS |
| ATCCAAGTGATCTTGGACTG+CGG | 0.602312 | 4.2:+1494486 | None:intergenic |
| AGCTGCACACAATAATCTCA+AGG | 0.604525 | 4.2:-1495154 | MS.gene62686:CDS |
| TGTGGTGAATATTGATTGGT+GGG | 0.604833 | 4.2:+1495338 | None:intergenic |
| AGTCCAAGATCACTTGGATG+TGG | 0.606081 | 4.2:-1494482 | MS.gene62686:CDS |
| TGGTAAAGTAGATGAAGCCA+TGG | 0.615814 | 4.2:-1493363 | MS.gene62686:CDS |
| CCGCTCTTCACATGGCTACG+CGG | 0.621597 | 4.2:-1494195 | MS.gene62686:CDS |
| TTGAACGAACGAGATAAGAA+GGG | 0.622382 | 4.2:-1494223 | MS.gene62686:CDS |
| TGCAAACTATTCCTGGATCA+CGG | 0.623341 | 4.2:+1494341 | None:intergenic |
| TTGTGTGCAGCTATGTAAAG+TGG | 0.624900 | 4.2:+1495165 | None:intergenic |
| GAATAAGTAGAATACCAAGA+TGG | 0.625558 | 4.2:+1495034 | None:intergenic |
| TGTTGTTAACAAGCTAATGT+GGG | 0.633610 | 4.2:-1492964 | MS.gene62686:CDS |
| TGCAGAGTAAGACCATGAGA+AGG | 0.634865 | 4.2:+1492731 | None:intergenic |
| TTTGGTAGCTTGGGACACAA+GGG | 0.645817 | 4.2:-1493006 | MS.gene62686:CDS |
| AGGACAGAGTACATCAGTGG+TGG | 0.646873 | 4.2:-1494275 | MS.gene62686:CDS |
| AGTGAGTGATATAAAGCATG+AGG | 0.658021 | 4.2:-1493327 | MS.gene62686:CDS |
| CACCATTAACTCTGTCACAG+TGG | 0.670427 | 4.2:-1493210 | MS.gene62686:CDS |
| CCGCGTAGCCATGTGAAGAG+CGG | 0.680358 | 4.2:+1494195 | None:intergenic |
| CAAAGGACAGAGTACATCAG+TGG | 0.688738 | 4.2:-1494278 | MS.gene62686:CDS |
| AAGGTCTCCAGATCCAGCTG+TGG | 0.699168 | 4.2:+1495320 | None:intergenic |
| TATAGGAGAATCTAACATTG+CGG | 0.704490 | 4.2:-1493111 | MS.gene62686:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTTATAGTTAGAAAAAA+TGG | - | chr4.2:1493613-1493632 | MS.gene62686:intron | 15.0% |
| !! | ATTAATGAACTTTACAATTA+AGG | + | chr4.2:1493125-1493144 | None:intergenic | 15.0% |
| !! | TGTTTATAGTTAGAAAAAAT+GGG | - | chr4.2:1493614-1493633 | MS.gene62686:intron | 15.0% |
| !!! | ATTTTTTCTAACTATAAACA+TGG | + | chr4.2:1493614-1493633 | None:intergenic | 15.0% |
| !! | ATCACATAATTTGATCAAAA+AGG | + | chr4.2:1492921-1492940 | None:intergenic | 20.0% |
| !!! | AAAGTATCTACAACTATATA+TGG | + | chr4.2:1493906-1493925 | None:intergenic | 20.0% |
| !!! | TGTTGTACATCTTTTAAATT+TGG | - | chr4.2:1493249-1493268 | MS.gene62686:CDS | 20.0% |
| !!! | TTCTTTTTTTCTTTTGTGTT+TGG | - | chr4.2:1493036-1493055 | MS.gene62686:CDS | 20.0% |
| ! | AAAGACAAGCAAATTATGAA+AGG | + | chr4.2:1494427-1494446 | None:intergenic | 25.0% |
