AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069129


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069129.t1 MTR_5g031830 94.737 475 25 0 1 475 1 475 0.0 901
MS.gene069129.t1 MTR_5g031860 85.684 475 67 1 1 475 1 474 0.0 831
MS.gene069129.t1 MTR_5g031840 77.944 467 99 2 10 475 3 466 0.0 768
MS.gene069129.t1 MTR_5g464760 37.705 488 277 13 1 470 1 479 1.18e-95 297
MS.gene069129.t1 MTR_6g013960 35.318 487 272 11 11 470 9 479 1.21e-95 297
MS.gene069129.t1 MTR_0036s0220 37.917 480 271 12 8 470 8 477 3.94e-95 296
MS.gene069129.t1 MTR_5g464810 38.285 478 272 11 8 470 8 477 8.97e-95 295
MS.gene069129.t1 MTR_5g064240 38.285 478 272 11 8 470 8 477 8.97e-95 295
MS.gene069129.t1 MTR_2g008210 37.131 474 277 10 11 470 10 476 1.63e-91 286
MS.gene069129.t1 MTR_7g011470 36.820 478 263 13 11 470 9 465 1.67e-91 286
MS.gene069129.t1 MTR_6g014020 34.623 491 276 12 8 470 6 479 1.84e-91 286
MS.gene069129.t1 MTR_6g013920 35.787 489 272 10 8 470 6 478 3.40e-91 286
MS.gene069129.t1 MTR_4g094220 35.102 490 281 11 7 471 2 479 3.45e-91 286
MS.gene069129.t1 MTR_6g013900 34.969 489 276 11 8 470 6 478 3.70e-91 286
MS.gene069129.t1 MTR_6g014187 33.063 493 283 12 7 470 5 479 4.11e-91 286
MS.gene069129.t1 MTR_6g014200 35.992 489 270 11 9 470 4 476 5.08e-91 285
MS.gene069129.t1 MTR_5g058320 34.322 472 288 8 8 470 6 464 1.28e-90 284
MS.gene069129.t1 MTR_7g011470 36.192 478 262 12 11 470 9 461 2.45e-90 283
MS.gene069129.t1 MTR_6g014270 34.298 484 287 12 9 470 4 478 4.31e-90 283
MS.gene069129.t1 MTR_6g014040 35.234 491 286 13 1 470 1 480 2.22e-89 281
MS.gene069129.t1 MTR_6g013450 33.196 485 292 11 8 470 6 480 5.82e-89 280
MS.gene069129.t1 MTR_6g014220 34.656 479 284 11 11 470 9 477 6.01e-89 280
MS.gene069129.t1 MTR_8g059425 34.232 482 282 11 11 470 9 477 1.69e-88 279
MS.gene069129.t1 MTR_3g479520 35.537 484 279 12 8 470 11 482 2.99e-88 278
MS.gene069129.t1 MTR_3g479470 36.000 475 278 11 11 468 12 477 4.04e-88 278
MS.gene069129.t1 MTR_3g479490 35.477 482 274 13 12 470 6 473 2.91e-87 275
MS.gene069129.t1 MTR_6g011340 35.438 491 272 11 8 470 6 479 1.18e-86 274
MS.gene069129.t1 MTR_3g079480 34.350 492 280 12 3 468 12 486 1.73e-86 274
MS.gene069129.t1 MTR_6g014310 34.447 479 283 10 11 468 10 478 3.35e-86 273
MS.gene069129.t1 MTR_6g014150 35.041 488 272 12 11 470 6 476 1.25e-85 271
MS.gene069129.t1 MTR_6g013440 32.165 485 298 10 7 470 6 480 1.45e-85 271
MS.gene069129.t1 MTR_3g008010 34.029 479 287 12 9 468 7 475 7.46e-85 269
MS.gene069129.t1 MTR_0288s0020 32.917 480 274 10 11 470 9 460 3.80e-84 267
MS.gene069129.t1 MTR_6g014050 34.568 486 285 12 7 470 6 480 3.06e-83 265
MS.gene069129.t1 MTR_6g014250 32.919 483 285 11 12 470 10 477 2.14e-82 263
MS.gene069129.t1 MTR_6g014300 32.394 497 277 13 1 470 1 465 2.41e-81 260
MS.gene069129.t1 MTR_6g014290 32.427 478 296 11 11 470 9 477 5.66e-81 259
MS.gene069129.t1 MTR_6g013990 33.401 491 282 11 7 470 5 477 6.79e-81 259
MS.gene069129.t1 MTR_3g069690 33.747 483 275 13 6 474 2 453 2.03e-72 236
MS.gene069129.t1 MTR_6g014240 31.983 469 280 12 12 470 7 446 2.05e-72 236
MS.gene069129.t1 MTR_6g014170 32.636 478 279 12 11 470 9 461 2.97e-72 236
MS.gene069129.t1 MTR_3g069710 32.640 481 287 13 1 472 1 453 6.80e-72 235
MS.gene069129.t1 MTR_4g064987 32.515 489 275 15 1 472 1 451 1.27e-66 221
MS.gene069129.t1 MTR_6g014190 37.413 286 174 3 187 470 4 286 2.87e-66 215
MS.gene069129.t1 MTR_4g064987 32.311 489 270 16 1 472 1 445 1.34e-64 215
MS.gene069129.t1 MTR_8g088560 33.196 485 283 15 4 473 2 460 1.79e-64 215
MS.gene069129.t1 MTR_0477s0010 33.908 348 182 6 132 470 8 316 2.46e-64 211
MS.gene069129.t1 MTR_0891s0010 38.194 288 168 5 187 468 4 287 2.45e-62 205
MS.gene069129.t1 MTR_3g479610 36.364 308 185 6 169 470 10 312 2.70e-62 206
MS.gene069129.t1 MTR_6g014186 29.303 488 262 14 11 470 6 438 1.53e-60 204
MS.gene069129.t1 MTR_6g038230 31.967 488 274 16 1 467 1 451 1.51e-59 202
MS.gene069129.t1 MTR_7g080940 30.309 485 274 16 12 474 11 453 7.49e-59 201
MS.gene069129.t1 MTR_7g080935 30.928 485 271 16 12 474 11 453 2.23e-58 199
MS.gene069129.t1 MTR_5g035580 31.557 488 264 17 12 473 13 456 2.98e-57 196
MS.gene069129.t1 MTR_5g035560 31.762 488 263 18 12 473 11 454 5.20e-57 197
MS.gene069129.t1 MTR_8g066610 31.288 489 299 18 8 472 4 479 1.28e-56 195
MS.gene069129.t1 MTR_8g043470 31.477 413 230 11 69 470 7 377 2.36e-56 192
MS.gene069129.t1 MTR_7g013240 30.638 470 279 11 11 469 5 438 8.88e-56 192
MS.gene069129.t1 MTR_7g080950 29.350 477 278 15 12 467 6 444 3.22e-55 191
MS.gene069129.t1 MTR_7g013260 31.579 475 269 15 11 469 5 439 8.38e-55 189
MS.gene069129.t1 MTR_6g038200 31.447 477 270 15 12 467 11 451 1.21e-54 189
MS.gene069129.t1 MTR_6g038300 29.769 477 300 14 1 467 1 452 2.75e-54 188
MS.gene069129.t1 MTR_3g084520 30.928 485 291 13 12 470 6 472 8.61e-54 187
MS.gene069129.t1 MTR_6g038240 30.083 482 291 16 1 467 1 451 9.10e-54 187
MS.gene069129.t1 MTR_5g016480 28.513 491 293 15 8 467 4 467 6.35e-53 185
MS.gene069129.t1 MTR_1g107380 31.967 488 281 21 12 473 13 475 1.15e-52 185
MS.gene069129.t1 MTR_8g007585 35.385 325 180 10 166 470 77 391 7.47e-52 180
MS.gene069129.t1 MTR_7g013200 29.237 472 284 14 11 469 4 438 1.29e-51 181
MS.gene069129.t1 MTR_1g107315 29.814 483 305 13 8 472 4 470 1.54e-51 182
MS.gene069129.t1 MTR_6g038220 30.204 490 279 19 1 467 1 450 1.97e-51 181
MS.gene069129.t1 MTR_6g014160 28.369 423 207 10 72 470 42 392 6.24e-51 178
MS.gene069129.t1 MTR_5g070090 31.622 487 272 21 14 473 12 464 7.89e-51 179
MS.gene069129.t1 MTR_8g064870 28.747 487 307 12 8 472 7 475 8.92e-51 180
MS.gene069129.t1 MTR_8g083290 28.343 501 279 17 11 470 2 463 1.02e-50 179
MS.gene069129.t1 MTR_7g013220 28.898 481 289 12 11 471 4 451 3.53e-50 177
MS.gene069129.t1 MTR_8g027885 29.341 501 295 18 3 475 9 478 3.64e-50 178
MS.gene069129.t1 MTR_1g107365 29.098 488 292 13 5 471 38 492 9.62e-50 177
MS.gene069129.t1 MTR_6g013680 30.939 362 188 9 115 470 69 374 2.04e-49 173
MS.gene069129.t1 MTR_4g485630 28.858 499 285 17 12 472 9 475 3.29e-49 175
MS.gene069129.t1 MTR_1g107375 28.067 481 299 11 8 471 4 454 6.96e-49 174
MS.gene069129.t1 MTR_7g080900 28.131 487 302 16 1 472 1 454 1.04e-48 174
MS.gene069129.t1 MTR_1g062380 29.920 498 296 18 9 470 13 493 1.36e-48 174
MS.gene069129.t1 MTR_1g032490 28.958 480 303 14 12 471 10 471 1.51e-48 174
MS.gene069129.t1 MTR_1g107350 29.752 484 294 16 12 471 8 469 1.90e-48 173
MS.gene069129.t1 MTR_3g084530 30.567 494 281 14 12 470 6 472 3.79e-48 172
MS.gene069129.t1 MTR_7g102560 31.810 525 261 25 1 470 1 483 3.83e-48 172
MS.gene069129.t1 MTR_1g107360 27.835 485 306 13 5 470 2 461 5.77e-48 172
MS.gene069129.t1 MTR_3g049970 28.542 480 307 13 12 472 9 471 1.43e-47 171
MS.gene069129.t1 MTR_3g084540 29.461 482 303 10 12 470 6 473 3.61e-47 170
MS.gene069129.t1 MTR_8g083280 29.424 486 283 15 13 470 8 461 4.48e-47 169
MS.gene069129.t1 MTR_7g102450 28.747 487 295 14 11 470 10 471 7.72e-47 169
MS.gene069129.t1 MTR_8g027870 29.563 504 290 22 3 475 9 478 1.03e-46 169
MS.gene069129.t1 MTR_4g095008 28.364 483 301 16 5 467 4 461 1.07e-46 170
MS.gene069129.t1 MTR_4g485620 33.850 387 218 16 106 472 88 456 1.18e-46 168
MS.gene069129.t1 MTR_4g094920 29.046 482 299 16 5 467 19 476 2.84e-46 168
