Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068197.t1 | XP_013467371.1 | 99.4 | 330 | 2 | 0 | 1 | 330 | 1 | 330 | 3.00E-191 | 677.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068197.t1 | P49730 | 85.5 | 330 | 47 | 1 | 1 | 330 | 1 | 329 | 2.4e-165 | 582.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068197.t1 | A0A072VJ25 | 99.4 | 330 | 2 | 0 | 1 | 330 | 1 | 330 | 2.2e-191 | 677.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene068197 | 0.832203 | 1.08E-55 | -1.69E-46 |
| MS.gene051742 | MS.gene068197 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene068197 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene051896 | MS.gene068197 | 0.813048 | 3.12E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene068197 | 0.829108 | 6.19E-55 | -1.69E-46 |
| MS.gene051955 | MS.gene068197 | 0.839019 | 2.04E-57 | -1.69E-46 |
| MS.gene052308 | MS.gene068197 | 0.849753 | 2.64E-60 | -1.69E-46 |
| MS.gene052367 | MS.gene068197 | 0.867914 | 9.63E-66 | -1.69E-46 |
| MS.gene053173 | MS.gene068197 | 0.86048 | 2.01E-63 | -1.69E-46 |
| MS.gene053348 | MS.gene068197 | 0.855413 | 6.41E-62 | -1.69E-46 |
| MS.gene053416 | MS.gene068197 | 0.835978 | 1.22E-56 | -1.69E-46 |
| MS.gene053417 | MS.gene068197 | 0.83479 | 2.44E-56 | -1.69E-46 |
| MS.gene05369 | MS.gene068197 | 0.805888 | 1.07E-49 | -1.69E-46 |
| MS.gene054551 | MS.gene068197 | 0.87666 | 1.17E-68 | -1.69E-46 |
| MS.gene054552 | MS.gene068197 | 0.820555 | 6.45E-53 | -1.69E-46 |
| MS.gene054593 | MS.gene068197 | 0.874095 | 8.82E-68 | -1.69E-46 |
| MS.gene054633 | MS.gene068197 | 0.807907 | 4.02E-50 | -1.69E-46 |
| MS.gene054662 | MS.gene068197 | 0.804247 | 2.37E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene068197 | 0.874084 | 8.90E-68 | -1.69E-46 |
| MS.gene055578 | MS.gene068197 | 0.861827 | 7.80E-64 | -1.69E-46 |
| MS.gene055957 | MS.gene068197 | 0.846992 | 1.53E-59 | -1.69E-46 |
| MS.gene056041 | MS.gene068197 | 0.894054 | 3.53E-75 | -1.69E-46 |
| MS.gene05640 | MS.gene068197 | 0.875669 | 2.57E-68 | -1.69E-46 |
| MS.gene056526 | MS.gene068197 | 0.820847 | 5.52E-53 | -1.69E-46 |
| MS.gene056528 | MS.gene068197 | 0.827463 | 1.54E-54 | -1.69E-46 |
| MS.gene05652 | MS.gene068197 | 0.805688 | 1.18E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene068197 | 0.810095 | 1.37E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene068197 | 0.844615 | 6.77E-59 | -1.69E-46 |
| MS.gene058013 | MS.gene068197 | 0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene068197 | 0.841843 | 3.72E-58 | -1.69E-46 |