| ! | ACATTAATGTAAGTCTAATG+TGG | - | chr4.2:1494110-1494129 | MS.gene62686:intron | 25.0% |
| ! | AGGCTCATTTATATACATAA+TGG | - | chr4.2:1494381-1494400 | MS.gene62686:CDS | 25.0% |
| ! | ATTATGAAAGGATCACATAT+AGG | - | chr4.2:1494912-1494931 | MS.gene62686:intron | 25.0% |
| ! | CAACAAAAATACAAAATGAG+AGG | + | chr4.2:1494467-1494486 | None:intergenic | 25.0% |
| ! | CAATACTAGTTAATTACAAC+TGG | - | chr4.2:1494249-1494268 | MS.gene62686:CDS | 25.0% |
| ! | CTTACATTGCATAATTGTAA+TGG | - | chr4.2:1493358-1493377 | MS.gene62686:CDS | 25.0% |
| ! | GTTTGCATCAAAGATAAAAA+AGG | - | chr4.2:1493715-1493734 | MS.gene62686:intron | 25.0% |
| !! | TGTTTGGATATTGCTATTAT+TGG | - | chr4.2:1493052-1493071 | MS.gene62686:CDS | 25.0% |
| !!! | AAGATTGTAACATTTGCTAT+CGG | + | chr4.2:1493391-1493410 | None:intergenic | 25.0% |
| !!! | ATGCTTGAACTTTTTTCTAT+AGG | - | chr4.2:1494067-1494086 | MS.gene62686:intron | 25.0% |
| !!! | TTTGTTTTTCGACAACATTT+TGG | - | chr4.2:1495233-1495252 | MS.gene62686:CDS | 25.0% |
| AACATCATCTTCATCTATGT+CGG | - | chr4.2:1492811-1492830 | MS.gene62686:CDS | 30.0% | |
| AAGATGGTGATAGAAGTAAT+GGG | - | chr4.2:1492783-1492802 | MS.gene62686:CDS | 30.0% | |
| AAGCTTAATAAGGAAGAAGA+TGG | - | chr4.2:1492767-1492786 | MS.gene62686:CDS | 30.0% | |
| AATTTCATGTTAAACGTCGT+TGG | - | chr4.2:1494139-1494158 | MS.gene62686:intron | 30.0% | |
| ACTGTTAGAGAAGCTTAATA+AGG | - | chr4.2:1492757-1492776 | MS.gene62686:CDS | 30.0% | |
| AGGTTGTTGGAAAGAAAAAA+TGG | - | chr4.2:1495144-1495163 | MS.gene62686:CDS | 30.0% | |
| ATAAGGAATGAGGATAGTTT+AGG | + | chr4.2:1494355-1494374 | None:intergenic | 30.0% | |
| ATGTCTCTTCAAAATGATCA+TGG | - | chr4.2:1492845-1492864 | MS.gene62686:CDS | 30.0% | |
| CAATAAGTGCTTTCACAATA+CGG | + | chr4.2:1493678-1493697 | None:intergenic | 30.0% | |
| CCTTTCATAATATATTGACC+CGG | + | chr4.2:1494903-1494922 | None:intergenic | 30.0% | |
| GAATAAGTAGAATACCAAGA+TGG | + | chr4.2:1493009-1493028 | None:intergenic | 30.0% | |
| TAAATGAGCCTCAACTAATA+AGG | + | chr4.2:1494372-1494391 | None:intergenic | 30.0% | |
| TAAGGAATGAGGATAGTTTA+GGG | + | chr4.2:1494354-1494373 | None:intergenic | 30.0% | |
| TATAGGAGAATCTAACATTG+CGG | - | chr4.2:1494929-1494948 | MS.gene62686:intron | 30.0% | |
| TCTACTTACTAGGATAGAAT+TGG | - | chr4.2:1493323-1493342 | MS.gene62686:CDS | 30.0% | |
