Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073286.t1 | XP_003610095.1 | 95.9 | 172 | 7 | 0 | 1 | 172 | 1 | 172 | 2.50E-96 | 361.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073286.t1 | O64416 | 64.0 | 136 | 48 | 1 | 34 | 168 | 44 | 179 | 5.0e-53 | 208.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073286.t1 | G7JVD3 | 95.9 | 172 | 7 | 0 | 1 | 172 | 1 | 172 | 1.8e-96 | 361.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene073286 | -0.818134 | 2.30E-52 | -1.69E-46 |
| MS.gene049488 | MS.gene073286 | -0.811153 | 8.07E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene073286 | 0.802866 | 4.58E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene073286 | -0.806232 | 9.09E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene073286 | -0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene073286 | -0.812764 | 3.60E-51 | -1.69E-46 |
| MS.gene050971 | MS.gene073286 | -0.862446 | 5.04E-64 | -1.69E-46 |
| MS.gene051158 | MS.gene073286 | 0.805843 | 1.10E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene073286 | -0.80005 | 1.73E-48 | -1.69E-46 |
| MS.gene052128 | MS.gene073286 | 0.803784 | 2.96E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene073286 | -0.843302 | 1.52E-58 | -1.69E-46 |
| MS.gene052223 | MS.gene073286 | 0.801412 | 9.12E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene073286 | -0.809645 | 1.71E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene073286 | -0.806307 | 8.77E-50 | -1.69E-46 |
| MS.gene05233 | MS.gene073286 | 0.83842 | 2.91E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene073286 | -0.817877 | 2.63E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene073286 | -0.821715 | 3.48E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene073286 | -0.807804 | 4.23E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene073286 | -0.811711 | 6.11E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene073286 | -0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene073286 | -0.806114 | 9.63E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene073286 | 0.81578 | 7.76E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene073286 | -0.81131 | 7.46E-51 | -1.69E-46 |
| MS.gene054290 | MS.gene073286 | 0.817459 | 3.26E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene073286 | -0.838516 | 2.75E-57 | -1.69E-46 |
| MS.gene054742 | MS.gene073286 | 0.806117 | 9.61E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene073286 | -0.803158 | 3.98E-49 | -1.69E-46 |
| MS.gene055601 | MS.gene073286 | 0.830683 | 2.56E-55 | -1.69E-46 |
| MS.gene056330 | MS.gene073286 | 0.822167 | 2.74E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene073286 | -0.821562 | 3.78E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene073286 | -0.800803 | 1.21E-48 | -1.69E-46 |
