Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83067.t1 | XP_013466552.1 | 97.7 | 532 | 11 | 1 | 1 | 532 | 1 | 531 | 1.70E-180 | 642.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83067.t1 | Q9ZU96 | 74.2 | 535 | 132 | 4 | 1 | 532 | 1 | 532 | 4.2e-111 | 403.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83067.t1 | G8A009 | 97.7 | 532 | 11 | 1 | 1 | 532 | 1 | 531 | 1.2e-180 | 642.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83067.t1 | MTR_1g032100 | 97.744 | 532 | 11 | 1 | 1 | 532 | 1 | 531 | 0.0 | 1071 |
MS.gene83067.t1 | MTR_8g105260 | 76.994 | 539 | 116 | 4 | 1 | 532 | 1 | 538 | 0.0 | 833 |
MS.gene83067.t1 | MTR_2g096190 | 43.321 | 524 | 272 | 8 | 19 | 532 | 36 | 544 | 4.56e-132 | 395 |
MS.gene83067.t1 | MTR_7g117620 | 44.123 | 519 | 261 | 9 | 19 | 532 | 52 | 546 | 1.23e-131 | 394 |
MS.gene83067.t1 | MTR_4g062100 | 44.720 | 483 | 243 | 8 | 14 | 485 | 35 | 504 | 8.50e-131 | 392 |
MS.gene83067.t1 | MTR_1g115575 | 45.549 | 483 | 244 | 7 | 53 | 532 | 127 | 593 | 6.27e-128 | 386 |
MS.gene83067.t1 | MTR_7g100390 | 41.176 | 527 | 282 | 6 | 14 | 532 | 14 | 520 | 2.28e-126 | 379 |
MS.gene83067.t1 | MTR_7g100430 | 43.542 | 480 | 253 | 6 | 54 | 532 | 120 | 582 | 1.83e-110 | 340 |
MS.gene83067.t1 | MTR_2g101310 | 24.490 | 441 | 251 | 8 | 92 | 460 | 138 | 568 | 9.58e-31 | 127 |
MS.gene83067.t1 | MTR_2g101320 | 22.883 | 437 | 264 | 5 | 92 | 460 | 138 | 569 | 3.88e-26 | 113 |
MS.gene83067.t1 | MTR_2g101310 | 30.220 | 182 | 125 | 1 | 92 | 271 | 138 | 319 | 2.72e-23 | 103 |
MS.gene83067.t1 | MTR_3g105650 | 24.866 | 374 | 226 | 9 | 94 | 450 | 39 | 374 | 1.16e-22 | 100 |
MS.gene83067.t1 | MTR_1g069110 | 26.923 | 312 | 205 | 6 | 126 | 415 | 50 | 360 | 1.05e-20 | 95.5 |
MS.gene83067.t1 | MTR_5g085810 | 23.146 | 445 | 289 | 10 | 49 | 461 | 262 | 685 | 8.90e-18 | 87.4 |
MS.gene83067.t1 | MTR_8g073260 | 26.623 | 308 | 177 | 9 | 95 | 385 | 46 | 321 | 3.45e-17 | 84.3 |
MS.gene83067.t1 | MTR_8g068990 | 24.047 | 341 | 210 | 7 | 95 | 414 | 47 | 359 | 7.29e-16 | 80.5 |
MS.gene83067.t1 | MTR_1g059930 | 24.662 | 296 | 174 | 8 | 95 | 372 | 47 | 311 | 1.90e-14 | 75.9 |
MS.gene83067.t1 | MTR_8g039620 | 24.342 | 304 | 194 | 7 | 95 | 386 | 49 | 328 | 2.82e-14 | 75.5 |
MS.gene83067.t1 | MTR_8g040930 | 22.190 | 347 | 203 | 9 | 103 | 412 | 2 | 318 | 5.19e-14 | 74.3 |
MS.gene83067.t1 | MTR_8g041240 | 22.190 | 347 | 203 | 9 | 103 | 412 | 2 | 318 | 5.19e-14 | 74.3 |
MS.gene83067.t1 | MTR_7g021090 | 26.794 | 209 | 133 | 3 | 95 | 291 | 44 | 244 | 6.54e-14 | 73.9 |
MS.gene83067.t1 | MTR_7g099570 | 28.169 | 213 | 141 | 5 | 95 | 296 | 44 | 255 | 6.78e-14 | 74.7 |
MS.gene83067.t1 | MTR_5g085480 | 21.839 | 522 | 343 | 12 | 9 | 483 | 1 | 504 | 9.24e-14 | 74.3 |
MS.gene83067.t1 | MTR_5g085830 | 22.851 | 442 | 283 | 14 | 54 | 461 | 240 | 657 | 1.72e-13 | 73.6 |
MS.gene83067.t1 | MTR_3g016210 | 23.669 | 338 | 199 | 10 | 64 | 372 | 13 | 320 | 1.83e-13 | 72.8 |
MS.gene83067.t1 | MTR_5g085480 | 22.177 | 496 | 321 | 12 | 35 | 483 | 187 | 664 | 2.44e-13 | 73.2 |
MS.gene83067.t1 | MTR_3g085830 | 26.071 | 280 | 166 | 10 | 14 | 268 | 109 | 372 | 3.75e-13 | 72.4 |
MS.gene83067.t1 | MTR_8g069880 | 22.564 | 390 | 233 | 10 | 60 | 412 | 6 | 363 | 5.63e-13 | 71.6 |
MS.gene83067.t1 | MTR_2g096760 | 26.050 | 238 | 143 | 9 | 54 | 274 | 11 | 232 | 1.33e-12 | 70.1 |
MS.gene83067.t1 | MTR_2g033050 | 28.340 | 247 | 165 | 7 | 35 | 272 | 142 | 385 | 2.15e-11 | 66.2 |
MS.gene83067.t1 | MTR_8g066670 | 21.684 | 392 | 215 | 11 | 89 | 414 | 1068 | 1433 | 2.93e-11 | 67.0 |
MS.gene83067.t1 | MTR_8g080080 | 27.225 | 191 | 119 | 4 | 76 | 248 | 205 | 393 | 7.82e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83067.t1 | AT2G01680 | 67.290 | 535 | 169 | 4 | 1 | 532 | 1 | 532 | 0.0 | 716 |
MS.gene83067.t1 | AT2G31820 | 44.038 | 520 | 268 | 7 | 19 | 532 | 160 | 662 | 2.05e-130 | 395 |
MS.gene83067.t1 | AT1G05640 | 43.378 | 521 | 273 | 7 | 19 | 532 | 122 | 627 | 3.74e-126 | 382 |
MS.gene83067.t1 | AT1G07710 | 42.500 | 520 | 279 | 8 | 26 | 532 | 31 | 543 | 3.42e-125 | 377 |
MS.gene83067.t1 | AT1G07710 | 42.500 | 520 | 279 | 8 | 26 | 532 | 31 | 543 | 3.42e-125 | 377 |