| TGTTGGAAAGAAAAAATGGA+TGG | - | chr4.2:1495148-1495167 | MS.gene62686:CDS | 30.0% | |
| TGTTGTTAACAAGCTAATGT+GGG | - | chr4.2:1495076-1495095 | MS.gene62686:CDS | 30.0% | |
| TTCAATTACACGAAGTTTCA+GGG | - | chr4.2:1493153-1493172 | MS.gene62686:CDS | 30.0% | |
| TTGTTGTCTTTACTGACAAA+TGG | - | chr4.2:1494481-1494500 | MS.gene62686:CDS | 30.0% | |
| TTTCAATTCCTTAGCTATAC+CGG | + | chr4.2:1494784-1494803 | None:intergenic | 30.0% | |
| ! | CTATTACCATAACTGGTTTA+GGG | - | chr4.2:1495171-1495190 | MS.gene62686:CDS | 30.0% |
| ! | TGTTGTTGTTCAAATCACTT+TGG | - | chr4.2:1495016-1495035 | MS.gene62686:intron | 30.0% |
| ! | TGTTTCTTGTTGCTTATTGA+TGG | + | chr4.2:1494562-1494581 | None:intergenic | 30.0% |
| !!! | ACTTTTTTCCAGATATTGTG+AGG | - | chr4.2:1493461-1493480 | MS.gene62686:CDS | 30.0% |
| !!! | CTTTTTTCCAGATATTGTGA+GGG | - | chr4.2:1493462-1493481 | MS.gene62686:CDS | 30.0% |
| AAAATCTCCCTCACAATATC+TGG | + | chr4.2:1493472-1493491 | None:intergenic | 35.0% | |
| AGTGAGTGATATAAAGCATG+AGG | - | chr4.2:1494713-1494732 | MS.gene62686:intron | 35.0% | |
| ATTGAACGAACGAGATAAGA+AGG | - | chr4.2:1493816-1493835 | MS.gene62686:intron | 35.0% | |
| ATTGGATGAACTGTGTTTCA+GGG | - | chr4.2:1493070-1493089 | MS.gene62686:CDS | 35.0% | |
| CATGTGAAGATCTACTTACT+AGG | - | chr4.2:1493313-1493332 | MS.gene62686:CDS | 35.0% | |
| CCGGGTCAATATATTATGAA+AGG | - | chr4.2:1494900-1494919 | MS.gene62686:intron | 35.0% | |
| CTACATAATGCTGTTAGGTA+TGG | - | chr4.2:1493646-1493665 | MS.gene62686:intron | 35.0% | |
| CTGTTGTTAACAAGCTAATG+TGG | - | chr4.2:1495075-1495094 | MS.gene62686:CDS | 35.0% | |
| CTTGGCTATATTCAATTTGC+CGG | - | chr4.2:1494881-1494900 | MS.gene62686:intron | 35.0% | |
| GAAGATGGTGATAGAAGTAA+TGG | - | chr4.2:1492782-1492801 | MS.gene62686:CDS | 35.0% | |
| GCTAAATATGCAAGACATGT+TGG | - | chr4.2:1494657-1494676 | MS.gene62686:intron | 35.0% | |
| GGCTGTGTAAATTTAAGCTA+TGG | - | chr4.2:1494308-1494327 | MS.gene62686:CDS | 35.0% | |
| GTTCAATTACACGAAGTTTC+AGG | - | chr4.2:1493152-1493171 | MS.gene62686:CDS | 35.0% | |
| TATAGCCAAGAATGCTATTG+AGG | + | chr4.2:1494871-1494890 | None:intergenic | 35.0% | |
| TATTGGATGAACTGTGTTTC+AGG | - | chr4.2:1493069-1493088 | MS.gene62686:CDS | 35.0% | |
| TCCTCATTCCTTATTAGTTG+AGG | - | chr4.2:1494361-1494380 | MS.gene62686:CDS | 35.0% | |