| MS.gene058853 | MS.gene068197 | 0.863736 | 2.01E-64 | -1.69E-46 |
| MS.gene059553 | MS.gene068197 | 0.83317 | 6.22E-56 | -1.69E-46 |
| MS.gene059616 | MS.gene068197 | 0.827292 | 1.70E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene068197 | 0.85918 | 4.94E-63 | -1.69E-46 |
| MS.gene060565 | MS.gene068197 | 0.855693 | 5.31E-62 | -1.69E-46 |
| MS.gene06093 | MS.gene068197 | 0.856236 | 3.69E-62 | -1.69E-46 |
| MS.gene061099 | MS.gene068197 | 0.862483 | 4.91E-64 | -1.69E-46 |
| MS.gene061260 | MS.gene068197 | 0.877742 | 4.92E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene068197 | MS.gene034044 | PPI |
| MS.gene068197 | MS.gene034046 | PPI |
| MS.gene79484 | MS.gene068197 | PPI |
| MS.gene37310 | MS.gene068197 | PPI |
| MS.gene026793 | MS.gene068197 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068197.t1 | MTR_1g050472 | 99.394 | 330 | 2 | 0 | 1 | 330 | 1 | 330 | 0.0 | 678 |
| MS.gene068197.t1 | MTR_0268s0080 | 96.970 | 330 | 10 | 0 | 1 | 330 | 1 | 330 | 0.0 | 667 |
| MS.gene068197.t1 | MTR_7g029110 | 96.061 | 330 | 13 | 0 | 1 | 330 | 1 | 330 | 0.0 | 641 |
| MS.gene068197.t1 | MTR_8g469010 | 92.727 | 330 | 19 | 1 | 1 | 330 | 1 | 325 | 0.0 | 634 |
| MS.gene068197.t1 | MTR_4g117370 | 76.308 | 325 | 76 | 1 | 6 | 330 | 18 | 341 | 0.0 | 532 |
| MS.gene068197.t1 | MTR_6g005270 | 67.442 | 43 | 14 | 0 | 265 | 307 | 25 | 67 | 1.63e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068197.t1 | AT3G27060 | 83.735 | 332 | 52 | 2 | 1 | 330 | 1 | 332 | 0.0 | 558 |
| MS.gene068197.t1 | AT3G23580 | 76.308 | 325 | 76 | 1 | 6 | 330 | 18 | 341 | 0.0 | 518 |
Find 63 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGAATCGGTCTGGGTTT+GGG | 0.237047 | 1.4:-36600933 | None:intergenic |
| TGCGCATTGGTTGGGATGAA+TGG | 0.293239 | 1.4:+36601636 | MS.gene068197:CDS |
| CGCTTCCTTGCGCATTGGTT+GGG | 0.302060 | 1.4:+36601628 | MS.gene068197:CDS |
| GTTTGTTGCTGATAGGTTAT+TGG | 0.303774 | 1.4:+36601683 | MS.gene068197:CDS |
| AGTGGCGTTCGCCGTCTGTT+AGG | 0.311051 | 1.4:-36601065 | None:intergenic |
| GGGGCAAGAAGGGGTTCTTC+TGG | 0.330658 | 1.4:-36600913 | None:intergenic |
| ATGCAGAATCGGTCTGGGTT+TGG | 0.338926 | 1.4:-36600934 | None:intergenic |
| GCGCATTGGTTGGGATGAAT+GGG | 0.350139 | 1.4:+36601637 | MS.gene068197:CDS |
| AAGCTGATTGGGCGATGAAA+TGG | 0.358474 | 1.4:+36601328 | MS.gene068197:CDS |
| ACAATTTCTTTCACGCGCTC+TGG | 0.374811 | 1.4:-36601564 | None:intergenic |