| MS.gene056659 | MS.gene073286 | -0.824717 | 6.94E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene073286 | 0.852397 | 4.74E-61 | -1.69E-46 |
| MS.gene05702 | MS.gene073286 | -0.805618 | 1.22E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene073286 | -0.809868 | 1.53E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene073286 | -0.813 | 3.19E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene073286 | -0.822634 | 2.13E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene073286 | -0.80239 | 5.74E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene073286 | -0.814594 | 1.42E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene073286 | 0.845503 | 3.90E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene073286 | -0.862538 | 4.72E-64 | -1.69E-46 |
| MS.gene059043 | MS.gene073286 | 0.837968 | 3.80E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene073286 | -0.80756 | 4.76E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene073286 | -0.848952 | 4.42E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene073286 | -0.805885 | 1.08E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene073286 | 0.864692 | 1.01E-64 | -1.69E-46 |
| MS.gene059420 | MS.gene073286 | -0.813173 | 2.93E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene073286 | -0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene059807 | MS.gene073286 | -0.851138 | 1.08E-60 | -1.69E-46 |
| MS.gene060403 | MS.gene073286 | -0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene073286 | -0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene073286 | -0.809853 | 1.54E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene073286 | -0.809708 | 1.66E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073286.t1 | MTR_4g127870 | 95.930 | 172 | 7 | 0 | 1 | 172 | 1 | 172 | 3.80e-126 | 352 |
| MS.gene073286.t1 | MTR_6g018310 | 49.405 | 168 | 81 | 3 | 3 | 169 | 15 | 179 | 1.02e-60 | 186 |
| MS.gene073286.t1 | MTR_6g018300 | 50.610 | 164 | 77 | 3 | 7 | 169 | 16 | 176 | 1.03e-60 | 186 |
| MS.gene073286.t1 | MTR_7g007120 | 50.641 | 156 | 73 | 3 | 15 | 169 | 28 | 180 | 6.68e-58 | 179 |
| MS.gene073286.t1 | MTR_7g007120 | 51.299 | 154 | 71 | 3 | 15 | 167 | 28 | 178 | 9.89e-58 | 179 |
| MS.gene073286.t1 | MTR_7g007120 | 51.299 | 154 | 71 | 3 | 15 | 167 | 28 | 178 | 1.12e-57 | 179 |
| MS.gene073286.t1 | MTR_7g007220 | 51.299 | 154 | 71 | 3 | 15 | 167 | 28 | 178 | 1.13e-57 | 179 |
| MS.gene073286.t1 | MTR_7g007200 | 51.299 | 154 | 71 | 3 | 15 | 167 | 28 | 178 | 1.51e-57 | 178 |
| MS.gene073286.t1 | MTR_7g007230 | 50.649 | 154 | 72 | 3 | 15 | 167 | 28 | 178 | 1.29e-56 | 176 |