MS.gene069129.t1 MTR_7g013180 28.059 474 287 14 9 463 2 440 1.80e-45 164
MS.gene069129.t1 MTR_5g016660 27.944 501 316 18 1 472 1 485 4.44e-45 164
MS.gene069129.t1 MTR_8g064880 28.256 453 284 13 12 440 9 444 1.21e-44 163
MS.gene069129.t1 MTR_5g045970 30.368 517 278 22 9 475 13 497 2.04e-44 163
MS.gene069129.t1 MTR_7g070660 28.235 510 299 19 1 472 1 481 4.87e-44 162
MS.gene069129.t1 MTR_6g033725 27.557 479 281 17 13 459 5 449 6.34e-44 161
MS.gene069129.t1 MTR_7g102520 30.572 507 302 17 1 473 1 491 1.66e-43 160
MS.gene069129.t1 MTR_7g070610 27.006 511 311 17 1 472 1 488 2.09e-43 160
MS.gene069129.t1 MTR_7g117170 28.657 499 295 19 1 466 1 471 2.39e-43 159
MS.gene069129.t1 MTR_5g072860 27.178 482 294 13 12 470 18 465 7.26e-43 158
MS.gene069129.t1 MTR_7g071040 28.346 508 312 18 1 472 1 492 1.29e-42 158
MS.gene069129.t1 MTR_5g070040 31.470 483 271 23 14 467 12 463 1.34e-42 157
MS.gene069129.t1 MTR_6g014185 35.521 259 132 7 218 474 123 348 1.60e-42 154
MS.gene069129.t1 MTR_6g033675 28.008 482 278 18 13 459 5 452 2.83e-42 157
MS.gene069129.t1 MTR_5g090700 27.713 516 278 22 13 474 6 480 3.32e-42 156
MS.gene069129.t1 MTR_8g090095 28.247 485 282 16 17 470 30 479 4.61e-42 156
MS.gene069129.t1 MTR_6g033625 25.667 487 302 13 13 468 5 462 6.35e-42 155
MS.gene069129.t1 MTR_7g117405 26.962 497 299 16 11 470 11 480 8.13e-42 155
MS.gene069129.t1 MTR_4g024020 28.457 499 297 17 12 470 9 487 4.56e-41 154
MS.gene069129.t1 MTR_7g102490 28.112 498 299 20 12 470 9 486 8.53e-41 153
MS.gene069129.t1 MTR_3g009510 26.747 501 290 16 13 468 6 474 1.29e-40 152
MS.gene069129.t1 MTR_7g102550 28.313 498 307 15 5 468 2 483 1.41e-40 152
MS.gene069129.t1 MTR_1g029540 28.094 509 269 19 4 470 6 459 1.56e-40 151
MS.gene069129.t1 MTR_5g098960 25.952 420 289 8 11 427 6 406 1.70e-40 151
MS.gene069129.t1 MTR_5g098930 27.291 502 281 18 13 470 6 467 2.25e-40 151
MS.gene069129.t1 MTR_1g107285 26.569 478 310 12 13 471 9 464 5.81e-40 150
MS.gene069129.t1 MTR_5g072810 28.195 493 273 20 12 472 12 455 6.94e-40 149
MS.gene069129.t1 MTR_7g070940 27.961 515 287 20 1 472 1 474 8.55e-40 150
MS.gene069129.t1 MTR_5g090600 26.453 499 285 17 12 474 5 457 8.71e-40 149
MS.gene069129.t1 MTR_5g072830 27.917 480 288 12 12 472 10 450 3.33e-39 147
MS.gene069129.t1 MTR_8g006710 29.839 372 221 11 123 472 114 467 4.28e-39 147
MS.gene069129.t1 MTR_7g070810 26.719 509 304 18 1 472 1 477 7.80e-39 147
MS.gene069129.t1 MTR_2g059240 27.347 490 303 18 6 470 7 468 1.61e-38 146
MS.gene069129.t1 MTR_5g090670 32.121 330 159 13 180 470 173 476 1.76e-38 146
MS.gene069129.t1 MTR_4g108250 26.602 515 288 16 12 472 11 489 1.89e-38 146
MS.gene069129.t1 MTR_8g006260 28.629 496 277 21 12 466 6 465 1.99e-38 146
MS.gene069129.t1 MTR_5g075440 26.639 488 281 19 12 467 10 452 2.55e-38 145
MS.gene069129.t1 MTR_7g070800 27.183 504 300 17 8 472 2 477 2.65e-38 145
MS.gene069129.t1 MTR_7g055710 26.839 503 309 17 1 467 1 480 2.67e-38 146
MS.gene069129.t1 MTR_8g071070 28.310 491 299 14 9 471 4 469 4.01e-38 145
MS.gene069129.t1 MTR_7g070740 26.969 508 312 18 1 472 1 485 4.75e-38 145
MS.gene069129.t1 MTR_7g102460 26.640 503 312 19 5 470 2 484 6.22e-38 145
MS.gene069129.t1 MTR_6g023665 27.386 482 294 18 13 466 14 467 6.71e-38 144
MS.gene069129.t1 MTR_5g072840 28.931 477 287 13 12 472 10 450 6.83e-38 144
MS.gene069129.t1 MTR_0184s0030 33.922 283 148 9 191 447 182 451 8.19e-38 144
MS.gene069129.t1 MTR_8g006730 29.620 368 217 12 122 466 114 462 9.95e-38 144
MS.gene069129.t1 MTR_5g090630 25.651 499 293 15 12 470 5 465 1.05e-37 144
MS.gene069129.t1 MTR_8g077590 29.948 384 204 15 115 466 112 462 1.30e-37 144
MS.gene069129.t1 MTR_6g035295 27.432 514 303 18 1 472 1 486 1.73e-37 144
MS.gene069129.t1 MTR_6g033615 25.157 477 303 13 13 468 5 448 2.22e-37 142
MS.gene069129.t1 MTR_3g031450 27.510 498 286 17 1 470 1 451 2.46e-37 143
MS.gene069129.t1 MTR_4g485590 29.009 424 239 13 5 412 2 379 2.54e-37 141
MS.gene069129.t1 MTR_3g031400 26.829 492 295 15 1 470 1 449 2.83e-37 142
MS.gene069129.t1 MTR_8g009050 28.426 394 220 14 103 466 101 462 4.55e-37 142
MS.gene069129.t1 MTR_7g070910 26.627 507 316 17 1 472 1 486 4.95e-37 142
MS.gene069129.t1 MTR_6g488280 29.268 369 212 11 123 466 116 460 4.95e-37 142
MS.gene069129.t1 MTR_0428s0010 29.268 369 212 11 123 466 116 460 4.95e-37 142
MS.gene069129.t1 MTR_8g009055 30.925 346 195 12 137 459 131 455 5.02e-37 142
MS.gene069129.t1 MTR_7g070930 26.854 499 304 18 12 472 14 489 7.21e-37 142
MS.gene069129.t1 MTR_5g045960 27.000 500 301 15 12 470 9 485 7.40e-37 142
MS.gene069129.t1 MTR_4g031800 25.709 494 308 15 13 474 10 476 7.56e-37 142
MS.gene069129.t1 MTR_7g070860 26.946 501 293 17 7 472 2 464 7.67e-37 141
MS.gene069129.t1 MTR_2g046820 30.645 310 181 8 180 468 164 460 9.41e-37 141
MS.gene069129.t1 MTR_2g040530 29.841 315 177 7 180 468 166 462 1.32e-36 140
MS.gene069129.t1 MTR_6g033660 24.897 486 302 15 13 466 5 459 3.08e-36 140
MS.gene069129.t1 MTR_5g066390 42.038 157 87 3 317 470 59 214 3.75e-36 133
MS.gene069129.t1 MTR_5g072820 27.859 481 287 15 12 472 10 450 5.69e-36 139
MS.gene069129.t1 MTR_5g090580 25.394 508 298 16 13 474 6 478 6.03e-36 139
MS.gene069129.t1 MTR_5g040030 25.646 503 327 18 1 472 3 489 6.65e-36 139
MS.gene069129.t1 MTR_6g005600 25.458 491 274 17 1 447 1 443 9.82e-36 138
MS.gene069129.t1 MTR_4g485640 28.792 389 230 14 106 468 297 664 1.32e-35 140
MS.gene069129.t1 MTR_7g070780 26.923 494 309 16 12 472 11 485 1.37e-35 138
MS.gene069129.t1 MTR_4g082820 26.253 499 294 16 12 474 7 467 1.38e-35 138
MS.gene069129.t1 MTR_8g008990 28.831 385 226 15 101 459 95 457 2.17e-35 137
MS.gene069129.t1 MTR_5g090620 25.245 511 296 20 13 474 6 479 2.64e-35 137
MS.gene069129.t1 MTR_8g009063 26.923 494 301 20 12 474 13 477 3.06e-35 137
MS.gene069129.t1 MTR_4g117960 28.106 491 292 19 17 471 16 481 4.18e-35 137
MS.gene069129.t1 MTR_8g012650 33.333 279 147 8 214 466 202 467 4.86e-35 136
MS.gene069129.t1 MTR_4g118000 27.016 496 276 17 17 471 17 467 5.28e-35 136
MS.gene069129.t1 MTR_0009s0240 27.812 489 294 17 9 471 4 459 5.79e-35 136
MS.gene069129.t1 MTR_2g035040 28.325 406 236 12 97 471 6 387 5.80e-35 135
MS.gene069129.t1 MTR_0536s0020 25.294 510 306 17 1 471 7 480 6.23e-35 136
MS.gene069129.t1 MTR_6g035265 32.039 309 162 10 194 468 177 471 8.58e-35 136
MS.gene069129.t1 MTR_2g046750 27.551 392 232 14 103 468 98 463 9.29e-35 135
MS.gene069129.t1 MTR_4g008630 38.647 207 111 4 280 470 256 462 1.30e-34 135
MS.gene069129.t1 MTR_4g128720 24.632 475 312 16 12 472 15 457 1.42e-34 135
MS.gene069129.t1 MTR_8g006270 29.747 316 173 9 180 467 166 460 1.80e-34 135
MS.gene069129.t1 MTR_8g465670 26.008 496 290 17 13 467 8 467 1.80e-34 135
MS.gene069129.t1 MTR_2g034990 26.761 497 292 16 17 471 16 482 2.93e-34 134
MS.gene069129.t1 MTR_5g019580 30.750 400 207 18 105 463 101 471 3.41e-34 134
MS.gene069129.t1 MTR_6g013435 28.613 346 188 10 127 470 18 306 3.82e-34 130
MS.gene069129.t1 MTR_2086s0010 37.500 160 97 2 314 470 12 171 5.59e-34 126
MS.gene069129.t1 MTR_1996s0010 37.500 160 97 2 314 470 12 171 5.59e-34 126
MS.gene069129.t1 MTR_4g117980 27.092 502 284 18 17 471 16 482 6.47e-34 133
MS.gene069129.t1 MTR_8g044140 27.660 376 238 12 119 472 87 450 7.43e-34 133
MS.gene069129.t1 MTR_4g117950 31.488 289 150 9 216 471 190 463 1.73e-33 132
