AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073515

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073515.t1 MTR_4g021520 84.926 471 70 1 1 471 1 470 0.0 828
MS.gene073515.t1 MTR_4g021490 83.652 471 76 1 1 471 1 470 0.0 810
MS.gene073515.t1 MTR_4g021500 83.015 471 79 1 1 471 1 470 0.0 806
MS.gene073515.t1 MTR_4g021500 77.506 449 100 1 23 471 458 905 0.0 718
MS.gene073515.t1 MTR_4g021500 83.015 471 79 1 1 471 1 470 0.0 806
MS.gene073515.t1 MTR_4g021500 75.278 449 92 2 23 471 458 887 0.0 684
MS.gene073515.t1 MTR_4g021535 82.051 468 82 2 4 471 1 466 0.0 803
MS.gene073515.t1 MTR_4g021530 80.255 471 92 1 1 471 1 470 0.0 792
MS.gene073515.t1 MTR_4g021510 83.857 446 72 0 26 471 24 469 0.0 785
MS.gene073515.t1 MTR_4g021520 83.916 429 68 1 1 429 1 428 0.0 741
MS.gene073515.t1 MTR_4g021535 72.863 468 78 3 4 471 1 419 0.0 694
MS.gene073515.t1 MTR_2g018590 60.304 461 175 5 18 471 10 469 0.0 580
MS.gene073515.t1 MTR_3g100420 60.171 467 171 6 20 471 30 496 0.0 578
MS.gene073515.t1 MTR_2g018600 59.465 449 175 5 29 471 22 469 0.0 550
MS.gene073515.t1 MTR_2g018630 60.356 449 164 7 29 471 25 465 0.0 548
MS.gene073515.t1 MTR_2g018630 59.290 366 136 6 112 471 2 360 8.84e-152 436
MS.gene073515.t1 MTR_3g045770 38.913 460 259 9 15 467 6 450 3.45e-116 349
MS.gene073515.t1 MTR_8g011350 37.675 499 269 10 10 471 2 495 2.53e-115 348
MS.gene073515.t1 MTR_7g051430 36.943 471 256 9 39 471 28 495 1.59e-110 336
MS.gene073515.t1 MTR_7g080180 36.016 497 260 12 19 466 6 493 1.13e-109 333
MS.gene073515.t1 MTR_2g009200 38.248 468 240 10 16 471 9 439 4.77e-105 320
MS.gene073515.t1 MTR_8g011350 37.712 472 252 10 10 444 2 468 9.97e-105 320
MS.gene073515.t1 MTR_7g080180 34.783 460 242 12 19 429 6 456 1.47e-92 288
MS.gene073515.t1 MTR_7g051430 33.590 390 218 9 39 390 28 414 2.68e-71 232
MS.gene073515.t1 MTR_4g075150 30.172 464 297 14 19 471 13 460 1.12e-56 195
MS.gene073515.t1 MTR_4g075150 29.654 462 304 14 19 471 13 462 2.58e-56 194
MS.gene073515.t1 MTR_2g062990 30.947 433 270 14 44 466 43 456 5.78e-55 191
MS.gene073515.t1 MTR_2g062980 31.409 433 268 14 44 466 43 456 6.02e-55 191
MS.gene073515.t1 MTR_2g063000 30.892 437 269 16 44 467 42 458 8.49e-55 190
MS.gene073515.t1 MTR_2g081620 30.303 462 285 17 17 467 23 458 1.86e-53 186
MS.gene073515.t1 MTR_1g095560 30.297 472 294 16 12 468 1 452 1.00e-52 184
MS.gene073515.t1 MTR_2g012850 30.612 441 274 17 41 466 36 459 1.43e-52 184
MS.gene073515.t1 MTR_2g012860 29.778 450 284 15 38 471 39 472 1.70e-52 184
MS.gene073515.t1 MTR_3g034290 29.025 441 279 15 40 471 74 489 2.67e-52 184
MS.gene073515.t1 MTR_3g498755 28.855 454 284 13 37 471 11 444 1.37e-51 181
MS.gene073515.t1 MTR_1g095540 28.970 466 298 15 16 468 7 452 1.48e-51 181
MS.gene073515.t1 MTR_0003s0560 31.027 448 259 18 40 471 73 486 3.16e-51 181
MS.gene073515.t1 MTR_3g434850 27.731 476 299 14 13 471 6 453 3.33e-51 180
MS.gene073515.t1 MTR_1g021010 30.222 450 272 19 28 466 62 480 3.63e-51 181
MS.gene073515.t1 MTR_8g099930 30.044 456 280 16 34 471 27 461 5.93e-51 179
MS.gene073515.t1 MTR_3g090150 28.480 467 295 19 19 466 11 457 5.04e-50 177
MS.gene073515.t1 MTR_3g090130 29.571 443 274 16 41 466 29 450 6.72e-50 177
MS.gene073515.t1 MTR_2g449850 28.726 463 271 16 29 466 28 456 1.07e-49 176
MS.gene073515.t1 MTR_4g089155 30.000 440 280 16 41 466 54 479 1.18e-49 177
MS.gene073515.t1 MTR_7g013790 29.087 471 296 19 19 471 13 463 1.47e-49 176
MS.gene073515.t1 MTR_3g079560 29.519 437 269 15 40 466 77 484 1.85e-49 176
MS.gene073515.t1 MTR_7g021130 27.119 472 307 13 16 471 6 456 2.72e-48 172
MS.gene073515.t1 MTR_1g040370 29.213 445 242 14 40 471 30 414 6.55e-48 170
MS.gene073515.t1 MTR_1g020090 29.630 432 270 13 40 466 89 491 9.05e-48 172
MS.gene073515.t1 MTR_4g122950 27.708 480 301 17 17 467 10 472 2.73e-47 170
MS.gene073515.t1 MTR_3g079570 28.966 435 273 14 40 466 78 484 2.89e-47 170
MS.gene073515.t1 MTR_3g079590 29.452 438 268 16 40 466 77 484 4.86e-47 170
MS.gene073515.t1 MTR_4g122960 28.008 482 295 18 17 467 10 470 9.36e-47 169
MS.gene073515.t1 MTR_1g095560 28.770 504 292 19 12 468 1 484 2.44e-46 168
MS.gene073515.t1 MTR_5g072570 27.902 448 281 18 41 467 30 456 6.17e-46 166
MS.gene073515.t1 MTR_1g021020 27.517 447 287 15 28 466 64 481 2.96e-45 165
MS.gene073515.t1 MTR_2g063000 29.493 434 248 17 44 467 42 427 4.02e-45 163
MS.gene073515.t1 MTR_3g079600 28.995 438 273 16 40 466 75 485 7.70e-45 164
MS.gene073515.t1 MTR_3g079620 28.188 447 270 19 40 466 77 492 6.68e-41 153
MS.gene073515.t1 MTR_3g079630 28.062 449 272 17 38 466 75 492 1.21e-40 152
MS.gene073515.t1 MTR_4g057600 28.049 410 253 12 70 466 109 489 1.62e-40 152
MS.gene073515.t1 MTR_2g095750 26.847 406 264 12 70 466 114 495 2.62e-38 146
MS.gene073515.t1 MTR_4g057585 27.316 421 267 12 57 466 98 490 4.21e-38 145
MS.gene073515.t1 MTR_4g057570 29.384 422 238 18 70 467 103 488 7.25e-38 144
MS.gene073515.t1 MTR_4g057595 27.451 408 258 11 70 466 111 491 1.31e-37 144
MS.gene073515.t1 MTR_1g050545 27.941 408 255 15 70 465 97 477 1.01e-36 141
MS.gene073515.t1 MTR_1g102130 27.133 457 250 19 40 471 91 489 3.52e-35 137
MS.gene073515.t1 MTR_1g094155 27.845 413 248 17 70 465 104 483 1.66e-32 129
MS.gene073515.t1 MTR_5g097180 24.773 440 274 14 47 466 30 432 8.66e-32 127
MS.gene073515.t1 MTR_2g095730 25.059 423 253 16 70 466 108 492 5.72e-31 125
MS.gene073515.t1 MTR_3g034290 28.875 329 202 14 40 361 74 377 2.28e-30 122
MS.gene073515.t1 MTR_2g018650 48.031 127 43 3 320 435 8 122 3.68e-28 108
MS.gene073515.t1 MTR_0003s0560 31.461 267 164 11 40 300 73 326 3.59e-27 112
MS.gene073515.t1 MTR_4g084710 25.169 445 243 18 57 466 45 434 1.89e-25 108
MS.gene073515.t1 MTR_2g095710 22.850 407 269 14 71 466 106 478 2.33e-21 97.1
MS.gene073515.t1 MTR_0075s0010 25.066 379 202 14 40 410 7 311 4.44e-16 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073515.t1 AT5G09640 52.903 465 201 10 20 471 6 465 5.83e-169 484
MS.gene073515.t1 AT2G22970 53.499 443 178 5 32 471 16 433 1.31e-165 474
MS.gene073515.t1 AT2G23000 52.596 443 187 7 31 471 16 437 9.49e-164 469
MS.gene073515.t1 AT2G23000 52.596 443 187 7 31 471 16 437 9.49e-164 469
MS.gene073515.t1 AT2G22980 52.477 444 177 9 32 471 17 430 5.92e-163 467
MS.gene073515.t1 AT2G23010 51.648 455 198 6 19 471 3 437 2.45e-162 466
MS.gene073515.t1 AT2G22920 53.725 443 175 8 30 467 14 431 2.57e-162 466
MS.gene073515.t1 AT2G23010 51.648 455 198 6 19 471 3 437 2.76e-162 466
MS.gene073515.t1 AT1G33540 51.927 441 203 7 38 471 26 464 1.18e-160 463
MS.gene073515.t1 AT3G12203 52.403 437 179 7 38 471 6 416 3.62e-159 457
MS.gene073515.t1 AT3G12203 50.763 459 197 7 16 471 5 437 6.33e-159 457
