Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015655.t1 | XP_003630941.1 | 97.6 | 540 | 11 | 1 | 1 | 540 | 1 | 538 | 5.30E-185 | 657.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015655.t1 | Q9ZU96 | 76.9 | 541 | 115 | 5 | 1 | 540 | 1 | 532 | 1.5e-119 | 431.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015655.t1 | G7LAK9 | 97.6 | 540 | 11 | 1 | 1 | 540 | 1 | 538 | 3.8e-185 | 657.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015655.t1 | MTR_8g105260 | 99.074 | 540 | 3 | 1 | 1 | 540 | 1 | 538 | 0.0 | 1099 |
MS.gene015655.t1 | MTR_1g032100 | 77.079 | 541 | 113 | 4 | 1 | 540 | 1 | 531 | 0.0 | 862 |
MS.gene015655.t1 | MTR_4g062100 | 46.341 | 451 | 228 | 5 | 56 | 496 | 61 | 507 | 1.39e-130 | 392 |
MS.gene015655.t1 | MTR_2g096190 | 41.055 | 531 | 280 | 7 | 20 | 540 | 37 | 544 | 7.42e-129 | 387 |
MS.gene015655.t1 | MTR_7g117620 | 44.286 | 490 | 253 | 8 | 56 | 540 | 72 | 546 | 2.90e-127 | 383 |
MS.gene015655.t1 | MTR_1g115575 | 41.714 | 525 | 286 | 6 | 21 | 540 | 84 | 593 | 1.42e-125 | 380 |
MS.gene015655.t1 | MTR_7g100390 | 43.636 | 495 | 259 | 5 | 54 | 540 | 38 | 520 | 2.54e-125 | 377 |
MS.gene015655.t1 | MTR_7g100430 | 38.286 | 525 | 298 | 7 | 21 | 540 | 79 | 582 | 3.19e-103 | 322 |
MS.gene015655.t1 | MTR_2g101310 | 24.943 | 441 | 256 | 9 | 100 | 470 | 138 | 573 | 6.54e-35 | 139 |
MS.gene015655.t1 | MTR_3g105650 | 25.290 | 431 | 261 | 12 | 102 | 514 | 39 | 426 | 2.15e-25 | 108 |
MS.gene015655.t1 | MTR_2g101320 | 23.570 | 437 | 261 | 7 | 100 | 468 | 138 | 569 | 1.66e-24 | 108 |
MS.gene015655.t1 | MTR_2g101310 | 33.516 | 182 | 119 | 2 | 100 | 279 | 138 | 319 | 2.37e-23 | 103 |
MS.gene015655.t1 | MTR_1g069110 | 24.437 | 311 | 214 | 5 | 134 | 423 | 50 | 360 | 1.87e-19 | 91.7 |
MS.gene015655.t1 | MTR_5g085810 | 23.789 | 454 | 293 | 10 | 49 | 469 | 252 | 685 | 1.21e-15 | 80.5 |
MS.gene015655.t1 | MTR_8g467780 | 24.585 | 301 | 182 | 6 | 103 | 382 | 46 | 322 | 1.67e-15 | 79.3 |
MS.gene015655.t1 | MTR_8g068990 | 24.340 | 341 | 209 | 8 | 103 | 422 | 47 | 359 | 8.42e-15 | 77.0 |
MS.gene015655.t1 | MTR_8g073260 | 24.138 | 290 | 183 | 5 | 103 | 380 | 46 | 310 | 6.92e-14 | 74.3 |
MS.gene015655.t1 | MTR_8g039620 | 25.086 | 291 | 182 | 8 | 103 | 380 | 49 | 316 | 8.40e-14 | 73.9 |
MS.gene015655.t1 | MTR_3g085830 | 27.706 | 231 | 142 | 6 | 69 | 276 | 144 | 372 | 2.21e-13 | 73.2 |
MS.gene015655.t1 | MTR_1g059930 | 26.351 | 296 | 169 | 9 | 103 | 380 | 47 | 311 | 2.91e-13 | 72.4 |
MS.gene015655.t1 | MTR_7g021090 | 28.095 | 210 | 129 | 5 | 103 | 299 | 44 | 244 | 1.04e-12 | 70.5 |
MS.gene015655.t1 | MTR_5g085830 | 23.799 | 437 | 285 | 13 | 62 | 469 | 240 | 657 | 1.17e-12 | 71.2 |
MS.gene015655.t1 | MTR_8g072510 | 25.234 | 214 | 140 | 3 | 103 | 304 | 45 | 250 | 2.48e-12 | 69.3 |
MS.gene015655.t1 | MTR_7g451420 | 25.789 | 190 | 128 | 2 | 103 | 280 | 44 | 232 | 5.76e-12 | 67.4 |
MS.gene015655.t1 | MTR_8g066670 | 22.636 | 349 | 216 | 8 | 103 | 422 | 1110 | 1433 | 7.41e-12 | 68.9 |
MS.gene015655.t1 | MTR_7g099570 | 26.291 | 213 | 145 | 5 | 103 | 304 | 44 | 255 | 2.68e-11 | 66.6 |
MS.gene015655.t1 | MTR_3g016210 | 22.000 | 300 | 188 | 5 | 103 | 380 | 45 | 320 | 4.13e-11 | 65.5 |
MS.gene015655.t1 | MTR_2g096760 | 27.273 | 220 | 128 | 9 | 62 | 260 | 11 | 219 | 7.42e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015655.t1 | AT2G01680 | 69.316 | 541 | 156 | 5 | 1 | 540 | 1 | 532 | 0.0 | 745 |
MS.gene015655.t1 | AT1G07710 | 44.841 | 504 | 260 | 8 | 47 | 540 | 48 | 543 | 8.12e-129 | 387 |
MS.gene015655.t1 | AT1G07710 | 44.841 | 504 | 260 | 8 | 47 | 540 | 48 | 543 | 8.12e-129 | 387 |
MS.gene015655.t1 | AT2G31820 | 45.030 | 493 | 257 | 7 | 54 | 540 | 178 | 662 | 8.62e-125 | 380 |
MS.gene015655.t1 | AT5G60070 | 42.412 | 514 | 264 | 8 | 14 | 515 | 36 | 529 | 3.02e-122 | 370 |
MS.gene015655.t1 | AT1G05640 | 44.848 | 495 | 256 | 8 | 54 | 540 | 142 | 627 | 9.59e-121 | 369 |