MS.gene069129.t1 MTR_5g087620 29.307 505 292 24 11 470 9 493 2.07e-33 132
MS.gene069129.t1 MTR_4g128690 26.685 371 233 11 111 472 114 454 4.46e-33 130
MS.gene069129.t1 MTR_1g019510 28.150 373 221 14 117 466 111 459 4.65e-33 130
MS.gene069129.t1 MTR_8g009073 35.865 237 112 8 206 415 52 275 6.27e-33 128
MS.gene069129.t1 MTR_8g012635 28.571 371 219 12 115 459 110 460 9.84e-33 130
MS.gene069129.t1 MTR_5g090610 26.962 497 286 19 12 471 5 461 1.18e-32 129
MS.gene069129.t1 MTR_8g009073 31.902 326 185 13 106 415 100 404 1.36e-32 129
MS.gene069129.t1 MTR_6g035185 26.990 515 269 19 17 471 16 483 1.81e-32 129
MS.gene069129.t1 MTR_8g012730 29.893 281 145 6 201 460 48 297 2.49e-32 125
MS.gene069129.t1 MTR_5g039900 25.247 507 321 18 1 472 2 485 2.51e-32 129
MS.gene069129.t1 MTR_5g090660 25.838 507 289 21 12 470 5 472 3.16e-32 129
MS.gene069129.t1 MTR_0184s0040 27.100 369 229 10 119 466 127 476 5.68e-32 128
MS.gene069129.t1 MTR_0078s0190 27.100 369 229 10 119 466 127 476 5.68e-32 128
MS.gene069129.t1 MTR_8g009067 30.820 305 173 10 128 415 3 286 7.08e-32 125
MS.gene069129.t1 MTR_5g019580 31.864 295 148 12 203 463 220 495 8.81e-32 128
MS.gene069129.t1 MTR_8g012630 37.129 202 105 6 280 459 203 404 9.07e-32 126
MS.gene069129.t1 MTR_8g012745 31.022 274 151 10 210 459 198 457 1.15e-31 127
MS.gene069129.t1 MTR_1g040310 35.211 213 121 5 277 472 273 485 1.29e-31 127
MS.gene069129.t1 MTR_5g004940 32.843 204 120 3 272 471 188 378 1.32e-31 125
MS.gene069129.t1 MTR_7g070870 26.844 488 301 16 2 472 12 460 2.88e-31 125
MS.gene069129.t1 MTR_8g006220 26.432 454 235 15 13 415 7 412 3.04e-31 126
MS.gene069129.t1 MTR_4g082810 38.000 200 94 7 220 404 211 395 3.31e-31 124
MS.gene069129.t1 MTR_8g009067 30.820 305 173 10 128 415 121 404 3.88e-31 125
MS.gene069129.t1 MTR_2g035020 26.877 506 292 17 13 473 12 484 7.45e-31 125
MS.gene069129.t1 MTR_5g072850 25.581 473 231 17 12 467 10 378 1.23e-30 122
MS.gene069129.t1 MTR_0536s0010 31.541 279 163 7 216 471 204 477 1.68e-30 124
MS.gene069129.t1 MTR_4g117890 27.632 304 166 9 205 471 189 475 3.14e-30 123
MS.gene069129.t1 MTR_8g008970 27.913 369 223 14 106 453 100 446 3.19e-30 125
MS.gene069129.t1 MTR_8g008970 29.545 264 163 5 219 474 544 792 4.99e-26 112
MS.gene069129.t1 MTR_8g032950 29.316 307 183 8 194 473 184 483 3.89e-30 122
MS.gene069129.t1 MTR_6g014000 40.299 134 79 1 337 469 21 154 1.11e-29 121
MS.gene069129.t1 MTR_7g047030 30.682 264 143 10 191 431 179 425 1.48e-29 120
MS.gene069129.t1 MTR_7g047270 30.682 264 143 10 191 431 179 425 1.48e-29 120
MS.gene069129.t1 MTR_5g067170 26.453 499 291 16 16 471 15 480 1.76e-29 120
MS.gene069129.t1 MTR_5g029800 26.157 497 291 16 17 471 16 478 3.74e-29 120
MS.gene069129.t1 MTR_0078s0060 28.571 273 160 9 191 443 179 436 4.68e-29 119
MS.gene069129.t1 MTR_8g074550 26.914 405 219 17 116 470 111 488 4.95e-29 120
MS.gene069129.t1 MTR_7g046490 27.348 362 215 12 130 467 123 460 7.25e-29 119
MS.gene069129.t1 MTR_7g071050 25.101 494 271 18 1 465 1 424 8.00e-29 118
MS.gene069129.t1 MTR_7g012120 30.903 288 153 10 217 471 210 484 1.04e-28 119
MS.gene069129.t1 MTR_7g039550 31.321 265 161 6 226 472 2 263 1.42e-28 114
MS.gene069129.t1 MTR_0078s0010 30.597 268 144 10 212 452 198 450 2.73e-28 117
MS.gene069129.t1 MTR_1g019520 33.981 206 117 3 280 466 3 208 3.09e-28 112
MS.gene069129.t1 MTR_8g056740 28.319 339 176 10 108 437 46 326 3.69e-28 115
MS.gene069129.t1 MTR_2g098430 27.400 427 246 16 13 406 7 402 9.73e-28 115
MS.gene069129.t1 MTR_6g078320 27.425 299 180 9 180 458 186 467 1.51e-27 115
MS.gene069129.t1 MTR_7g470610 42.143 140 77 2 277 412 128 267 7.30e-27 110
MS.gene069129.t1 MTR_7g070583 42.143 140 77 2 277 412 128 267 7.30e-27 110
MS.gene069129.t1 MTR_8g068360 26.279 430 261 14 1 406 1 398 8.59e-27 113
MS.gene069129.t1 MTR_5g027210 30.403 273 163 9 221 468 212 482 3.21e-26 111
MS.gene069129.t1 MTR_7g080960 32.642 193 83 4 280 472 324 469 3.27e-26 111
MS.gene069129.t1 MTR_6g013890 28.235 255 122 7 180 432 40 235 2.21e-25 105
MS.gene069129.t1 MTR_7g067330 26.180 466 254 18 12 462 9 399 7.05e-25 107
MS.gene069129.t1 MTR_8g466240 25.694 432 267 14 12 424 8 404 2.44e-24 105
MS.gene069129.t1 MTR_7g067120 26.638 458 260 19 12 450 9 409 4.44e-24 104
MS.gene069129.t1 MTR_8g009840 34.171 199 107 5 298 474 333 529 4.22e-23 102
MS.gene069129.t1 MTR_8g068330 39.062 128 74 2 283 406 268 395 2.03e-22 100
MS.gene069129.t1 MTR_1g107325 33.987 153 94 1 326 471 201 353 2.22e-21 95.9
MS.gene069129.t1 MTR_7g070760 31.579 209 95 5 218 414 29 201 2.59e-21 92.4
MS.gene069129.t1 MTR_8g068340 38.000 150 87 4 283 427 272 420 2.75e-21 96.7
MS.gene069129.t1 MTR_8g007565 23.020 404 285 11 12 404 7 395 3.07e-20 93.6
MS.gene069129.t1 MTR_1g090270 25.783 415 267 17 12 414 15 400 4.72e-20 92.8
MS.gene069129.t1 MTR_8g007650 23.020 404 285 11 12 404 7 395 6.74e-20 92.4
MS.gene069129.t1 MTR_0536s0030 36.076 158 84 4 332 472 196 353 7.37e-20 91.3
MS.gene069129.t1 MTR_7g070995 37.063 143 70 4 348 472 6 146 8.20e-20 86.7
MS.gene069129.t1 MTR_3g009490 32.065 184 103 5 307 468 3 186 1.13e-19 87.0
MS.gene069129.t1 MTR_5g090690 26.829 287 141 10 115 382 69 305 1.51e-19 90.5
MS.gene069129.t1 MTR_5g066410 36.641 131 79 3 278 404 241 371 2.38e-19 90.5
MS.gene069129.t1 MTR_3g479620 32.571 175 93 4 9 169 3 166 6.02e-19 84.7
MS.gene069129.t1 MTR_2g008226 24.706 425 283 17 7 414 4 408 1.37e-18 88.6
MS.gene069129.t1 MTR_6g042310 23.333 420 275 12 2 406 8 395 2.43e-18 87.8
MS.gene069129.t1 MTR_4g079270 25.166 453 282 18 7 437 2 419 6.20e-18 86.7
MS.gene069129.t1 MTR_2g014900 24.481 482 313 17 12 474 7 456 8.36e-18 85.9
MS.gene069129.t1 MTR_4g123553 24.574 411 261 17 12 406 15 392 1.12e-17 85.9
MS.gene069129.t1 MTR_3g435310 35.714 126 79 2 282 406 227 351 3.00e-17 84.0
MS.gene069129.t1 MTR_6g036650 24.697 413 265 15 12 406 18 402 3.86e-17 84.0
MS.gene069129.t1 MTR_4g079250 24.946 461 294 16 9 448 4 433 5.27e-17 83.6
MS.gene069129.t1 MTR_2g046620 23.301 412 265 14 12 406 16 393 2.46e-16 81.6
MS.gene069129.t1 MTR_2g008220 22.014 427 257 14 12 406 14 396 1.06e-15 79.7
MS.gene069129.t1 MTR_0199s0010 25.000 276 168 10 1 250 1 263 1.31e-15 77.4
MS.gene069129.t1 MTR_4g059370 33.333 138 86 3 283 414 190 327 1.62e-15 78.6
MS.gene069129.t1 MTR_4g077960 22.716 405 256 13 22 406 2 369 4.53e-15 77.4
MS.gene069129.t1 MTR_8g006230 28.636 220 132 8 112 328 49 246 1.78e-14 74.3
MS.gene069129.t1 MTR_2g008225 34.127 126 81 2 282 406 273 397 1.81e-14 75.9
MS.gene069129.t1 MTR_6g014195 27.442 215 118 8 11 198 9 212 3.25e-14 72.0
MS.gene069129.t1 MTR_0475s0030 42.857 63 36 0 366 428 13 75 5.03e-13 65.5
MS.gene069129.t1 MTR_8g028755 32.759 116 59 5 277 391 97 194 7.92e-11 62.4
MS.gene069129.t1 MTR_6g015160 49.020 51 25 1 366 415 30 80 8.15e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069129.t1 AT1G22380 35.759 481 282 12 8 470 9 480 1.84e-95 297
MS.gene069129.t1 AT1G22400 34.167 480 280 10 11 467 12 478 4.24e-92 288
MS.gene069129.t1 AT1G22360 34.511 481 280 10 12 470 10 477 5.17e-89 280
MS.gene069129.t1 AT1G22370 35.073 479 277 10 11 470 12 475 1.10e-88 279
MS.gene069129.t1 AT1G22360 34.304 481 269 11 12 470 10 465 1.39e-85 271
MS.gene069129.t1 AT1G22340 34.298 484 280 13 11 470 12 481 4.69e-84 267