MS.gene073515.t1 AT2G22990 49.660 441 197 7 33 471 16 433 1.34e-157 454
MS.gene073515.t1 AT1G73270 52.262 442 182 8 33 471 26 441 5.99e-157 452
MS.gene073515.t1 AT1G73270 52.262 442 182 8 33 471 26 441 6.08e-157 453
MS.gene073515.t1 AT3G10450 51.030 437 186 7 38 471 26 437 9.01e-157 452
MS.gene073515.t1 AT1G73300 50.562 445 185 9 33 471 26 441 7.42e-156 450
MS.gene073515.t1 AT1G73300 50.562 445 185 9 33 471 26 441 7.42e-156 450
MS.gene073515.t1 AT1G73280 48.899 454 204 6 21 471 13 441 6.77e-155 447
MS.gene073515.t1 AT2G22970 53.237 417 168 4 33 446 17 409 7.82e-155 446
MS.gene073515.t1 AT2G22970 52.983 419 170 4 32 447 16 410 1.42e-154 446
MS.gene073515.t1 AT1G73290 51.242 443 183 9 33 471 25 438 7.82e-154 444
MS.gene073515.t1 AT5G36180 50.787 445 184 9 33 471 26 441 7.85e-154 444
MS.gene073515.t1 AT3G12240 50.688 436 187 7 39 471 26 436 2.59e-153 443
MS.gene073515.t1 AT1G73310 50.679 442 189 7 33 471 26 441 1.35e-152 441
MS.gene073515.t1 AT2G22980 51.790 419 169 8 32 446 17 406 1.26e-151 438
MS.gene073515.t1 AT2G22990 48.753 441 192 8 33 471 16 424 2.84e-151 437
MS.gene073515.t1 AT1G33540 51.429 420 195 7 59 471 4 421 4.42e-151 437
MS.gene073515.t1 AT2G22980 51.675 418 169 8 32 445 17 405 1.26e-150 436
MS.gene073515.t1 AT3G12230 49.771 436 191 7 39 471 25 435 2.19e-150 436
MS.gene073515.t1 AT3G12220 50.926 432 184 7 39 467 25 431 2.01e-149 433
MS.gene073515.t1 AT2G22990 48.687 419 191 6 33 449 16 412 3.92e-146 426
MS.gene073515.t1 AT2G22990 48.675 415 189 6 33 445 16 408 1.82e-145 422
MS.gene073515.t1 AT3G10450 50.243 412 178 6 38 446 26 413 1.25e-144 420
MS.gene073515.t1 AT3G10450 49.760 416 181 7 59 471 4 394 1.48e-144 419
MS.gene073515.t1 AT3G12203 50.990 404 170 6 71 471 1 379 1.91e-141 410
MS.gene073515.t1 AT2G22920 51.478 406 168 7 30 430 14 395 5.04e-140 408
MS.gene073515.t1 AT3G12220 49.757 412 179 7 59 467 15 401 2.59e-137 401
MS.gene073515.t1 AT1G73290 50.249 402 168 8 33 430 25 398 4.69e-134 393
MS.gene073515.t1 AT1G73310 49.383 405 177 6 33 434 26 405 5.74e-134 394
MS.gene073515.t1 AT3G10450 48.849 391 173 6 59 446 4 370 3.02e-132 387
MS.gene073515.t1 AT5G36180 49.307 361 150 7 117 471 6 339 1.66e-114 340
MS.gene073515.t1 AT5G36180 49.307 361 150 7 117 471 6 339 1.66e-114 340
MS.gene073515.t1 AT1G73280 48.045 358 159 5 117 471 6 339 8.53e-114 338
MS.gene073515.t1 AT2G22980 48.767 365 152 9 32 390 17 352 4.63e-113 337
MS.gene073515.t1 AT2G22990 47.941 340 154 5 134 471 1 319 6.29e-112 333
MS.gene073515.t1 AT2G22990 47.941 340 154 5 134 471 1 319 6.86e-112 333
MS.gene073515.t1 AT1G73280 45.845 373 175 5 21 390 13 361 2.22e-110 331
MS.gene073515.t1 AT4G12910 35.918 490 265 10 18 466 11 492 1.08e-107 328
MS.gene073515.t1 AT2G22970 50.311 322 135 3 32 352 16 313 3.13e-106 318
MS.gene073515.t1 AT1G73280 47.633 338 150 5 137 471 1 314 7.57e-106 317
MS.gene073515.t1 AT5G36180 48.094 341 145 6 112 446 1 315 4.55e-105 316
MS.gene073515.t1 AT2G22920 50.154 325 136 5 30 352 14 314 7.92e-104 312
MS.gene073515.t1 AT2G22980 48.896 317 130 7 134 446 1 289 2.14e-101 305
MS.gene073515.t1 AT3G25420 36.422 464 255 11 41 467 30 490 6.68e-101 311
MS.gene073515.t1 AT5G36180 46.605 324 141 6 112 429 1 298 3.05e-93 286
MS.gene073515.t1 AT1G73310 45.538 325 151 4 113 434 2 303 7.42e-92 282
MS.gene073515.t1 AT2G22920 52.555 274 102 6 198 467 3 252 1.78e-91 278
MS.gene073515.t1 AT1G73290 52.222 270 117 6 33 297 25 287 1.87e-91 280
MS.gene073515.t1 AT4G12910 35.099 453 245 10 18 429 11 455 2.18e-91 285
MS.gene073515.t1 AT3G12220 52.893 242 107 4 39 278 25 261 1.05e-80 255
MS.gene073515.t1 AT3G12220 54.676 139 61 2 330 467 242 379 4.55e-44 159
MS.gene073515.t1 AT4G30810 31.423 471 291 14 15 471 9 461 2.02e-62 211
MS.gene073515.t1 AT5G08260 30.505 495 288 17 10 471 4 475 8.48e-61 206
MS.gene073515.t1 AT3G52000 30.905 453 253 17 41 471 64 478 4.73e-59 202
MS.gene073515.t1 AT4G15100 30.787 445 285 13 41 471 45 480 1.31e-58 201
MS.gene073515.t1 AT3G52010 29.437 462 288 12 24 471 46 483 4.12e-58 199
MS.gene073515.t1 AT3G52020 31.757 444 264 13 41 471 80 497 5.17e-58 199
MS.gene073515.t1 AT2G22960 61.151 139 52 2 334 471 47 184 3.00e-57 187
MS.gene073515.t1 AT2G05850 30.201 447 269 16 41 471 64 483 4.99e-55 191
MS.gene073515.t1 AT5G23210 28.810 479 289 15 24 471 37 494 3.45e-54 189
MS.gene073515.t1 AT1G61130 29.590 463 289 14 25 470 16 458 1.32e-53 187
MS.gene073515.t1 AT4G30610 30.045 446 282 17 40 471 32 461 2.73e-53 186
MS.gene073515.t1 AT3G17180 30.323 465 278 17 33 471 30 474 7.95e-53 185
MS.gene073515.t1 AT3G07990 29.571 443 282 14 40 471 33 456 6.06e-52 182
MS.gene073515.t1 AT3G63470 29.025 441 277 15 41 471 82 496 1.71e-51 182
MS.gene073515.t1 AT2G35780 29.412 442 282 16 40 471 29 450 2.32e-51 181
MS.gene073515.t1 AT3G02110 30.501 459 277 19 35 471 32 470 3.51e-51 181
MS.gene073515.t1 AT1G11080 30.396 454 275 15 41 470 51 487 1.17e-50 179
MS.gene073515.t1 AT1G11080 30.396 454 275 15 41 470 51 487 1.81e-50 179
MS.gene073515.t1 AT2G12480 27.623 467 298 16 19 467 8 452 1.23e-48 174
MS.gene073515.t1 AT1G43780 30.134 448 270 19 41 466 38 464 1.43e-48 174
MS.gene073515.t1 AT2G24010 29.545 440 281 15 41 471 31 450 1.50e-48 173
MS.gene073515.t1 AT2G33530 29.158 463 279 18 32 471 25 461 8.02e-48 171
MS.gene073515.t1 AT2G35770 28.511 470 301 16 12 468 7 454 1.13e-47 171
MS.gene073515.t1 AT2G24000 27.397 438 297 11 40 467 30 456 5.48e-47 169
MS.gene073515.t1 AT1G28110 27.876 452 287 13 37 471 28 457 1.37e-46 168
MS.gene073515.t1 AT1G28110 27.876 452 287 13 37 471 28 457 1.37e-46 168
MS.gene073515.t1 AT2G12480 26.724 464 282 15 19 467 8 428 3.35e-44 161
MS.gene073515.t1 AT5G23210 28.276 435 261 14 24 427 37 451 8.08e-44 160
MS.gene073515.t1 AT2G24010 28.352 455 282 16 41 471 31 465 1.62e-43 160
MS.gene073515.t1 AT2G12480 26.566 463 282 14 19 467 8 426 2.84e-43 158
MS.gene073515.t1 AT5G42230 28.953 449 273 19 41 466 29 454 2.37e-42 156
MS.gene073515.t1 AT5G42230 28.953 449 273 19 41 466 29 454 2.37e-42 156
MS.gene073515.t1 AT5G42240 27.069 447 286 16 41 467 33 459 2.67e-42 156
MS.gene073515.t1 AT2G12480 26.509 464 282 15 19 467 8 427 1.62e-41 154
MS.gene073515.t1 AT3G17180 29.717 424 252 17 33 430 30 433 3.49e-41 152
MS.gene073515.t1 AT5G23210 27.384 409 249 12 94 471 8 399 7.60e-40 148
MS.gene073515.t1 AT2G24010 27.615 478 273 19 41 467 2 457 2.41e-39 148
MS.gene073515.t1 AT5G23210 27.206 408 249 12 95 471 8 398 5.34e-39 146
MS.gene073515.t1 AT3G45010 26.355 406 266 10 70 466 115 496 7.58e-39 147
MS.gene073515.t1 AT5G22980 29.268 410 247 16 70 466 112 491 7.59e-39 147
MS.gene073515.t1 AT3G10410 28.675 415 245 18 71 468 114 494 1.75e-35 138