MS.gene015655.t1 | AT3G12360 | 40.230 | 522 | 294 | 6 | 21 | 540 | 73 | 578 | 1.65e-116 | 357 |
MS.gene015655.t1 | AT3G12360 | 40.230 | 522 | 294 | 6 | 21 | 540 | 85 | 590 | 3.36e-116 | 356 |
MS.gene015655.t1 | AT5G02620 | 42.324 | 482 | 249 | 5 | 24 | 492 | 27 | 492 | 1.54e-115 | 352 |
MS.gene015655.t1 | AT5G02620 | 42.324 | 482 | 249 | 5 | 24 | 492 | 27 | 492 | 1.54e-115 | 352 |
MS.gene015655.t1 | AT5G02620 | 42.324 | 482 | 249 | 5 | 24 | 492 | 27 | 492 | 1.54e-115 | 352 |
MS.gene015655.t1 | AT3G09550 | 40.038 | 522 | 298 | 8 | 21 | 540 | 106 | 614 | 5.83e-112 | 346 |
MS.gene015655.t1 | AT3G09550 | 40.038 | 522 | 298 | 8 | 21 | 540 | 99 | 607 | 7.07e-112 | 345 |
MS.gene015655.t1 | AT3G09550 | 40.038 | 522 | 298 | 8 | 21 | 540 | 99 | 607 | 7.07e-112 | 345 |
MS.gene015655.t1 | AT5G02620 | 40.594 | 505 | 248 | 6 | 24 | 492 | 27 | 515 | 7.20e-111 | 341 |
MS.gene015655.t1 | AT5G02620 | 40.594 | 505 | 248 | 6 | 24 | 492 | 27 | 515 | 7.20e-111 | 341 |
MS.gene015655.t1 | AT5G54710 | 27.105 | 487 | 311 | 12 | 57 | 506 | 94 | 573 | 3.10e-39 | 151 |
MS.gene015655.t1 | AT5G54710 | 27.105 | 487 | 311 | 12 | 57 | 506 | 139 | 618 | 6.06e-39 | 151 |
MS.gene015655.t1 | AT1G34050 | 26.020 | 392 | 264 | 8 | 112 | 494 | 162 | 536 | 4.05e-34 | 136 |
MS.gene015655.t1 | AT2G24600 | 21.861 | 462 | 311 | 9 | 56 | 485 | 96 | 539 | 2.32e-31 | 128 |
MS.gene015655.t1 | AT2G24600 | 21.861 | 462 | 311 | 9 | 56 | 485 | 96 | 539 | 2.32e-31 | 128 |
MS.gene015655.t1 | AT1G10340 | 22.326 | 430 | 290 | 10 | 56 | 459 | 96 | 507 | 1.17e-25 | 111 |
MS.gene015655.t1 | AT1G10340 | 22.222 | 531 | 301 | 14 | 12 | 459 | 2 | 503 | 2.54e-25 | 110 |
MS.gene015655.t1 | AT5G51160 | 27.273 | 341 | 202 | 10 | 131 | 438 | 44 | 371 | 1.33e-22 | 100 |
MS.gene015655.t1 | AT4G03460 | 25.077 | 323 | 205 | 5 | 105 | 422 | 205 | 495 | 3.36e-22 | 100 |
MS.gene015655.t1 | AT4G03460 | 25.077 | 323 | 205 | 5 | 105 | 422 | 237 | 527 | 3.52e-22 | 100 |
MS.gene015655.t1 | AT5G54700 | 24.716 | 352 | 206 | 10 | 163 | 505 | 26 | 327 | 7.12e-22 | 97.4 |
MS.gene015655.t1 | AT1G03670 | 23.490 | 447 | 299 | 7 | 56 | 492 | 171 | 584 | 1.26e-21 | 99.4 |
MS.gene015655.t1 | AT4G03500 | 22.588 | 425 | 282 | 7 | 62 | 477 | 212 | 598 | 1.60e-20 | 95.9 |
MS.gene015655.t1 | AT4G03500 | 22.588 | 425 | 282 | 7 | 62 | 477 | 189 | 575 | 2.28e-20 | 95.5 |
MS.gene015655.t1 | AT4G03500 | 22.588 | 425 | 282 | 7 | 62 | 477 | 189 | 575 | 2.28e-20 | 95.5 |
MS.gene015655.t1 | AT4G10720 | 24.781 | 343 | 218 | 10 | 103 | 429 | 40 | 358 | 3.27e-19 | 90.5 |
MS.gene015655.t1 | AT2G24600 | 23.416 | 363 | 234 | 8 | 56 | 392 | 96 | 440 | 3.94e-19 | 91.3 |
MS.gene015655.t1 | AT2G24600 | 23.416 | 363 | 234 | 8 | 56 | 392 | 96 | 440 | 3.94e-19 | 91.3 |
MS.gene015655.t1 | AT4G10720 | 28.509 | 228 | 147 | 4 | 103 | 316 | 40 | 265 | 4.75e-19 | 90.1 |
MS.gene015655.t1 | AT4G03490 | 22.768 | 448 | 313 | 11 | 49 | 476 | 118 | 552 | 2.68e-18 | 89.0 |
MS.gene015655.t1 | AT4G03490 | 22.768 | 448 | 313 | 11 | 49 | 476 | 128 | 562 | 3.26e-18 | 88.6 |
MS.gene015655.t1 | AT4G03490 | 22.768 | 448 | 313 | 11 | 49 | 476 | 128 | 562 | 4.94e-18 | 88.2 |
MS.gene015655.t1 | AT4G03490 | 23.235 | 439 | 284 | 10 | 49 | 476 | 108 | 504 | 5.03e-18 | 88.2 |
MS.gene015655.t1 | AT4G03490 | 23.235 | 439 | 284 | 10 | 49 | 476 | 118 | 514 | 5.28e-18 | 87.8 |
MS.gene015655.t1 | AT5G50140 | 23.094 | 446 | 280 | 14 | 65 | 456 | 27 | 463 | 1.98e-17 | 85.9 |
MS.gene015655.t1 | AT4G03440 | 22.362 | 398 | 285 | 7 | 105 | 498 | 311 | 688 | 6.22e-17 | 84.7 |
MS.gene015655.t1 | AT4G03440 | 22.362 | 398 | 285 | 7 | 105 | 498 | 311 | 688 | 6.22e-17 | 84.7 |
MS.gene015655.t1 | AT4G03440 | 22.362 | 398 | 285 | 7 | 105 | 498 | 318 | 695 | 6.38e-17 | 84.7 |
MS.gene015655.t1 | AT5G54700 | 31.126 | 151 | 100 | 2 | 343 | 489 | 200 | 350 | 3.55e-16 | 81.6 |
MS.gene015655.t1 | AT4G03480 | 24.138 | 377 | 245 | 9 | 60 | 422 | 310 | 659 | 9.56e-16 | 80.9 |