| MS.gene073286.t1 | MTR_7g007210 | 52.143 | 140 | 63 | 3 | 15 | 153 | 28 | 164 | 9.86e-52 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073286.t1 | AT1G67090 | 49.432 | 176 | 82 | 3 | 1 | 171 | 6 | 179 | 6.57e-62 | 189 |
| MS.gene073286.t1 | AT5G38420 | 52.121 | 165 | 75 | 3 | 8 | 171 | 18 | 179 | 4.16e-61 | 187 |
| MS.gene073286.t1 | AT5G38410 | 51.515 | 165 | 76 | 3 | 8 | 171 | 18 | 179 | 4.35e-61 | 187 |
| MS.gene073286.t1 | AT5G38430 | 51.515 | 165 | 76 | 3 | 8 | 171 | 18 | 179 | 1.48e-60 | 186 |
| MS.gene073286.t1 | AT5G38430 | 51.515 | 165 | 76 | 3 | 8 | 171 | 18 | 179 | 1.48e-60 | 186 |
| MS.gene073286.t1 | AT5G38410 | 49.412 | 170 | 77 | 3 | 8 | 171 | 18 | 184 | 1.54e-59 | 184 |
| MS.gene073286.t1 | AT5G38410 | 50.610 | 164 | 72 | 4 | 8 | 171 | 18 | 172 | 1.95e-57 | 178 |
| MS.gene073286.t1 | AT1G67090 | 39.130 | 115 | 64 | 2 | 1 | 111 | 6 | 118 | 3.25e-22 | 87.0 |
Find 44 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTTCCTATTATTAA+TGG | 0.204312 | 8.1:-4932258 | None:intergenic |
| GCAGCTTCAGTTGCTGGGCC+TGG | 0.282618 | 8.1:+4931975 | MS.gene073286:CDS |
| ATCAGAAAGGGGTGGTAAAT+AGG | 0.291264 | 8.1:-4932288 | None:intergenic |
| ATGGGAGGTATTGGACATTA+TGG | 0.311655 | 8.1:+4932944 | MS.gene073286:CDS |
| TCAAATTTCCTATTATTAAT+GGG | 0.315443 | 8.1:-4932257 | None:intergenic |
| CATGGAATCCCATTAATAAT+AGG | 0.318513 | 8.1:+4932249 | MS.gene073286:CDS |
| GTTGCTGGGCCTGGCCTTGT+GGG | 0.329334 | 8.1:+4931984 | MS.gene073286:CDS |
| AGTCCAACTCATCAAATCTT+TGG | 0.338452 | 8.1:+4932012 | MS.gene073286:CDS |
| ACATTTGCAGCTTCAGTTGC+TGG | 0.348801 | 8.1:+4931969 | MS.gene073286:CDS |
| AAGCATCTTATATATGCATT+TGG | 0.378298 | 8.1:-4933039 | None:intergenic |
| TAAGTAGTTGTTGTGGTAGT+AGG | 0.382906 | 8.1:-4933114 | None:intergenic |
| TTCAATGGAATAAGTAGTAC+TGG | 0.385537 | 8.1:-4932036 | None:intergenic |
| CATTTGCAGCTTCAGTTGCT+GGG | 0.394890 | 8.1:+4931970 | MS.gene073286:CDS |
| GATACTATGATGGGAGGTAT+TGG | 0.398812 | 8.1:+4932935 | MS.gene073286:CDS |
| GTACTACTTATTCCATTGAA+TGG | 0.406489 | 8.1:+4932039 | MS.gene073286:CDS |
| GACTTCAAGCCCACAAGGCC+AGG | 0.408478 | 8.1:-4931993 | None:intergenic |
| TTATGGAAGCTACCAATGTT+TGG | 0.409185 | 8.1:+4932961 | MS.gene073286:CDS |
| AGTTGCTGGGCCTGGCCTTG+TGG | 0.426737 | 8.1:+4931983 | MS.gene073286:CDS |
| TGCAATTGAGTCATCAGAAA+GGG | 0.441885 | 8.1:-4932300 | None:intergenic |
| GACTAACCTCATCAAATTCA+AGG | 0.447817 | 8.1:-4932364 | None:intergenic |
| CATCATAGTATCCTGGCATC+TGG | 0.482846 | 8.1:-4932924 | None:intergenic |
| GCAGTGAATCTTAGAACCAT+TGG | 0.489711 | 8.1:-4932078 | None:intergenic |
| CAGATGCCAGGATACTATGA+TGG | 0.514747 | 8.1:+4932925 | MS.gene073286:CDS |
| GGGCCAAAGATTTGATGAGT+TGG | 0.537281 | 8.1:-4932015 | None:intergenic |