MS.gene073515.t1 AT5G23210 26.374 364 221 11 95 427 8 355 1.42e-28 116
MS.gene073515.t1 AT3G56540 36.306 157 91 4 41 195 80 229 8.44e-25 103
MS.gene073515.t1 AT1G15000 25.280 447 256 18 42 466 31 421 4.64e-24 104
MS.gene073515.t1 AT2G24010 30.962 239 138 10 41 259 2 233 1.04e-22 99.8
MS.gene073515.t1 AT5G22960 34.337 166 82 4 56 220 35 174 2.11e-22 94.7
MS.gene073515.t1 AT2G24000 24.555 281 200 6 194 467 118 393 6.33e-20 92.0

Find 101 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGATCTGTTCCACATTT+TGG 0.131981 4.1:-76697473 MS.gene073515:CDS
TCTTAAACACAACTCATTTC+TGG 0.162375 4.1:+76697826 None:intergenic
TCTTATCATCAGTGCCTTTC+AGG 0.165945 4.1:-76697496 MS.gene073515:intron
ATTCCCATTCCATGAGTAAA+TGG 0.201662 4.1:+76698026 None:intergenic
CCTCTTATGCTTTGGTTAAC+TGG 0.223979 4.1:-76700361 MS.gene073515:CDS
TTTCTCTGTGTGTTGTTATA+GGG 0.242077 4.1:+76698063 None:intergenic
TTAACTCATATTGAAGCTTA+TGG 0.264666 4.1:-76700950 MS.gene073515:CDS
TCTGGACTTGCCTATCAAAT+AGG 0.272453 4.1:-76700316 MS.gene073515:intron
GATACCGCTCTTTGATTTAC+AGG 0.281285 4.1:-76696931 MS.gene073515:intron
CTTAATTAATTGCAGGGTTC+AGG 0.282365 4.1:-76695188 MS.gene073515:intron
TTGAAAATTACCTATTTGAT+AGG 0.283259 4.1:+76700306 None:intergenic
TTTGATAGGTACGTGGGGTT+AGG 0.283274 4.1:-76700451 MS.gene073515:intron
TTGATAGGTACGTGGGGTTA+GGG 0.325028 4.1:-76700450 MS.gene073515:intron
TGTCTACTCAAGCTTGGATT+AGG 0.336911 4.1:-76696054 MS.gene073515:CDS
CGGTTTACTTGCCTCATCAT+AGG 0.341096 4.1:+76697793 None:intergenic
TGGAGGCCATGGTTTGTAAA+TGG 0.346299 4.1:-76696004 MS.gene073515:CDS
TCCTAAGAAATTGAAGAGTA+TGG 0.358041 4.1:+76699058 None:intergenic
TCAAAGGTTGAACAACTTCC+TGG 0.360669 4.1:-76700926 MS.gene073515:CDS
ACCATACTCTTCAATTTCTT+AGG 0.361295 4.1:-76699059 MS.gene073515:CDS
TGATTAACAGGAAATGAAAA+AGG 0.372135 4.1:-76698270 MS.gene073515:intron
GTTTACTTGGCAGTTTAGTT+CGG 0.379290 4.1:+76697363 None:intergenic
TCCTTGATTTCAAATGCAAT+TGG 0.380583 4.1:+76699462 None:intergenic
ATCTTTGACTCAGGAGTTGA+AGG 0.381454 4.1:-76697413 MS.gene073515:CDS
TTTACTTGGCAGTTTAGTTC+GGG 0.382908 4.1:+76697364 None:intergenic
TCCAATTGCATTTGAAATCA+AGG 0.383040 4.1:-76699463 MS.gene073515:CDS
ATTTGAAATTTCTTGAAGAA+TGG 0.384481 4.1:+76698571 None:intergenic
CGACGGGAGCGTGCCTAGTT+TGG 0.389176 4.1:-76699436 MS.gene073515:CDS
GAAATTTCTTGAAGAATGGC+TGG 0.393437 4.1:+76698575 None:intergenic
CTTTCATGTCTACTCAAGCT+TGG 0.398114 4.1:-76696060 MS.gene073515:CDS
TGCAGGGAACCATAGGGAAA+TGG 0.401064 4.1:-76697030 MS.gene073515:intron
CAGCGATGTTCTTACCTTCA+CGG 0.403156 4.1:+76695318 None:intergenic
AGAAAGATCCTCTTATGCTT+TGG 0.405600 4.1:-76700369 MS.gene073515:CDS
CTTTGGTTAACTGGTGGTCC+TGG 0.408919 4.1:-76700352 MS.gene073515:CDS
GTAGATTTGCCACTTGGAAC+TGG 0.409499 4.1:-76699135 MS.gene073515:CDS
TCACGGATCATCGGAGCGAC+TGG 0.415782 4.1:-76699092 MS.gene073515:CDS
CCAGTTAACCAAAGCATAAG+AGG 0.430684 4.1:+76700361 None:intergenic
ACTACTCCATTGTAGATGAT+TGG 0.433138 4.1:-76696024 MS.gene073515:CDS
ATCCCATTTACTCATGGAAT+GGG 0.451576 4.1:-76698029 MS.gene073515:CDS
GCAGGGAACCATAGGGAAAT+GGG 0.468772 4.1:-76697029 MS.gene073515:intron
ATTCTTCAAGAAATTTCAAA+TGG 0.469672 4.1:-76698569 MS.gene073515:intron
TATCAAATCCCATTTACTCA+TGG 0.476162 4.1:-76698035 MS.gene073515:CDS
GACCCAGTTTCAAGTTCAAA+AGG 0.476471 4.1:+76700887 None:intergenic
TCTTGAAGAATGGCTGGGAC+AGG 0.476940 4.1:+76698581 None:intergenic
CTTTCAAATGAATTCTACAT+TGG 0.479014 4.1:-76698626 MS.gene073515:CDS
TTCCCATTCCATGAGTAAAT+GGG 0.481220 4.1:+76698027 None:intergenic
TGTCAGATACTACTAGCTCT+TGG 0.488028 4.1:-76700992 MS.gene073515:CDS
TGAGCATTGCAGGGAACCAT+AGG 0.491603 4.1:-76697037 MS.gene073515:intron
TGTGGCCTCAAGACCAAACT+AGG 0.493874 4.1:+76699423 None:intergenic
CCTTGAGATTTATCAATGGT+TGG 0.494155 4.1:+76698244 None:intergenic
AATCCCATTTACTCATGGAA+TGG 0.496948 4.1:-76698030 MS.gene073515:CDS
TACTCTTCAATTTCTTAGGA+AGG 0.501252 4.1:-76699055 MS.gene073515:intron
TGAAGTGAATTATGAGAAGG+AGG 0.504769 4.1:+76701025 None:intergenic
ACAACGTTCCCATTTCCCTA+TGG 0.512118 4.1:+76697021 None:intergenic
TTGTAGATGATTGGAGGCCA+TGG 0.515469 4.1:-76696015 MS.gene073515:CDS
CATATATTTGATAGGTACGT+GGG 0.520465 4.1:-76700457 MS.gene073515:intron
GAAACCTTGAGATTTATCAA+TGG 0.525518 4.1:+76698240 None:intergenic
GTGGAGAAGATCTTTGACTC+AGG 0.525567 4.1:-76697422 MS.gene073515:CDS
GGTAGTGGCCCTTGAAAACC+AGG 0.530817 4.1:+76700908 None:intergenic
AACATGGCAAAACATTGCTC+AGG 0.535431 4.1:+76695143 None:intergenic
CTTGAGATTCTGATTTACAA+AGG 0.544758 4.1:+76695098 None:intergenic
CCAACCATTGATAAATCTCA+AGG 0.544985 4.1:-76698244 MS.gene073515:intron
TGGTCTTGAGGCCACAGTCA+TGG 0.546927 4.1:-76699416 MS.gene073515:CDS
ATTGGAGCTGATTCATACTC+AGG 0.549342 4.1:-76698608 MS.gene073515:CDS
CTTATGCTTTGGTTAACTGG+TGG 0.549628 4.1:-76700358 MS.gene073515:CDS
TTGTAAATGGTCAAGTGGGA+GGG 0.549632 4.1:-76695991 MS.gene073515:intron
GCGTGCCTAGTTTGGTCTTG+AGG 0.549911 4.1:-76699428 MS.gene073515:CDS
TACTTGCCTCATCATAGGAT+CGG 0.555204 4.1:+76697798 None:intergenic
TATTGAAGCTTATGGCTCAA+AGG 0.556674 4.1:-76700942 MS.gene073515:CDS
GTTTCAAGTTCAAAAGGTAG+TGG 0.558447 4.1:+76700893 None:intergenic
GAGCATTGCAGGGAACCATA+GGG 0.560239 4.1:-76697036 MS.gene073515:intron
TTGAAATCAAGGAGTACGAC+GGG 0.564117 4.1:-76699452 MS.gene073515:CDS
ACTCCATTGTAGATGATTGG+AGG 0.565180 4.1:-76696021 MS.gene073515:CDS
TAGTGAAGTGAATTATGAGA+AGG 0.571718 4.1:+76701022 None:intergenic
ACTTGACCATTTACAAACCA+TGG 0.575649 4.1:+76695998 None:intergenic
AAATTTCTTGAAGAATGGCT+GGG 0.584151 4.1:+76698576 None:intergenic
TGATAGGTACGTGGGGTTAG+GGG 0.585717 4.1:-76700449 MS.gene073515:intron
TAACGATGAGCGTGTTCGCA+AGG 0.586052 4.1:-76697231 MS.gene073515:CDS
CAAGGCATTGCATATTCGAG+AGG 0.590093 4.1:-76697213 MS.gene073515:intron
CATTGCTCAGGAGTGTACTC+AGG 0.590734 4.1:+76695155 None:intergenic
ATGGTTTGTAAATGGTCAAG+TGG 0.593420 4.1:-76695996 MS.gene073515:CDS
GTGACGATGATCCGCGTCTG+TGG 0.593713 4.1:-76697441 MS.gene073515:CDS
TTTGTAAATGGTCAAGTGGG+AGG 0.596202 4.1:-76695992 MS.gene073515:CDS
CAAGCTTGAGTAGACATGAA+AGG 0.607068 4.1:+76696061 None:intergenic
AGATATCCACCTAGTGAACA+TGG 0.610797 4.1:+76695127 None:intergenic
TCCTTTCATGCAGATACACA+AGG 0.615114 4.1:-76695369 MS.gene073515:intron
TCATATATTTGATAGGTACG+TGG 0.623494 4.1:-76700458 MS.gene073515:intron
TGGCCTCCAATCATCTACAA+TGG 0.626622 4.1:+76696018 None:intergenic
TGGTTTGTAAATGGTCAAGT+GGG 0.635753 4.1:-76695995 MS.gene073515:CDS
GGAACAGATCAAGTCCTGAA+AGG 0.642344 4.1:+76697482 None:intergenic
AGCATAAGAGGATCTTTCTG+AGG 0.643360 4.1:+76700373 None:intergenic
AACACCTTTGTCCATGACTG+TGG 0.650204 4.1:+76699405 None:intergenic
CATGAAACTCAAAGCTACCA+AGG 0.654165 4.1:+76696972 None:intergenic