MS.gene015655.t1 | AT4G03480 | 24.138 | 377 | 245 | 9 | 60 | 422 | 307 | 656 | 1.01e-15 | 80.9 |
MS.gene015655.t1 | AT5G15500 | 23.393 | 389 | 208 | 9 | 100 | 424 | 2 | 364 | 7.06e-15 | 77.4 |
MS.gene015655.t1 | AT4G14390 | 22.014 | 427 | 291 | 8 | 56 | 472 | 220 | 614 | 1.43e-14 | 77.0 |
MS.gene015655.t1 | AT4G14390 | 22.703 | 370 | 253 | 6 | 105 | 472 | 295 | 633 | 2.07e-14 | 76.6 |
MS.gene015655.t1 | AT3G04140 | 28.125 | 288 | 175 | 7 | 14 | 276 | 106 | 386 | 5.43e-14 | 75.5 |
MS.gene015655.t1 | AT1G14480 | 27.826 | 230 | 148 | 5 | 103 | 316 | 40 | 267 | 5.51e-14 | 74.7 |
MS.gene015655.t1 | AT5G54610 | 24.199 | 281 | 183 | 6 | 103 | 372 | 40 | 301 | 7.57e-14 | 73.9 |
MS.gene015655.t1 | AT4G14390 | 23.077 | 364 | 244 | 7 | 111 | 472 | 305 | 634 | 8.03e-14 | 74.7 |
MS.gene015655.t1 | AT5G54620 | 25.806 | 186 | 126 | 2 | 103 | 276 | 40 | 225 | 9.10e-13 | 70.9 |
MS.gene015655.t1 | AT1G14500 | 28.571 | 189 | 117 | 5 | 103 | 276 | 40 | 225 | 8.10e-11 | 64.7 |
Find 102 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGTGGTAAATGCTATTT+TGG | 0.194879 | 4.4:-2093596 | MS.gene015655:CDS |
AAAACTCGCCGACGAGTTTC+CGG | 0.220434 | 4.4:-2092407 | MS.gene015655:CDS |
CATATTCTGAAAGTGCTTCT+TGG | 0.231591 | 4.4:+2092537 | None:intergenic |
GCTATTACCATAACTGGTTT+AGG | 0.239123 | 4.4:-2091999 | MS.gene015655:CDS |
TTTCGCCTCAATAGCATTCT+TGG | 0.274513 | 4.4:-2092306 | MS.gene015655:CDS |
CAAGAAGCACTTTCAGAATA+TGG | 0.283596 | 4.4:-2092536 | MS.gene015655:CDS |
TTGGACTGCGGCAGCATATA+GGG | 0.294971 | 4.4:+2093627 | None:intergenic |
TGGATGGCTATTACCATAAC+TGG | 0.303698 | 4.4:-2092005 | MS.gene015655:CDS |
CTATTACCATAACTGGTTTA+GGG | 0.304499 | 4.4:-2091998 | MS.gene015655:CDS |
ATCACATAATTTGATCAAAA+AGG | 0.308077 | 4.4:+2094285 | None:intergenic |
AACCACTGTGACAGAGTTAA+TGG | 0.309857 | 4.4:+2092337 | None:intergenic |
TGTTTCTTGTTGCTTATTGA+TGG | 0.315784 | 4.4:+2092610 | None:intergenic |
TCTTTGATGCAAACTATTCC+TGG | 0.318592 | 4.4:+2093463 | None:intergenic |
CTTGGCTATATTCAATTTGC+CGG | 0.319423 | 4.4:-2092288 | MS.gene015655:CDS |
CTTGGACTGCGGCAGCATAT+AGG | 0.333630 | 4.4:+2093626 | None:intergenic |
ACAAGAAACAGCCTTGGATT+TGG | 0.348845 | 4.4:-2092597 | MS.gene015655:CDS |
TTCAAATCACTTTGGTAGCT+TGG | 0.363305 | 4.4:-2092145 | MS.gene015655:CDS |
TTACCACATCCAAGTGATCT+TGG | 0.370317 | 4.4:+2093608 | None:intergenic |
GCACTTATTGTCCGTGATCC+AGG | 0.413807 | 4.4:-2093481 | MS.gene015655:CDS |
GTTGGATCTGGAGACCTTGA+TGG | 0.415237 | 4.4:-2094478 | MS.gene015655:CDS |
TCAAATCACTTTGGTAGCTT+GGG | 0.417875 | 4.4:-2092144 | MS.gene015655:CDS |
CTGCACTACATAATGCTGTT+AGG | 0.423394 | 4.4:-2093528 | MS.gene015655:CDS |
TTTCAATTCCTTAGCTATAC+CGG | 0.426970 | 4.4:+2092388 | None:intergenic |
AGGTCAAACTGCGCTACATA+TGG | 0.431611 | 4.4:-2093434 | MS.gene015655:CDS |
TAGGGATACCTATTCTAGTT+GGG | 0.436179 | 4.4:-2091980 | MS.gene015655:CDS |
TCTCGTTCGTTCAATATAGT+AGG | 0.439653 | 4.4:+2093361 | None:intergenic |
ACTGTTAGAGAAGCTTAATA+AGG | 0.441562 | 4.4:-2094446 | MS.gene015655:CDS |
ATATTCACCACAGTTGGATC+TGG | 0.453733 | 4.4:-2094490 | MS.gene015655:CDS |
TTAGGGATACCTATTCTAGT+TGG | 0.455818 | 4.4:-2091981 | MS.gene015655:CDS |
TGCGTCTCTGCGAATCACTT+TGG | 0.457508 | 4.4:+2091907 | None:intergenic |
GAAGATGGTGATAGAAGTAA+TGG | 0.458453 | 4.4:-2094421 | MS.gene015655:CDS |
AGGTATCCCTAAACCAGTTA+TGG | 0.460403 | 4.4:+2091992 | None:intergenic |
GCAGCTAAGCGTGGCCATCT+TGG | 0.468196 | 4.4:-2094211 | MS.gene015655:intron |
ATTATGAAAGGATCACATAT+AGG | 0.475016 | 4.4:-2092257 | MS.gene015655:CDS |
AAGCTTAATAAGGAAGAAGA+TGG | 0.476184 | 4.4:-2094436 | MS.gene015655:CDS |
ATTGAACGAACGAGATAAGA+AGG | 0.492542 | 4.4:-2093353 | MS.gene015655:CDS |
ACAGTTTCTTCAACCCATCA+AGG | 0.495729 | 4.4:+2094464 | None:intergenic |
TTGGCAGATAAACTGCCATA+TGG | 0.504776 | 4.4:-2092578 | MS.gene015655:CDS |
AGACGCATCAAGAGAGCAAG+TGG | 0.505968 | 4.4:-2091891 | MS.gene015655:CDS |