| TTTGTTGCTGATAGGTTATT+GGG | 0.379609 | 1.4:+36601684 | MS.gene068197:CDS |
| AATCGCTTATATACGTTTCA+AGG | 0.387103 | 1.4:-36601248 | None:intergenic |
| ATGTTCAGAATCCGTTTGAT+TGG | 0.390491 | 1.4:+36601733 | MS.gene068197:CDS |
| ACCGTAGAAGGCACGTGCTT+CGG | 0.402800 | 1.4:-36601178 | None:intergenic |
| GTCTGGGTTTGGGGCAAGAA+GGG | 0.415976 | 1.4:-36600923 | None:intergenic |
| GGGAACATGCAGAATCGGTC+TGG | 0.418807 | 1.4:-36600940 | None:intergenic |
| GCGCTTCCTTGCGCATTGGT+TGG | 0.429604 | 1.4:+36601627 | MS.gene068197:CDS |
| GATTTCTTTCATGAATCTAC+CGG | 0.435670 | 1.4:-36601148 | None:intergenic |
| GTTGCATTTGCTTGTGTTGA+AGG | 0.436600 | 1.4:+36601384 | MS.gene068197:CDS |
| TCAGAATCCGTTTGATTGGA+TGG | 0.443597 | 1.4:+36601737 | MS.gene068197:CDS |
| TCTGGGTTTGGGGCAAGAAG+GGG | 0.444554 | 1.4:-36600922 | None:intergenic |
| AGGCACGTGCTTCGGAGACT+TGG | 0.444676 | 1.4:-36601170 | None:intergenic |
| GCCGTCGGAGGCGGCGAAGA+AGG | 0.452615 | 1.4:-36601106 | None:intergenic |
| CTGTTATGAATAGCTTGAAT+GGG | 0.453833 | 1.4:+36601826 | MS.gene068197:CDS |
| TCTGTTATGAATAGCTTGAA+TGG | 0.458759 | 1.4:+36601825 | MS.gene068197:CDS |
| GAAAATCGCACAGAAACTTC+CGG | 0.473049 | 1.4:-36601418 | None:intergenic |
| GAGGACGATGCCGTCGGAGG+CGG | 0.474359 | 1.4:-36601115 | None:intergenic |
| TGCAATCTGGAAACCGTAGA+AGG | 0.475411 | 1.4:-36601190 | None:intergenic |
| GGCGGTCCAGAATGAGGCTT+CGG | 0.476778 | 1.4:-36601001 | None:intergenic |
| ATGGAATTGATTTCGCTTCA+AGG | 0.479094 | 1.4:+36601756 | MS.gene068197:CDS |
| ATCAATTCCATCCAATCAAA+CGG | 0.480364 | 1.4:-36601744 | None:intergenic |
| CGACGCGCTTCCTTGCGCAT+TGG | 0.483293 | 1.4:+36601623 | MS.gene068197:CDS |
| GAGCTTATTTCACGTGATGA+AGG | 0.484978 | 1.4:+36601486 | MS.gene068197:CDS |
| TCCGAAGCACGTGCCTTCTA+CGG | 0.485174 | 1.4:+36601177 | MS.gene068197:CDS |
| GATAGGTTATTGGGTGAGCT+TGG | 0.486660 | 1.4:+36601693 | MS.gene068197:CDS |
| GGAACATGCAGAATCGGTCT+GGG | 0.489835 | 1.4:-36600939 | None:intergenic |
| CGCATTGGTTGGGATGAATG+GGG | 0.491773 | 1.4:+36601638 | MS.gene068197:CDS |
| ATATTGAGTTTGTTGCTGAT+AGG | 0.493329 | 1.4:+36601676 | MS.gene068197:CDS |
| GGAGGAAAGATCGACTTCTT+CGG | 0.499480 | 1.4:-36601022 | None:intergenic |
| GTGATGCTGTTGAAATTGAA+AGG | 0.499878 | 1.4:+36601589 | MS.gene068197:CDS |
| AGGGGTTCTTCTGGAAAAGC+AGG | 0.505225 | 1.4:-36600904 | None:intergenic |
| GGGTGAGCTTGGTTGTGAAA+AGG | 0.505349 | 1.4:+36601704 | MS.gene068197:CDS |
| GCCTTCTTCGCCGCCTCCGA+CGG | 0.505987 | 1.4:+36601105 | MS.gene068197:CDS |