TTCACCTGTAAATCAAAGAG+CGG 0.660021 4.1:+76696927 None:intergenic
GAGGCCACAGTCATGGACAA+AGG 0.660835 4.1:-76699409 MS.gene073515:intron
AAAGATCTTCTCCACAGACG+CGG 0.666238 4.1:+76697430 None:intergenic
AGATCTCCGATCCTATGATG+AGG 0.667078 4.1:-76697804 MS.gene073515:intron
GCTTGCAAAGATGAACATGA+TGG 0.680214 4.1:-76701050 None:intergenic
CATTTCTGATGAACTCTACG+CGG 0.688710 4.1:-76698003 MS.gene073515:intron
TATGAGAAACCAGTTCCAAG+TGG 0.692436 4.1:+76699126 None:intergenic
ATATATTTGATAGGTACGTG+GGG 0.700917 4.1:-76700456 MS.gene073515:intron
TTTGAAATCAAGGAGTACGA+CGG 0.702574 4.1:-76699453 MS.gene073515:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTAATTGTCTATAA+AGG - chr4.1:76700911-76700930 MS.gene073515:CDS 10.0%
!! AATATTTAATTGTCTATAAA+GGG - chr4.1:76700912-76700931 MS.gene073515:CDS 10.0%
!! ATCAAATTTAAATATGTAAA+TGG - chr4.1:76700189-76700208 MS.gene073515:intron 10.0%
!!! TTTTTTTTCTTTTCTATTTT+AGG - chr4.1:76695328-76695347 MS.gene073515:intron 10.0%
!! AAACTAATTATTGGAAAATT+TGG - chr4.1:76700451-76700470 MS.gene073515:intron 15.0%
!! AAATCAATGTTGAATTATTT+AGG + chr4.1:76696780-76696799 None:intergenic 15.0%
!! AAATTATAGAAAAATAGGAT+TGG + chr4.1:76700693-76700712 None:intergenic 15.0%
!! AATATTAAACAAAGAGAAAT+AGG + chr4.1:76697399-76697418 None:intergenic 15.0%
!! ATAATAGGTATAGATAAAAT+TGG + chr4.1:76698392-76698411 None:intergenic 15.0%
!! ATATAAATCATAGTTCTTAT+TGG + chr4.1:76696832-76696851 None:intergenic 15.0%
!! ATGAACAAAAAATCTAAATA+GGG - chr4.1:76697969-76697988 MS.gene073515:intron 15.0%
!! GAAATAATAGTTTAACAATA+TGG + chr4.1:76698635-76698654 None:intergenic 15.0%
!! TAGAACAAAGAAAATAATAA+GGG - chr4.1:76698535-76698554 MS.gene073515:intron 15.0%
!! TTATAATTATAATTCCAATG+AGG - chr4.1:76697668-76697687 MS.gene073515:intron 15.0%
!! TTTAGTATCATCTTAATAAT+AGG + chr4.1:76698407-76698426 None:intergenic 15.0%
!!! AAAGACATTTTACAATTTTT+GGG + chr4.1:76700262-76700281 None:intergenic 15.0%
!!! CTTTGTTTAATATTTACTTT+AGG - chr4.1:76697405-76697424 MS.gene073515:CDS 15.0%
!!! TATTTAGATTTTTTGTTCAT+CGG + chr4.1:76697969-76697988 None:intergenic 15.0%
!!! TATTTTCATGATTTCATTAT+TGG - chr4.1:76696934-76696953 MS.gene073515:CDS 15.0%
!! AATTGTGCAAAACTAATTAT+TGG - chr4.1:76700442-76700461 MS.gene073515:CDS 20.0%
!! ACTGTTAATAAGAAAATCAA+TGG - chr4.1:76699844-76699863 MS.gene073515:intron 20.0%
!! ATAATCAATTTATTAGAGTG+AGG + chr4.1:76697726-76697745 None:intergenic 20.0%
!! ATCATCAATTGAATGTTAAT+AGG - chr4.1:76696666-76696685 MS.gene073515:intron 20.0%
!! ATTCTTCAAGAAATTTCAAA+TGG - chr4.1:76697583-76697602 MS.gene073515:intron 20.0%
!! GATGAACAAAAAATCTAAAT+AGG - chr4.1:76697968-76697987 MS.gene073515:intron 20.0%
!! GTAGAACAAAGAAAATAATA+AGG - chr4.1:76698534-76698553 MS.gene073515:intron 20.0%
!! TAAGTTATGAAAAGTTTACT+TGG + chr4.1:76698805-76698824 None:intergenic 20.0%
!! TAATCAATTTATTAGAGTGA+GGG + chr4.1:76697725-76697744 None:intergenic 20.0%
!! TCCAAAATAGATATACATTA+TGG + chr4.1:76696281-76696300 None:intergenic 20.0%
!! TTGAAAATTACCTATTTGAT+AGG + chr4.1:76695849-76695868 None:intergenic 20.0%
!! TTTAAGAATAACACTCAATT+TGG - chr4.1:76700886-76700905 MS.gene073515:intron 20.0%
!!! ACAGTTTGTTAATACATAAT+TGG - chr4.1:76695903-76695922 MS.gene073515:intron 20.0%
!!! ACCATAATGTATATCTATTT+TGG - chr4.1:76696277-76696296 MS.gene073515:intron 20.0%
!!! ATCACATTTGAAACATTTTA+TGG + chr4.1:76698843-76698862 None:intergenic 20.0%
!!! ATTTGAAATTTCTTGAAGAA+TGG + chr4.1:76697584-76697603 None:intergenic 20.0%
!!! ATTTTTGCTTAATTAATTGC+AGG - chr4.1:76700957-76700976 MS.gene073515:CDS 20.0%
!!! CTTTTTGAAACTATCTAAAA+AGG + chr4.1:76696052-76696071 None:intergenic 20.0%
!!! GAAAGACATTTTACAATTTT+TGG + chr4.1:76700263-76700282 None:intergenic 20.0%
!!! TAGTAATGTTAATGATCTTT+TGG - chr4.1:76696972-76696991 MS.gene073515:CDS 20.0%
!!! TTAAGATGATACTAAAGTTT+TGG - chr4.1:76698411-76698430 MS.gene073515:intron 20.0%
!!! TTTTTGCTTAATTAATTGCA+GGG - chr4.1:76700958-76700977 MS.gene073515:CDS 20.0%
! AAAATGCTCAATATTTCAGA+TGG - chr4.1:76697617-76697636 MS.gene073515:intron 25.0%
! AAATCAATTGTTGATGTTAC+CGG + chr4.1:76699909-76699928 None:intergenic 25.0%
! AACAGAAGAAGTTAACAAAA+AGG + chr4.1:76700293-76700312 None:intergenic 25.0%
! AAGATCATTAACATTACTAC+CGG + chr4.1:76696971-76696990 None:intergenic 25.0%
! AATCAATTTATTAGAGTGAG+GGG + chr4.1:76697724-76697743 None:intergenic 25.0%
! ACATCAATTTCAGTTCATTA+GGG - chr4.1:76700365-76700384 MS.gene073515:CDS 25.0%
! ACCTAATAAAAGAAAAGTGA+TGG + chr4.1:76696438-76696457 None:intergenic 25.0%
! AGAAAAACACTACATACATA+TGG + chr4.1:76699302-76699321 None:intergenic 25.0%
! AGCTTTACTGAAGAATAATA+AGG + chr4.1:76698184-76698203 None:intergenic 25.0%
! AGGTATAGATAAAATTGGAA+TGG + chr4.1:76698387-76698406 None:intergenic 25.0%
! AGTGAATTTGTAACAGAAAA+TGG + chr4.1:76695307-76695326 None:intergenic 25.0%
! ATAAACTCCTCATATTAAAC+TGG - chr4.1:76698979-76698998 MS.gene073515:intron 25.0%
! ATTTGTAACAGAAAATGGAA+TGG + chr4.1:76695302-76695321 None:intergenic 25.0%
! CAATTATCTGTATTGTATAG+TGG - chr4.1:76697482-76697501 MS.gene073515:CDS 25.0%
! CATGTATATCTAAGCAAAAA+AGG - chr4.1:76699199-76699218 MS.gene073515:intron 25.0%
! CTTTCAAATGAATTCTACAT+TGG - chr4.1:76697526-76697545 MS.gene073515:intron 25.0%
! GACTAATACTTTGTAATTTC+AGG - chr4.1:76700580-76700599 MS.gene073515:intron 25.0%
! GATACAAAATCTATACTAAC+TGG + chr4.1:76696204-76696223 None:intergenic 25.0%
! GTTTATAAAGCAATGTAGTT+GGG - chr4.1:76699740-76699759 MS.gene073515:intron 25.0%
! TAAGTTCATTATGCTAACTA+GGG - chr4.1:76697120-76697139 MS.gene073515:intron 25.0%
! TAATGAACTGAAATTGATGT+GGG + chr4.1:76700365-76700384 None:intergenic 25.0%
! TAGATAAAATTGGAATGGAA+CGG + chr4.1:76698382-76698401 None:intergenic 25.0%
! TGATTAACAGGAAATGAAAA+AGG - chr4.1:76697882-76697901 MS.gene073515:intron 25.0%
! TGTCTAATTCTCAAAAATGA+AGG + chr4.1:76700233-76700252 None:intergenic 25.0%
! TGTGTGTTCATATATTTGAT+AGG - chr4.1:76695687-76695706 MS.gene073515:intron 25.0%
! TGTTTATAAAGCAATGTAGT+TGG - chr4.1:76699739-76699758 MS.gene073515:intron 25.0%
! TTAACTCATATTGAAGCTTA+TGG - chr4.1:76695202-76695221 MS.gene073515:intron 25.0%
! TTCATGATTTCATTATTGGA+AGG - chr4.1:76696938-76696957 MS.gene073515:CDS 25.0%
! TTGATTTAGATTAGGATACA+AGG + chr4.1:76700758-76700777 None:intergenic 25.0%
! TTTCCATTTCTTTGATTAAC+AGG - chr4.1:76697870-76697889 MS.gene073515:CDS 25.0%
! TTTCCTGTTAATCAAAGAAA+TGG + chr4.1:76697876-76697895 None:intergenic 25.0%
!! ACTAATTTTCCTAGGAAATT+TGG - chr4.1:76700388-76700407 MS.gene073515:CDS 25.0%
!! CTAATTTTCCTAGGAAATTT+GGG - chr4.1:76700389-76700408 MS.gene073515:CDS 25.0%
!! GTTAATTTTTCTCATGATGA+AGG - chr4.1:76697307-76697326 MS.gene073515:intron 25.0%