| GATTGACTACATGCTCAAGA+AGG | 0.539499 | 8.1:+4932328 | MS.gene073286:CDS |
| TACCTCCCATCATAGTATCC+TGG | 0.541106 | 8.1:-4932931 | None:intergenic |
| TTCTGATGACTCAATTGCAA+AGG | 0.545642 | 8.1:+4932304 | MS.gene073286:CDS |
| TTTGTGAATAATAAAAGCCA+TGG | 0.556871 | 8.1:-4933091 | None:intergenic |
| TTCTAAGATTCACTGCATGA+AGG | 0.557279 | 8.1:+4932085 | MS.gene073286:CDS |
| TTGCAATTGAGTCATCAGAA+AGG | 0.572127 | 8.1:-4932301 | None:intergenic |
| AGAGCAAATAGCCAGATGCC+AGG | 0.574689 | 8.1:+4932913 | MS.gene073286:CDS |
| ACCTCATCAAATTCAAGGCA+AGG | 0.584505 | 8.1:-4932359 | None:intergenic |
| AGATGCCAGGATACTATGAT+GGG | 0.593649 | 8.1:+4932926 | MS.gene073286:CDS |
| CAAGCGACACATGCAAGCCA+TGG | 0.600771 | 8.1:+4933074 | MS.gene073286:CDS |
| ATTGACTACATGCTCAAGAA+GGG | 0.603348 | 8.1:+4932329 | MS.gene073286:CDS |
| ACCTTGCCTTGAATTTGATG+AGG | 0.604745 | 8.1:+4932358 | MS.gene073286:CDS |
| ACTACATGCTCAAGAAGGGA+TGG | 0.608538 | 8.1:+4932333 | MS.gene073286:CDS |
| AGTTGGACTTCAAGCCCACA+AGG | 0.611785 | 8.1:-4931998 | None:intergenic |
| AATTAATTAAGTAGTTGTTG+TGG | 0.614403 | 8.1:-4933121 | None:intergenic |
| GCAATTGAGTCATCAGAAAG+GGG | 0.629169 | 8.1:-4932299 | None:intergenic |
| TCAATGGAATAAGTAGTACT+GGG | 0.635347 | 8.1:-4932035 | None:intergenic |
| TGCCAGGATACTATGATGGG+AGG | 0.662604 | 8.1:+4932929 | MS.gene073286:CDS |
| GAGTCGTTACAACCAAACAT+TGG | 0.684048 | 8.1:-4932973 | None:intergenic |
| ATTGAGTCATCAGAAAGGGG+TGG | 0.697277 | 8.1:-4932296 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATATCTTATTAATAATA+TGG | + | chr8.1:4932850-4932869 | MS.gene073286:intron | 10.0% |
| !! | TTATATTATAAACTAGATTT+AGG | - | chr8.1:4932393-4932412 | None:intergenic | 10.0% |
| !!! | TAAATCTAGTTTATAATATA+AGG | + | chr8.1:4932392-4932411 | MS.gene073286:intron | 10.0% |
| !! | GATTCATATAATATAGATTA+AGG | + | chr8.1:4932482-4932501 | MS.gene073286:intron | 15.0% |
| !! | TCAAATTTCCTATTATTAAT+GGG | - | chr8.1:4932260-4932279 | None:intergenic | 15.0% |
| !! | TTCAAATTTCCTATTATTAA+TGG | - | chr8.1:4932261-4932280 | None:intergenic | 15.0% |
| !!! | AAGTTATACAAAAGTTTTAT+TGG | - | chr8.1:4932768-4932787 | None:intergenic | 15.0% |
| !! | ATTATAAACTAGATTTAGGT+TGG | - | chr8.1:4932389-4932408 | None:intergenic | 20.0% |
| !! | ATTATAAGGAAAAAACAACT+AGG | + | chr8.1:4932429-4932448 | MS.gene073286:intron | 20.0% |
| !! | TAGAAAACAAAAACATCAAA+AGG | - | chr8.1:4932825-4932844 | None:intergenic | 20.0% |
| !!! | CTTTAATTTATTCTATGAAG+TGG | + | chr8.1:4932785-4932804 | MS.gene073286:intron | 20.0% |
| ! | AAAAAGAAAAAGACCAAGAT+GGG | - | chr8.1:4932174-4932193 | None:intergenic | 25.0% |
| ! | AACCATGCTATCATAATATA+TGG | - | chr8.1:4932132-4932151 | None:intergenic | 25.0% |