| TCTCGTTCGTTCAATATAGT+AGG | + | chr4.2:1493811-1493830 | None:intergenic | 35.0% | |
| TCTTTGATGCAAACTATTCC+TGG | + | chr4.2:1493709-1493728 | None:intergenic | 35.0% | |
| TTAGGGATACCTATTCTAGT+TGG | - | chr4.2:1495188-1495207 | MS.gene62686:CDS | 35.0% | |
| TTGAACGAACGAGATAAGAA+GGG | - | chr4.2:1493817-1493836 | MS.gene62686:intron | 35.0% | |
| TTGGCTATATTCAATTTGCC+GGG | - | chr4.2:1494882-1494901 | MS.gene62686:intron | 35.0% | |
| ! | CTTGGATTTTTCCATCATCT+CGG | + | chr4.2:1493981-1494000 | None:intergenic | 35.0% |
| ! | GCTATTACCATAACTGGTTT+AGG | - | chr4.2:1495170-1495189 | MS.gene62686:CDS | 35.0% |
| ! | TAACTAGTATTGAGAACTCG+TGG | + | chr4.2:1494241-1494260 | None:intergenic | 35.0% |
| ! | TAGGGATACCTATTCTAGTT+GGG | - | chr4.2:1495189-1495208 | MS.gene62686:CDS | 35.0% |
| ! | TCAAATCACTTTGGTAGCTT+GGG | - | chr4.2:1495025-1495044 | MS.gene62686:intron | 35.0% |
| ! | TGTGGTGAATATTGATTGGT+GGG | + | chr4.2:1492705-1492724 | None:intergenic | 35.0% |
| ! | TTCAAATCACTTTGGTAGCT+TGG | - | chr4.2:1495024-1495043 | MS.gene62686:intron | 35.0% |
| !! | CAAGAAGCACTTTCAGAATA+TGG | - | chr4.2:1494633-1494652 | MS.gene62686:intron | 35.0% |
| !! | CATATTCTGAAAGTGCTTCT+TGG | + | chr4.2:1494635-1494654 | None:intergenic | 35.0% |
| !! | GGATGTGGTAAATGCTATTT+TGG | - | chr4.2:1493573-1493592 | MS.gene62686:intron | 35.0% |
| !!! | CACTGTTCTTTTAAGTTCCA+TGG | + | chr4.2:1494697-1494716 | None:intergenic | 35.0% |
| !!! | GGTCTTGGATTTTAAAGCAT+AGG | - | chr4.2:1494287-1494306 | MS.gene62686:CDS | 35.0% |
| !!! | TTTTTTGGCAATCGCTTTTG+AGG | - | chr4.2:1495124-1495143 | MS.gene62686:CDS | 35.0% |
| AACCACTGTGACAGAGTTAA+TGG | + | chr4.2:1494835-1494854 | None:intergenic | 40.0% | |
| ACAAGAAACAGCCTTGGATT+TGG | - | chr4.2:1494572-1494591 | MS.gene62686:intron | 40.0% | |
| ACAGTTTCTTCAACCCATCA+AGG | + | chr4.2:1492742-1492761 | None:intergenic | 40.0% | |
| AGAATGCTATTGAGGCGAAA+AGG | + | chr4.2:1494863-1494882 | None:intergenic | 40.0% | |
| AGCTGCACACAATAATCTCA+AGG | - | chr4.2:1492886-1492905 | MS.gene62686:CDS | 40.0% | |
| AGGTATCCCTAAACCAGTTA+TGG | + | chr4.2:1495180-1495199 | None:intergenic | 40.0% | |
| CAATCAATATTCACCACAGC+TGG | - | chr4.2:1492707-1492726 | MS.gene62686:CDS | 40.0% | |
| CAGCTGTGGTGAATATTGAT+TGG | + | chr4.2:1492709-1492728 | None:intergenic | 40.0% | |