| GGTCTGGGTTTGGGGCAAGA+AGG | 0.509820 | 1.4:-36600924 | None:intergenic |
| TGGAATTGATTTCGCTTCAA+GGG | 0.520571 | 1.4:+36601757 | MS.gene068197:CDS |
| GGATTGGGAACATGCAGAAT+CGG | 0.521690 | 1.4:-36600945 | None:intergenic |
| TTCTTCGGCGGTCCAGAATG+AGG | 0.524296 | 1.4:-36601007 | None:intergenic |
| GCAGAATCGGTCTGGGTTTG+GGG | 0.524980 | 1.4:-36600932 | None:intergenic |
| TGAAATAAGCTCGTTTGAGA+AGG | 0.538441 | 1.4:-36601475 | None:intergenic |
| TGATGCTGTTGAAATTGAAA+GGG | 0.545948 | 1.4:+36601590 | MS.gene068197:CDS |
| TTTCCTCCGATCTCAAGCAC+TGG | 0.566756 | 1.4:+36601037 | MS.gene068197:CDS |
| TTCGAGGACGATGCCGTCGG+AGG | 0.583990 | 1.4:-36601118 | None:intergenic |
| CGAGGACGTGAGAGATGAAG+TGG | 0.584744 | 1.4:-36601083 | None:intergenic |
| TCGTTTGAGAAGGTTAATCC+CGG | 0.587906 | 1.4:-36601465 | None:intergenic |
| CGGAGGCGGCGAAGAAGGCG+AGG | 0.590500 | 1.4:-36601101 | None:intergenic |
| GCATTGGTTGGGATGAATGG+GGG | 0.596821 | 1.4:+36601639 | MS.gene068197:CDS |
| ATGAATAGCTTGAATGGGAA+TGG | 0.603815 | 1.4:+36601831 | MS.gene068197:CDS |
| TTCATCCCAACCAATGCGCA+AGG | 0.604485 | 1.4:-36601633 | None:intergenic |
| CACTGGCAAAACCTAACAGA+CGG | 0.606745 | 1.4:+36601054 | MS.gene068197:CDS |
| TTGCCAGTGCTTGAGATCGG+AGG | 0.610798 | 1.4:-36601040 | None:intergenic |
| ATCGTCCTCGAAAATCTCGC+CGG | 0.639774 | 1.4:+36601129 | MS.gene068197:CDS |
| GGAAAGATCGACTTCTTCGG+CGG | 0.687608 | 1.4:-36601019 | None:intergenic |
| GAAGAGAGTACATCTCAGAG+TGG | 0.694344 | 1.4:-36601224 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATCCAATACCCAAAAATCT+GGG | + | chr1.4:36600963-36600982 | MS.gene068197:CDS | 30.0% | |
| AATCGCTTATATACGTTTCA+AGG | - | chr1.4:36601251-36601270 | None:intergenic | 30.0% | |
| ATCAATTCCATCCAATCAAA+CGG | - | chr1.4:36601747-36601766 | None:intergenic | 30.0% | |
| CTGTTATGAATAGCTTGAAT+GGG | + | chr1.4:36601826-36601845 | MS.gene068197:CDS | 30.0% | |
| GATTTCTTTCATGAATCTAC+CGG | - | chr1.4:36601151-36601170 | None:intergenic | 30.0% | |
| TCTGTTATGAATAGCTTGAA+TGG | + | chr1.4:36601825-36601844 | MS.gene068197:CDS | 30.0% | |
| TGATGCTGTTGAAATTGAAA+GGG | + | chr1.4:36601590-36601609 | MS.gene068197:CDS | 30.0% | |
| TTTGTTGCTGATAGGTTATT+GGG | + | chr1.4:36601684-36601703 | MS.gene068197:CDS | 30.0% | |
| ! | TGTACATTTCCCAGATTTTT+GGG | - | chr1.4:36600975-36600994 | None:intergenic | 30.0% |
| ! | TTGTACATTTCCCAGATTTT+TGG | - | chr1.4:36600976-36600995 | None:intergenic | 30.0% |
| !! | ATATTGAGTTTGTTGCTGAT+AGG | + | chr1.4:36601676-36601695 | MS.gene068197:CDS | 30.0% |