| ! | AAGCATCTTATATATGCATT+TGG | - | chr8.1:4933042-4933061 | None:intergenic | 25.0% |
| ! | AATATGGAACTTGTATTGTT+TGG | + | chr8.1:4932866-4932885 | MS.gene073286:intron | 25.0% |
| ! | ATATAGATTAAGGCAATGTT+TGG | + | chr8.1:4932492-4932511 | MS.gene073286:intron | 25.0% |
| ! | TTTGTAACTTAAAACAGACA+TGG | + | chr8.1:4932231-4932250 | MS.gene073286:intron | 25.0% |
| ! | TTTGTGAATAATAAAAGCCA+TGG | - | chr8.1:4933094-4933113 | None:intergenic | 25.0% |
| AGCCATATATTATGATAGCA+TGG | + | chr8.1:4932127-4932146 | MS.gene073286:intron | 30.0% | |
| ATTGTTTGGAAATGGAAGTT+TGG | + | chr8.1:4932880-4932899 | MS.gene073286:intron | 30.0% | |
| CATGGAATCCCATTAATAAT+AGG | + | chr8.1:4932249-4932268 | MS.gene073286:CDS | 30.0% | |
| GAAAAAGAAAAAGACCAAGA+TGG | - | chr8.1:4932175-4932194 | None:intergenic | 30.0% | |
| GAACTTGTATTGTTTGGAAA+TGG | + | chr8.1:4932872-4932891 | MS.gene073286:intron | 30.0% | |
| GTACTACTTATTCCATTGAA+TGG | + | chr8.1:4932039-4932058 | MS.gene073286:CDS | 30.0% | |
| TCAATGGAATAAGTAGTACT+GGG | - | chr8.1:4932038-4932057 | None:intergenic | 30.0% | |
| TTCAATGGAATAAGTAGTAC+TGG | - | chr8.1:4932039-4932058 | None:intergenic | 30.0% | |
| ! | AGTCTTCTTTTTCCATTCAA+TGG | - | chr8.1:4932054-4932073 | None:intergenic | 30.0% |
| AAAAAGAAGACTGTCTCCAA+TGG | + | chr8.1:4932062-4932081 | MS.gene073286:CDS | 35.0% | |
| AGTCCAACTCATCAAATCTT+TGG | + | chr8.1:4932012-4932031 | MS.gene073286:CDS | 35.0% | |
| ATTGACTACATGCTCAAGAA+GGG | + | chr8.1:4932329-4932348 | MS.gene073286:CDS | 35.0% | |
| GACTAACCTCATCAAATTCA+AGG | - | chr8.1:4932367-4932386 | None:intergenic | 35.0% | |
| TAAGTAGTTGTTGTGGTAGT+AGG | - | chr8.1:4933117-4933136 | None:intergenic | 35.0% | |
| TGCAATTGAGTCATCAGAAA+GGG | - | chr8.1:4932303-4932322 | None:intergenic | 35.0% | |
| TTATGGAAGCTACCAATGTT+TGG | + | chr8.1:4932961-4932980 | MS.gene073286:CDS | 35.0% | |
| TTCTGATGACTCAATTGCAA+AGG | + | chr8.1:4932304-4932323 | MS.gene073286:CDS | 35.0% | |
| TTGCAATTGAGTCATCAGAA+AGG | - | chr8.1:4932304-4932323 | None:intergenic | 35.0% | |
| !! | TTCTAAGATTCACTGCATGA+AGG | + | chr8.1:4932085-4932104 | MS.gene073286:CDS | 35.0% |
| ACCTCATCAAATTCAAGGCA+AGG | - | chr8.1:4932362-4932381 | None:intergenic | 40.0% | |
| ACCTTGCCTTGAATTTGATG+AGG | + | chr8.1:4932358-4932377 | MS.gene073286:CDS | 40.0% | |
| AGATGCCAGGATACTATGAT+GGG | + | chr8.1:4932926-4932945 | MS.gene073286:CDS | 40.0% | |
| ATCAGAAAGGGGTGGTAAAT+AGG | - | chr8.1:4932291-4932310 | None:intergenic | 40.0% | |
| ATGTACTAGTACTCCCATCT+TGG | + | chr8.1:4932158-4932177 | MS.gene073286:intron | 40.0% | |
| GAGTCGTTACAACCAAACAT+TGG | - | chr8.1:4932976-4932995 | None:intergenic | 40.0% | |
| GATTGACTACATGCTCAAGA+AGG | + | chr8.1:4932328-4932347 | MS.gene073286:CDS | 40.0% | |