| CAGTTTATCTGCCAAATCCA+AGG | + | chr4.2:1494586-1494605 | None:intergenic | 40.0% | |
| CTGCACTACATAATGCTGTT+AGG | - | chr4.2:1493641-1493660 | MS.gene62686:intron | 40.0% | |
| GAATGAGTTTAACCTGTGAC+CGG | + | chr4.2:1493876-1493895 | None:intergenic | 40.0% | |
| GACTTCCTGGAATGAATGAT+AGG | - | chr4.2:1494000-1494019 | MS.gene62686:intron | 40.0% | |
| GCCTCAACTAATAAGGAATG+AGG | + | chr4.2:1494365-1494384 | None:intergenic | 40.0% | |
| GTCACACAACTTACAAACCT+CGG | + | chr4.2:1493506-1493525 | None:intergenic | 40.0% | |
| TAAGCAACAAGAAACAGCCT+TGG | - | chr4.2:1494566-1494585 | MS.gene62686:CDS | 40.0% | |
| TCACACAACTTACAAACCTC+GGG | + | chr4.2:1493505-1493524 | None:intergenic | 40.0% | |
| TCATTCATTCCAGGAAGTCT+TGG | + | chr4.2:1493999-1494018 | None:intergenic | 40.0% | |
| TCCTGGAATGAATGATAGGA+AGG | - | chr4.2:1494004-1494023 | MS.gene62686:intron | 40.0% | |
| TCCTTCCTATCATTCATTCC+AGG | + | chr4.2:1494008-1494027 | None:intergenic | 40.0% | |
| TCTAACATTGCGGATCATGT+TGG | - | chr4.2:1494939-1494958 | MS.gene62686:intron | 40.0% | |
| TGCAAACTATTCCTGGATCA+CGG | + | chr4.2:1493702-1493721 | None:intergenic | 40.0% | |
| TGGAAAAATCCAAGACTTCC+TGG | - | chr4.2:1493987-1494006 | MS.gene62686:intron | 40.0% | |
| TGGATGGCTATTACCATAAC+TGG | - | chr4.2:1495164-1495183 | MS.gene62686:CDS | 40.0% | |
| TGGTAAAGTAGATGAAGCCA+TGG | - | chr4.2:1494677-1494696 | MS.gene62686:intron | 40.0% | |
| TTACCACATCCAAGTGATCT+TGG | + | chr4.2:1493564-1493583 | None:intergenic | 40.0% | |
| TTGGCAGATAAACTGCCATA+TGG | - | chr4.2:1494591-1494610 | MS.gene62686:intron | 40.0% | |
| TTGTGTGCAGCTATGTAAAG+TGG | + | chr4.2:1492878-1492897 | None:intergenic | 40.0% | |
| TTTCGCCTCAATAGCATTCT+TGG | - | chr4.2:1494863-1494882 | MS.gene62686:intron | 40.0% | |
| ! | AAGCATCATATCACTGGTCT+TGG | - | chr4.2:1494272-1494291 | MS.gene62686:CDS | 40.0% |
| ! | CTGTGGTGAATATTGATTGG+TGG | + | chr4.2:1492706-1492725 | None:intergenic | 40.0% |
| ! | TCTAAAGCTGACGATCCATA+TGG | + | chr4.2:1494609-1494628 | None:intergenic | 40.0% |
| !! | AACTGGAAGCATCATATCAC+TGG | - | chr4.2:1494266-1494285 | MS.gene62686:CDS | 40.0% |
| AAGTTGTCAGTCCGAGATGA+TGG | - | chr4.2:1493967-1493986 | MS.gene62686:intron | 45.0% | |
| ACGAGTTTCCGGTATAGCTA+AGG | - | chr4.2:1494773-1494792 | MS.gene62686:intron | 45.0% | |
| AGGTCAAACTGCGCTACATA+TGG | - | chr4.2:1493735-1493754 | MS.gene62686:intron | 45.0% | |