| !!! | AGATTTTTGGGTATTGGATT+GGG | - | chr1.4:36600963-36600982 | None:intergenic | 30.0% |
| !!! | ATTTTCTGGTTGAAAAAACG+TGG | + | chr1.4:36601435-36601454 | MS.gene068197:CDS | 30.0% |
| AAAAAACGTGGTTTAATGCC+GGG | + | chr1.4:36601447-36601466 | MS.gene068197:CDS | 35.0% | |
| AACGCGCTTCTCAAAAAAAT+TGG | - | chr1.4:36601787-36601806 | None:intergenic | 35.0% | |
| ATGAATAGCTTGAATGGGAA+TGG | + | chr1.4:36601831-36601850 | MS.gene068197:CDS | 35.0% | |
| ATGTTCAGAATCCGTTTGAT+TGG | + | chr1.4:36601733-36601752 | MS.gene068197:CDS | 35.0% | |
| CAATCCAATACCCAAAAATC+TGG | + | chr1.4:36600962-36600981 | MS.gene068197:CDS | 35.0% | |
| GAAAAAACGTGGTTTAATGC+CGG | + | chr1.4:36601446-36601465 | MS.gene068197:CDS | 35.0% | |
| GTGATGCTGTTGAAATTGAA+AGG | + | chr1.4:36601589-36601608 | MS.gene068197:CDS | 35.0% | |
| TATCGCGAAAAAAGCTGATT+GGG | + | chr1.4:36601317-36601336 | MS.gene068197:CDS | 35.0% | |
| TGAAATAAGCTCGTTTGAGA+AGG | - | chr1.4:36601478-36601497 | None:intergenic | 35.0% | |
| ! | ATGGAATTGATTTCGCTTCA+AGG | + | chr1.4:36601756-36601775 | MS.gene068197:CDS | 35.0% |
| ! | GTTGAAGGAATCTTTTTCTC+CGG | + | chr1.4:36601399-36601418 | MS.gene068197:CDS | 35.0% |
| ! | GTTTGTTGCTGATAGGTTAT+TGG | + | chr1.4:36601683-36601702 | MS.gene068197:CDS | 35.0% |
| ! | TGGAATTGATTTCGCTTCAA+GGG | + | chr1.4:36601757-36601776 | MS.gene068197:CDS | 35.0% |
| !!! | AATTTTTTTGAGAAGCGCGT+TGG | + | chr1.4:36601786-36601805 | MS.gene068197:CDS | 35.0% |
| !!! | ATTTTTTTGAGAAGCGCGTT+GGG | + | chr1.4:36601787-36601806 | MS.gene068197:CDS | 35.0% |
| !!! | CAGATTTTTGGGTATTGGAT+TGG | - | chr1.4:36600964-36600983 | None:intergenic | 35.0% |
| !!! | TGCTGATTTTTGCTTCAAGT+TGG | + | chr1.4:36601857-36601876 | MS.gene068197:CDS | 35.0% |
| !!! | TTTCCCAGATTTTTGGGTAT+TGG | - | chr1.4:36600969-36600988 | None:intergenic | 35.0% |
| GAAAATCGCACAGAAACTTC+CGG | - | chr1.4:36601421-36601440 | None:intergenic | 40.0% | |
| GAGCTTATTTCACGTGATGA+AGG | + | chr1.4:36601486-36601505 | MS.gene068197:CDS | 40.0% | |
| GTATCGCGAAAAAAGCTGAT+TGG | + | chr1.4:36601316-36601335 | MS.gene068197:CDS | 40.0% | |
| GTTGCATTTGCTTGTGTTGA+AGG | + | chr1.4:36601384-36601403 | MS.gene068197:CDS | 40.0% | |
| TCAGAATCCGTTTGATTGGA+TGG | + | chr1.4:36601737-36601756 | MS.gene068197:CDS | 40.0% | |
| TCGTTTGAGAAGGTTAATCC+CGG | - | chr1.4:36601468-36601487 | None:intergenic | 40.0% | |
| ! | GAAGTTTCTGTGCGATTTTC+TGG | + | chr1.4:36601421-36601440 | MS.gene068197:CDS | 40.0% |