| GCAATTGAGTCATCAGAAAG+GGG | - | chr8.1:4932302-4932321 | None:intergenic | 40.0% | |
| GCAGTGAATCTTAGAACCAT+TGG | - | chr8.1:4932081-4932100 | None:intergenic | 40.0% | |
| ! | GATACTATGATGGGAGGTAT+TGG | + | chr8.1:4932935-4932954 | MS.gene073286:CDS | 40.0% |
| !! | ATGGGAGGTATTGGACATTA+TGG | + | chr8.1:4932944-4932963 | MS.gene073286:CDS | 40.0% |
| ACATTTGCAGCTTCAGTTGC+TGG | + | chr8.1:4931969-4931988 | MS.gene073286:CDS | 45.0% | |
| ACTACATGCTCAAGAAGGGA+TGG | + | chr8.1:4932333-4932352 | MS.gene073286:CDS | 45.0% | |
| ATTGAGTCATCAGAAAGGGG+TGG | - | chr8.1:4932299-4932318 | None:intergenic | 45.0% | |
| CAGATGCCAGGATACTATGA+TGG | + | chr8.1:4932925-4932944 | MS.gene073286:CDS | 45.0% | |
| CATCATAGTATCCTGGCATC+TGG | - | chr8.1:4932927-4932946 | None:intergenic | 45.0% | |
| CATTTGCAGCTTCAGTTGCT+GGG | + | chr8.1:4931970-4931989 | MS.gene073286:CDS | 45.0% | |
| GGGCCAAAGATTTGATGAGT+TGG | - | chr8.1:4932018-4932037 | None:intergenic | 45.0% | |
| TACCTCCCATCATAGTATCC+TGG | - | chr8.1:4932934-4932953 | None:intergenic | 45.0% | |
| !!! | TAGTTTTTTTTATTATTATA+AGG | + | chr8.1:4932415-4932434 | MS.gene073286:intron | 5.0% |
| AGAGCAAATAGCCAGATGCC+AGG | + | chr8.1:4932913-4932932 | MS.gene073286:CDS | 50.0% | |
| AGTTGGACTTCAAGCCCACA+AGG | - | chr8.1:4932001-4932020 | None:intergenic | 50.0% | |
| ! | TGCCAGGATACTATGATGGG+AGG | + | chr8.1:4932929-4932948 | MS.gene073286:CDS | 50.0% |
| CAAGCGACACATGCAAGCCA+TGG | + | chr8.1:4933074-4933093 | MS.gene073286:CDS | 55.0% | |
| GACTTCAAGCCCACAAGGCC+AGG | - | chr8.1:4931996-4932015 | None:intergenic | 60.0% | |
| GCAGCTTCAGTTGCTGGGCC+TGG | + | chr8.1:4931975-4931994 | MS.gene073286:CDS | 65.0% | |
| !! | AGTTGCTGGGCCTGGCCTTG+TGG | + | chr8.1:4931983-4932002 | MS.gene073286:CDS | 65.0% |
| !! | GTTGCTGGGCCTGGCCTTGT+GGG | + | chr8.1:4931984-4932003 | MS.gene073286:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4931957 | 4933137 | 4931957 | ID=MS.gene073286 |
| chr8.1 | mRNA | 4931957 | 4933137 | 4931957 | ID=MS.gene073286.t1;Parent=MS.gene073286 |
| chr8.1 | exon | 4931957 | 4932106 | 4931957 | ID=MS.gene073286.t1.exon1;Parent=MS.gene073286.t1 |
| chr8.1 | CDS | 4931957 | 4932106 | 4931957 | ID=cds.MS.gene073286.t1;Parent=MS.gene073286.t1 |
| chr8.1 | exon | 4932248 | 4932379 | 4932248 | ID=MS.gene073286.t1.exon2;Parent=MS.gene073286.t1 |
| chr8.1 | CDS | 4932248 | 4932379 | 4932248 | ID=cds.MS.gene073286.t1;Parent=MS.gene073286.t1 |
| chr8.1 | exon | 4932898 | 4933137 | 4932898 | ID=MS.gene073286.t1.exon3;Parent=MS.gene073286.t1 |
| chr8.1 | CDS | 4932898 | 4933137 | 4932898 | ID=cds.MS.gene073286.t1;Parent=MS.gene073286.t1 |
| Gene Sequence |
| Protein sequence |