CTTTGGTAGCTTGGGACACA+AGG | 0.509015 | 4.4:-2092136 | MS.gene015655:CDS |
CAATAAGTGCTTTCACAATA+CGG | 0.511144 | 4.4:+2093494 | None:intergenic |
TCTAAAGCTGACGATCCATA+TGG | 0.511646 | 4.4:+2092563 | None:intergenic |
CAATCAATATTCACCACAGT+TGG | 0.516406 | 4.4:-2094496 | MS.gene015655:CDS |
GCCAGAGTCCCAACTAGAAT+AGG | 0.516542 | 4.4:+2091972 | None:intergenic |
CCGGGTCAATATATTATGAA+AGG | 0.520442 | 4.4:-2092269 | MS.gene015655:CDS |
TACGCGGAAAGGCCGGTCAC+AGG | 0.521929 | 4.4:-2093308 | MS.gene015655:intron |
CTACATAATGCTGTTAGGTA+TGG | 0.523561 | 4.4:-2093523 | MS.gene015655:CDS |
CTTCACATGGCTACGCGGAA+AGG | 0.523901 | 4.4:-2093319 | MS.gene015655:CDS |
GTCACACAACTTACAAACCT+CGG | 0.525962 | 4.4:+2093666 | None:intergenic |
CTGTTGTTAACAAGCTAATG+TGG | 0.526218 | 4.4:-2092094 | MS.gene015655:CDS |
AGAATGCTATTGAGGCGAAA+AGG | 0.530984 | 4.4:+2092309 | None:intergenic |
AACATCATCTTCATCTATGT+CGG | 0.533622 | 4.4:-2094392 | MS.gene015655:CDS |
ACATGGCTACGCGGAAAGGC+CGG | 0.534860 | 4.4:-2093315 | MS.gene015655:CDS |
ACCTATTCTAGTTGGGACTC+TGG | 0.537549 | 4.4:-2091973 | MS.gene015655:CDS |
ACAGAGTACATCAGTGGTGG+AGG | 0.543153 | 4.4:-2093401 | MS.gene015655:CDS |
TTGGCTATATTCAATTTGCC+GGG | 0.547911 | 4.4:-2092287 | MS.gene015655:CDS |
TAAGCAACAAGAAACAGCCT+TGG | 0.552301 | 4.4:-2092603 | MS.gene015655:CDS |
CAACTTACAAACCTCGGGCC+AGG | 0.555562 | 4.4:+2093672 | None:intergenic |
TATAGCCAAGAATGCTATTG+AGG | 0.559760 | 4.4:+2092301 | None:intergenic |
TCTAACATTGCGGATCATGT+TGG | 0.560863 | 4.4:-2092230 | MS.gene015655:CDS |
GCTAAATATGCAAGACATGT+TGG | 0.561894 | 4.4:-2092512 | MS.gene015655:CDS |
GTGGAAGCAAATCCTTCTCA+TGG | 0.564022 | 4.4:-2091872 | MS.gene015655:CDS |
TCACACAACTTACAAACCTC+GGG | 0.565097 | 4.4:+2093667 | None:intergenic |
TGCGGCAGCATATAGGGGAC+TGG | 0.565490 | 4.4:+2093633 | None:intergenic |
AAGATGGTGATAGAAGTAAT+GGG | 0.566107 | 4.4:-2094420 | MS.gene015655:CDS |
ATCCAAGTGATCTTGGACTG+CGG | 0.566122 | 4.4:+2093615 | None:intergenic |
TTGGATCTGGAGACCTTGAT+GGG | 0.566977 | 4.4:-2094477 | MS.gene015655:CDS |
TGCCGCAGTCCAAGATCACT+TGG | 0.567594 | 4.4:-2093617 | MS.gene015655:CDS |
TGTTGTTGTTCAAATCACTT+TGG | 0.570912 | 4.4:-2092153 | MS.gene015655:CDS |
TGGACTGCGGCAGCATATAG+GGG | 0.571980 | 4.4:+2093628 | None:intergenic |
CAACTGTGGTGAATATTGAT+TGG | 0.577431 | 4.4:+2094497 | None:intergenic |
TAGCTATACCGGAAACTCGT+CGG | 0.577902 | 4.4:+2092399 | None:intergenic |
CAGTTTATCTGCCAAATCCA+AGG | 0.577959 | 4.4:+2092586 | None:intergenic |
ATGTCTCTTCAAAATGATCA+TGG | 0.578765 | 4.4:-2094358 | MS.gene015655:CDS |
GCGCTACATATGGCTGTCAA+AGG | 0.582666 | 4.4:-2093424 | MS.gene015655:CDS |
GAATGAGTTTAACCTGTGAC+CGG | 0.583506 | 4.4:+2093296 | None:intergenic |
GGGTAATACCGCTCTTCACA+TGG | 0.583634 | 4.4:-2093332 | MS.gene015655:CDS |
CCTTTCATAATATATTGACC+CGG | 0.584046 | 4.4:+2092269 | None:intergenic |
TTTCATGTTGCAGCTAAGCG+TGG | 0.587939 | 4.4:-2094220 | MS.gene015655:CDS |
TTTGCTAAGCTATGCAGCTG+TGG | 0.589326 | 4.4:-2092642 | MS.gene015655:CDS |
GCTGCTTGTGCTTGCACGTG+CGG | 0.591233 | 4.4:-2092071 | MS.gene015655:CDS |
ACGAGTTTCCGGTATAGCTA+AGG | 0.593408 | 4.4:-2092396 | MS.gene015655:CDS |
CTGTGGTGAATATTGATTGG+TGG | 0.599501 | 4.4:+2094500 | None:intergenic |
AGCTGCACACAATAATCTCA+AGG | 0.604525 | 4.4:-2094317 | MS.gene015655:CDS |
AGTCCAAGATCACTTGGATG+TGG | 0.606081 | 4.4:-2093611 | MS.gene015655:CDS |
TGGTAAAGTAGATGAAGCCA+TGG | 0.615814 | 4.4:-2092492 | MS.gene015655:CDS |
CCGCTCTTCACATGGCTACG+CGG | 0.621597 | 4.4:-2093324 | MS.gene015655:CDS |
TTGAACGAACGAGATAAGAA+GGG | 0.622382 | 4.4:-2093352 | MS.gene015655:CDS |
TGCAAACTATTCCTGGATCA+CGG | 0.623341 | 4.4:+2093470 | None:intergenic |
TGTGGTGAATATTGATTGGT+GGG | 0.623793 | 4.4:+2094501 | None:intergenic |
TTGTGTGCAGCTATGTAAAG+TGG | 0.624900 | 4.4:+2094328 | None:intergenic |
GAATAAGTAGAATACCAAGA+TGG | 0.625558 | 4.4:+2094197 | None:intergenic |