!! TAGTTTCAAAAAGTGTACTA+AGG - chr4.1:76696059-76696078 MS.gene073515:CDS 25.0%
!! TATGAAATTTAGGGTTCTTA+GGG + chr4.1:76700477-76700496 None:intergenic 25.0%
!! TATGTATGTAGTGTTTTTCT+TGG - chr4.1:76699302-76699321 MS.gene073515:intron 25.0%
!!! GGAAATTGTTGATTTAGATT+AGG + chr4.1:76700766-76700785 None:intergenic 25.0%
!!! GTTCGTATTGATTAGAAAAT+TGG + chr4.1:76696259-76696278 None:intergenic 25.0%
!!! TAGTATAAACTGACTTGATT+CGG - chr4.1:76697787-76697806 MS.gene073515:intron 25.0%
!!! TCCATCACTTTTCTTTTATT+AGG - chr4.1:76696434-76696453 MS.gene073515:intron 25.0%
!!! TCTGAAATATTGAGCATTTT+AGG + chr4.1:76697617-76697636 None:intergenic 25.0%
AAAATTGACCGACTAAACTA+AGG + chr4.1:76696392-76696411 None:intergenic 30.0%
AAAGAAAAAGTCTGAAGATG+TGG + chr4.1:76697182-76697201 None:intergenic 30.0%
AAAGAAGTCTCAACAACTAA+TGG - chr4.1:76699062-76699081 MS.gene073515:CDS 30.0%
AAATTTCTTGAAGAATGGCT+GGG + chr4.1:76697579-76697598 None:intergenic 30.0%
AACAAATGATTGAGTTCAAG+CGG + chr4.1:76695605-76695624 None:intergenic 30.0%
AATCAATTGTTGATGTTACC+GGG + chr4.1:76699908-76699927 None:intergenic 30.0%
AATGCATATAACAAGATCGA+TGG + chr4.1:76698021-76698040 None:intergenic 30.0%
ACAAGAAAATAGCCAAATCA+TGG + chr4.1:76696570-76696589 None:intergenic 30.0%
ACCATACTCTTCAATTTCTT+AGG - chr4.1:76697093-76697112 MS.gene073515:intron 30.0%
ATATATTTGATAGGTACGTG+GGG - chr4.1:76695696-76695715 MS.gene073515:intron 30.0%
ATCAATTTATTAGAGTGAGG+GGG + chr4.1:76697723-76697742 None:intergenic 30.0%
ATTATTGGAAGGTGATTTAC+CGG - chr4.1:76696949-76696968 MS.gene073515:CDS 30.0%
CACATCAATTTCAGTTCATT+AGG - chr4.1:76700364-76700383 MS.gene073515:CDS 30.0%
CATATATTTGATAGGTACGT+GGG - chr4.1:76695695-76695714 MS.gene073515:intron 30.0%
CTAAGAACCCTAAATTTCAT+AGG - chr4.1:76700476-76700495 MS.gene073515:intron 30.0%
CTAATGAACTGAAATTGATG+TGG + chr4.1:76700366-76700385 None:intergenic 30.0%
CTCATATGCAAAAAATGTCA+CGG - chr4.1:76697043-76697062 MS.gene073515:intron 30.0%
GAAACCTTGAGATTTATCAA+TGG + chr4.1:76697915-76697934 None:intergenic 30.0%
GGGATACAACATAATAAATC+AGG + chr4.1:76696323-76696342 None:intergenic 30.0%
GTAAGTTCATTATGCTAACT+AGG - chr4.1:76697119-76697138 MS.gene073515:intron 30.0%
TACTCTTCAATTTCTTAGGA+AGG - chr4.1:76697097-76697116 MS.gene073515:intron 30.0%
TACTTCGCCTATGAAATTTA+GGG + chr4.1:76700486-76700505 None:intergenic 30.0%
TAGTGAAGTGAATTATGAGA+AGG + chr4.1:76695133-76695152 None:intergenic 30.0%
TATCAAATCCCATTTACTCA+TGG - chr4.1:76698117-76698136 MS.gene073515:intron 30.0%
TATGACAATTGATGTGTTGT+TGG - chr4.1:76700043-76700062 MS.gene073515:intron 30.0%
TCATATATTTGATAGGTACG+TGG - chr4.1:76695694-76695713 MS.gene073515:intron 30.0%
TCCTAAGAAATTGAAGAGTA+TGG + chr4.1:76697097-76697116 None:intergenic 30.0%
TCCTTGATTTCAAATGCAAT+TGG + chr4.1:76696693-76696712 None:intergenic 30.0%
TCGTAAATGAAGATCATAGT+CGG + chr4.1:76697333-76697352 None:intergenic 30.0%
TCTGTTTCCAGTTTAATATG+AGG + chr4.1:76698989-76699008 None:intergenic 30.0%
TCTTAAACACAACTCATTTC+TGG + chr4.1:76698329-76698348 None:intergenic 30.0%
TGAAAAATACCTCCGAAAAA+CGG + chr4.1:76699390-76699409 None:intergenic 30.0%
TGATCTTCATTTACGAAAAC+TGG - chr4.1:76697337-76697356 MS.gene073515:intron 30.0%
TGATTATTTGCATTCTCCTA+TGG - chr4.1:76697739-76697758 MS.gene073515:intron 30.0%
TTAAATTACTATGCATGTCC+CGG - chr4.1:76699887-76699906 MS.gene073515:intron 30.0%
TTAGAAAATTTCAGCCTCAT+TGG + chr4.1:76697685-76697704 None:intergenic 30.0%
TTGGATATGTATAACACACA+TGG - chr4.1:76695922-76695941 MS.gene073515:intron 30.0%
TTGTTAACTTCTTCTGTTAG+AGG - chr4.1:76700295-76700314 MS.gene073515:intron 30.0%
! AAACCAGTCTCAATATTTTC+AGG - chr4.1:76698050-76698069 MS.gene073515:CDS 30.0%
! AACCAGTCTCAATATTTTCA+GGG - chr4.1:76698051-76698070 MS.gene073515:CDS 30.0%
! AAGGTGTCTTATTATGTTCT+AGG + chr4.1:76700739-76700758 None:intergenic 30.0%
! ATTCATTTTGCAGTGAAATG+TGG - chr4.1:76696230-76696249 MS.gene073515:intron 30.0%
! ATTTTTGTAGATTTGCCACT+TGG - chr4.1:76697011-76697030 MS.gene073515:CDS 30.0%
! CTATGAAATTTAGGGTTCTT+AGG + chr4.1:76700478-76700497 None:intergenic 30.0%
! GAATGAGAAGAACTATTTTG+TGG + chr4.1:76696523-76696542 None:intergenic 30.0%
! GCATAGTAAAAAGTTCTGAT+AGG + chr4.1:76699773-76699792 None:intergenic 30.0%
! TACCTTTTGAACTTGAAACT+GGG - chr4.1:76695263-76695282 MS.gene073515:intron 30.0%
! TAGCTTTCTTGATGACATTA+AGG - chr4.1:76700007-76700026 MS.gene073515:intron 30.0%
! TCCAATTGCATTTGAAATCA+AGG - chr4.1:76696689-76696708 MS.gene073515:intron 30.0%
! TTCATTTTGCAGTGAAATGT+GGG - chr4.1:76696231-76696250 MS.gene073515:intron 30.0%
! TTTCTCTGTGTGTTGTTATA+GGG + chr4.1:76698092-76698111 None:intergenic 30.0%
! TTTTTACCTCAGCACAAAAT+GGG - chr4.1:76698897-76698916 MS.gene073515:intron 30.0%
!! ATGATACTAAAGTTTTGGTG+TGG - chr4.1:76698416-76698435 MS.gene073515:intron 30.0%
!! GAAAATATTGAGACTGGTTT+AGG + chr4.1:76698050-76698069 None:intergenic 30.0%
!! GACTAAAAAGTGTTTCATGT+AGG - chr4.1:76695530-76695549 MS.gene073515:intron 30.0%
!! TCGAATTTTGAGTCATAGTT+AGG + chr4.1:76697441-76697460 None:intergenic 30.0%
!! TGATGATGTGTTTTACTTGA+TGG - chr4.1:76698236-76698255 MS.gene073515:intron 30.0%
!! TTTGGCTATTTTCTTGTGTT+TGG - chr4.1:76696573-76696592 MS.gene073515:intron 30.0%
!! TTTTCTCTGTGTGTTGTTAT+AGG + chr4.1:76698093-76698112 None:intergenic 30.0%
!!! AAATGAAGGACTATTTTGAC+TGG + chr4.1:76700219-76700238 None:intergenic 30.0%
AAAATAGCTAGTAAGCCCTT+AGG + chr4.1:76699569-76699588 None:intergenic 35.0%
AAATGAGAGACTGGTAAAGA+TGG - chr4.1:76698563-76698582 MS.gene073515:intron 35.0%
AATCCCATTTACTCATGGAA+TGG - chr4.1:76698122-76698141 MS.gene073515:intron 35.0%
ACATCATCATTGTAACCAAC+AGG + chr4.1:76698225-76698244 None:intergenic 35.0%
ACTACTCCATTGTAGATGAT+TGG - chr4.1:76700128-76700147 MS.gene073515:intron 35.0%
ACTCTATGAATGTTGTTGAG+TGG + chr4.1:76696637-76696656 None:intergenic 35.0%
ACTTGACCATTTACAAACCA+TGG + chr4.1:76700157-76700176 None:intergenic 35.0%
AGAAAGATCCTCTTATGCTT+TGG - chr4.1:76695783-76695802 MS.gene073515:intron 35.0%
ATAAAGAATGACACTCCTCA+AGG - chr4.1:76695403-76695422 MS.gene073515:intron 35.0%
ATCCCATTTACTCATGGAAT+GGG - chr4.1:76698123-76698142 MS.gene073515:intron 35.0%
ATCCCTGAAAATATTGAGAC+TGG + chr4.1:76698056-76698075 None:intergenic 35.0%
ATGATGTGTAATCAACGTGA+AGG - chr4.1:76700524-76700543 MS.gene073515:intron 35.0%
ATTCCCATTCCATGAGTAAA+TGG + chr4.1:76698129-76698148 None:intergenic 35.0%
CAAAAAATGTCACGGATCAT+CGG - chr4.1:76697051-76697070 MS.gene073515:intron 35.0%
CAACAGTAGCTACTTAATCA+TGG - chr4.1:76698461-76698480 MS.gene073515:intron 35.0%
CACAAAAACGATCCAAAATG+TGG + chr4.1:76698694-76698713 None:intergenic 35.0%