MS.gene83067.t1 | AT5G60070 | 44.055 | 513 | 260 | 10 | 14 | 509 | 36 | 538 | 1.79e-123 | 373 |
MS.gene83067.t1 | AT3G09550 | 41.905 | 525 | 276 | 6 | 21 | 532 | 106 | 614 | 6.93e-122 | 371 |
MS.gene83067.t1 | AT3G09550 | 41.905 | 525 | 276 | 6 | 21 | 532 | 99 | 607 | 9.50e-122 | 370 |
MS.gene83067.t1 | AT3G09550 | 41.905 | 525 | 276 | 6 | 21 | 532 | 99 | 607 | 9.50e-122 | 370 |
MS.gene83067.t1 | AT3G12360 | 41.651 | 521 | 280 | 8 | 21 | 532 | 73 | 578 | 8.88e-121 | 367 |
MS.gene83067.t1 | AT3G12360 | 41.651 | 521 | 280 | 8 | 21 | 532 | 85 | 590 | 1.65e-120 | 367 |
MS.gene83067.t1 | AT5G02620 | 42.829 | 502 | 250 | 9 | 46 | 532 | 45 | 524 | 3.43e-115 | 351 |
MS.gene83067.t1 | AT5G02620 | 42.829 | 502 | 250 | 9 | 46 | 532 | 45 | 524 | 3.43e-115 | 351 |
MS.gene83067.t1 | AT5G02620 | 42.829 | 502 | 250 | 9 | 46 | 532 | 45 | 524 | 3.43e-115 | 351 |
MS.gene83067.t1 | AT5G02620 | 41.143 | 525 | 249 | 10 | 46 | 532 | 45 | 547 | 2.94e-110 | 339 |
MS.gene83067.t1 | AT5G02620 | 41.143 | 525 | 249 | 10 | 46 | 532 | 45 | 547 | 2.94e-110 | 339 |
MS.gene83067.t1 | AT1G34050 | 25.658 | 456 | 299 | 11 | 43 | 486 | 109 | 536 | 4.49e-35 | 139 |
MS.gene83067.t1 | AT5G54710 | 26.105 | 475 | 310 | 10 | 49 | 486 | 94 | 564 | 1.47e-34 | 137 |
MS.gene83067.t1 | AT5G54710 | 26.105 | 475 | 310 | 10 | 49 | 486 | 139 | 609 | 1.85e-34 | 138 |
MS.gene83067.t1 | AT2G24600 | 22.857 | 455 | 316 | 12 | 48 | 479 | 96 | 538 | 2.05e-30 | 125 |
MS.gene83067.t1 | AT2G24600 | 22.857 | 455 | 316 | 12 | 48 | 479 | 96 | 538 | 2.05e-30 | 125 |
MS.gene83067.t1 | AT1G10340 | 21.747 | 561 | 322 | 15 | 12 | 483 | 2 | 534 | 1.01e-26 | 114 |
MS.gene83067.t1 | AT1G10340 | 21.062 | 565 | 325 | 14 | 12 | 483 | 2 | 538 | 1.36e-26 | 114 |
MS.gene83067.t1 | AT5G51160 | 28.698 | 338 | 195 | 10 | 123 | 427 | 44 | 368 | 1.71e-25 | 109 |
MS.gene83067.t1 | AT1G03670 | 24.444 | 450 | 294 | 8 | 53 | 490 | 176 | 591 | 4.36e-23 | 103 |
MS.gene83067.t1 | AT4G03460 | 26.190 | 378 | 222 | 9 | 54 | 414 | 158 | 495 | 1.09e-22 | 102 |
MS.gene83067.t1 | AT4G03460 | 26.190 | 378 | 222 | 9 | 54 | 414 | 190 | 527 | 1.48e-22 | 102 |
MS.gene83067.t1 | AT5G50140 | 22.880 | 507 | 314 | 13 | 57 | 501 | 27 | 518 | 5.36e-22 | 99.8 |
MS.gene83067.t1 | AT5G54700 | 22.857 | 350 | 214 | 8 | 155 | 496 | 26 | 327 | 9.01e-22 | 97.1 |
MS.gene83067.t1 | AT4G03490 | 23.715 | 506 | 304 | 15 | 42 | 476 | 66 | 560 | 1.01e-21 | 99.4 |
MS.gene83067.t1 | AT4G03490 | 23.715 | 506 | 304 | 15 | 42 | 476 | 76 | 570 | 1.16e-21 | 99.4 |
MS.gene83067.t1 | AT4G03490 | 23.715 | 506 | 304 | 15 | 42 | 476 | 76 | 570 | 2.56e-21 | 98.6 |
MS.gene83067.t1 | AT4G03500 | 24.536 | 485 | 289 | 15 | 54 | 484 | 110 | 571 | 6.76e-21 | 97.1 |
MS.gene83067.t1 | AT4G03500 | 24.536 | 485 | 289 | 15 | 54 | 484 | 110 | 571 | 6.76e-21 | 97.1 |
MS.gene83067.t1 | AT4G03500 | 24.536 | 485 | 289 | 15 | 54 | 484 | 133 | 594 | 7.14e-21 | 97.1 |
MS.gene83067.t1 | AT4G03490 | 23.541 | 497 | 278 | 14 | 42 | 476 | 56 | 512 | 2.50e-20 | 95.1 |
MS.gene83067.t1 | AT4G03490 | 23.541 | 497 | 278 | 14 | 42 | 476 | 66 | 522 | 2.86e-20 | 95.1 |
MS.gene83067.t1 | AT4G10720 | 23.724 | 392 | 245 | 12 | 95 | 469 | 40 | 394 | 1.24e-18 | 88.6 |
MS.gene83067.t1 | AT2G24600 | 23.810 | 357 | 240 | 11 | 48 | 384 | 96 | 440 | 8.57e-18 | 87.0 |
MS.gene83067.t1 | AT2G24600 | 23.810 | 357 | 240 | 11 | 48 | 384 | 96 | 440 | 8.57e-18 | 87.0 |
MS.gene83067.t1 | AT4G10720 | 23.981 | 417 | 246 | 12 | 95 | 469 | 40 | 427 | 3.30e-17 | 84.7 |
MS.gene83067.t1 | AT5G15500 | 24.611 | 386 | 228 | 12 | 64 | 416 | 9 | 364 | 6.10e-15 | 77.8 |
MS.gene83067.t1 | AT4G03480 | 24.403 | 377 | 244 | 7 | 52 | 414 | 310 | 659 | 1.14e-14 | 77.4 |
MS.gene83067.t1 | AT5G54610 | 24.202 | 376 | 233 | 12 | 60 | 416 | 5 | 347 | 1.20e-14 | 76.6 |
MS.gene83067.t1 | AT4G03480 | 24.403 | 377 | 244 | 7 | 52 | 414 | 307 | 656 | 1.24e-14 | 77.4 |
MS.gene83067.t1 | AT5G54700 | 28.671 | 143 | 96 | 3 | 335 | 473 | 200 | 340 | 1.51e-14 | 76.6 |
MS.gene83067.t1 | AT1G14500 | 27.119 | 236 | 154 | 6 | 95 | 314 | 40 | 273 | 1.47e-12 | 70.1 |