MS.gene069129.t1 AT1G78270 34.702 487 294 13 1 470 1 480 1.66e-80 258
MS.gene069129.t1 AT3G11340 34.029 479 276 13 1 472 1 446 2.19e-79 254
MS.gene069129.t1 AT5G05900 34.656 479 252 15 13 470 9 447 7.55e-73 237
MS.gene069129.t1 AT5G05880 33.750 480 262 14 12 472 8 450 3.80e-69 228
MS.gene069129.t1 AT3G55710 31.263 483 288 14 6 472 2 456 6.59e-66 219
MS.gene069129.t1 AT3G55700 30.658 486 283 14 6 472 2 452 2.44e-64 215
MS.gene069129.t1 AT5G05860 33.471 484 264 13 6 470 3 447 5.05e-64 214
MS.gene069129.t1 AT3G46670 32.203 472 279 14 12 472 9 450 2.24e-63 212
MS.gene069129.t1 AT3G46660 33.128 486 277 14 1 472 6 457 2.44e-63 213
MS.gene069129.t1 AT4G15480 29.730 481 303 10 12 474 19 482 3.07e-62 210
MS.gene069129.t1 AT3G21560 29.592 490 303 13 1 468 1 470 3.86e-61 207
MS.gene069129.t1 AT5G05870 30.879 489 278 15 6 470 2 454 8.26e-61 206
MS.gene069129.t1 AT5G05890 30.864 486 272 14 12 472 8 454 3.26e-60 204
MS.gene069129.t1 AT3G02100 30.722 485 292 13 6 474 7 463 3.37e-60 204
MS.gene069129.t1 AT5G38010 31.875 480 286 14 4 470 2 453 1.81e-59 202
MS.gene069129.t1 AT1G22370 36.964 303 182 6 173 470 7 305 5.05e-59 197
MS.gene069129.t1 AT5G59590 30.435 483 280 17 2 467 3 446 6.59e-59 201
MS.gene069129.t1 AT3G46690 31.893 486 263 17 12 472 9 451 6.43e-58 198
MS.gene069129.t1 AT3G46680 29.959 484 283 15 6 470 3 449 1.64e-57 197
MS.gene069129.t1 AT3G46650 29.792 480 275 14 4 470 2 432 1.03e-56 194
MS.gene069129.t1 AT5G38040 31.749 463 273 15 20 470 18 449 2.61e-56 194
MS.gene069129.t1 AT3G46720 30.453 486 280 16 1 472 1 442 4.17e-56 193
MS.gene069129.t1 AT5G59580 30.316 475 281 16 12 471 9 448 1.21e-55 192
MS.gene069129.t1 AT2G43840 30.480 479 286 16 7 471 2 447 1.90e-55 191
MS.gene069129.t1 AT3G46700 30.189 477 278 16 12 472 9 446 8.31e-55 189
MS.gene069129.t1 AT2G31750 30.591 474 297 14 7 470 3 454 1.04e-54 189
MS.gene069129.t1 AT2G43840 30.290 482 283 17 7 471 2 447 1.04e-54 189
MS.gene069129.t1 AT2G31750 30.544 478 300 14 7 474 3 458 1.06e-54 190
MS.gene069129.t1 AT2G43820 30.353 481 286 15 7 472 2 448 1.39e-54 189
MS.gene069129.t1 AT4G15490 29.140 477 296 14 12 467 8 463 6.96e-54 188
MS.gene069129.t1 AT4G15500 28.721 477 303 10 7 467 4 459 8.38e-54 187
MS.gene069129.t1 AT2G31790 29.289 478 294 15 7 467 3 453 3.14e-53 186
MS.gene069129.t1 AT2G26480 30.361 471 289 14 13 474 9 449 3.16e-53 186
MS.gene069129.t1 AT2G28080 29.451 455 287 16 17 454 23 460 1.01e-51 182
MS.gene069129.t1 AT2G36970 29.352 494 304 17 4 474 3 474 1.77e-51 182
MS.gene069129.t1 AT1G05675 29.485 485 280 14 8 467 2 449 2.28e-50 178
MS.gene069129.t1 AT4G15550 27.579 504 277 18 9 467 10 470 2.70e-48 173
MS.gene069129.t1 AT1G05680 29.592 490 273 16 8 467 2 449 2.07e-47 170
MS.gene069129.t1 AT5G17050 29.289 478 294 17 12 474 12 460 2.83e-47 170
MS.gene069129.t1 AT4G34138 28.974 497 274 14 7 459 6 467 5.09e-47 170
MS.gene069129.t1 AT2G23260 28.958 480 298 18 5 470 3 453 1.28e-46 168
MS.gene069129.t1 AT1G05560 29.084 502 278 19 2 470 45 501 6.38e-46 167
MS.gene069129.t1 AT2G23250 30.388 464 280 18 21 473 7 438 6.53e-46 166
MS.gene069129.t1 AT2G15490 29.774 487 294 16 12 468 7 475 1.60e-45 166
MS.gene069129.t1 AT2G15480 28.484 488 299 17 12 468 10 478 2.22e-45 165
MS.gene069129.t1 AT2G29710 27.902 491 292 17 14 473 6 465 2.92e-45 164
MS.gene069129.t1 AT1G05560 29.091 495 273 19 9 470 2 451 3.09e-45 164
MS.gene069129.t1 AT5G17040 27.368 475 289 18 12 470 5 439 3.19e-45 164
MS.gene069129.t1 AT2G15490 29.735 491 292 17 12 468 7 478 5.37e-45 164
MS.gene069129.t1 AT2G15480 27.912 498 299 17 12 468 10 488 2.11e-44 162
MS.gene069129.t1 AT2G36760 28.827 503 294 17 12 472 14 494 2.21e-44 162
MS.gene069129.t1 AT1G30530 31.063 367 227 9 108 470 106 450 2.35e-44 162
MS.gene069129.t1 AT1G05530 28.713 505 265 20 9 470 2 454 4.78e-44 161
MS.gene069129.t1 AT1G01420 28.541 473 285 16 7 453 3 448 1.13e-43 160
MS.gene069129.t1 AT1G01420 28.541 473 285 16 7 453 6 451 1.13e-43 160
MS.gene069129.t1 AT3G16520 31.720 372 209 14 115 468 113 457 3.50e-43 159
MS.gene069129.t1 AT5G17030 29.659 381 230 10 105 470 98 455 3.56e-43 159
MS.gene069129.t1 AT2G29730 26.860 484 294 19 14 467 6 459 5.56e-43 158
MS.gene069129.t1 AT5G17040 30.719 306 190 9 170 470 49 337 7.60e-43 155
MS.gene069129.t1 AT4G34131 27.218 496 302 19 12 472 10 481 9.48e-43 158
MS.gene069129.t1 AT3G16520 31.728 353 196 13 115 446 113 441 2.85e-42 156
MS.gene069129.t1 AT3G16520 31.728 353 196 13 115 446 113 441 3.42e-42 155
MS.gene069129.t1 AT4G01070 26.638 473 291 15 6 450 2 446 4.04e-42 156
MS.gene069129.t1 AT2G36770 28.125 512 310 19 1 472 1 494 5.17e-42 156
MS.gene069129.t1 AT1G24100 28.854 506 273 20 2 470 3 458 7.83e-42 155
MS.gene069129.t1 AT2G36750 28.205 507 283 20 12 470 10 483 4.29e-41 154
MS.gene069129.t1 AT5G26310 28.486 502 267 23 9 463 4 460 5.82e-41 153
MS.gene069129.t1 AT2G36780 27.619 525 288 19 1 470 1 488 1.18e-40 152
MS.gene069129.t1 AT5G66690 28.858 499 269 22 9 463 4 460 1.94e-40 151
MS.gene069129.t1 AT4G34135 28.283 495 299 15 12 472 11 483 3.38e-40 151
MS.gene069129.t1 AT4G14090 28.953 487 270 18 11 467 12 452 1.16e-39 149
MS.gene069129.t1 AT2G36800 26.820 522 282 20 8 470 7 487 1.42e-39 149
MS.gene069129.t1 AT2G36790 27.112 509 295 20 12 472 13 493 2.97e-38 145
MS.gene069129.t1 AT3G53160 33.813 278 144 8 221 470 217 482 9.98e-38 144
MS.gene069129.t1 AT1G01390 27.465 426 253 12 7 406 3 398 1.35e-37 144
MS.gene069129.t1 AT1G01390 27.465 426 253 12 7 406 20 415 1.92e-37 144
MS.gene069129.t1 AT3G22250 25.000 448 297 12 6 435 2 428 2.27e-37 142
MS.gene069129.t1 AT1G73880 27.010 485 300 18 12 472 14 468 5.13e-37 142
MS.gene069129.t1 AT5G03490 27.273 495 287 17 3 468 10 460 1.16e-36 141
MS.gene069129.t1 AT3G21790 25.447 503 311 15 12 474 4 482 9.37e-36 139
MS.gene069129.t1 AT1G07250 31.613 310 167 12 169 459 178 461 2.41e-35 137
MS.gene069129.t1 AT2G30140 26.283 487 288 18 12 473 13 453 4.52e-35 136
MS.gene069129.t1 AT2G30140 26.078 487 290 18 12 473 13 454 1.05e-34 135
MS.gene069129.t1 AT3G50740 26.550 516 265 21 9 463 4 466 1.56e-34 135
MS.gene069129.t1 AT4G36770 29.477 363 197 13 123 454 113 447 2.04e-34 134
MS.gene069129.t1 AT1G07240 30.990 313 180 12 166 459 169 464 2.68e-33 132
MS.gene069129.t1 AT3G53150 27.579 504 304 20 12 470 22 509 6.22e-33 131
MS.gene069129.t1 AT2G29740 26.626 492 296 19 5 460 2 464 9.77e-33 130
MS.gene069129.t1 AT1G07260 30.667 300 169 10 180 460 182 461 1.19e-32 130
MS.gene069129.t1 AT2G29750 25.519 482 300 15 12 460 8 463 2.06e-32 129
MS.gene069129.t1 AT5G14860 27.593 511 281 26 9 470 5 475 7.57e-32 127
MS.gene069129.t1 AT2G18570 24.704 506 278 22 11 463 4 459 1.47e-31 126
MS.gene069129.t1 AT3G21760 27.812 320 195 7 114 416 115 415 1.87e-31 126
MS.gene069129.t1 AT3G21750 25.347 505 301 15 12 475 4 473 3.38e-31 125
MS.gene069129.t1 AT2G30150 25.720 486 296 15 12 474 13 456 8.77e-31 124
MS.gene069129.t1 AT4G15260 29.496 278 157 7 218 470 91 354 2.96e-30 121
MS.gene069129.t1 AT1G51210 24.558 452 288 17 11 446 19 433 6.40e-30 121
MS.gene069129.t1 AT5G37950 33.684 285 153 11 113 389 81 337 1.58e-29 119
MS.gene069129.t1 AT2G30150 25.572 481 293 15 17 474 2 440 2.16e-29 120
MS.gene069129.t1 AT3G21780 24.419 430 268 13 12 415 4 402 4.74e-29 119