TGTTGTTAACAAGCTAATGT+GGG | 0.633610 | 4.4:-2092093 | MS.gene015655:CDS |
TGCAGAGTAAGACCATGAGA+AGG | 0.634865 | 4.4:+2091860 | None:intergenic |
TTTGGTAGCTTGGGACACAA+GGG | 0.645817 | 4.4:-2092135 | MS.gene015655:CDS |
AGGACAGAGTACATCAGTGG+TGG | 0.646873 | 4.4:-2093404 | MS.gene015655:CDS |
AGTGAGTGATATAAAGCATG+AGG | 0.658021 | 4.4:-2092456 | MS.gene015655:CDS |
CACCATTAACTCTGTCACAG+TGG | 0.670427 | 4.4:-2092339 | MS.gene015655:CDS |
CCGCGTAGCCATGTGAAGAG+CGG | 0.680358 | 4.4:+2093324 | None:intergenic |
CAAAGGACAGAGTACATCAG+TGG | 0.688738 | 4.4:-2093407 | MS.gene015655:CDS |
TATAGGAGAATCTAACATTG+CGG | 0.704490 | 4.4:-2092240 | MS.gene015655:CDS |
AAGGTCTCCAGATCCAACTG+TGG | 0.733074 | 4.4:+2094483 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTTTATAGTTAGAAAAAA+TGG | - | chr4.4:2092776-2092795 | MS.gene015655:intron | 15.0% |
!! | ATTAATGAACTTTACAATTA+AGG | + | chr4.4:2092288-2092307 | None:intergenic | 15.0% |
!! | TGTTTATAGTTAGAAAAAAT+GGG | - | chr4.4:2092777-2092796 | MS.gene015655:intron | 15.0% |
!!! | ATTTTTTCTAACTATAAACA+TGG | + | chr4.4:2092777-2092796 | None:intergenic | 15.0% |
!! | ATCACATAATTTGATCAAAA+AGG | + | chr4.4:2092050-2092069 | None:intergenic | 20.0% |
!!! | AAAGTATCTACAACTATATA+TGG | + | chr4.4:2093069-2093088 | None:intergenic | 20.0% |
!!! | TGTTGTACATCTTTTAAATT+TGG | - | chr4.4:2092412-2092431 | MS.gene015655:CDS | 20.0% |
!!! | TTTTTTCTTTTCTTTTGTGT+TGG | - | chr4.4:2092164-2092183 | MS.gene015655:CDS | 20.0% |
! | AAAGACAAGCAAATTATGAA+AGG | + | chr4.4:2093590-2093609 | None:intergenic | 25.0% |
! | AAATATTAAGAACCTGTGTT+TGG | - | chr4.4:2092199-2092218 | MS.gene015655:CDS | 25.0% |
! | ACATTAATGTAAGTCTAATG+TGG | - | chr4.4:2093273-2093292 | MS.gene015655:intron | 25.0% |
! | AGGCTCATTTATATACATAA+TGG | - | chr4.4:2093544-2093563 | MS.gene015655:CDS | 25.0% |
! | ATTATGAAAGGATCACATAT+AGG | - | chr4.4:2094075-2094094 | MS.gene015655:intron | 25.0% |
! | CAACAAAAATACAAAATGAG+AGG | + | chr4.4:2093630-2093649 | None:intergenic | 25.0% |
! | CAATACTAGTTAATTACAAC+TGG | - | chr4.4:2093412-2093431 | MS.gene015655:CDS | 25.0% |
! | CTTACATTGCATAATTGTAA+TGG | - | chr4.4:2092521-2092540 | MS.gene015655:CDS | 25.0% |
! | GTTTGCATCAAAGATAAAAA+AGG | - | chr4.4:2092878-2092897 | MS.gene015655:intron | 25.0% |
!! | TGTTTGGATATTGCTATTAT+TGG | - | chr4.4:2092215-2092234 | MS.gene015655:CDS | 25.0% |
!!! | AAGATTGTAACATTTGCTAT+CGG | + | chr4.4:2092554-2092573 | None:intergenic | 25.0% |
!!! | ATGCTTGAACTTTTTTCTAT+AGG | - | chr4.4:2093230-2093249 | MS.gene015655:intron | 25.0% |
!!! | TTTGTTTTTCGACAACATTT+TGG | - | chr4.4:2094396-2094415 | MS.gene015655:CDS | 25.0% |
AACATCATCTTCATCTATGT+CGG | - | chr4.4:2091940-2091959 | MS.gene015655:CDS | 30.0% | |
AAGATGGTGATAGAAGTAAT+GGG | - | chr4.4:2091912-2091931 | MS.gene015655:CDS | 30.0% | |
AAGCTTAATAAGGAAGAAGA+TGG | - | chr4.4:2091896-2091915 | MS.gene015655:CDS | 30.0% | |
AATTTCATGTTAAACGTCGT+TGG | - | chr4.4:2093302-2093321 | MS.gene015655:intron | 30.0% | |
ACTGTTAGAGAAGCTTAATA+AGG | - | chr4.4:2091886-2091905 | MS.gene015655:CDS | 30.0% | |
AGGTTGTTGGAAAGAAAAAA+TGG | - | chr4.4:2094307-2094326 | MS.gene015655:CDS | 30.0% | |
ATAAGGAATGAGGATAGTTT+AGG | + | chr4.4:2093518-2093537 | None:intergenic | 30.0% | |
ATGTCTCTTCAAAATGATCA+TGG | - | chr4.4:2091974-2091993 | MS.gene015655:CDS | 30.0% | |
CAATAAGTGCTTTCACAATA+CGG | + | chr4.4:2092841-2092860 | None:intergenic | 30.0% | |
CCTTTCATAATATATTGACC+CGG | + | chr4.4:2094066-2094085 | None:intergenic | 30.0% | |
GAATAAGTAGAATACCAAGA+TGG | + | chr4.4:2092138-2092157 | None:intergenic | 30.0% | |
TAAATGAGCCTCAACTAATA+AGG | + | chr4.4:2093535-2093554 | None:intergenic | 30.0% | |
TAAGGAATGAGGATAGTTTA+GGG | + | chr4.4:2093517-2093536 | None:intergenic | 30.0% | |
TAATAGCAATATCCAAACAC+AGG | + | chr4.4:2092214-2092233 | None:intergenic | 30.0% | |