MS.gene83067.t1 | AT3G04140 | 30.435 | 184 | 109 | 5 | 84 | 248 | 217 | 400 | 1.49e-12 | 70.9 |
MS.gene83067.t1 | AT3G04140 | 25.442 | 283 | 170 | 7 | 60 | 301 | 140 | 422 | 1.69e-11 | 67.4 |
MS.gene83067.t1 | AT4G03450 | 24.458 | 323 | 214 | 5 | 97 | 414 | 228 | 525 | 3.62e-12 | 69.3 |
MS.gene83067.t1 | AT4G03450 | 24.458 | 323 | 214 | 5 | 97 | 414 | 228 | 525 | 4.28e-12 | 69.3 |
MS.gene83067.t1 | AT1G14480 | 28.509 | 228 | 143 | 6 | 97 | 307 | 42 | 266 | 5.12e-12 | 68.6 |
MS.gene83067.t1 | AT5G54620 | 26.432 | 227 | 140 | 7 | 95 | 302 | 40 | 258 | 1.38e-11 | 67.0 |
MS.gene83067.t1 | AT2G28840 | 27.273 | 209 | 125 | 6 | 96 | 290 | 50 | 245 | 4.19e-11 | 65.5 |
Find 105 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTATATTCCTGGCATTCT+TGG | 0.206434 | 1.2:-16911684 | None:intergenic |
GGATGTGGTGAATGCTATTT+TGG | 0.213298 | 1.2:+16911095 | MS.gene83067:CDS |
AACTACTGTGACAGAATTTA+TGG | 0.213745 | 1.2:-16911858 | None:intergenic |
AAAACTCGCAAACGAGTTTC+TGG | 0.237666 | 1.2:+16911788 | MS.gene83067:CDS |
TGTTTGCATCAAAGATAAAA+AGG | 0.238955 | 1.2:+16911236 | MS.gene83067:CDS |
GGCTACTACTGTAACCGTTT+TGG | 0.267999 | 1.2:+16912195 | MS.gene83067:CDS |
CTTGTTAAGGTTATGTGATT+TGG | 0.269520 | 1.2:+16909975 | MS.gene83067:CDS |
GCAGCTAAGCGTGGCCATTT+AGG | 0.286106 | 1.2:+16910045 | MS.gene83067:CDS |
TTTGTGTTCCGGCGACATTT+TGG | 0.304444 | 1.2:+16912259 | MS.gene83067:CDS |
GTCTCTTGGCTAGTACTCTC+TGG | 0.312814 | 1.2:-16912297 | None:intergenic |
ATTCAGTTTGCCTATATTCC+TGG | 0.313342 | 1.2:-16911693 | None:intergenic |
GCACTTCATATGGCTGTAAA+AGG | 0.314512 | 1.2:+16911267 | MS.gene83067:CDS |
TGACAGAATTTATGGTGTTT+TGG | 0.321558 | 1.2:-16911850 | None:intergenic |
TTTGCTTCCACTTGGTCTCT+TGG | 0.337842 | 1.2:-16912311 | None:intergenic |
GCAAGAAACAGCCTTGGATT+TGG | 0.347383 | 1.2:+16911598 | MS.gene83067:CDS |
TGAATGCTATTGATGCAAAA+AGG | 0.362313 | 1.2:-16911886 | None:intergenic |
TTCAAATCACTTTGGTAGCT+TGG | 0.363305 | 1.2:+16912050 | MS.gene83067:CDS |
AGCTGCTGTTCAAGACCATT+TGG | 0.370230 | 1.2:+16911074 | MS.gene83067:CDS |
ACTTGTGCTACTTTGTGTTC+CGG | 0.375914 | 1.2:+16912248 | MS.gene83067:CDS |
ATTTGTTCAGCTTCTTGTTA+AGG | 0.380131 | 1.2:+16909962 | MS.gene83067:CDS |
AACAAAGATGAATCCTCAAA+TGG | 0.393821 | 1.2:+16909850 | MS.gene83067:CDS |
TTGCACAATGCGGCTAGGTA+TGG | 0.405460 | 1.2:+16911168 | MS.gene83067:CDS |
TTGTATATAGCTGCAGAAAA+TGG | 0.410625 | 1.2:+16909931 | MS.gene83067:CDS |
CCACATTGAAAATATCTTGA+TGG | 0.412940 | 1.2:-16909780 | None:intergenic |
TCAAATCACTTTGGTAGCTT+GGG | 0.417875 | 1.2:+16912051 | MS.gene83067:CDS |
ATGGCTTTGTTCAGTTTGCC+AGG | 0.419971 | 1.2:+16911908 | MS.gene83067:CDS |
AGAAAGCAACAGCCGGAGGC+AGG | 0.430156 | 1.2:+16911938 | MS.gene83067:CDS |
AGCTGCAGAAAATGGTGTTA+AGG | 0.437622 | 1.2:+16909939 | MS.gene83067:CDS |
GCTAGAGTCCCAACTAGAAT+TGG | 0.440451 | 1.2:-16912223 | None:intergenic |
CTTGGCACCGCATTCTGAAA+GGG | 0.444046 | 1.2:-16911666 | None:intergenic |
GCAACAGCCGGAGGCAGGGA+AGG | 0.450570 | 1.2:+16911943 | MS.gene83067:CDS |
TGGGAACGCCAATTCTAGTT+GGG | 0.451330 | 1.2:+16912215 | MS.gene83067:CDS |
ATTTGGAGATACTCAAAATC+AGG | 0.451363 | 1.2:+16909992 | MS.gene83067:CDS |
GGGTCAAACAGCACTTCATA+TGG | 0.457229 | 1.2:+16911257 | MS.gene83067:CDS |
GCCAAGAATGCCAGGAATAT+AGG | 0.464086 | 1.2:+16911683 | MS.gene83067:CDS |
TCAGTTCAATGATGATAGTA+AGG | 0.464242 | 1.2:+16911127 | MS.gene83067:CDS |
CAATAAGTGCTTTCACGATA+CGG | 0.475604 | 1.2:-16911197 | None:intergenic |
TCTCTTGGCTAGTACTCTCT+GGG | 0.477333 | 1.2:-16912296 | None:intergenic |
ATAAAGTGGACTAGTGTTTG+AGG | 0.478223 | 1.2:-16911049 | None:intergenic |
TTGGGAACGCCAATTCTAGT+TGG | 0.481527 | 1.2:+16912214 | MS.gene83067:CDS |
GTTCGATCTGGTGATCTTGA+AGG | 0.481638 | 1.2:+16909802 | MS.gene83067:CDS |
TGGTTGTTGGAAAGGAAAGA+TGG | 0.491658 | 1.2:+16912170 | MS.gene83067:CDS |
TGCACAATGCGGCTAGGTAT+GGG | 0.497914 | 1.2:+16911169 | MS.gene83067:CDS |
AGATTCATCTCTGGAAATCA+AGG | 0.501491 | 1.2:+16911640 | MS.gene83067:CDS |
TGAACAGCAGCTAAATAAAG+TGG | 0.504357 | 1.2:-16911063 | None:intergenic |
AATTCAGAAATTGATGATGA+TGG | 0.505913 | 1.2:-16909874 | None:intergenic |