| ! | GGATGTTTTCGATTGCAATC+TGG | - | chr1.4:36601206-36601225 | None:intergenic | 40.0% |
| !!! | TCAGCTTTTTTCGCGATACA+TGG | - | chr1.4:36601315-36601334 | None:intergenic | 40.0% |
| !!! | TTTTTTTGAGAAGCGCGTTG+GGG | + | chr1.4:36601788-36601807 | MS.gene068197:CDS | 40.0% |
| AAAAAGCCGAAGCCTCATTC+TGG | + | chr1.4:36600995-36601014 | MS.gene068197:CDS | 45.0% | |
| AAGCTGATTGGGCGATGAAA+TGG | + | chr1.4:36601328-36601347 | MS.gene068197:CDS | 45.0% | |
| ACAATTTCTTTCACGCGCTC+TGG | - | chr1.4:36601567-36601586 | None:intergenic | 45.0% | |
| CACTGGCAAAACCTAACAGA+CGG | + | chr1.4:36601054-36601073 | MS.gene068197:CDS | 45.0% | |
| GATAGGTTATTGGGTGAGCT+TGG | + | chr1.4:36601693-36601712 | MS.gene068197:CDS | 45.0% | |
| GGATTGGGAACATGCAGAAT+CGG | - | chr1.4:36600948-36600967 | None:intergenic | 45.0% | |
| TGCAATCTGGAAACCGTAGA+AGG | - | chr1.4:36601193-36601212 | None:intergenic | 45.0% | |
| ! | GAAGAGAGTACATCTCAGAG+TGG | - | chr1.4:36601227-36601246 | None:intergenic | 45.0% |
| ! | GGAGGAAAGATCGACTTCTT+CGG | - | chr1.4:36601025-36601044 | None:intergenic | 45.0% |
| ! | GTTTTGCCAGTGCTTGAGAT+CGG | - | chr1.4:36601046-36601065 | None:intergenic | 45.0% |
| ATCGTCCTCGAAAATCTCGC+CGG | + | chr1.4:36601129-36601148 | MS.gene068197:CDS | 50.0% | |
| ATGCAGAATCGGTCTGGGTT+TGG | - | chr1.4:36600937-36600956 | None:intergenic | 50.0% | |
| GGAACATGCAGAATCGGTCT+GGG | - | chr1.4:36600942-36600961 | None:intergenic | 50.0% | |
| GGGTGAGCTTGGTTGTGAAA+AGG | + | chr1.4:36601704-36601723 | MS.gene068197:CDS | 50.0% | |
| TGCAGAATCGGTCTGGGTTT+GGG | - | chr1.4:36600936-36600955 | None:intergenic | 50.0% | |
| TTCATCCCAACCAATGCGCA+AGG | - | chr1.4:36601636-36601655 | None:intergenic | 50.0% | |
| TTTCCTCCGATCTCAAGCAC+TGG | + | chr1.4:36601037-36601056 | MS.gene068197:CDS | 50.0% | |
| ! | AGGGGTTCTTCTGGAAAAGC+AGG | - | chr1.4:36600907-36600926 | None:intergenic | 50.0% |
| ! | ATCTACCGGCGAGATTTTCG+AGG | - | chr1.4:36601137-36601156 | None:intergenic | 50.0% |
| ! | GGAAAGATCGACTTCTTCGG+CGG | - | chr1.4:36601022-36601041 | None:intergenic | 50.0% |
| !! | ATTTTCGAGGACGATGCCGT+CGG | - | chr1.4:36601124-36601143 | None:intergenic | 50.0% |
| !! | CGCATTGGTTGGGATGAATG+GGG | + | chr1.4:36601638-36601657 | MS.gene068197:CDS | 50.0% |
| !! | GCATTGGTTGGGATGAATGG+GGG | + | chr1.4:36601639-36601658 | MS.gene068197:CDS | 50.0% |
| !! | GCGCATTGGTTGGGATGAAT+GGG | + | chr1.4:36601637-36601656 | MS.gene068197:CDS | 50.0% |