TATAGGAGAATCTAACATTG+CGG | - | chr4.4:2094092-2094111 | MS.gene015655:intron | 30.0% | |
TCTACTTACTAGGATAGAAT+TGG | - | chr4.4:2092486-2092505 | MS.gene015655:CDS | 30.0% | |
TGTTGGAAAGAAAAAATGGA+TGG | - | chr4.4:2094311-2094330 | MS.gene015655:CDS | 30.0% | |
TGTTGTTAACAAGCTAATGT+GGG | - | chr4.4:2094239-2094258 | MS.gene015655:CDS | 30.0% | |
TTCAATTACACGAAGTTTCA+GGG | - | chr4.4:2092316-2092335 | MS.gene015655:CDS | 30.0% | |
TTGTTGTCTTTACTGACAAA+TGG | - | chr4.4:2093644-2093663 | MS.gene015655:CDS | 30.0% | |
TTTCAATTCCTTAGCTATAC+CGG | + | chr4.4:2093947-2093966 | None:intergenic | 30.0% | |
! | CTATTACCATAACTGGTTTA+GGG | - | chr4.4:2094334-2094353 | MS.gene015655:CDS | 30.0% |
! | TGTTGTTGTTCAAATCACTT+TGG | - | chr4.4:2094179-2094198 | MS.gene015655:intron | 30.0% |
! | TGTTTCTTGTTGCTTATTGA+TGG | + | chr4.4:2093725-2093744 | None:intergenic | 30.0% |
!!! | ACTTTTTTCCAGATATTGTG+AGG | - | chr4.4:2092624-2092643 | MS.gene015655:CDS | 30.0% |
!!! | CTTTTTTCCAGATATTGTGA+GGG | - | chr4.4:2092625-2092644 | MS.gene015655:CDS | 30.0% |
AAAATCTCCCTCACAATATC+TGG | + | chr4.4:2092635-2092654 | None:intergenic | 35.0% | |
AGTGAGTGATATAAAGCATG+AGG | - | chr4.4:2093876-2093895 | MS.gene015655:intron | 35.0% | |
ATTGAACGAACGAGATAAGA+AGG | - | chr4.4:2092979-2092998 | MS.gene015655:intron | 35.0% | |
ATTGGATGAACTGTGTTTCA+GGG | - | chr4.4:2092233-2092252 | MS.gene015655:CDS | 35.0% | |
CAACTGTGGTGAATATTGAT+TGG | + | chr4.4:2091838-2091857 | None:intergenic | 35.0% | |
CAATCAATATTCACCACAGT+TGG | - | chr4.4:2091836-2091855 | MS.gene015655:CDS | 35.0% | |
CATGTGAAGATCTACTTACT+AGG | - | chr4.4:2092476-2092495 | MS.gene015655:CDS | 35.0% | |
CCGGGTCAATATATTATGAA+AGG | - | chr4.4:2094063-2094082 | MS.gene015655:intron | 35.0% | |
CTACATAATGCTGTTAGGTA+TGG | - | chr4.4:2092809-2092828 | MS.gene015655:intron | 35.0% | |
CTGTTGTTAACAAGCTAATG+TGG | - | chr4.4:2094238-2094257 | MS.gene015655:CDS | 35.0% | |
CTTGGCTATATTCAATTTGC+CGG | - | chr4.4:2094044-2094063 | MS.gene015655:intron | 35.0% | |
GAAGATGGTGATAGAAGTAA+TGG | - | chr4.4:2091911-2091930 | MS.gene015655:CDS | 35.0% | |
GCTAAATATGCAAGACATGT+TGG | - | chr4.4:2093820-2093839 | MS.gene015655:intron | 35.0% | |
GGCTGTGTAAATTTAAGCTA+TGG | - | chr4.4:2093471-2093490 | MS.gene015655:CDS | 35.0% | |
GTTCAATTACACGAAGTTTC+AGG | - | chr4.4:2092315-2092334 | MS.gene015655:CDS | 35.0% | |
TATAGCCAAGAATGCTATTG+AGG | + | chr4.4:2094034-2094053 | None:intergenic | 35.0% | |
TATTGGATGAACTGTGTTTC+AGG | - | chr4.4:2092232-2092251 | MS.gene015655:CDS | 35.0% | |
TCCTCATTCCTTATTAGTTG+AGG | - | chr4.4:2093524-2093543 | MS.gene015655:CDS | 35.0% | |
TCTCGTTCGTTCAATATAGT+AGG | + | chr4.4:2092974-2092993 | None:intergenic | 35.0% | |
TCTTTGATGCAAACTATTCC+TGG | + | chr4.4:2092872-2092891 | None:intergenic | 35.0% | |
TTAGGGATACCTATTCTAGT+TGG | - | chr4.4:2094351-2094370 | MS.gene015655:CDS | 35.0% | |
TTGAACGAACGAGATAAGAA+GGG | - | chr4.4:2092980-2092999 | MS.gene015655:intron | 35.0% | |
TTGGCTATATTCAATTTGCC+GGG | - | chr4.4:2094045-2094064 | MS.gene015655:intron | 35.0% | |
! | CTTGGATTTTTCCATCATCT+CGG | + | chr4.4:2093144-2093163 | None:intergenic | 35.0% |
! | GCTATTACCATAACTGGTTT+AGG | - | chr4.4:2094333-2094352 | MS.gene015655:CDS | 35.0% |
! | TAACTAGTATTGAGAACTCG+TGG | + | chr4.4:2093404-2093423 | None:intergenic | 35.0% |
! | TAGGGATACCTATTCTAGTT+GGG | - | chr4.4:2094352-2094371 | MS.gene015655:CDS | 35.0% |
! | TCAAATCACTTTGGTAGCTT+GGG | - | chr4.4:2094188-2094207 | MS.gene015655:intron | 35.0% |
! | TGTGGTGAATATTGATTGGT+GGG | + | chr4.4:2091834-2091853 | None:intergenic | 35.0% |
! | TTCAAATCACTTTGGTAGCT+TGG | - | chr4.4:2094187-2094206 | MS.gene015655:intron | 35.0% |
!! | CAAGAAGCACTTTCAGAATA+TGG | - | chr4.4:2093796-2093815 | MS.gene015655:intron | 35.0% |
!! | CATATTCTGAAAGTGCTTCT+TGG | + | chr4.4:2093798-2093817 | None:intergenic | 35.0% |
!! | GGATGTGGTAAATGCTATTT+TGG | - | chr4.4:2092736-2092755 | MS.gene015655:intron | 35.0% |