CTTTGGTAGCTTGGGACACA+AGG | 0.509015 | 1.2:+16912059 | MS.gene83067:CDS |
GAAAGCAACAGCCGGAGGCA+GGG | 0.509958 | 1.2:+16911939 | MS.gene83067:CDS |
AATGCGGTGCCAAGAATGCC+AGG | 0.511096 | 1.2:+16911675 | MS.gene83067:CDS |
GAGAATGATTTGCTTCCACT+TGG | 0.512219 | 1.2:-16912319 | None:intergenic |
ACGGCTTGTGCGTGCACTTG+TGG | 0.513592 | 1.2:+16912124 | MS.gene83067:CDS |
TAGAATTGGCGTTCCCAAAA+CGG | 0.514480 | 1.2:-16912209 | None:intergenic |
CAGCTCTTCACATGGCTACT+CGG | 0.515478 | 1.2:+16911367 | MS.gene83067:CDS |
TTGTCCATGCAGAATGATGC+TGG | 0.517194 | 1.2:+16909898 | MS.gene83067:CDS |
TGATGATGATGGCCCATTTG+AGG | 0.517523 | 1.2:-16909863 | None:intergenic |
TCTTGGCACCGCATTCTGAA+AGG | 0.518785 | 1.2:-16911667 | None:intergenic |
ACAAAGATGAATCCTCAAAT+GGG | 0.518946 | 1.2:+16909851 | MS.gene83067:CDS |
GGAATTGAGGAAAATTCATC+GGG | 0.521997 | 1.2:+16911820 | MS.gene83067:CDS |
CTGGTATAGCTAAGGAATTG+AGG | 0.530895 | 1.2:+16911807 | MS.gene83067:CDS |
TAGCATTCACCACATCCAAA+TGG | 0.533118 | 1.2:-16911089 | None:intergenic |
TACTCGGAAAGCTCGTTCGC+AGG | 0.533833 | 1.2:+16911383 | MS.gene83067:CDS |
TCGCATAACTTACAAGCCTC+AGG | 0.537583 | 1.2:-16911024 | None:intergenic |
AGGAATTGAGGAAAATTCAT+CGG | 0.537584 | 1.2:+16911819 | MS.gene83067:CDS |
TCCGTACGGAGATTCATCTC+TGG | 0.537976 | 1.2:+16911631 | MS.gene83067:CDS |
TAATCAGCAAGAAACAGCCT+TGG | 0.538754 | 1.2:+16911592 | MS.gene83067:CDS |
ATCATTCTCATGGTCTTACT+CGG | 0.539729 | 1.2:+16912333 | MS.gene83067:CDS |
CACATTGAAAATATCTTGAT+GGG | 0.541594 | 1.2:-16909779 | None:intergenic |
TTCTCCAGCATCATTCTGCA+TGG | 0.550912 | 1.2:-16909902 | None:intergenic |
TGTTGCTTTCTATATTGACC+TGG | 0.564706 | 1.2:-16911926 | None:intergenic |
ACGAGTTTCTGGTATAGCTA+AGG | 0.567343 | 1.2:+16911799 | MS.gene83067:CDS |
CTGCGTTGCACAATGCGGCT+AGG | 0.570252 | 1.2:+16911163 | MS.gene83067:CDS |
TGTTGTTGTTCAAATCACTT+TGG | 0.570912 | 1.2:+16912042 | MS.gene83067:CDS |
CAAAAGACAGAAAGCACTGA+AGG | 0.573255 | 1.2:-16911987 | None:intergenic |
ATATTCGCCTTCCCTGCCTC+CGG | 0.575896 | 1.2:-16911950 | None:intergenic |
GTGGAAGCAAATCATTCTCA+TGG | 0.577834 | 1.2:+16912323 | MS.gene83067:CDS |
AAGTTTATCTGCCAAATCCA+AGG | 0.578992 | 1.2:-16911609 | None:intergenic |
TCGTGAAAGCACTTATTGCA+AGG | 0.581715 | 1.2:+16911202 | MS.gene83067:CDS |
TTCGGAATCCAAAATGTCGC+CGG | 0.585823 | 1.2:-16912267 | None:intergenic |
TCAATATAGAAAGCAACAGC+CGG | 0.602944 | 1.2:+16911931 | MS.gene83067:CDS |
AGGACAGTGTACTTCAGTAG+TGG | 0.604681 | 1.2:+16911287 | MS.gene83067:CDS |
GTACTAGCCAAGAGACCAAG+TGG | 0.606753 | 1.2:+16912304 | MS.gene83067:CDS |
CGGTGATTAACAAGCTAATG+TGG | 0.606844 | 1.2:+16912101 | MS.gene83067:CDS |
AGGCAAACTGAATGAAGCCA+TGG | 0.607579 | 1.2:+16911703 | MS.gene83067:CDS |
TGTTCAAGACCATTTGGATG+TGG | 0.612236 | 1.2:+16911080 | MS.gene83067:CDS |
GTACTCTCTGGGATTCACTT+CGG | 0.612803 | 1.2:-16912285 | None:intergenic |
TTTCATGTTGCAGCTAAGCG+TGG | 0.612983 | 1.2:+16910036 | MS.gene83067:CDS |
ACAGTGTACTTCAGTAGTGG+AGG | 0.615069 | 1.2:+16911290 | MS.gene83067:CDS |
TTGGCAGATAAACTTCCGTA+CGG | 0.616155 | 1.2:+16911617 | MS.gene83067:CDS |
TCCAGAGATGAATCTCCGTA+CGG | 0.620002 | 1.2:-16911632 | None:intergenic |
CTCGGCACATATATCAGATG+AGG | 0.620591 | 1.2:+16912351 | MS.gene83067:CDS |
CGTGAAAGCACTTATTGCAA+GGG | 0.622452 | 1.2:+16911203 | MS.gene83067:CDS |
GGGCAATACAGCTCTTCACA+TGG | 0.627279 | 1.2:+16911359 | MS.gene83067:CDS |
GGCACATATATCAGATGAGG+AGG | 0.636443 | 1.2:+16912354 | MS.gene83067:CDS |
GATTAACAAGCTAATGTGGA+CGG | 0.640672 | 1.2:+16912105 | MS.gene83067:CDS |
TTTGGTAGCTTGGGACACAA+GGG | 0.645817 | 1.2:+16912060 | MS.gene83067:CDS |
TGATCTTGAAGGACTCAAAG+AGG | 0.646202 | 1.2:+16909813 | MS.gene83067:CDS |
AGCCATGGAACTTAAAAGAG+TGG | 0.647486 | 1.2:+16911718 | MS.gene83067:CDS |
AAGGAAGCCCTTTCAGAATG+CGG | 0.648397 | 1.2:+16911659 | MS.gene83067:CDS |
GGCTCAAAGACAGATTGTGT+CGG | 0.649739 | 1.2:+16912081 | MS.gene83067:CDS |
TGTTGGAAAGGAAAGATGGA+TGG | 0.673837 | 1.2:+16912174 | MS.gene83067:CDS |
ATATAGAAAGCAACAGCCGG+AGG | 0.691860 | 1.2:+16911934 | MS.gene83067:CDS |