MS.gene069129.t1 AT2G18560 30.515 272 145 10 219 463 115 369 4.94e-29 118
MS.gene069129.t1 AT4G15280 28.777 278 160 6 218 470 209 473 7.44e-29 119
MS.gene069129.t1 AT4G15280 28.986 276 158 6 218 468 241 503 1.08e-28 119
MS.gene069129.t1 AT5G37950 33.566 286 158 12 113 389 81 343 1.40e-28 116
MS.gene069129.t1 AT1G10400 25.299 502 280 21 12 467 7 459 4.11e-28 117
MS.gene069129.t1 AT3G21800 24.248 499 313 18 13 470 5 479 5.53e-28 116
MS.gene069129.t1 AT1G06000 28.676 272 161 8 216 467 172 430 1.36e-26 112
MS.gene069129.t1 AT5G49690 26.536 407 253 13 12 404 10 384 2.87e-26 111
MS.gene069129.t1 AT2G16890 22.934 484 323 16 12 470 9 467 7.57e-26 110
MS.gene069129.t1 AT2G16890 23.810 420 279 13 12 415 9 403 2.69e-24 105
MS.gene069129.t1 AT5G12890 35.233 193 102 7 220 401 224 404 5.52e-23 102
MS.gene069129.t1 AT5G54010 24.460 417 265 13 12 415 6 385 1.18e-20 94.7
MS.gene069129.t1 AT4G27570 23.923 418 263 15 12 414 7 384 2.11e-19 90.9
MS.gene069129.t1 AT5G65550 36.842 133 81 3 283 414 270 400 1.15e-18 89.0
MS.gene069129.t1 AT4G01070 24.024 333 215 11 6 328 2 306 1.66e-18 87.0
MS.gene069129.t1 AT4G27560 23.445 418 265 15 12 414 7 384 2.42e-18 87.8
MS.gene069129.t1 AT2G22590 24.029 412 271 13 12 406 15 401 1.05e-17 85.9
MS.gene069129.t1 AT5G53990 24.301 465 286 18 12 456 6 424 7.15e-15 77.0
MS.gene069129.t1 AT3G29630 23.340 467 291 16 12 456 6 427 1.45e-13 73.2
MS.gene069129.t1 AT4G34135 24.779 339 209 13 12 327 11 326 3.73e-13 70.9
MS.gene069129.t1 AT4G09500 23.542 463 292 19 12 456 6 424 1.04e-12 70.5
MS.gene069129.t1 AT1G64910 22.619 420 263 16 12 415 6 379 1.22e-12 70.1
MS.gene069129.t1 AT5G54060 23.947 451 297 16 5 436 6 429 4.19e-12 68.6
MS.gene069129.t1 AT2G22930 22.410 415 268 15 12 414 6 378 5.83e-11 64.7

Find 101 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGTTGCATTATTT+TGG 0.129986 5.3:+20531576 MS.gene069129:CDS
CTATTAGTTCTTGTTGCTTT+TGG 0.138157 5.3:+20531668 MS.gene069129:CDS
ACTGATTTGGCTGCTGAGTT+TGG 0.266869 5.3:+20531622 MS.gene069129:CDS
GGGCCTATGGTGTAGAGTTT+AGG 0.277656 5.3:-20533832 None:intergenic
AAGATTTAATTCAATATATA+AGG 0.286593 5.3:+20534496 MS.gene069129:CDS
ATTTGTTGATCAGCAAAATA+AGG 0.287071 5.3:-20534279 None:intergenic
GTGAGTGAGGTTTGGAAACT+TGG 0.292117 5.3:+20534315 MS.gene069129:CDS
ATTATTTCTTCTCTCTTCAT+TGG 0.297807 5.3:-20534009 None:intergenic
GTGGATATATATACCTCTAA+TGG 0.313407 5.3:-20531734 None:intergenic
GAAGAGAAGCATCCTGGATT+TGG 0.314492 5.3:+20531478 MS.gene069129:CDS
TCAAACATGGTACAAGAAAA+AGG 0.314881 5.3:+20534087 MS.gene069129:CDS
GGCCTATGGTGTAGAGTTTA+GGG 0.331169 5.3:-20533831 None:intergenic
CTGATTTGGCTGCTGAGTTT+GGG 0.334780 5.3:+20531623 MS.gene069129:CDS
GAGAAGAAATAATTGAGATT+TGG 0.335214 5.3:+20534019 MS.gene069129:CDS
CTGATCAACAAATAAATAGT+AGG 0.353536 5.3:+20534289 MS.gene069129:CDS
TGTAAAATCAGCCATGGATA+TGG 0.357578 5.3:+20534419 MS.gene069129:CDS
TGGTGACCTTGCTACTGATT+TGG 0.367535 5.3:+20531609 MS.gene069129:CDS
TAAATCTTGGAAGTTGTTGT+AGG 0.370730 5.3:-20534481 None:intergenic
TTATATATTGAATTAAATCT+TGG 0.370783 5.3:-20534494 None:intergenic
TCGGTTATATATGTTAGTTT+TGG 0.373327 5.3:+20533976 MS.gene069129:CDS
GTGGTGTGCCTATGATTTGT+TGG 0.376618 5.3:+20534256 MS.gene069129:CDS
TGAATTGAATGAGTCGGTTA+TGG 0.379896 5.3:-20531384 None:intergenic
ATTTGCTTTAAGTGATTGTT+TGG 0.382144 5.3:-20533743 None:intergenic
TCATTGCACTCCAAGAGGTT+TGG 0.384631 5.3:-20531706 None:intergenic
CAACCTCGTCTATACGGATA+TGG 0.388459 5.3:-20533711 None:intergenic
CGAAGTAAGTTTGCCATACC+TGG 0.411259 5.3:-20533646 None:intergenic
TTTCTGTGTTCCAAACCTCT+TGG 0.411613 5.3:+20531696 MS.gene069129:CDS
ATAGTCTTGAATTGAAGCTT+AGG 0.412111 5.3:-20531439 None:intergenic
TAGGAAAGTTGTGGAGAATA+TGG 0.412889 5.3:+20534362 MS.gene069129:CDS
GAAGTACAACCTCGTCTATA+CGG 0.414116 5.3:-20533717 None:intergenic
TGCAATGAACTTCCCATTAG+AGG 0.423671 5.3:+20531721 MS.gene069129:CDS
GTAGGTTTGTGAGTGAGGTT+TGG 0.428038 5.3:+20534307 MS.gene069129:CDS
ACCACCAGGACTCACACTCT+TGG 0.441655 5.3:-20534454 None:intergenic
CATAGTGAAGAGAAGCATCC+TGG 0.445229 5.3:+20531472 MS.gene069129:CDS
TGACTCTCAACCATTGAAAT+CGG 0.446084 5.3:+20533957 MS.gene069129:CDS
TGGATATATATACCTCTAAT+GGG 0.457829 5.3:-20531733 None:intergenic
CGCATCATAACAAACATTCC+AGG 0.459966 5.3:+20533628 MS.gene069129:CDS
TAATGGGTGGAATTCAACTT+TGG 0.460954 5.3:+20534221 MS.gene069129:CDS
AAATAGTAGGTTTGTGAGTG+AGG 0.465097 5.3:+20534302 MS.gene069129:CDS
GAGTCGGTTATGGATGTATT+CGG 0.467426 5.3:-20531374 None:intergenic
GAATATGGTGAATGATGTTA+TGG 0.469748 5.3:+20534377 MS.gene069129:CDS
TGAATGATGTTATGGTGAAT+AGG 0.471178 5.3:+20534385 MS.gene069129:CDS
AAGGGTAAAGGGTTGATTGT+TGG 0.471609 5.3:+20534141 MS.gene069129:CDS
AGCATCCTGGATTTGGAGAA+AGG 0.475413 5.3:+20531485 MS.gene069129:CDS
AAATAAGGCCAACAAATCAT+AGG 0.477093 5.3:-20534264 None:intergenic
GAAACTTGGGTTGGATATGA+AGG 0.480309 5.3:+20534329 MS.gene069129:CDS
GCTTTAGCATTGAATTTACA+TGG 0.483622 5.3:-20531303 None:intergenic
GTGACAAAACTTCCTCTTGT+GGG 0.488001 5.3:-20534170 None:intergenic
GAATTTACATGGCCTTGTGC+TGG 0.491907 5.3:-20531292 None:intergenic
TAAGAGCAATTTATTCAAAG+TGG 0.492289 5.3:+20533912 MS.gene069129:CDS
AGCCATGGATATGGCTAAGT+TGG 0.496465 5.3:+20534428 MS.gene069129:CDS
TGAGTGAGGTTTGGAAACTT+GGG 0.500077 5.3:+20534316 MS.gene069129:CDS
ACTCATACTCAACACATTTG+AGG 0.503493 5.3:+20533768 MS.gene069129:CDS
ACATATATAACCGATTTCAA+TGG 0.506428 5.3:-20533967 None:intergenic
ATTGTGTCACTGAGTTTGTA+TGG 0.506708 5.3:+20531520 MS.gene069129:CDS
AGGATTATTAAGTGAGCTTG+AGG 0.508071 5.3:+20534107 MS.gene069129:CDS
CCTATCCTTTCTCCAAATCC+AGG 0.509024 5.3:-20531490 None:intergenic
CATAACAAACATTCCAGGTA+TGG 0.511487 5.3:+20533633 MS.gene069129:CDS
TAGTCTTGAATTGAAGCTTA+GGG 0.511757 5.3:-20531438 None:intergenic
GAAATAATTGAGATTTGGCA+TGG 0.518839 5.3:+20534024 MS.gene069129:CDS
ATATGAAGGATGTTTGTGAT+AGG 0.519622 5.3:+20534343 MS.gene069129:CDS
AAGGAACTAGCAAGGGTAAA+GGG 0.521603 5.3:+20534130 MS.gene069129:CDS
AGAGTCAAGCCACGCCATGC+AGG 0.530095 5.3:-20533941 None:intergenic
ACATGGCCTTGTGCTGGACA+TGG 0.534043 5.3:-20531286 None:intergenic
GAAGGAACTAGCAAGGGTAA+AGG 0.536464 5.3:+20534129 MS.gene069129:CDS
TAAAGGGTTGATTGTTGGAT+GGG 0.536534 5.3:+20534146 MS.gene069129:CDS
TGAGGTTTGGAAACTTGGGT+TGG 0.537607 5.3:+20534320 MS.gene069129:CDS
ATCTTGGAAGTTGTTGTAGG+AGG 0.539036 5.3:-20534478 None:intergenic
GTGGTGATGAAGAGGGCCTA+TGG 0.544580 5.3:-20533845 None:intergenic
GCATCCAAGAGTGTGAGTCC+TGG 0.552305 5.3:+20534450 MS.gene069129:CDS
ACTTTGGAAAGTGTGGTTTG+TGG 0.554343 5.3:+20534237 MS.gene069129:CDS
GAATTCAACTTTGGAAAGTG+TGG 0.562112 5.3:+20534230 MS.gene069129:CDS
CATCATTGAATTGAATGAGT+CGG 0.571257 5.3:-20531390 None:intergenic
GTAAAGGGTTGATTGTTGGA+TGG 0.572022 5.3:+20534145 MS.gene069129:CDS
TTATTAAGTGAGCTTGAGGA+AGG 0.576667 5.3:+20534111 MS.gene069129:CDS
TGTGACAAAACTTCCTCTTG+TGG 0.583263 5.3:-20534171 None:intergenic
TCCAAGAGTGTGAGTCCTGG+TGG 0.586272 5.3:+20534453 MS.gene069129:CDS
TATGGATGTATTCGGTGTTG+AGG 0.586759 5.3:-20531366 None:intergenic
CATGGCCTTGTGCTGGACAT+GGG 0.589394 5.3:-20531285 None:intergenic
CATGGGAAGATTAGCACATG+TGG 0.591703 5.3:-20531268 None:intergenic
CCTGGATTTGGAGAAAGGAT+AGG 0.594736 5.3:+20531490 MS.gene069129:CDS
TGTTGGATGGGTCCCACAAG+AGG 0.597020 5.3:+20534158 MS.gene069129:CDS