CAGATGTTCAATTGTAGATG+TGG - chr4.1:76696114-76696133 MS.gene073515:intron 35.0%
CATACATTGTACTTTCCTGT+TGG - chr4.1:76698207-76698226 MS.gene073515:intron 35.0%
CATAGTAATGCATAGTTCGT+CGG - chr4.1:76695492-76695511 MS.gene073515:intron 35.0%
CCAACCATTGATAAATCTCA+AGG - chr4.1:76697908-76697927 MS.gene073515:intron 35.0%
CCTTGAGATTTATCAATGGT+TGG + chr4.1:76697911-76697930 None:intergenic 35.0%
CGAAGCAATATGAGATTTCT+TGG - chr4.1:76699506-76699525 MS.gene073515:intron 35.0%
CGGTCAAAACTTCAGAAAAT+TGG + chr4.1:76699646-76699665 None:intergenic 35.0%
CGTGACAAGAAATATGACAA+CGG + chr4.1:76697372-76697391 None:intergenic 35.0%
CTACCTAACCTTAGTTTAGT+CGG - chr4.1:76696381-76696400 MS.gene073515:intron 35.0%
CTACTTCGCCTATGAAATTT+AGG + chr4.1:76700487-76700506 None:intergenic 35.0%
CTTAATTAATTGCAGGGTTC+AGG - chr4.1:76700964-76700983 MS.gene073515:CDS 35.0%
GAAATTTCTTGAAGAATGGC+TGG + chr4.1:76697580-76697599 None:intergenic 35.0%
GACTTACACAAGAACTAAAG+CGG + chr4.1:76699666-76699685 None:intergenic 35.0%
GATGGTCTACTGTTATCTAT+TGG - chr4.1:76698254-76698273 MS.gene073515:CDS 35.0%
GTTTACTTGGCAGTTTAGTT+CGG + chr4.1:76698792-76698811 None:intergenic 35.0%
GTTTCATGTAGGATTCAACT+CGG - chr4.1:76695541-76695560 MS.gene073515:intron 35.0%
TAACAAGATCGATGGAACAA+AGG + chr4.1:76698013-76698032 None:intergenic 35.0%
TATGATGACCCAAATTTCCT+AGG + chr4.1:76700400-76700419 None:intergenic 35.0%
TATTGAAGCTTATGGCTCAA+AGG - chr4.1:76695210-76695229 MS.gene073515:intron 35.0%
TCGAGATCATCATAGTCAAT+CGG + chr4.1:76696344-76696363 None:intergenic 35.0%
TCGATGTGATAACCATGATT+TGG - chr4.1:76696555-76696574 MS.gene073515:intron 35.0%
TCTTGCTAAACTAAACCTTG+AGG + chr4.1:76695421-76695440 None:intergenic 35.0%
TGAAGTGAATTATGAGAAGG+AGG + chr4.1:76695130-76695149 None:intergenic 35.0%
TGATGTGTAATCAACGTGAA+GGG - chr4.1:76700525-76700544 MS.gene073515:intron 35.0%
TTCACCTGTAAATCAAAGAG+CGG + chr4.1:76699228-76699247 None:intergenic 35.0%
TTCCCATTCCATGAGTAAAT+GGG + chr4.1:76698128-76698147 None:intergenic 35.0%
TTGAGTGGATCAATTTCAGT+AGG + chr4.1:76696622-76696641 None:intergenic 35.0%
TTGGGACATTAGTGTTAGAT+GGG + chr4.1:76699607-76699626 None:intergenic 35.0%
TTTCATGTAGGATTCAACTC+GGG - chr4.1:76695542-76695561 MS.gene073515:intron 35.0%
TTTGCTTTGCTTATTGCCAT+AGG + chr4.1:76697758-76697777 None:intergenic 35.0%
! AATGTTTTGCCATGTTCACT+AGG - chr4.1:76701016-76701035 MS.gene073515:CDS 35.0%
! ACTTGATCTGTTCCACATTT+TGG - chr4.1:76698679-76698698 MS.gene073515:intron 35.0%
! AGTCTATGATTTTTGCGAAC+TGG + chr4.1:76700616-76700635 None:intergenic 35.0%
! ATGGTTTGTAAATGGTCAAG+TGG - chr4.1:76700156-76700175 MS.gene073515:intron 35.0%
! CATTAGGGACTAATTTTCCT+AGG - chr4.1:76700380-76700399 MS.gene073515:CDS 35.0%
! CTACCTTTTGAACTTGAAAC+TGG - chr4.1:76695262-76695281 MS.gene073515:intron 35.0%
! CTATATTCTCCATTTTCTCC+TGG + chr4.1:76697265-76697284 None:intergenic 35.0%
! GTTTTTACCTCAGCACAAAA+TGG - chr4.1:76698896-76698915 MS.gene073515:intron 35.0%
! TATGAGATTTCTTGGTGTAC+TGG - chr4.1:76699514-76699533 MS.gene073515:intron 35.0%
! TGGTTTGTAAATGGTCAAGT+GGG - chr4.1:76700157-76700176 MS.gene073515:intron 35.0%
! TTTACTTGGCAGTTTAGTTC+GGG + chr4.1:76698791-76698810 None:intergenic 35.0%
! TTTGAAATCAAGGAGTACGA+CGG - chr4.1:76696699-76696718 MS.gene073515:intron 35.0%
! TTTTTGCCTATCAGAACAGA+AGG - chr4.1:76699804-76699823 MS.gene073515:intron 35.0%
!! AACAACTTCCTGGTTTTCAA+GGG - chr4.1:76695236-76695255 MS.gene073515:intron 35.0%
!! AAGTCTATTGCACCGTTTTT+CGG - chr4.1:76699375-76699394 MS.gene073515:intron 35.0%
!! ACACACATGGATTGTTTTTC+TGG - chr4.1:76695935-76695954 MS.gene073515:intron 35.0%
!! AGTGAGCATTTTGCTTTAGA+AGG - chr4.1:76699340-76699359 MS.gene073515:intron 35.0%
!! ATTTTCAGGGATATCTGCTA+GGG - chr4.1:76698064-76698083 MS.gene073515:CDS 35.0%
!! GATTTTGAGAATGAGATCCT+TGG - chr4.1:76699163-76699182 MS.gene073515:intron 35.0%
!! GTTTCAAGTTCAAAAGGTAG+TGG + chr4.1:76695262-76695281 None:intergenic 35.0%
!! TATTTTCAGGGATATCTGCT+AGG - chr4.1:76698063-76698082 MS.gene073515:CDS 35.0%
!!! ACATAGTTTTGAGCATTGCA+GGG - chr4.1:76699106-76699125 MS.gene073515:CDS 35.0%
!!! ATTTTGCTTTAGAAGGTGGT+CGG - chr4.1:76699347-76699366 MS.gene073515:intron 35.0%
!!! CTAGCTATTTTTTGTGGCTT+TGG - chr4.1:76699578-76699597 MS.gene073515:intron 35.0%
!!! GGCTTACTAGCTATTTTTTG+TGG - chr4.1:76699572-76699591 MS.gene073515:intron 35.0%
!!! TACATAGTTTTGAGCATTGC+AGG - chr4.1:76699105-76699124 MS.gene073515:CDS 35.0%
!!! TCTTTACGCTCTGGTTTTTA+GGG + chr4.1:76697831-76697850 None:intergenic 35.0%
AACATGGCAAAACATTGCTC+AGG + chr4.1:76701012-76701031 None:intergenic 40.0%
AACTAATGGCGAAACTGCTA+GGG + chr4.1:76699431-76699450 None:intergenic 40.0%
ACTCCATTGTAGATGATTGG+AGG - chr4.1:76700131-76700150 MS.gene073515:intron 40.0%
ACTTCAGAAAATTGGAGCAG+CGG + chr4.1:76699638-76699657 None:intergenic 40.0%
AGATATCCACCTAGTGAACA+TGG + chr4.1:76701028-76701047 None:intergenic 40.0%
AGCATAAGAGGATCTTTCTG+AGG + chr4.1:76695782-76695801 None:intergenic 40.0%
ATCTTTGACTCAGGAGTTGA+AGG - chr4.1:76698739-76698758 MS.gene073515:intron 40.0%
ATGTCTTGTGCATAGAGTTG+CGG + chr4.1:76697231-76697250 None:intergenic 40.0%
ATTGTAGATGTGGCTGCATT+TGG - chr4.1:76696124-76696143 MS.gene073515:intron 40.0%
CAAGCTTGAGTAGACATGAA+AGG + chr4.1:76700094-76700113 None:intergenic 40.0%
CATGAAACTCAAAGCTACCA+AGG + chr4.1:76699183-76699202 None:intergenic 40.0%
CATTTCTGATGAACTCTACG+CGG - chr4.1:76698149-76698168 MS.gene073515:intron 40.0%
CCAGTTAACCAAAGCATAAG+AGG + chr4.1:76695794-76695813 None:intergenic 40.0%
CCTCTTATGCTTTGGTTAAC+TGG - chr4.1:76695791-76695810 MS.gene073515:intron 40.0%
CGAGATCATCATAGTCAATC+GGG + chr4.1:76696343-76696362 None:intergenic 40.0%
CGATGGAACAAAGGTAGTTT+CGG + chr4.1:76698004-76698023 None:intergenic 40.0%
CTTATGCTTTGGTTAACTGG+TGG - chr4.1:76695794-76695813 MS.gene073515:intron 40.0%
CTTTCATGTCTACTCAAGCT+TGG - chr4.1:76700092-76700111 MS.gene073515:intron 40.0%
GTTGGGACATTAGTGTTAGA+TGG + chr4.1:76699608-76699627 None:intergenic 40.0%
TACTTGCCTCATCATAGGAT+CGG + chr4.1:76698357-76698376 None:intergenic 40.0%
TATGAGAAACCAGTTCCAAG+TGG + chr4.1:76697029-76697048 None:intergenic 40.0%
TCAAAGGTTGAACAACTTCC+TGG - chr4.1:76695226-76695245 MS.gene073515:intron 40.0%
TCCTTGTGTATCTGCATGAA+AGG + chr4.1:76700787-76700806 None:intergenic 40.0%
TCCTTTCATGCAGATACACA+AGG - chr4.1:76700783-76700802 MS.gene073515:intron 40.0%
TCTGGACTTGCCTATCAAAT+AGG - chr4.1:76695836-76695855 MS.gene073515:intron 40.0%
TCTTATCATCAGTGCCTTTC+AGG - chr4.1:76698656-76698675 MS.gene073515:intron 40.0%
TCTTCACCTTCTGTTCTGAT+AGG + chr4.1:76699813-76699832 None:intergenic 40.0%
TGACCGACTAAACTAAGGTT+AGG + chr4.1:76696387-76696406 None:intergenic 40.0%