CAAAACTGCGTTGCACAATG+CGG | 0.701505 | 1.2:+16911158 | MS.gene83067:CDS |
TAAGTGCTTTCACGATACGG+AGG | 0.720583 | 1.2:-16911194 | None:intergenic |
GAGAGAAATGAAAAGAGACG+TGG | 0.721398 | 1.2:-16912014 | None:intergenic |
GGTGAGTGATATAAAGCACG+AGG | 0.733499 | 1.2:+16911739 | MS.gene83067:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAACTGAAATAAAAGA+TGG | - | chr1.2:16911418-16911437 | None:intergenic | 15.0% |
!!! | ACACATCTTTTAAAAAAATT+AGG | + | chr1.2:16910547-16910566 | MS.gene83067:intron | 15.0% |
!!! | ATCACATGATTTTAAAAAAT+CGG | - | chr1.2:16910415-16910434 | None:intergenic | 15.0% |
!! | AGTAACAAAAAAATATGTCT+AGG | - | chr1.2:16910152-16910171 | None:intergenic | 20.0% |
!! | ATTAAACGAAAAAGATAAGA+AGG | + | chr1.2:16911338-16911357 | MS.gene83067:CDS | 20.0% |
!! | GAAAAAACAATATACCTAAA+TGG | - | chr1.2:16910062-16910081 | None:intergenic | 20.0% |
!! | TTAAACGAAAAAGATAAGAA+GGG | + | chr1.2:16911339-16911358 | MS.gene83067:CDS | 20.0% |
!!! | AATTGGGTATATTTTATTGA+TGG | + | chr1.2:16910120-16910139 | MS.gene83067:intron | 20.0% |
! | AAAATCAGAAACTATTCTGA+TGG | - | chr1.2:16910188-16910207 | None:intergenic | 25.0% |
! | AAAGTAAAATATCAAGGCTA+AGG | + | chr1.2:16910674-16910693 | MS.gene83067:intron | 25.0% |
! | AAGTAAAATATCAAGGCTAA+GGG | + | chr1.2:16910675-16910694 | MS.gene83067:intron | 25.0% |
! | ATGATGATAGTAAGGAAAAA+TGG | + | chr1.2:16911135-16911154 | MS.gene83067:CDS | 25.0% |
! | ATGCAATTAAGTACAAATTG+TGG | - | chr1.2:16910805-16910824 | None:intergenic | 25.0% |
! | CACATTGAAAATATCTTGAT+GGG | - | chr1.2:16909782-16909801 | None:intergenic | 25.0% |
! | CCTACAAAAGTAAAATATCA+AGG | + | chr1.2:16910668-16910687 | MS.gene83067:intron | 25.0% |
! | CTTAATATCAGCAATATTGA+AGG | - | chr1.2:16910932-16910951 | None:intergenic | 25.0% |
! | CTTCAATATTGCTGATATTA+AGG | + | chr1.2:16910930-16910949 | MS.gene83067:intron | 25.0% |
! | GTTTGCATCAAAGATAAAAA+GGG | + | chr1.2:16911237-16911256 | MS.gene83067:CDS | 25.0% |
! | TCGCAATATACATAATCATT+AGG | - | chr1.2:16910368-16910387 | None:intergenic | 25.0% |
! | TGTTTGCATCAAAGATAAAA+AGG | + | chr1.2:16911236-16911255 | MS.gene83067:CDS | 25.0% |
!!! | AATTCAGAAATTGATGATGA+TGG | - | chr1.2:16909877-16909896 | None:intergenic | 25.0% |
!!! | CCTTGATATTTTACTTTTGT+AGG | - | chr1.2:16910671-16910690 | None:intergenic | 25.0% |
!!! | CTTTTTCGTTTAATACCATT+GGG | - | chr1.2:16911332-16911351 | None:intergenic | 25.0% |
!!! | GAACAAATTACTCTAAAACA+TGG | - | chr1.2:16910238-16910257 | None:intergenic | 25.0% |
!!! | TATTTCAGTTTTTTACCACT+TGG | + | chr1.2:16911423-16911442 | MS.gene83067:intron | 25.0% |
!!! | TCTTTTTCGTTTAATACCAT+TGG | - | chr1.2:16911333-16911352 | None:intergenic | 25.0% |
!!! | TTCATTCTTTTTCAGCAATT+GGG | + | chr1.2:16910104-16910123 | MS.gene83067:intron | 25.0% |
!!! | TTTCATTCTTTTTCAGCAAT+TGG | + | chr1.2:16910103-16910122 | MS.gene83067:intron | 25.0% |
!!! | TTTTTTTCCAGAAATTGTGA+GGG | + | chr1.2:16910984-16911003 | MS.gene83067:intron | 25.0% |
AACAAAGATGAATCCTCAAA+TGG | + | chr1.2:16909850-16909869 | MS.gene83067:CDS | 30.0% | |
AACTACTGTGACAGAATTTA+TGG | - | chr1.2:16911861-16911880 | None:intergenic | 30.0% | |
ACAAAGATGAATCCTCAAAT+GGG | + | chr1.2:16909851-16909870 | MS.gene83067:CDS | 30.0% | |
AGGAATTGAGGAAAATTCAT+CGG | + | chr1.2:16911819-16911838 | MS.gene83067:CDS | 30.0% | |
ATTTGGAGATACTCAAAATC+AGG | + | chr1.2:16909992-16910011 | MS.gene83067:CDS | 30.0% | |
ATTTGTTCAGCTTCTTGTTA+AGG | + | chr1.2:16909962-16909981 | MS.gene83067:CDS | 30.0% | |
CCACATTGAAAATATCTTGA+TGG | - | chr1.2:16909783-16909802 | None:intergenic | 30.0% | |
CTTGTTAAGGTTATGTGATT+TGG | + | chr1.2:16909975-16909994 | MS.gene83067:CDS | 30.0% | |
CTTTATATTGCGGAAAAATG+TGG | + | chr1.2:16910301-16910320 | MS.gene83067:intron | 30.0% | |
GAACATGACATAATTATGCA+TGG | - | chr1.2:16911484-16911503 | None:intergenic | 30.0% | |
GATATTGCAGTTATAAGCTT+AGG | - | chr1.2:16910599-16910618 | None:intergenic | 30.0% | |
GTATCTGCTACATATTCATA+AGG | + | chr1.2:16910630-16910649 | MS.gene83067:intron | 30.0% | |
TCAGTTCAATGATGATAGTA+AGG | + | chr1.2:16911127-16911146 | MS.gene83067:CDS | 30.0% | |