ATCTTCCCATGTCCAGCACA+AGG 0.604045 5.3:+20531280 MS.gene069129:CDS
TGCCAACTTAGCCATATCCA+TGG 0.606456 5.3:-20534430 None:intergenic
ATGGGTGATTAGGTCAAACA+TGG 0.609105 5.3:+20534074 MS.gene069129:CDS
TTCCCTAAACTCTACACCAT+AGG 0.611308 5.3:+20533829 MS.gene069129:CDS
GGAGTTTGTAAAATCAGCCA+TGG 0.612612 5.3:+20534413 MS.gene069129:CDS
TGGATAGAACCTGCATGGCG+TGG 0.616199 5.3:+20533932 MS.gene069129:CDS
CTTGAGGAAGGAACTAGCAA+GGG 0.620729 5.3:+20534123 MS.gene069129:CDS
CAAAGTGGATAGAACCTGCA+TGG 0.622228 5.3:+20533927 MS.gene069129:CDS
TTGTTGTAGGAGGAACCACC+AGG 0.625499 5.3:-20534468 None:intergenic
GCTTGAGGAAGGAACTAGCA+AGG 0.626424 5.3:+20534122 MS.gene069129:CDS
ACGAATTTGTGAGAGGACTG+AGG 0.626974 5.3:-20533800 None:intergenic
TGTTTGTGATAGGAAAGTTG+TGG 0.627468 5.3:+20534353 MS.gene069129:CDS
CAGCAGCCAAATCAGTAGCA+AGG 0.634571 5.3:-20531615 None:intergenic
GAAGTTCATTGCACTCCAAG+AGG 0.641830 5.3:-20531711 None:intergenic
GTATTGAGGTGGTGATGAAG+AGG 0.644898 5.3:-20533853 None:intergenic
TGTTATGGTGAATAGGAATG+AGG 0.664290 5.3:+20534392 MS.gene069129:CDS
AGTGAATACGAATTTGTGAG+AGG 0.665978 5.3:-20533807 None:intergenic
TATTGAGGTGGTGATGAAGA+GGG 0.674916 5.3:-20533852 None:intergenic
GAACCATATCCGTATAGACG+AGG 0.709030 5.3:+20533708 MS.gene069129:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATTTAATTCAATATATA+AGG + chr5.3:20534496-20534515 MS.gene069129:CDS 10.0%
!! TTATATATTGAATTAAATCT+TGG - chr5.3:20534497-20534516 None:intergenic 10.0%
!!! ATTGTTTTTTAAAATTTCAA+TGG - chr5.3:20531971-20531990 None:intergenic 10.0%
!!! TATTAAGCTATTTTTTTTTA+GGG + chr5.3:20532502-20532521 MS.gene069129:intron 10.0%
!!! TATTTGTTGAATTAATTTTT+AGG + chr5.3:20533589-20533608 MS.gene069129:intron 10.0%
!!! TTGTTTTTTAAAATTTCAAT+GGG - chr5.3:20531970-20531989 None:intergenic 10.0%
!! TATATCAAGAATTATGTATT+TGG + chr5.3:20531944-20531963 MS.gene069129:intron 15.0%
!!! AATAGCTTAATAGTTTTATT+TGG - chr5.3:20532494-20532513 None:intergenic 15.0%
!!! CTATTAAGCTATTTTTTTTT+AGG + chr5.3:20532501-20532520 MS.gene069129:intron 15.0%
!! AACTATTTAGTGAAATGAAA+AGG - chr5.3:20533086-20533105 None:intergenic 20.0%
!! AGAATAAAATCAAGAGAATA+TGG - chr5.3:20531818-20531837 None:intergenic 20.0%
!! GAGTGAACATTTAATAAATA+GGG - chr5.3:20532665-20532684 None:intergenic 20.0%
!! TAAATGATAAACAAAAGTGA+TGG - chr5.3:20532687-20532706 None:intergenic 20.0%
!! TATTTAGTGAAATGAAAAGT+AGG - chr5.3:20533190-20533209 None:intergenic 20.0%
!!! ACAAGTTTTCTAAAAAAACT+AGG + chr5.3:20532729-20532748 MS.gene069129:intron 20.0%
!!! ATAGCAAAAAACAGTTTTTA+TGG + chr5.3:20534055-20534074 MS.gene069129:CDS 20.0%
!!! ATTATTTTGGATGGAATATT+TGG + chr5.3:20531589-20531608 MS.gene069129:CDS 20.0%
!!! CAAGTTTTCTAAAAAAACTA+GGG + chr5.3:20532730-20532749 MS.gene069129:intron 20.0%
!!! CTTCTTTAAACTTTTTAGTA+CGG - chr5.3:20531918-20531937 None:intergenic 20.0%
!!! GAAAATAAGTTGCATTATTT+TGG + chr5.3:20531576-20531595 MS.gene069129:CDS 20.0%
!!! TAGCAAAAAACAGTTTTTAT+GGG + chr5.3:20534056-20534075 MS.gene069129:CDS 20.0%
!!! TTTATCTTACCTATTTTAAG+AGG + chr5.3:20532703-20532722 MS.gene069129:intron 20.0%
! AAAACAATAGAGAGAGAAAA+AGG + chr5.3:20532270-20532289 MS.gene069129:intron 25.0%
! AATAGATAGATAGATAGACT+TGG + chr5.3:20532453-20532472 MS.gene069129:intron 25.0%
! AATGAAAAGTAGGTTCAAAA+TGG - chr5.3:20533180-20533199 None:intergenic 25.0%
! ACATTTCCCAAAAAACTATT+AGG + chr5.3:20532925-20532944 MS.gene069129:intron 25.0%
! ATTTAGTGAAATGAAAAGGT+TGG - chr5.3:20533082-20533101 None:intergenic 25.0%
! CTCTTAAAGAAAAAAGATGA+TGG - chr5.3:20533898-20533917 None:intergenic 25.0%
! CTGATCAACAAATAAATAGT+AGG + chr5.3:20534289-20534308 MS.gene069129:CDS 25.0%
! GAGAAGAAATAATTGAGATT+TGG + chr5.3:20534019-20534038 MS.gene069129:CDS 25.0%
! GGAGTGAACATTTAATAAAT+AGG - chr5.3:20532666-20532685 None:intergenic 25.0%
! GTGTTTGTATCGAAATAATT+AGG - chr5.3:20533553-20533572 None:intergenic 25.0%
! TAAAATATTTGACGAAGATG+CGG + chr5.3:20532395-20532414 MS.gene069129:intron 25.0%
! TAAGAGCAATTTATTCAAAG+TGG + chr5.3:20533912-20533931 MS.gene069129:CDS 25.0%
! TGGATATATATACCTCTAAT+GGG - chr5.3:20531736-20531755 None:intergenic 25.0%
! TTCCCATGTAAGAAATAATT+TGG - chr5.3:20532166-20532185 None:intergenic 25.0%
!! ACATATATAACCGATTTCAA+TGG - chr5.3:20533970-20533989 None:intergenic 25.0%
!! ATGAGTGAGTAATACATTTT+TGG - chr5.3:20532033-20532052 None:intergenic 25.0%
!! ATTATTTCTTCTCTCTTCAT+TGG - chr5.3:20534012-20534031 None:intergenic 25.0%
!! ATTTGCTTTAAGTGATTGTT+TGG - chr5.3:20533746-20533765 None:intergenic 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG - chr5.3:20534282-20534301 None:intergenic 25.0%
!! CAAGAAAAAACTTCTACTTT+TGG + chr5.3:20532870-20532889 MS.gene069129:intron 25.0%
!! GATGGTTCAATTTTTGAATT+TGG - chr5.3:20533354-20533373 None:intergenic 25.0%
!! GTCCAAATTATTTCTTACAT+GGG + chr5.3:20532161-20532180 MS.gene069129:intron 25.0%
!! TGAGTGAGTAATACATTTTT+GGG - chr5.3:20532032-20532051 None:intergenic 25.0%
!! TGTCCAAATTATTTCTTACA+TGG + chr5.3:20532160-20532179 MS.gene069129:intron 25.0%
!!! ACTTGTTATCCTCTTAAAAT+AGG - chr5.3:20532715-20532734 None:intergenic 25.0%
!!! ATAAGTTGCATTATTTTGGA+TGG + chr5.3:20531580-20531599 MS.gene069129:CDS 25.0%
!!! ATGATTTTTTTGTGGTATTG+AGG - chr5.3:20533870-20533889 None:intergenic 25.0%
!!! CAAAAACGTTTAGAACTTTT+AGG + chr5.3:20533031-20533050 MS.gene069129:intron 25.0%
!!! CAAAAGTAGAAGTTTTTTCT+TGG - chr5.3:20532872-20532891 None:intergenic 25.0%
!!! TATTAGTTCTTGTTGCTTTT+GGG + chr5.3:20531669-20531688 MS.gene069129:CDS 25.0%
!!! TCGGTTATATATGTTAGTTT+TGG + chr5.3:20533976-20533995 MS.gene069129:CDS 25.0%
!!! TGGAAATGATGATTTTTTTG+TGG - chr5.3:20533878-20533897 None:intergenic 25.0%
!!! TTCCATCCTAATAGTTTTTT+GGG - chr5.3:20532934-20532953 None:intergenic 25.0%
!!! TTTCCATCCTAATAGTTTTT+TGG - chr5.3:20532935-20532954 None:intergenic 25.0%
AAAAAGGAAGAGAGAGAATA+TGG + chr5.3:20532286-20532305 MS.gene069129:intron 30.0%
AAAAGTAGGTTCAAAATGGA+CGG - chr5.3:20533176-20533195 None:intergenic 30.0%
AAATAAGGCCAACAAATCAT+AGG - chr5.3:20534267-20534286 None:intergenic 30.0%
AAGGTTTAGTATATACCATG+AGG + chr5.3:20532080-20532099 MS.gene069129:intron 30.0%
AGGTTTAGTATATACCATGA+GGG + chr5.3:20532081-20532100 MS.gene069129:intron 30.0%
ATACTAAACCTTGTGAATAC+AGG - chr5.3:20532072-20532091 None:intergenic 30.0%
ATATGAAGGATGTTTGTGAT+AGG + chr5.3:20534343-20534362 MS.gene069129:CDS 30.0%
ATTTGCAAATAGCAATTGCT+AGG + chr5.3:20532421-20532440 MS.gene069129:intron 30.0%
CATCATTGAATTGAATGAGT+CGG - chr5.3:20531393-20531412 None:intergenic 30.0%
GAAATAATTGAGATTTGGCA+TGG + chr5.3:20534024-20534043 MS.gene069129:CDS 30.0%
GAATATGGTGAATGATGTTA+TGG + chr5.3:20534377-20534396 MS.gene069129:CDS 30.0%
GTCAAAAAGTTGTAAGAAAG+TGG + chr5.3:20532337-20532356 MS.gene069129:intron 30.0%
GTGGATATATATACCTCTAA+TGG - chr5.3:20531737-20531756 None:intergenic 30.0%
TAAATCTTGGAAGTTGTTGT+AGG - chr5.3:20534484-20534503 None:intergenic 30.0%
TCAAACATGGTACAAGAAAA+AGG + chr5.3:20534087-20534106 MS.gene069129:CDS 30.0%
TGAATGATGTTATGGTGAAT+AGG + chr5.3:20534385-20534404 MS.gene069129:CDS 30.0%
TTCAAGTGTGTTTGTATACA+TGG + chr5.3:20533149-20533168 MS.gene069129:intron 30.0%
TTCCCAAAAAACTATTAGGA+TGG + chr5.3:20532929-20532948 MS.gene069129:intron 30.0%
TTGGGTCATGCTATTAAAAA+AGG - chr5.3:20532014-20532033 None:intergenic 30.0%