TGGGACATTAGTGTTAGATG+GGG + chr4.1:76699606-76699625 None:intergenic 40.0%
TGTCTACTCAAGCTTGGATT+AGG - chr4.1:76700098-76700117 MS.gene073515:intron 40.0%
TTCATAGGCGAAGTAGTCTA+TGG - chr4.1:76700491-76700510 MS.gene073515:intron 40.0%
TTGTAAATGGTCAAGTGGGA+GGG - chr4.1:76700161-76700180 MS.gene073515:intron 40.0%
TTTGTAAATGGTCAAGTGGG+AGG - chr4.1:76700160-76700179 MS.gene073515:intron 40.0%
TTTGTGAGTCGAATTACGAG+AGG - chr4.1:76696013-76696032 MS.gene073515:CDS 40.0%
! AATGACTTTTGCAACCGTGA+AGG - chr4.1:76700820-76700839 MS.gene073515:intron 40.0%
! AATTGATGTGTTGTTGGCAG+TGG - chr4.1:76700049-76700068 MS.gene073515:intron 40.0%
! ATTGGAGCTGATTCATACTC+AGG - chr4.1:76697544-76697563 MS.gene073515:intron 40.0%
! GATACCGCTCTTTGATTTAC+AGG - chr4.1:76699221-76699240 MS.gene073515:intron 40.0%
! TGTCAGATACTACTAGCTCT+TGG - chr4.1:76695160-76695179 MS.gene073515:CDS 40.0%
! TTGAAATCAAGGAGTACGAC+GGG - chr4.1:76696700-76696719 MS.gene073515:intron 40.0%
!! AAAGTTTTGGTGTGGTCTTG+AGG - chr4.1:76698424-76698443 MS.gene073515:intron 40.0%
!! GAACAACTTCCTGGTTTTCA+AGG - chr4.1:76695235-76695254 MS.gene073515:intron 40.0%
!! GACCCAGTTTCAAGTTCAAA+AGG + chr4.1:76695268-76695287 None:intergenic 40.0%
!!! CTTTACGCTCTGGTTTTTAG+GGG + chr4.1:76697830-76697849 None:intergenic 40.0%
!!! GAGCATTTTGCTTTAGAAGG+TGG - chr4.1:76699343-76699362 MS.gene073515:intron 40.0%
!!! GTCTTTACGCTCTGGTTTTT+AGG + chr4.1:76697832-76697851 None:intergenic 40.0%
!!! GTTTTGAAGTCTTTACGCTC+TGG + chr4.1:76697840-76697859 None:intergenic 40.0%
AAAGATCTTCTCCACAGACG+CGG + chr4.1:76698725-76698744 None:intergenic 45.0%
AACACCTTTGTCCATGACTG+TGG + chr4.1:76696750-76696769 None:intergenic 45.0%
ACAAACCACTCCACTAACCA+AGG + chr4.1:76699462-76699481 None:intergenic 45.0%
ACAACGTTCCCATTTCCCTA+TGG + chr4.1:76699134-76699153 None:intergenic 45.0%
AGATCTCCGATCCTATGATG+AGG - chr4.1:76698348-76698367 MS.gene073515:intron 45.0%
AGGCGAAGTAGTCTATGGTT+TGG - chr4.1:76700496-76700515 MS.gene073515:intron 45.0%
AGGGAAGAGAAATGAGAGAC+TGG - chr4.1:76698554-76698573 MS.gene073515:intron 45.0%
AGTAATGCATAGTTCGTCGG+TGG - chr4.1:76695495-76695514 MS.gene073515:intron 45.0%
ATGCTAACTAGGGTGCAGAA+GGG - chr4.1:76697130-76697149 MS.gene073515:intron 45.0%
CAACTAATGGCGAAACTGCT+AGG + chr4.1:76699432-76699451 None:intergenic 45.0%
CAGCGATGTTCTTACCTTCA+CGG + chr4.1:76700837-76700856 None:intergenic 45.0%
CCAGAAAAAGAAGAACAGCC+AGG + chr4.1:76695821-76695840 None:intergenic 45.0%
CCATTAGTTGAAAGACGCCT+TGG - chr4.1:76699442-76699461 MS.gene073515:CDS 45.0%
CGATTCTCGCTCTTCAAAAG+TGG + chr4.1:76699979-76699998 None:intergenic 45.0%
CGGTTTACTTGCCTCATCAT+AGG + chr4.1:76698362-76698381 None:intergenic 45.0%
CTATGTTCTTCAGTCCACTG+TGG + chr4.1:76699718-76699737 None:intergenic 45.0%
GAAGCAACTGACAGAGATGA+TGG + chr4.1:76697941-76697960 None:intergenic 45.0%
GGAACAGATCAAGTCCTGAA+AGG + chr4.1:76698673-76698692 None:intergenic 45.0%
GGACATTAGTGTTAGATGGG+GGG + chr4.1:76699604-76699623 None:intergenic 45.0%
GGGACATTAGTGTTAGATGG+GGG + chr4.1:76699605-76699624 None:intergenic 45.0%
GTGGAGAAGATCTTTGACTC+AGG - chr4.1:76698730-76698749 MS.gene073515:intron 45.0%
TAGTTCGTCGGTGGTAAGTA+AGG - chr4.1:76695504-76695523 MS.gene073515:intron 45.0%
TATGCTAACTAGGGTGCAGA+AGG - chr4.1:76697129-76697148 MS.gene073515:intron 45.0%
TGGCCTCCAATCATCTACAA+TGG + chr4.1:76700137-76700156 None:intergenic 45.0%
TTAGTTAAACAGCGCCACAG+TGG - chr4.1:76699701-76699720 MS.gene073515:intron 45.0%
TTGAAAGACGCCTTGGTTAG+TGG - chr4.1:76699449-76699468 MS.gene073515:CDS 45.0%
TTGATAGGTACGTGGGGTTA+GGG - chr4.1:76695702-76695721 MS.gene073515:intron 45.0%
TTGTAGATGATTGGAGGCCA+TGG - chr4.1:76700137-76700156 MS.gene073515:intron 45.0%
TTTGATAGGTACGTGGGGTT+AGG - chr4.1:76695701-76695720 MS.gene073515:intron 45.0%
! CCAAGGCGTCTTTCAACTAA+TGG + chr4.1:76699445-76699464 None:intergenic 45.0%
! CCTGGCTGTTCTTCTTTTTC+TGG - chr4.1:76695818-76695837 MS.gene073515:intron 45.0%
! CGAAGTAGTCTATGGTTTGG+TGG - chr4.1:76700499-76700518 MS.gene073515:intron 45.0%
! GTAGATTTGCCACTTGGAAC+TGG - chr4.1:76697017-76697036 MS.gene073515:CDS 45.0%
! GTTTTGCCATGTTCACTAGG+TGG - chr4.1:76701019-76701038 MS.gene073515:CDS 45.0%
! TGGAGGCCATGGTTTGTAAA+TGG - chr4.1:76700148-76700167 MS.gene073515:intron 45.0%
!! CAAGGCATTGCATATTCGAG+AGG - chr4.1:76698939-76698958 MS.gene073515:intron 45.0%
!! CACAGTGGACTGAAGAACAT+AGG - chr4.1:76699716-76699735 MS.gene073515:intron 45.0%
!! TCTATTGCACCGTTTTTCGG+AGG - chr4.1:76699378-76699397 MS.gene073515:intron 45.0%
!! TAAAAAAATTATAGAAAAAT+AGG + chr4.1:76700698-76700717 None:intergenic 5.0%
!!! AATCTTATTATATATTTTTT+TGG + chr4.1:76696489-76696508 None:intergenic 5.0%
CTGGAACAGTAACCCCAAGT+CGG - chr4.1:76699533-76699552 MS.gene073515:intron 50.0%
CTTTGGTTAACTGGTGGTCC+TGG - chr4.1:76695800-76695819 MS.gene073515:intron 50.0%
GCAGGGAACCATAGGGAAAT+GGG - chr4.1:76699123-76699142 MS.gene073515:CDS 50.0%
TAACGATGAGCGTGTTCGCA+AGG - chr4.1:76698921-76698940 MS.gene073515:intron 50.0%
TCTTGAAGAATGGCTGGGAC+AGG + chr4.1:76697574-76697593 None:intergenic 50.0%
TGATAGGTACGTGGGGTTAG+GGG - chr4.1:76695703-76695722 MS.gene073515:intron 50.0%
TGCAGGGAACCATAGGGAAA+TGG - chr4.1:76699122-76699141 MS.gene073515:CDS 50.0%
TGGAACAGTAACCCCAAGTC+GGG - chr4.1:76699534-76699553 MS.gene073515:intron 50.0%
TGTGGCCTCAAGACCAAACT+AGG + chr4.1:76696732-76696751 None:intergenic 50.0%
! AAATTGGAGCAGCGGACTTG+AGG + chr4.1:76699630-76699649 None:intergenic 50.0%
! CATTGCTCAGGAGTGTACTC+AGG + chr4.1:76701000-76701019 None:intergenic 50.0%
! CGTTAGCCCATTTTGTGCTG+AGG + chr4.1:76698906-76698925 None:intergenic 50.0%
! GAGCATTGCAGGGAACCATA+GGG - chr4.1:76699116-76699135 MS.gene073515:CDS 50.0%
! TGAGCATTGCAGGGAACCAT+AGG - chr4.1:76699115-76699134 MS.gene073515:CDS 50.0%
!! AAGACATACAAGAGCGCTCC+AGG - chr4.1:76697244-76697263 MS.gene073515:CDS 50.0%
!! AAGAGCGCTCCAGGAGAAAA+TGG - chr4.1:76697253-76697272 MS.gene073515:CDS 50.0%
!!! ACGCTCTGGTTTTTAGGGGA+AGG + chr4.1:76697826-76697845 None:intergenic 50.0%
!!! CGCTCTGGTTTTTAGGGGAA+GGG + chr4.1:76697825-76697844 None:intergenic 50.0%
!!! GCTCTGGTTTTTAGGGGAAG+GGG + chr4.1:76697824-76697843 None:intergenic 50.0%
AGACGCCTTGGTTAGTGGAG+TGG - chr4.1:76699454-76699473 MS.gene073515:CDS 55.0%
GAGGCCACAGTCATGGACAA+AGG - chr4.1:76696743-76696762 MS.gene073515:intron 55.0%
GGAACAGTAACCCCAAGTCG+GGG - chr4.1:76699535-76699554 MS.gene073515:intron 55.0%
TAACCCCAAGTCGGGGCTAA+GGG - chr4.1:76699542-76699561 MS.gene073515:intron 55.0%
! GGTAGTGGCCCTTGAAAACC+AGG + chr4.1:76695247-76695266 None:intergenic 55.0%
! TGGTCTTGAGGCCACAGTCA+TGG - chr4.1:76696736-76696755 MS.gene073515:intron 55.0%