TGAATGCTATTGATGCAAAA+AGG | - | chr1.2:16911889-16911908 | None:intergenic | 30.0% | |
TTGTATATAGCTGCAGAAAA+TGG | + | chr1.2:16909931-16909950 | MS.gene83067:CDS | 30.0% | |
! | AATCCTAGTTTGCGAAAAAT+CGG | + | chr1.2:16910715-16910734 | MS.gene83067:intron | 30.0% |
! | CACATTTTTCCGCAATATAA+AGG | - | chr1.2:16910303-16910322 | None:intergenic | 30.0% |
! | CCATCAAGATATTTTCAATG+TGG | + | chr1.2:16909780-16909799 | MS.gene83067:CDS | 30.0% |
! | TGACAGAATTTATGGTGTTT+TGG | - | chr1.2:16911853-16911872 | None:intergenic | 30.0% |
! | TGTTGTTGTTCAAATCACTT+TGG | + | chr1.2:16912042-16912061 | MS.gene83067:CDS | 30.0% |
! | TTTTGCATCAATAGCATTCA+TGG | + | chr1.2:16911889-16911908 | MS.gene83067:CDS | 30.0% |
!!! | CTTTTTTTCCAGAAATTGTG+AGG | + | chr1.2:16910983-16911002 | MS.gene83067:intron | 30.0% |
AAAATCTCCCTCACAATTTC+TGG | - | chr1.2:16910994-16911013 | None:intergenic | 35.0% | |
AAGTTTATCTGCCAAATCCA+AGG | - | chr1.2:16911612-16911631 | None:intergenic | 35.0% | |
ATACCTATTTCATTCATGGC+AGG | - | chr1.2:16910518-16910537 | None:intergenic | 35.0% | |
ATTCAGTTTGCCTATATTCC+TGG | - | chr1.2:16911696-16911715 | None:intergenic | 35.0% | |
CAATAAGTGCTTTCACGATA+CGG | - | chr1.2:16911200-16911219 | None:intergenic | 35.0% | |
CACCATACCTATTTCATTCA+TGG | - | chr1.2:16910522-16910541 | None:intergenic | 35.0% | |
CCAGTGTTGTCAAATAATAG+CGG | - | chr1.2:16910874-16910893 | None:intergenic | 35.0% | |
GATTAACAAGCTAATGTGGA+CGG | + | chr1.2:16912105-16912124 | MS.gene83067:CDS | 35.0% | |
GGAATTGAGGAAAATTCATC+GGG | + | chr1.2:16911820-16911839 | MS.gene83067:CDS | 35.0% | |
TCAATATAGAAAGCAACAGC+CGG | + | chr1.2:16911931-16911950 | MS.gene83067:CDS | 35.0% | |
TGAACAGCAGCTAAATAAAG+TGG | - | chr1.2:16911066-16911085 | None:intergenic | 35.0% | |
TGCCATGAATGAAATAGGTA+TGG | + | chr1.2:16910517-16910536 | MS.gene83067:intron | 35.0% | |
! | AGATTCATCTCTGGAAATCA+AGG | + | chr1.2:16911640-16911659 | MS.gene83067:CDS | 35.0% |
! | ATCATTCTCATGGTCTTACT+CGG | + | chr1.2:16912333-16912352 | MS.gene83067:CDS | 35.0% |
! | ATTTTCAATGTGGTTCGATC+TGG | + | chr1.2:16909790-16909809 | MS.gene83067:CDS | 35.0% |
! | TCAAATCACTTTGGTAGCTT+GGG | + | chr1.2:16912051-16912070 | MS.gene83067:CDS | 35.0% |
! | TTCAAATCACTTTGGTAGCT+TGG | + | chr1.2:16912050-16912069 | MS.gene83067:CDS | 35.0% |
! | TTTTCTCGCAATAGCTTTTG+TGG | + | chr1.2:16912150-16912169 | MS.gene83067:CDS | 35.0% |
!! | ATAAAGTGGACTAGTGTTTG+AGG | - | chr1.2:16911052-16911071 | None:intergenic | 35.0% |
!! | TGTTGCTTTCTATATTGACC+TGG | - | chr1.2:16911929-16911948 | None:intergenic | 35.0% |
AAAACTCGCAAACGAGTTTC+TGG | + | chr1.2:16911788-16911807 | MS.gene83067:CDS | 40.0% | |
ACGATATCGCGACATCAATT+TGG | - | chr1.2:16910337-16910356 | None:intergenic | 40.0% | |
AGCCATGGAACTTAAAAGAG+TGG | + | chr1.2:16911718-16911737 | MS.gene83067:CDS | 40.0% | |
CCGCTATTATTTGACAACAC+TGG | + | chr1.2:16910871-16910890 | MS.gene83067:intron | 40.0% | |
CGGTGATTAACAAGCTAATG+TGG | + | chr1.2:16912101-16912120 | MS.gene83067:CDS | 40.0% | |
CTGGTATAGCTAAGGAATTG+AGG | + | chr1.2:16911807-16911826 | MS.gene83067:CDS | 40.0% | |
GAACCTGCCATGAATGAAAT+AGG | + | chr1.2:16910512-16910531 | MS.gene83067:intron | 40.0% | |
GAGAGAAATGAAAAGAGACG+TGG | - | chr1.2:16912017-16912036 | None:intergenic | 40.0% | |
GCACTTCATATGGCTGTAAA+AGG | + | chr1.2:16911267-16911286 | MS.gene83067:CDS | 40.0% | |
GTGGAAGCAAATCATTCTCA+TGG | + | chr1.2:16912323-16912342 | MS.gene83067:CDS | 40.0% | |
TAATCAGCAAGAAACAGCCT+TGG | + | chr1.2:16911592-16911611 | MS.gene83067:CDS | 40.0% | |
TAGAATTGGCGTTCCCAAAA+CGG | - | chr1.2:16912212-16912231 | None:intergenic | 40.0% | |
TAGCATTCACCACATCCAAA+TGG | - | chr1.2:16911092-16911111 | None:intergenic | 40.0% | |
TGATCTTGAAGGACTCAAAG+AGG | + | chr1.2:16909813-16909832 | MS.gene83067:CDS | 40.0% | |
TGGTTGTTGGAAAGGAAAGA+TGG | + | chr1.2:16912170-16912189 | MS.gene83067:CDS | 40.0% | |
TGTTCAAGACCATTTGGATG+TGG | + | chr1.2:16911080-16911099 | MS.gene83067:CDS | 40.0% | |
TGTTGGAAAGGAAAGATGGA+TGG | + | chr1.2:16912174-16912193 | MS.gene83067:CDS | 40.0% | |