| AGTCCAAGATCACTTGGATG+TGG | - | chr4.2:1493558-1493577 | MS.gene62686:intron | 45.0% | |
| ATATTCACCACAGCTGGATC+TGG | - | chr4.2:1492713-1492732 | MS.gene62686:CDS | 45.0% | |
| ATCCAAGTGATCTTGGACTG+CGG | + | chr4.2:1493557-1493576 | None:intergenic | 45.0% | |
| CAAAGGACAGAGTACATCAG+TGG | - | chr4.2:1493762-1493781 | MS.gene62686:intron | 45.0% | |
| CACCATTAACTCTGTCACAG+TGG | - | chr4.2:1494830-1494849 | MS.gene62686:intron | 45.0% | |
| GTGGAAGCAAATCCTTCTCA+TGG | - | chr4.2:1495297-1495316 | MS.gene62686:CDS | 45.0% | |
| TAGCTATACCGGAAACTCGT+CGG | + | chr4.2:1494773-1494792 | None:intergenic | 45.0% | |
| TGCAGAGTAAGACCATGAGA+AGG | + | chr4.2:1495312-1495331 | None:intergenic | 45.0% | |
| TTTCATGTTGCAGCTAAGCG+TGG | - | chr4.2:1492983-1493002 | MS.gene62686:CDS | 45.0% | |
| TTTGCTAAGCTATGCAGCTG+TGG | - | chr4.2:1494527-1494546 | MS.gene62686:CDS | 45.0% | |
| ! | ACCTATTCTAGTTGGGACTC+TGG | - | chr4.2:1495196-1495215 | MS.gene62686:CDS | 45.0% |
| ! | TTTGGTAGCTTGGGACACAA+GGG | - | chr4.2:1495034-1495053 | MS.gene62686:intron | 45.0% |
| !!! | GCAATCGCTTTTGAGGTTGT+TGG | - | chr4.2:1495131-1495150 | MS.gene62686:CDS | 45.0% |
| AAAACTCGCCGACGAGTTTC+CGG | - | chr4.2:1494762-1494781 | MS.gene62686:intron | 50.0% | |
| ACAGAGTACATCAGTGGTGG+AGG | - | chr4.2:1493768-1493787 | MS.gene62686:intron | 50.0% | |
| AGACGCATCAAGAGAGCAAG+TGG | - | chr4.2:1495278-1495297 | MS.gene62686:CDS | 50.0% | |
| AGGACAGAGTACATCAGTGG+TGG | - | chr4.2:1493765-1493784 | MS.gene62686:intron | 50.0% | |
| CTGGATCTGGAGACCTTGAT+GGG | - | chr4.2:1492726-1492745 | MS.gene62686:CDS | 50.0% | |
| GCACTTATTGTCCGTGATCC+AGG | - | chr4.2:1493688-1493707 | MS.gene62686:intron | 50.0% | |
| GCCAGAGTCCCAACTAGAAT+AGG | + | chr4.2:1495200-1495219 | None:intergenic | 50.0% | |
| GCGCTACATATGGCTGTCAA+AGG | - | chr4.2:1493745-1493764 | MS.gene62686:intron | 50.0% | |
| GGGTAATACCGCTCTTCACA+TGG | - | chr4.2:1493837-1493856 | MS.gene62686:intron | 50.0% | |
| TGCGTCTCTGCGAATCACTT+TGG | + | chr4.2:1495265-1495284 | None:intergenic | 50.0% | |
| TTGGACTGCGGCTGCATATA+GGG | + | chr4.2:1493545-1493564 | None:intergenic | 50.0% | |
| ! | CTTTGGTAGCTTGGGACACA+AGG | - | chr4.2:1495033-1495052 | MS.gene62686:intron | 50.0% |
| !! | TGAGGGAGATTTTGAGTGCC+TGG | - | chr4.2:1493479-1493498 | MS.gene62686:CDS | 50.0% |