!!! | CACTGTTCTTTTAAGTTCCA+TGG | + | chr4.4:2093860-2093879 | None:intergenic | 35.0% |
!!! | GGTCTTGGATTTTAAAGCAT+AGG | - | chr4.4:2093450-2093469 | MS.gene015655:CDS | 35.0% |
!!! | TTTTTTGGCAATCGCTTTTG+AGG | - | chr4.4:2094287-2094306 | MS.gene015655:CDS | 35.0% |
AACCACTGTGACAGAGTTAA+TGG | + | chr4.4:2093998-2094017 | None:intergenic | 40.0% | |
ACAAGAAACAGCCTTGGATT+TGG | - | chr4.4:2093735-2093754 | MS.gene015655:intron | 40.0% | |
ACAGTTTCTTCAACCCATCA+AGG | + | chr4.4:2091871-2091890 | None:intergenic | 40.0% | |
AGAATGCTATTGAGGCGAAA+AGG | + | chr4.4:2094026-2094045 | None:intergenic | 40.0% | |
AGCTGCACACAATAATCTCA+AGG | - | chr4.4:2092015-2092034 | MS.gene015655:CDS | 40.0% | |
AGGTATCCCTAAACCAGTTA+TGG | + | chr4.4:2094343-2094362 | None:intergenic | 40.0% | |
ATATTCACCACAGTTGGATC+TGG | - | chr4.4:2091842-2091861 | MS.gene015655:CDS | 40.0% | |
CAGTTTATCTGCCAAATCCA+AGG | + | chr4.4:2093749-2093768 | None:intergenic | 40.0% | |
CTGCACTACATAATGCTGTT+AGG | - | chr4.4:2092804-2092823 | MS.gene015655:intron | 40.0% | |
GAATGAGTTTAACCTGTGAC+CGG | + | chr4.4:2093039-2093058 | None:intergenic | 40.0% | |
GACTTCCTGGAATGAATGAT+AGG | - | chr4.4:2093163-2093182 | MS.gene015655:intron | 40.0% | |
GCCTCAACTAATAAGGAATG+AGG | + | chr4.4:2093528-2093547 | None:intergenic | 40.0% | |
GTCACACAACTTACAAACCT+CGG | + | chr4.4:2092669-2092688 | None:intergenic | 40.0% | |
TAAGCAACAAGAAACAGCCT+TGG | - | chr4.4:2093729-2093748 | MS.gene015655:intron | 40.0% | |
TCACACAACTTACAAACCTC+GGG | + | chr4.4:2092668-2092687 | None:intergenic | 40.0% | |
TCATTCATTCCAGGAAGTCT+TGG | + | chr4.4:2093162-2093181 | None:intergenic | 40.0% | |
TCCTGGAATGAATGATAGGA+AGG | - | chr4.4:2093167-2093186 | MS.gene015655:intron | 40.0% | |
TCCTTCCTATCATTCATTCC+AGG | + | chr4.4:2093171-2093190 | None:intergenic | 40.0% | |
TCTAACATTGCGGATCATGT+TGG | - | chr4.4:2094102-2094121 | MS.gene015655:intron | 40.0% | |
TGCAAACTATTCCTGGATCA+CGG | + | chr4.4:2092865-2092884 | None:intergenic | 40.0% | |
TGGAAAAATCCAAGACTTCC+TGG | - | chr4.4:2093150-2093169 | MS.gene015655:intron | 40.0% | |
TGGATGGCTATTACCATAAC+TGG | - | chr4.4:2094327-2094346 | MS.gene015655:CDS | 40.0% | |
TGGTAAAGTAGATGAAGCCA+TGG | - | chr4.4:2093840-2093859 | MS.gene015655:intron | 40.0% | |
TTACCACATCCAAGTGATCT+TGG | + | chr4.4:2092727-2092746 | None:intergenic | 40.0% | |
TTGGCAGATAAACTGCCATA+TGG | - | chr4.4:2093754-2093773 | MS.gene015655:intron | 40.0% | |
TTGTGTGCAGCTATGTAAAG+TGG | + | chr4.4:2092007-2092026 | None:intergenic | 40.0% | |
TTTCGCCTCAATAGCATTCT+TGG | - | chr4.4:2094026-2094045 | MS.gene015655:intron | 40.0% | |
! | AAGCATCATATCACTGGTCT+TGG | - | chr4.4:2093435-2093454 | MS.gene015655:CDS | 40.0% |
! | CTGTGGTGAATATTGATTGG+TGG | + | chr4.4:2091835-2091854 | None:intergenic | 40.0% |
! | TCTAAAGCTGACGATCCATA+TGG | + | chr4.4:2093772-2093791 | None:intergenic | 40.0% |
!! | AACTGGAAGCATCATATCAC+TGG | - | chr4.4:2093429-2093448 | MS.gene015655:CDS | 40.0% |
AAGTTGTCAGTCCGAGATGA+TGG | - | chr4.4:2093130-2093149 | MS.gene015655:intron | 45.0% | |
ACGAGTTTCCGGTATAGCTA+AGG | - | chr4.4:2093936-2093955 | MS.gene015655:intron | 45.0% | |
AGGTCAAACTGCGCTACATA+TGG | - | chr4.4:2092898-2092917 | MS.gene015655:intron | 45.0% | |
AGTCCAAGATCACTTGGATG+TGG | - | chr4.4:2092721-2092740 | MS.gene015655:intron | 45.0% | |
ATCCAAGTGATCTTGGACTG+CGG | + | chr4.4:2092720-2092739 | None:intergenic | 45.0% | |
CAAAGGACAGAGTACATCAG+TGG | - | chr4.4:2092925-2092944 | MS.gene015655:intron | 45.0% | |
CACCATTAACTCTGTCACAG+TGG | - | chr4.4:2093993-2094012 | MS.gene015655:intron | 45.0% | |
GTGGAAGCAAATCCTTCTCA+TGG | - | chr4.4:2094460-2094479 | MS.gene015655:CDS | 45.0% | |
TAGCTATACCGGAAACTCGT+CGG | + | chr4.4:2093936-2093955 | None:intergenic | 45.0% | |
TGCAGAGTAAGACCATGAGA+AGG | + | chr4.4:2094475-2094494 | None:intergenic | 45.0% | |