TTCATAAGGTCTCACATGAC+AGG | + | chr1.2:16910644-16910663 | MS.gene83067:intron | 40.0% | |
TTGGCAGATAAACTTCCGTA+CGG | + | chr1.2:16911617-16911636 | MS.gene83067:CDS | 40.0% | |
! | ACTCCGATTTTTCGCAAACT+AGG | - | chr1.2:16910721-16910740 | None:intergenic | 40.0% |
! | AGCTGCAGAAAATGGTGTTA+AGG | + | chr1.2:16909939-16909958 | MS.gene83067:CDS | 40.0% |
! | AGCTTTTGTGGTTGTTGGAA+AGG | + | chr1.2:16912162-16912181 | MS.gene83067:CDS | 40.0% |
! | GATTTTACAAGCTGACCCAA+TGG | + | chr1.2:16911314-16911333 | MS.gene83067:CDS | 40.0% |
! | GCAATAGCTTTTGTGGTTGT+TGG | + | chr1.2:16912157-16912176 | MS.gene83067:CDS | 40.0% |
! | GCTACTACTGTAACCGTTTT+GGG | + | chr1.2:16912196-16912215 | MS.gene83067:CDS | 40.0% |
!! | ACGAGTTTCTGGTATAGCTA+AGG | + | chr1.2:16911799-16911818 | MS.gene83067:CDS | 40.0% |
!! | ACTTGTGCTACTTTGTGTTC+CGG | + | chr1.2:16912248-16912267 | MS.gene83067:CDS | 40.0% |
!! | CAAAAGACAGAAAGCACTGA+AGG | - | chr1.2:16911990-16912009 | None:intergenic | 40.0% |
!! | CGTGAAAGCACTTATTGCAA+GGG | + | chr1.2:16911203-16911222 | MS.gene83067:CDS | 40.0% |
!! | GAGAATGATTTGCTTCCACT+TGG | - | chr1.2:16912322-16912341 | None:intergenic | 40.0% |
!! | GGATGTGGTGAATGCTATTT+TGG | + | chr1.2:16911095-16911114 | MS.gene83067:CDS | 40.0% |
!! | TCGTGAAAGCACTTATTGCA+AGG | + | chr1.2:16911202-16911221 | MS.gene83067:CDS | 40.0% |
!! | TGAGGGAGATTTTGAGTACT+TGG | + | chr1.2:16911001-16911020 | MS.gene83067:CDS | 40.0% |
!!! | CACCACTCTTTTAAGTTCCA+TGG | - | chr1.2:16911723-16911742 | None:intergenic | 40.0% |
AAGGAAGCCCTTTCAGAATG+CGG | + | chr1.2:16911659-16911678 | MS.gene83067:CDS | 45.0% | |
ACAGTGTACTTCAGTAGTGG+AGG | + | chr1.2:16911290-16911309 | MS.gene83067:CDS | 45.0% | |
ACTGAAGCAAAGCAACCAAG+TGG | - | chr1.2:16911441-16911460 | None:intergenic | 45.0% | |
AGCTGCTGTTCAAGACCATT+TGG | + | chr1.2:16911074-16911093 | MS.gene83067:CDS | 45.0% | |
AGGACAGTGTACTTCAGTAG+TGG | + | chr1.2:16911287-16911306 | MS.gene83067:CDS | 45.0% | |
AGGCAAACTGAATGAAGCCA+TGG | + | chr1.2:16911703-16911722 | MS.gene83067:CDS | 45.0% | |
ATAGCGGTACTATAGCGCAA+TGG | - | chr1.2:16910858-16910877 | None:intergenic | 45.0% | |
ATATAGAAAGCAACAGCCGG+AGG | + | chr1.2:16911934-16911953 | MS.gene83067:CDS | 45.0% | |
CAAAACTGCGTTGCACAATG+CGG | + | chr1.2:16911158-16911177 | MS.gene83067:CDS | 45.0% | |
CTCGGCACATATATCAGATG+AGG | + | chr1.2:16912351-16912370 | MS.gene83067:CDS | 45.0% | |
GCAAGAAACAGCCTTGGATT+TGG | + | chr1.2:16911598-16911617 | MS.gene83067:CDS | 45.0% | |
GCCAAGAATGCCAGGAATAT+AGG | + | chr1.2:16911683-16911702 | MS.gene83067:CDS | 45.0% | |
GCCTATATTCCTGGCATTCT+TGG | - | chr1.2:16911687-16911706 | None:intergenic | 45.0% | |
GCGGAAAAATGTGGCTGATT+AGG | + | chr1.2:16910310-16910329 | MS.gene83067:intron | 45.0% | |
GCTAGAGTCCCAACTAGAAT+TGG | - | chr1.2:16912226-16912245 | None:intergenic | 45.0% | |
GGCACATATATCAGATGAGG+AGG | + | chr1.2:16912354-16912373 | MS.gene83067:CDS | 45.0% | |
GGCTCAAAGACAGATTGTGT+CGG | + | chr1.2:16912081-16912100 | MS.gene83067:CDS | 45.0% | |
GGGTCAAACAGCACTTCATA+TGG | + | chr1.2:16911257-16911276 | MS.gene83067:CDS | 45.0% | |
GGTGAGTGATATAAAGCACG+AGG | + | chr1.2:16911739-16911758 | MS.gene83067:CDS | 45.0% | |
GTTCGATCTGGTGATCTTGA+AGG | + | chr1.2:16909802-16909821 | MS.gene83067:CDS | 45.0% | |
TAAGTGCTTTCACGATACGG+AGG | - | chr1.2:16911197-16911216 | None:intergenic | 45.0% | |
TATTGCGATCCTCCCAATTG+CGG | + | chr1.2:16910380-16910399 | MS.gene83067:intron | 45.0% | |
TCCAGAGATGAATCTCCGTA+CGG | - | chr1.2:16911635-16911654 | None:intergenic | 45.0% | |
TCGCATAACTTACAAGCCTC+AGG | - | chr1.2:16911027-16911046 | None:intergenic | 45.0% | |
TCTAGTTGCGATCGTGATTG+TGG | + | chr1.2:16910265-16910284 | MS.gene83067:intron | 45.0% | |
TCTCTTGGCTAGTACTCTCT+GGG | - | chr1.2:16912299-16912318 | None:intergenic | 45.0% | |
TGCTGCGAGCCTTTATATTG+CGG | + | chr1.2:16910291-16910310 | MS.gene83067:intron | 45.0% | |
TTCGGAATCCAAAATGTCGC+CGG | - | chr1.2:16912270-16912289 | None:intergenic | 45.0% | |
TTCTCCAGCATCATTCTGCA+TGG | - | chr1.2:16909905-16909924 | None:intergenic | 45.0% | |