! AACAGTTTTTATGGGTGATT+AGG + chr5.3:20534064-20534083 MS.gene069129:CDS 30.0%
! ATAGTCTTGAATTGAAGCTT+AGG - chr5.3:20531442-20531461 None:intergenic 30.0%
! GCTTTAGCATTGAATTTACA+TGG - chr5.3:20531306-20531325 None:intergenic 30.0%
! TAGTCTTGAATTGAAGCTTA+GGG - chr5.3:20531441-20531460 None:intergenic 30.0%
! TTCATTTTCTCTCTTCTCAT+TGG + chr5.3:20532244-20532263 MS.gene069129:intron 30.0%
! TTGTTTTCTCGACAAAAACT+TGG - chr5.3:20533685-20533704 None:intergenic 30.0%
!! AAATGTTAACTTGTGCTCTT+GGG - chr5.3:20532911-20532930 None:intergenic 30.0%
!! ATCGTGCGATTTTAATAAGA+TGG - chr5.3:20533372-20533391 None:intergenic 30.0%
!! GAATTAATTTTTAGGAGACG+AGG + chr5.3:20533597-20533616 MS.gene069129:intron 30.0%
!!! ATTTTTTTGTGGTATTGAGG+TGG - chr5.3:20533867-20533886 None:intergenic 30.0%
!!! CTATTAGTTCTTGTTGCTTT+TGG + chr5.3:20531668-20531687 MS.gene069129:CDS 30.0%
!!! GTGCTTTTTTGACACATAAT+GGG + chr5.3:20534205-20534224 MS.gene069129:CDS 30.0%
AAATAGTAGGTTTGTGAGTG+AGG + chr5.3:20534302-20534321 MS.gene069129:CDS 35.0%
AACTGTTCGTTCAAAATGGA+CGG - chr5.3:20533315-20533334 None:intergenic 35.0%
ACATGGACGGATATAACATA+AGG + chr5.3:20532115-20532134 MS.gene069129:intron 35.0%
ACTCATACTCAACACATTTG+AGG + chr5.3:20533768-20533787 MS.gene069129:CDS 35.0%
AGAAACATGCCAAGTGAATA+AGG - chr5.3:20533459-20533478 None:intergenic 35.0%
AGGATTATTAAGTGAGCTTG+AGG + chr5.3:20534107-20534126 MS.gene069129:CDS 35.0%
AGTGAATACGAATTTGTGAG+AGG - chr5.3:20533810-20533829 None:intergenic 35.0%
CATAACAAACATTCCAGGTA+TGG + chr5.3:20533633-20533652 MS.gene069129:CDS 35.0%
CGCAAATAATTACCTACAAC+GGG - chr5.3:20532642-20532661 None:intergenic 35.0%
GAATACAGGTGTGAAAAAAG+TGG - chr5.3:20532058-20532077 None:intergenic 35.0%
GCGCAAATAATTACCTACAA+CGG - chr5.3:20532643-20532662 None:intergenic 35.0%
GTCAACAAAGTTGTCACAAA+TGG - chr5.3:20532220-20532239 None:intergenic 35.0%
TAAGGTCTAGTGTGTGTATA+TGG - chr5.3:20533441-20533460 None:intergenic 35.0%
TAGGAAAGTTGTGGAGAATA+TGG + chr5.3:20534362-20534381 MS.gene069129:CDS 35.0%
TGAATTGAATGAGTCGGTTA+TGG - chr5.3:20531387-20531406 None:intergenic 35.0%
TGACTCTCAACCATTGAAAT+CGG + chr5.3:20533957-20533976 MS.gene069129:CDS 35.0%
TGTAAAATCAGCCATGGATA+TGG + chr5.3:20534419-20534438 MS.gene069129:CDS 35.0%
TGTGAACTGTTCGTTCAAAA+TGG - chr5.3:20533319-20533338 None:intergenic 35.0%
TGTTATGGTGAATAGGAATG+AGG + chr5.3:20534392-20534411 MS.gene069129:CDS 35.0%
TGTTTGTGATAGGAAAGTTG+TGG + chr5.3:20534353-20534372 MS.gene069129:CDS 35.0%
TTATTAAGTGAGCTTGAGGA+AGG + chr5.3:20534111-20534130 MS.gene069129:CDS 35.0%
! ATGTGGAGAAGATTTTTCCT+TGG - chr5.3:20531254-20531273 None:intergenic 35.0%
! ATTGTGTCACTGAGTTTGTA+TGG + chr5.3:20531520-20531539 MS.gene069129:CDS 35.0%
! CGGATCGATGACTAAATTTT+TGG - chr5.3:20532612-20532631 None:intergenic 35.0%
! GAATTCAACTTTGGAAAGTG+TGG + chr5.3:20534230-20534249 MS.gene069129:CDS 35.0%
! GTTTTGTCACATAAGGCAAT+TGG + chr5.3:20534183-20534202 MS.gene069129:CDS 35.0%
! TAAAGGGTTGATTGTTGGAT+GGG + chr5.3:20534146-20534165 MS.gene069129:CDS 35.0%
! TAATGGGTGGAATTCAACTT+TGG + chr5.3:20534221-20534240 MS.gene069129:CDS 35.0%
! TTTTCACACCTGTATTCACA+AGG + chr5.3:20532061-20532080 MS.gene069129:intron 35.0%
!! AATGTTAACTTGTGCTCTTG+GGG - chr5.3:20532910-20532929 None:intergenic 35.0%
!! AGAGGAAGTTTTGTCACATA+AGG + chr5.3:20534176-20534195 MS.gene069129:CDS 35.0%
!! CTCTAAGAGCAATTTTAGAG+TGG - chr5.3:20531756-20531775 None:intergenic 35.0%
!! GAAATGTTAACTTGTGCTCT+TGG - chr5.3:20532912-20532931 None:intergenic 35.0%
!! TTCCTTAACTTGTACCCTTA+GGG - chr5.3:20532771-20532790 None:intergenic 35.0%
!!! CTTTTTTGACACATAATGGG+TGG + chr5.3:20534208-20534227 MS.gene069129:CDS 35.0%
!!! GGTGCTTTTTTGACACATAA+TGG + chr5.3:20534204-20534223 MS.gene069129:CDS 35.0%
AAGGAACTAGCAAGGGTAAA+GGG + chr5.3:20534130-20534149 MS.gene069129:CDS 40.0%
ATAATTACCTACAACGGGTC+AGG - chr5.3:20532637-20532656 None:intergenic 40.0%
ATCTTGGAAGTTGTTGTAGG+AGG - chr5.3:20534481-20534500 None:intergenic 40.0%
ATGGGTGATTAGGTCAAACA+TGG + chr5.3:20534074-20534093 MS.gene069129:CDS 40.0%
CACACTAGACCTTATTCACT+TGG + chr5.3:20533447-20533466 MS.gene069129:intron 40.0%
CGCATCATAACAAACATTCC+AGG + chr5.3:20533628-20533647 MS.gene069129:CDS 40.0%
GAAGTACAACCTCGTCTATA+CGG - chr5.3:20533720-20533739 None:intergenic 40.0%
GACGGATATAACATAAGGTG+TGG + chr5.3:20532120-20532139 MS.gene069129:intron 40.0%
GAGTCGGTTATGGATGTATT+CGG - chr5.3:20531377-20531396 None:intergenic 40.0%
GGAGTTTGTAAAATCAGCCA+TGG + chr5.3:20534413-20534432 MS.gene069129:CDS 40.0%
GTGACAAAACTTCCTCTTGT+GGG - chr5.3:20534173-20534192 None:intergenic 40.0%
TAATTACCTACAACGGGTCA+GGG - chr5.3:20532636-20532655 None:intergenic 40.0%
TGAGTGAGGTTTGGAAACTT+GGG + chr5.3:20534316-20534335 MS.gene069129:CDS 40.0%
TGCAATGAACTTCCCATTAG+AGG + chr5.3:20531721-20531740 MS.gene069129:CDS 40.0%
TGTGACAAAACTTCCTCTTG+TGG - chr5.3:20534174-20534193 None:intergenic 40.0%
TTCCCTAAACTCTACACCAT+AGG + chr5.3:20533829-20533848 MS.gene069129:CDS 40.0%
TTGTGTCTGTCGTCCATTTA+GGG + chr5.3:20533054-20533073 MS.gene069129:intron 40.0%
TTTCTGTGTTCCAAACCTCT+TGG + chr5.3:20531696-20531715 MS.gene069129:CDS 40.0%
! AAGGGTAAAGGGTTGATTGT+TGG + chr5.3:20534141-20534160 MS.gene069129:CDS 40.0%
! ACTTTGGAAAGTGTGGTTTG+TGG + chr5.3:20534237-20534256 MS.gene069129:CDS 40.0%
! GTAAAGGGTTGATTGTTGGA+TGG + chr5.3:20534145-20534164 MS.gene069129:CDS 40.0%
! TATTGAGGTGGTGATGAAGA+GGG - chr5.3:20533855-20533874 None:intergenic 40.0%
!! ATTTTTAGGAGACGAGGACA+TGG + chr5.3:20533603-20533622 MS.gene069129:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG + chr5.3:20532754-20532773 MS.gene069129:intron 40.0%
!! GAAACTTGGGTTGGATATGA+AGG + chr5.3:20534329-20534348 MS.gene069129:CDS 40.0%
!! GTTCCTTAACTTGTACCCTT+AGG - chr5.3:20532772-20532791 None:intergenic 40.0%
!! TATGGATGTATTCGGTGTTG+AGG - chr5.3:20531369-20531388 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG + chr5.3:20532753-20532772 MS.gene069129:intron 40.0%
AATTACCTACAACGGGTCAG+GGG - chr5.3:20532635-20532654 None:intergenic 45.0%
ACGAATTTGTGAGAGGACTG+AGG - chr5.3:20533803-20533822 None:intergenic 45.0%
AGCATCCTGGATTTGGAGAA+AGG + chr5.3:20531485-20531504 MS.gene069129:CDS 45.0%
AGCCATGGATATGGCTAAGT+TGG + chr5.3:20534428-20534447 MS.gene069129:CDS 45.0%
CAAAGTGGATAGAACCTGCA+TGG + chr5.3:20533927-20533946 MS.gene069129:CDS 45.0%
CAACCTCGTCTATACGGATA+TGG - chr5.3:20533714-20533733 None:intergenic 45.0%
CATGGGAAGATTAGCACATG+TGG - chr5.3:20531271-20531290 None:intergenic 45.0%
CCTATCCTTTCTCCAAATCC+AGG - chr5.3:20531493-20531512 None:intergenic 45.0%
CCTGGATTTGGAGAAAGGAT+AGG + chr5.3:20531490-20531509 MS.gene069129:CDS 45.0%
CGAAGTAAGTTTGCCATACC+TGG - chr5.3:20533649-20533668 None:intergenic 45.0%
CTTGAGGAAGGAACTAGCAA+GGG + chr5.3:20534123-20534142 MS.gene069129:CDS 45.0%
GAACCATATCCGTATAGACG+AGG + chr5.3:20533708-20533727 MS.gene069129:CDS 45.0%
GAAGGAACTAGCAAGGGTAA+AGG + chr5.3:20534129-20534148 MS.gene069129:CDS 45.0%
GAAGTTCATTGCACTCCAAG+AGG - chr5.3:20531714-20531733 None:intergenic 45.0%
GGAGTAGCTACAAACATGGA+CGG + chr5.3:20532102-20532121 MS.gene069129:intron 45.0%
GGCCTATGGTGTAGAGTTTA+GGG - chr5.3:20533834-20533853 None:intergenic 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG + chr5.3:20534307-20534326 MS.gene069129:CDS 45.0%