| !! | TGCGCATTGGTTGGGATGAA+TGG | + | chr1.4:36601636-36601655 | MS.gene068197:CDS | 50.0% |
| CGAGGACGTGAGAGATGAAG+TGG | - | chr1.4:36601086-36601105 | None:intergenic | 55.0% | |
| GCAGAATCGGTCTGGGTTTG+GGG | - | chr1.4:36600935-36600954 | None:intergenic | 55.0% | |
| GGGAACATGCAGAATCGGTC+TGG | - | chr1.4:36600943-36600962 | None:intergenic | 55.0% | |
| TCCGAAGCACGTGCCTTCTA+CGG | + | chr1.4:36601177-36601196 | MS.gene068197:CDS | 55.0% | |
| TTCTTCGGCGGTCCAGAATG+AGG | - | chr1.4:36601010-36601029 | None:intergenic | 55.0% | |
| TTGCCAGTGCTTGAGATCGG+AGG | - | chr1.4:36601043-36601062 | None:intergenic | 55.0% | |
| ! | ACCGTAGAAGGCACGTGCTT+CGG | - | chr1.4:36601181-36601200 | None:intergenic | 55.0% |
| ! | GTCTGGGTTTGGGGCAAGAA+GGG | - | chr1.4:36600926-36600945 | None:intergenic | 55.0% |
| ! | TCTGGGTTTGGGGCAAGAAG+GGG | - | chr1.4:36600925-36600944 | None:intergenic | 55.0% |
| !! | CGCTTCCTTGCGCATTGGTT+GGG | + | chr1.4:36601628-36601647 | MS.gene068197:CDS | 55.0% |
| AGGCACGTGCTTCGGAGACT+TGG | - | chr1.4:36601173-36601192 | None:intergenic | 60.0% | |
| AGTGGCGTTCGCCGTCTGTT+AGG | - | chr1.4:36601068-36601087 | None:intergenic | 60.0% | |
| GGCGGTCCAGAATGAGGCTT+CGG | - | chr1.4:36601004-36601023 | None:intergenic | 60.0% | |
| GGGGCAAGAAGGGGTTCTTC+TGG | - | chr1.4:36600916-36600935 | None:intergenic | 60.0% | |
| ! | GCGCTTCCTTGCGCATTGGT+TGG | + | chr1.4:36601627-36601646 | MS.gene068197:CDS | 60.0% |
| ! | GGTCTGGGTTTGGGGCAAGA+AGG | - | chr1.4:36600927-36600946 | None:intergenic | 60.0% |
| CGACGCGCTTCCTTGCGCAT+TGG | + | chr1.4:36601623-36601642 | MS.gene068197:CDS | 65.0% | |
| TTCGAGGACGATGCCGTCGG+AGG | - | chr1.4:36601121-36601140 | None:intergenic | 65.0% | |
| GAGGACGATGCCGTCGGAGG+CGG | - | chr1.4:36601118-36601137 | None:intergenic | 70.0% | |
| GCCTTCTTCGCCGCCTCCGA+CGG | + | chr1.4:36601105-36601124 | MS.gene068197:CDS | 70.0% | |
| CGGAGGCGGCGAAGAAGGCG+AGG | - | chr1.4:36601104-36601123 | None:intergenic | 75.0% | |
| GCCGTCGGAGGCGGCGAAGA+AGG | - | chr1.4:36601109-36601128 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 36600901 | 36601893 | 36600901 | ID=MS.gene068197 |
| chr1.4 | mRNA | 36600901 | 36601893 | 36600901 | ID=MS.gene068197.t1;Parent=MS.gene068197 |
| chr1.4 | exon | 36600901 | 36601893 | 36600901 | ID=MS.gene068197.t1.exon1;Parent=MS.gene068197.t1 |
| chr1.4 | CDS | 36600901 | 36601893 | 36600901 | ID=cds.MS.gene068197.t1;Parent=MS.gene068197.t1 |
| Gene Sequence |
| Protein sequence |