TTGGATCTGGAGACCTTGAT+GGG | - | chr4.4:2091855-2091874 | MS.gene015655:CDS | 45.0% | |
TTTCATGTTGCAGCTAAGCG+TGG | - | chr4.4:2092112-2092131 | MS.gene015655:CDS | 45.0% | |
TTTGCTAAGCTATGCAGCTG+TGG | - | chr4.4:2093690-2093709 | MS.gene015655:CDS | 45.0% | |
! | ACCTATTCTAGTTGGGACTC+TGG | - | chr4.4:2094359-2094378 | MS.gene015655:CDS | 45.0% |
! | TTTGGTAGCTTGGGACACAA+GGG | - | chr4.4:2094197-2094216 | MS.gene015655:intron | 45.0% |
!!! | GCAATCGCTTTTGAGGTTGT+TGG | - | chr4.4:2094294-2094313 | MS.gene015655:CDS | 45.0% |
AAAACTCGCCGACGAGTTTC+CGG | - | chr4.4:2093925-2093944 | MS.gene015655:intron | 50.0% | |
AAGGTCTCCAGATCCAACTG+TGG | + | chr4.4:2091852-2091871 | None:intergenic | 50.0% | |
ACAGAGTACATCAGTGGTGG+AGG | - | chr4.4:2092931-2092950 | MS.gene015655:intron | 50.0% | |
AGACGCATCAAGAGAGCAAG+TGG | - | chr4.4:2094441-2094460 | MS.gene015655:CDS | 50.0% | |
AGGACAGAGTACATCAGTGG+TGG | - | chr4.4:2092928-2092947 | MS.gene015655:intron | 50.0% | |
GCACTTATTGTCCGTGATCC+AGG | - | chr4.4:2092851-2092870 | MS.gene015655:intron | 50.0% | |
GCCAGAGTCCCAACTAGAAT+AGG | + | chr4.4:2094363-2094382 | None:intergenic | 50.0% | |
GCGCTACATATGGCTGTCAA+AGG | - | chr4.4:2092908-2092927 | MS.gene015655:intron | 50.0% | |
GGGTAATACCGCTCTTCACA+TGG | - | chr4.4:2093000-2093019 | MS.gene015655:intron | 50.0% | |
GTTGGATCTGGAGACCTTGA+TGG | - | chr4.4:2091854-2091873 | MS.gene015655:CDS | 50.0% | |
TGCGTCTCTGCGAATCACTT+TGG | + | chr4.4:2094428-2094447 | None:intergenic | 50.0% | |
TTGGACTGCGGCAGCATATA+GGG | + | chr4.4:2092708-2092727 | None:intergenic | 50.0% | |
! | CTTTGGTAGCTTGGGACACA+AGG | - | chr4.4:2094196-2094215 | MS.gene015655:intron | 50.0% |
!! | TGAGGGAGATTTTGAGTGCC+TGG | - | chr4.4:2092642-2092661 | MS.gene015655:CDS | 50.0% |
CAACTTACAAACCTCGGGCC+AGG | + | chr4.4:2092663-2092682 | None:intergenic | 55.0% | |
CTTCACATGGCTACGCGGAA+AGG | - | chr4.4:2093013-2093032 | MS.gene015655:intron | 55.0% | |
CTTGGACTGCGGCAGCATAT+AGG | + | chr4.4:2092709-2092728 | None:intergenic | 55.0% | |
GAGAACTCGTGGAACGTACG+AGG | + | chr4.4:2093393-2093412 | None:intergenic | 55.0% | |
TGCCGCAGTCCAAGATCACT+TGG | - | chr4.4:2092715-2092734 | MS.gene015655:intron | 55.0% | |
TGGACTGCGGCAGCATATAG+GGG | + | chr4.4:2092707-2092726 | None:intergenic | 55.0% | |
!!! | TTGCACGTGCGGCGCTTTTT+TGG | - | chr4.4:2094272-2094291 | MS.gene015655:CDS | 55.0% |
ACATGGCTACGCGGAAAGGC+CGG | - | chr4.4:2093017-2093036 | MS.gene015655:intron | 60.0% | |
CCGCGTAGCCATGTGAAGAG+CGG | + | chr4.4:2093011-2093030 | None:intergenic | 60.0% | |
CCGCTCTTCACATGGCTACG+CGG | - | chr4.4:2093008-2093027 | MS.gene015655:intron | 60.0% | |
GCAGCTAAGCGTGGCCATCT+TGG | - | chr4.4:2092121-2092140 | MS.gene015655:CDS | 60.0% | |
GCTGCTTGTGCTTGCACGTG+CGG | - | chr4.4:2094261-2094280 | MS.gene015655:CDS | 60.0% | |
TGCGGCAGCATATAGGGGAC+TGG | + | chr4.4:2092702-2092721 | None:intergenic | 60.0% | |
!! | GATTTTGAGTGCCTGGCCCG+AGG | - | chr4.4:2092649-2092668 | MS.gene015655:CDS | 60.0% |
TACGCGGAAAGGCCGGTCAC+AGG | - | chr4.4:2093024-2093043 | MS.gene015655:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 2091803 | 2094551 | 2091803 | ID=MS.gene015655 |
chr4.4 | mRNA | 2091803 | 2094551 | 2091803 | ID=MS.gene015655.t1;Parent=MS.gene015655 |
chr4.4 | exon | 2094212 | 2094551 | 2094212 | ID=MS.gene015655.t1.exon1;Parent=MS.gene015655.t1 |
chr4.4 | CDS | 2094212 | 2094551 | 2094212 | ID=cds.MS.gene015655.t1;Parent=MS.gene015655.t1 |
chr4.4 | exon | 2093309 | 2093718 | 2093309 | ID=MS.gene015655.t1.exon2;Parent=MS.gene015655.t1 |
chr4.4 | CDS | 2093309 | 2093718 | 2093309 | ID=cds.MS.gene015655.t1;Parent=MS.gene015655.t1 |
chr4.4 | exon | 2091803 | 2092675 | 2091803 | ID=MS.gene015655.t1.exon3;Parent=MS.gene015655.t1 |
chr4.4 | CDS | 2091803 | 2092675 | 2091803 | ID=cds.MS.gene015655.t1;Parent=MS.gene015655.t1 |
Gene Sequence |
Protein sequence |