GTGAGTGAGGTTTGGAAACT+TGG + chr5.3:20534315-20534334 MS.gene069129:CDS 45.0%
GTTGTGTCTGTCGTCCATTT+AGG + chr5.3:20533053-20533072 MS.gene069129:intron 45.0%
TCATTGCACTCCAAGAGGTT+TGG - chr5.3:20531709-20531728 None:intergenic 45.0%
TGAGGGAGTAGCTACAAACA+TGG + chr5.3:20532098-20532117 MS.gene069129:intron 45.0%
TGAGGTTTGGAAACTTGGGT+TGG + chr5.3:20534320-20534339 MS.gene069129:CDS 45.0%
TGCCAACTTAGCCATATCCA+TGG - chr5.3:20534433-20534452 None:intergenic 45.0%
TGCTCTTGGGGCATAAGTTA+AGG - chr5.3:20532898-20532917 None:intergenic 45.0%
TGTTTGTAGCTACTCCCTCA+TGG - chr5.3:20532098-20532117 None:intergenic 45.0%
! GAAAAGGTTGGCTCCCTAAA+TGG - chr5.3:20533070-20533089 None:intergenic 45.0%
! GTATTGAGGTGGTGATGAAG+AGG - chr5.3:20533856-20533875 None:intergenic 45.0%
! GTGGTGTGCCTATGATTTGT+TGG + chr5.3:20534256-20534275 MS.gene069129:CDS 45.0%
! TGCCCTAAGGGTACAAGTTA+AGG + chr5.3:20532766-20532785 MS.gene069129:intron 45.0%
! TGGTGACCTTGCTACTGATT+TGG + chr5.3:20531609-20531628 MS.gene069129:CDS 45.0%
!! ACTGATTTGGCTGCTGAGTT+TGG + chr5.3:20531622-20531641 MS.gene069129:CDS 45.0%
!! CATAGTGAAGAGAAGCATCC+TGG + chr5.3:20531472-20531491 MS.gene069129:CDS 45.0%
!! CTGATTTGGCTGCTGAGTTT+GGG + chr5.3:20531623-20531642 MS.gene069129:CDS 45.0%
!! GAAGAGAAGCATCCTGGATT+TGG + chr5.3:20531478-20531497 MS.gene069129:CDS 45.0%
!! GAATTTACATGGCCTTGTGC+TGG - chr5.3:20531295-20531314 None:intergenic 45.0%
!! TATATAATCATTAATATTAT+TGG + chr5.3:20532554-20532573 MS.gene069129:intron 5.0%
ATCTTCCCATGTCCAGCACA+AGG + chr5.3:20531280-20531299 MS.gene069129:CDS 50.0%
CAGCAGCCAAATCAGTAGCA+AGG - chr5.3:20531618-20531637 None:intergenic 50.0%
GCTTGAGGAAGGAACTAGCA+AGG + chr5.3:20534122-20534141 MS.gene069129:CDS 50.0%
GGGCCTATGGTGTAGAGTTT+AGG - chr5.3:20533835-20533854 None:intergenic 50.0%
TTGTTGTAGGAGGAACCACC+AGG - chr5.3:20534471-20534490 None:intergenic 50.0%
ACCACCAGGACTCACACTCT+TGG - chr5.3:20534457-20534476 None:intergenic 55.0%
TGGATAGAACCTGCATGGCG+TGG + chr5.3:20533932-20533951 MS.gene069129:CDS 55.0%
TGTTGGATGGGTCCCACAAG+AGG + chr5.3:20534158-20534177 MS.gene069129:CDS 55.0%
! GCATCCAAGAGTGTGAGTCC+TGG + chr5.3:20534450-20534469 MS.gene069129:CDS 55.0%
! GTGGTGATGAAGAGGGCCTA+TGG - chr5.3:20533848-20533867 None:intergenic 55.0%
! TCCAAGAGTGTGAGTCCTGG+TGG + chr5.3:20534453-20534472 MS.gene069129:CDS 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG - chr5.3:20531289-20531308 None:intergenic 55.0%
!! CATGGCCTTGTGCTGGACAT+GGG - chr5.3:20531288-20531307 None:intergenic 55.0%
AGAGTCAAGCCACGCCATGC+AGG - chr5.3:20533944-20533963 None:intergenic 60.0%
TACCTACAACGGGTCAGGGG+CGG - chr5.3:20532632-20532651 None:intergenic 60.0%
ATCCGCCCCTGACCCGTTGT+AGG + chr5.3:20532627-20532646 MS.gene069129:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 20531238 20534533 20531238 ID=MS.gene069129
chr5.3 mRNA 20531238 20534533 20531238 ID=MS.gene069129.t1;Parent=MS.gene069129
chr5.3 exon 20531238 20531742 20531238 ID=MS.gene069129.t1.exon1;Parent=MS.gene069129.t1
chr5.3 CDS 20531238 20531742 20531238 ID=cds.MS.gene069129.t1;Parent=MS.gene069129.t1
chr5.3 exon 20533611 20534533 20533611 ID=MS.gene069129.t1.exon2;Parent=MS.gene069129.t1
chr5.3 CDS 20533611 20534533 20533611 ID=cds.MS.gene069129.t1;Parent=MS.gene069129.t1
Gene Sequence

>MS.gene069129

ATGGAAACACAAGCCAAGGAAAAATCTTCTCCACATGTGCTAATCTTCCCATGTCCAGCACAAGGCCATGTAAATTCAATGCTAAAGCTAGCTGAACTTCTTGCAATTCAAAACATCTACATAACTTTCCTCAACACCGAATACATCCATAACCGACTCATTCAATTCAATGATGATATTCAAGCTCTTTTAGAATGTTACCCTAAGCTTCAATTCAAGACTATCTCTGATTTTCATAGTGAAGAGAAGCATCCTGGATTTGGAGAAAGGATAGGTGATGTAATTGTGTCACTGAGTTTGTATGGTAAGTCTTTTTTGAGAGATATAATTGTCTCTGAGAAAATAAGTTGCATTATTTTGGATGGAATATTTGGTGACCTTGCTACTGATTTGGCTGCTGAGTTTGGGATACAATTGATTCATTTTCGTACTATTAGTTCTTGTTGCTTTTGGGCTTATTTCTGTGTTCCAAACCTCTTGGAGTGCAATGAACTTCCCATTAGAGGTATATATATCCACTCTAAAATTGCTCTTAGAGATTGAATTAATTATTAGATTTCTTTGTCTTTTTAATATTCCATATTCTCTTGATTTTATTCTATATATATATAATTATATATGTACTCTGAAGTCGATGTTAATTTTAGATAGAATAATTGAGCAAAAAATGTTTTTTTCCGTACTAAAAAGTTTAAAGAAGAAATTTTATATCAAGAATTATGTATTTGGCCCATTGAAATTTTAAAAAACAATTTTTTTTACATAAATTATTTCCTTTTTTAATAGCATGACCCAAAAATGTATTACTCACTCATCACCACTTTTTTCACACCTGTATTCACAAGGTTTAGTATATACCATGAGGGAGTAGCTACAAACATGGACGGATATAACATAAGGTGTGGCTAGCAACAACAAATTTTGTCCAAATTATTTCTTACATGGGAAGAATATTTATAGAGTAGTGATATATGTACAACCATTTGTGACAACTTTGTTGACAACTTTCATTTTCTCTCTTCTCATTGGTCTAAAACAATAGAGAGAGAAAAAGGAAGAGAGAGAATATGGATATAATGTGAGTATGAGAGAGAAAGTTGTCAAAAAGTTGTAAGAAAGTGGTTGTACAAATATCATTTCTCATATTTATATAAGAATAAAATATTTGACGAAGATGCGGCTCATTTGCAAATAGCAATTGCTAGGATTATTATAAATAGATAGATAGATAGACTTGGATTAATGAAAGTAGTCCAAATAAAACTATTAAGCTATTTTTTTTTAGGGATATTAAGCTATTATTTTAGATGAAATAATATATAATCATTAATATTATTGGACAATTTTTTCGACACTATTATTTAAGCTACACCAAAAATTTAGTCATCGATCCGCCCCTGACCCGTTGTAGGTAATTATTTGCGCCCTATTTATTAAATGTTCACTCCATCACTTTTGTTTATCATTTATCTTACCTATTTTAAGAGGATAACAAGTTTTCTAAAAAAACTAGGGTCATGTTAACTTGTGCCCTAAGGGTACAAGTTAAGGAACTTAAAATAGAATTAAGTAATAAATTTTATGTTAAAAAGAAAACTTTTGAAACTTTCAAGACATTGAATGCACAATTTCCAAGAAAAAACTTCTACTTTTGGTTCCTTAACTTATGCCCCAAGAGCACAAGTTAACATTTCCCAAAAAACTATTAGGATGGAAAATATAAAGATTATTTAAAGTAAGATTAATGATTATTTTACAATTGATTTTCGAAGAGATTAATATTTCGACTCTATCAAAAACGTTTAGAACTTTTAGGTTGTGTCTGTCGTCCATTTAGGGAGCCAACCTTTTCATTTCACTAAATAGTTAGATCAATAATTTAACTTGTCTCTTGTTACTATTAAATTTTATTTCAAGTGTGTTTGTATACATGGACCGTCCATTTTGAACCTACTTTTCATTTCACTAAATAGTTAGATCAATAATTTAATTTGTCTCTTTTTTTTTTTGACAAGAATTTAATTTGTCTCTTGTTACTATTAAATTTTATTTCAAGTGTGTTTGTATACATGGACCGTCCATTTTGAACGAACAGTTCACATCTTAAGTTTATCCAAATTCAAAAATTGAACCATCTTATTAAAATCGCACGATCTAAATATGATGACTGCATGCAATCAAACTGCATTGATTCTAAAATCCATATACACACACTAGACCTTATTCACTTGGCATGTTTCTTTTAGATTTTTTTCTAACGCAACAAAATTGATTATCTATTTTATTTTATTTTTGTAATTGTAATTTGTGCACCTAATTATTTCGATACAAACACATTTTTATAAGTTGACTATTTGTTGAATTAATTTTTAGGAGACGAGGACATGGATCGCATCATAACAAACATTCCAGGTATGGCAAACTTACTTCGATGTAGAGATCTTCCAAGTTTTTGTCGAGAAAACAAAAAGAACCATATCCGTATAGACGAGGTTGTACTTCGAACCAAACAATCACTTAAAGCAAATGCACTCATACTCAACACATTTGAGGATCTAGAAGCCTCAGTCCTCTCACAAATTCGTATTCACTTCCCTAAACTCTACACCATAGGCCCTCTTCATCACCACCTCAATACCACAAAAAAATCATCATTTCCATCATCTTTTTTCTTTAAGAGCAATTTATTCAAAGTGGATAGAACCTGCATGGCGTGGCTTGACTCTCAACCATTGAAATCGGTTATATATGTTAGTTTTGGAAGCACTACACCAATGAAGAGAGAAGAAATAATTGAGATTTGGCATGGTTTATTGAATAGCAAAAAACAGTTTTTATGGGTGATTAGGTCAAACATGGTACAAGAAAAAGGATTATTAAGTGAGCTTGAGGAAGGAACTAGCAAGGGTAAAGGGTTGATTGTTGGATGGGTCCCACAAGAGGAAGTTTTGTCACATAAGGCAATTGGTGCTTTTTTGACACATAATGGGTGGAATTCAACTTTGGAAAGTGTGGTTTGTGGTGTGCCTATGATTTGTTGGCCTTATTTTGCTGATCAACAAATAAATAGTAGGTTTGTGAGTGAGGTTTGGAAACTTGGGTTGGATATGAAGGATGTTTGTGATAGGAAAGTTGTGGAGAATATGGTGAATGATGTTATGGTGAATAGGAATGAGGAGTTTGTAAAATCAGCCATGGATATGGCTAAGTTGGCATCCAAGAGTGTGAGTCCTGGTGGTTCCTCCTACAACAACTTCCAAGATTTAATTCAATATATAAGGTCTACTATCCCGTAA

Protein sequence

>MS.gene069129.t1

METQAKEKSSPHVLIFPCPAQGHVNSMLKLAELLAIQNIYITFLNTEYIHNRLIQFNDDIQALLECYPKLQFKTISDFHSEEKHPGFGERIGDVIVSLSLYGKSFLRDIIVSEKISCIILDGIFGDLATDLAAEFGIQLIHFRTISSCCFWAYFCVPNLLECNELPIRGDEDMDRIITNIPGMANLLRCRDLPSFCRENKKNHIRIDEVVLRTKQSLKANALILNTFEDLEASVLSQIRIHFPKLYTIGPLHHHLNTTKKSSFPSSFFFKSNLFKVDRTCMAWLDSQPLKSVIYVSFGSTTPMKREEIIEIWHGLLNSKKQFLWVIRSNMVQEKGLLSELEEGTSKGKGLIVGWVPQEEVLSHKAIGAFLTHNGWNSTLESVVCGVPMICWPYFADQQINSRFVSEVWKLGLDMKDVCDRKVVENMVNDVMVNRNEEFVKSAMDMAKLASKSVSPGGSSYNNFQDLIQYIRSTIP