TTGGGAACGCCAATTCTAGT+TGG | + | chr1.2:16912214-16912233 | MS.gene83067:CDS | 45.0% | |
TTGTCCATGCAGAATGATGC+TGG | + | chr1.2:16909898-16909917 | MS.gene83067:CDS | 45.0% | |
TTTCATGTTGCAGCTAAGCG+TGG | + | chr1.2:16910036-16910055 | MS.gene83067:CDS | 45.0% | |
TTTGCTTCCACTTGGTCTCT+TGG | - | chr1.2:16912314-16912333 | None:intergenic | 45.0% | |
! | ATTCTGATGGTGTAGCTCAG+TGG | - | chr1.2:16910175-16910194 | None:intergenic | 45.0% |
! | GGCTACTACTGTAACCGTTT+TGG | + | chr1.2:16912195-16912214 | MS.gene83067:CDS | 45.0% |
! | TGGGAACGCCAATTCTAGTT+GGG | + | chr1.2:16912215-16912234 | MS.gene83067:CDS | 45.0% |
! | TTTGGTAGCTTGGGACACAA+GGG | + | chr1.2:16912060-16912079 | MS.gene83067:CDS | 45.0% |
! | TTTGTGTTCCGGCGACATTT+TGG | + | chr1.2:16912259-16912278 | MS.gene83067:CDS | 45.0% |
!! | ATGGCTTTGTTCAGTTTGCC+AGG | + | chr1.2:16911908-16911927 | MS.gene83067:CDS | 45.0% |
!! | GATTTTGAGTACTTGGCCTG+AGG | + | chr1.2:16911008-16911027 | MS.gene83067:CDS | 45.0% |
!! | GTACTCTCTGGGATTCACTT+CGG | - | chr1.2:16912288-16912307 | None:intergenic | 45.0% |
!! | TGATGATGATGGCCCATTTG+AGG | - | chr1.2:16909866-16909885 | None:intergenic | 45.0% |
CAGCTCTTCACATGGCTACT+CGG | + | chr1.2:16911367-16911386 | MS.gene83067:CDS | 50.0% | |
GATCCTCCCAATTGCGGTTA+GGG | + | chr1.2:16910386-16910405 | MS.gene83067:intron | 50.0% | |
GGGCAATACAGCTCTTCACA+TGG | + | chr1.2:16911359-16911378 | MS.gene83067:CDS | 50.0% | |
GTACTAGCCAAGAGACCAAG+TGG | + | chr1.2:16912304-16912323 | MS.gene83067:CDS | 50.0% | |
GTCTCTTGGCTAGTACTCTC+TGG | - | chr1.2:16912300-16912319 | None:intergenic | 50.0% | |
TCCGTACGGAGATTCATCTC+TGG | + | chr1.2:16911631-16911650 | MS.gene83067:CDS | 50.0% | |
TCTTGGCACCGCATTCTGAA+AGG | - | chr1.2:16911670-16911689 | None:intergenic | 50.0% | |
TGCACAATGCGGCTAGGTAT+GGG | + | chr1.2:16911169-16911188 | MS.gene83067:CDS | 50.0% | |
TTGCACAATGCGGCTAGGTA+TGG | + | chr1.2:16911168-16911187 | MS.gene83067:CDS | 50.0% | |
! | CTTGGCACCGCATTCTGAAA+GGG | - | chr1.2:16911669-16911688 | None:intergenic | 50.0% |
! | CTTTGGTAGCTTGGGACACA+AGG | + | chr1.2:16912059-16912078 | MS.gene83067:CDS | 50.0% |
AGTCCCTAACCGCAATTGGG+AGG | - | chr1.2:16910392-16910411 | None:intergenic | 55.0% | |
ATATTCGCCTTCCCTGCCTC+CGG | - | chr1.2:16911953-16911972 | None:intergenic | 55.0% | |
CGATCCTCCCAATTGCGGTT+AGG | + | chr1.2:16910385-16910404 | MS.gene83067:intron | 55.0% | |
CGGAGTCCCTAACCGCAATT+GGG | - | chr1.2:16910395-16910414 | None:intergenic | 55.0% | |
GCAGCTAAGCGTGGCCATTT+AGG | + | chr1.2:16910045-16910064 | MS.gene83067:CDS | 55.0% | |
TACTCGGAAAGCTCGTTCGC+AGG | + | chr1.2:16911383-16911402 | MS.gene83067:CDS | 55.0% | |
TCGGAGTCCCTAACCGCAAT+TGG | - | chr1.2:16910396-16910415 | None:intergenic | 55.0% | |
! | AATGCGGTGCCAAGAATGCC+AGG | + | chr1.2:16911675-16911694 | MS.gene83067:CDS | 55.0% |
ACGGCTTGTGCGTGCACTTG+TGG | + | chr1.2:16912124-16912143 | MS.gene83067:CDS | 60.0% | |
AGAAAGCAACAGCCGGAGGC+AGG | + | chr1.2:16911938-16911957 | MS.gene83067:CDS | 60.0% | |
CTGCGTTGCACAATGCGGCT+AGG | + | chr1.2:16911163-16911182 | MS.gene83067:CDS | 60.0% | |
GAAAGCAACAGCCGGAGGCA+GGG | + | chr1.2:16911939-16911958 | MS.gene83067:CDS | 60.0% | |
GCAACAGCCGGAGGCAGGGA+AGG | + | chr1.2:16911943-16911962 | MS.gene83067:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 16909751 | 16912414 | 16909751 | ID=MS.gene83067 |
chr1.2 | mRNA | 16909751 | 16912414 | 16909751 | ID=MS.gene83067.t1;Parent=MS.gene83067 |
chr1.2 | exon | 16909751 | 16910066 | 16909751 | ID=MS.gene83067.t1.exon1;Parent=MS.gene83067.t1 |
chr1.2 | CDS | 16909751 | 16910066 | 16909751 | ID=cds.MS.gene83067.t1;Parent=MS.gene83067.t1 |
chr1.2 | exon | 16910995 | 16911404 | 16910995 | ID=MS.gene83067.t1.exon2;Parent=MS.gene83067.t1 |
chr1.2 | CDS | 16910995 | 16911404 | 16910995 | ID=cds.MS.gene83067.t1;Parent=MS.gene83067.t1 |
chr1.2 | exon | 16911542 | 16912414 | 16911542 | ID=MS.gene83067.t1.exon3;Parent=MS.gene83067.t1 |
chr1.2 | CDS | 16911542 | 16912414 | 16911542 | ID=cds.MS.gene83067.t1;Parent=MS.gene83067.t1 |
Gene Sequence |
Protein sequence |