| AAGGTCTCCAGATCCAGCTG+TGG | + | chr4.2:1492723-1492742 | None:intergenic | 55.0% | |
| AGCCGCAGTCCAAGATCACT+TGG | - | chr4.2:1493552-1493571 | MS.gene62686:intron | 55.0% | |
| CAACTTACAAACCTCGGGCC+AGG | + | chr4.2:1493500-1493519 | None:intergenic | 55.0% | |
| CTTCACATGGCTACGCGGAA+AGG | - | chr4.2:1493850-1493869 | MS.gene62686:intron | 55.0% | |
| CTTGGACTGCGGCTGCATAT+AGG | + | chr4.2:1493546-1493565 | None:intergenic | 55.0% | |
| GAGAACTCGTGGAACGTACG+AGG | + | chr4.2:1494230-1494249 | None:intergenic | 55.0% | |
| GCTGGATCTGGAGACCTTGA+TGG | - | chr4.2:1492725-1492744 | MS.gene62686:CDS | 55.0% | |
| TGGACTGCGGCTGCATATAG+GGG | + | chr4.2:1493544-1493563 | None:intergenic | 55.0% | |
| !!! | TTGCACGTGCGGCGCTTTTT+TGG | - | chr4.2:1495109-1495128 | MS.gene62686:CDS | 55.0% |
| ACATGGCTACGCGGAAAGGC+CGG | - | chr4.2:1493854-1493873 | MS.gene62686:intron | 60.0% | |
| CCGCGTAGCCATGTGAAGAG+CGG | + | chr4.2:1493848-1493867 | None:intergenic | 60.0% | |
| CCGCTCTTCACATGGCTACG+CGG | - | chr4.2:1493845-1493864 | MS.gene62686:intron | 60.0% | |
| GCAGCTAAGCGTGGCCATCT+TGG | - | chr4.2:1492992-1493011 | MS.gene62686:CDS | 60.0% | |
| GCTGCTTGTGCTTGCACGTG+CGG | - | chr4.2:1495098-1495117 | MS.gene62686:CDS | 60.0% | |
| TGCGGCTGCATATAGGGGAC+TGG | + | chr4.2:1493539-1493558 | None:intergenic | 60.0% | |
| !! | GATTTTGAGTGCCTGGCCCG+AGG | - | chr4.2:1493486-1493505 | MS.gene62686:CDS | 60.0% |
| TACGCGGAAAGGCCGGTCAC+AGG | - | chr4.2:1493861-1493880 | MS.gene62686:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 1492674 | 1495388 | 1492674 | ID=MS.gene62686 |
| chr4.2 | mRNA | 1492674 | 1495388 | 1492674 | ID=MS.gene62686.t1;Parent=MS.gene62686 |
| chr4.2 | exon | 1495049 | 1495388 | 1495049 | ID=MS.gene62686.t1.exon1;Parent=MS.gene62686.t1 |
| chr4.2 | CDS | 1495049 | 1495388 | 1495049 | ID=cds.MS.gene62686.t1;Parent=MS.gene62686.t1 |
| chr4.2 | exon | 1494180 | 1494589 | 1494180 | ID=MS.gene62686.t1.exon2;Parent=MS.gene62686.t1 |
| chr4.2 | CDS | 1494180 | 1494589 | 1494180 | ID=cds.MS.gene62686.t1;Parent=MS.gene62686.t1 |
| chr4.2 | exon | 1492674 | 1493546 | 1492674 | ID=MS.gene62686.t1.exon3;Parent=MS.gene62686.t1 |
| chr4.2 | CDS | 1492674 | 1493546 | 1492674 | ID=cds.MS.gene62686.t1;Parent=MS.gene62686.t1 |
| Gene Sequence |
| Protein sequence |