!! GCGTGCCTAGTTTGGTCTTG+AGG - chr4.1:76696724-76696743 MS.gene073515:intron 55.0%
AACCCCAAGTCGGGGCTAAG+GGG - chr4.1:76699543-76699562 MS.gene073515:intron 60.0%
GTAACCCCAAGTCGGGGCTA+AGG - chr4.1:76699541-76699560 MS.gene073515:intron 60.0%
GTGACGATGATCCGCGTCTG+TGG - chr4.1:76698711-76698730 MS.gene073515:intron 60.0%
TCACGGATCATCGGAGCGAC+TGG - chr4.1:76697060-76697079 MS.gene073515:intron 60.0%
! GGAGCAGCGGACTTGAGGTT+GGG + chr4.1:76699625-76699644 None:intergenic 60.0%
! TGGAGCAGCGGACTTGAGGT+TGG + chr4.1:76699626-76699645 None:intergenic 60.0%
AGGCCCCTTAGCCCCGACTT+GGG + chr4.1:76699549-76699568 None:intergenic 65.0%
AGTCGGGGCTAAGGGGCCTA+AGG - chr4.1:76699550-76699569 MS.gene073515:intron 65.0%
GTCGGGGCTAAGGGGCCTAA+GGG - chr4.1:76699551-76699570 MS.gene073515:intron 65.0%
TAGGCCCCTTAGCCCCGACT+TGG + chr4.1:76699550-76699569 None:intergenic 65.0%
! CGACGGGAGCGTGCCTAGTT+TGG - chr4.1:76696716-76696735 MS.gene073515:intron 65.0%
! GGCCCCTTAGCCCCGACTTG+GGG + chr4.1:76699548-76699567 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 76695112 76701062 76695112 ID=MS.gene073515
chr4.1 mRNA 76695112 76701062 76695112 ID=MS.gene073515.t1;Parent=MS.gene073515
chr4.1 exon 76700890 76701062 76700890 ID=MS.gene073515.t1.exon1;Parent=MS.gene073515.t1
chr4.1 CDS 76700890 76701062 76700890 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76700317 76700465 76700317 ID=MS.gene073515.t1.exon2;Parent=MS.gene073515.t1
chr4.1 CDS 76700317 76700465 76700317 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76699410 76699486 76699410 ID=MS.gene073515.t1.exon3;Parent=MS.gene073515.t1
chr4.1 CDS 76699410 76699486 76699410 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76699056 76699175 76699056 ID=MS.gene073515.t1.exon4;Parent=MS.gene073515.t1
chr4.1 CDS 76699056 76699175 76699056 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76698570 76698672 76698570 ID=MS.gene073515.t1.exon5;Parent=MS.gene073515.t1
chr4.1 CDS 76698570 76698672 76698570 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76698245 76698282 76698245 ID=MS.gene073515.t1.exon6;Parent=MS.gene073515.t1
chr4.1 CDS 76698245 76698282 76698245 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76698004 76698102 76698004 ID=MS.gene073515.t1.exon7;Parent=MS.gene073515.t1
chr4.1 CDS 76698004 76698102 76698004 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76697805 76697891 76697805 ID=MS.gene073515.t1.exon8;Parent=MS.gene073515.t1
chr4.1 CDS 76697805 76697891 76697805 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76697369 76697506 76697369 ID=MS.gene073515.t1.exon9;Parent=MS.gene073515.t1
chr4.1 CDS 76697369 76697506 76697369 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76697214 76697285 76697214 ID=MS.gene073515.t1.exon10;Parent=MS.gene073515.t1
chr4.1 CDS 76697214 76697285 76697214 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76696932 76697047 76696932 ID=MS.gene073515.t1.exon11;Parent=MS.gene073515.t1
chr4.1 CDS 76696932 76697047 76696932 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76695992 76696105 76695992 ID=MS.gene073515.t1.exon12;Parent=MS.gene073515.t1
chr4.1 CDS 76695992 76696105 76695992 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76695333 76695378 76695333 ID=MS.gene073515.t1.exon13;Parent=MS.gene073515.t1
chr4.1 CDS 76695333 76695378 76695333 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
chr4.1 exon 76695112 76695195 76695112 ID=MS.gene073515.t1.exon14;Parent=MS.gene073515.t1
chr4.1 CDS 76695112 76695195 76695112 ID=cds.MS.gene073515.t1;Parent=MS.gene073515.t1
Gene Sequence

>MS.gene073515

ATGAACATGATGGCTCCTCCTTCTCATAATTCACTTCACTATTGTTGTTGTCAGATACTACTAGCTCTTGGACTATTTAGTTTGAATATGTTAACTCATATTGAAGCTTATGGCTCAAAGGTTGAACAACTTCCTGGTTTTCAAGGGCCACTACCTTTTGAACTTGAAACTGGGTCAGCAATCTTAACCATTCCATTTTCTGTTACAAATTCACTTTTTTTTTTCTTTTCTATTTTAGGACATTAAACTTTAATTTAATTAGTTTAGATAACTTGTTTAATTTAATAGTTTATAAAGAATGACACTCCTCAAGGTTTAGTTTAGCAAGAAAGAGTTAAACTCAATTTAAAAAGAATTAATTTTTTTTTTTTTTGTGTTGACATAGTAATGCATAGTTCGTCGGTGGTAAGTAAGGTCTGACTAAAAAGTGTTTCATGTAGGATTCAACTCGGGTTCTTCTGAACAATTCATCATTAGTGTAGTTCATTAACCGCTTGAACTCAATCATTTGTTGATATACAATAATTTTACACTGAAATTCGATGAGACTCTTGCAGTGTGTCAAGTAATGTAGTTGTGTGTTCATATATTTGATAGGTACGTGGGGTTAGGGGAAACAGATGATGACATGCAAGTATTCTACTATTTTATCAAATCAGAAAATGATCCTCAGAAAGATCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGCTGTTCTTCTTTTTCTGGACTTGCCTATCAAATAGGTAATTTTCAAATCACAACTTTATTTTTTGTGAATCTTGATTTTGACAGTTTGTTAATACATAATTGGATATGTATAACACACATGGATTGTTTTTCTGGTCACAAAACGATGTGTTTAAATTATCTTATTTGAGCTTATCTTCTGACATAAGCATTTGTGAGTCGAATTACGAGAGGTTATCATCTGCATCCTTTTTAGATAGTTTCAAAAAGTGTACTAAGGTCACTATTGAAAATATGAATCATGATTTGAAGCAGATGTTCAATTGTAGATGTGGCTGCATTTGGAGTAAAAAATCAAACATGTTACATTTATCAGATTTAAATACAATCATATAATAGCCAGTTAGTATAGATTTTGTATCATGCAGATTCATTTTGCAGTGAAATGTGGGCACCAATTTTCTAATCAATACGAACCATAATGTATATCTATTTTGGAATTGAATCTTATATTGATTCCTGATTTATTATGTTGTATCCCGATTGACTATGATGATCTCGATTCATTCAAATGAATAGCTACCTAACCTTAGTTTAGTCGGTCAATTTTCTTTTTTTTTCATCTTGTATAGTCCATCACTTTTCTTTTATTAGGTTATAATTTAACTCTGTCACTTGTTTTTACCAAAAAAATATATAATAAGATTCAACTGACAGTCCACAAAATAGTTCTTCTCATTCACGATATGAATCTCGATGTGATAACCATGATTTGGCTATTTTCTTGTGTTTGGTTTAGCTTATCAGTAGAATTGATCCTACTGAAATTGATCCACTCAACAACATTCATAGAGTGACTTTGTCATCATCAATTGAATGTTAATAGGTCCAATTGCATTTGAAATCAAGGAGTACGACGGGAGCGTGCCTAGTTTGGTCTTGAGGCCACAGTCATGGACAAAGGTGTTGATAACACCTAAATAATTCAACATTGATTTCATTTACTTAAGTTAATACAAAATTTGTACCAATAAGAACTATGATTTATATAAGTCATGTCATGTGATTATAATATGTATATAGTTTTTGTTGAGATAGCTGTACAAGTCTAAATATTCATTCTTAATATGTTTATTTTCATGATTTCATTATTGGAAGGTGATTTACCGGTAGTAATGTTAATGATCTTTTGGTCAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCACGGATCATCGGAGCGACTGGAAACTAGTTCACCATACTCTTCAATTTCTTAGGAAGGTAAGTTCATTATGCTAACTAGGGTGCAGAAGGGCACTGACGTGCTCGATAGAGTTTCTTCCACATCTTCAGACTTTTTCTTTGAAACTGCTAAAAAATTTATTCAACACCGCAACTCTATGCACAAGACATACAAGAGCGCTCCAGGAGAAAATGGAGAATATAGTTGCTGCGACTAAAGACTGTGTGTTAATTTTTCTCATGATGAAGGCCGACTATGATCTTCATTTACGAAAACTGGTCTATGTTACCGTTGTCATATTTCTTGTCACGCTTTCCTATTTCTCTTTGTTTAATATTTACTTTAGGAGAATCATCTCCTAACTATGACTCAAAATTCGATCATTTTCTTATCAGCTGAAACAATTATCTGTATTGTATAGTGGCTGATCGATCACTCTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCAGGCATTCCTGTCCCAGCCATTCTTCAAGAAATTTCAAATGGTTAGAAATCCTAAAATGCTCAATATTTCAGATGGATTAATCTTTAAGTAATGCTAAATTTCTTTATAATTATAATTCCAATGAGGCTGAAATTTTCTAAATCATTTTAATTAGTCCCCCTCACTCTAATAAATTGATTATTTGCATTCTCCTATGGCAATAAGCAAAGCAAAGCAAAAATTTAGTATAAACTGACTTGATTCGGATTATCAGTGTCCCCTTCCCCTAAAAACCAGAGCGTAAAGACTTCAAAACGATTGATCTTTTTCCATTTCTTTGATTAACAGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTCAAGGTTTCAAACCATCATCTCTGTCAGTTGCTTCTATTACCGATGAACAAAAAATCTAAATAGGGATTTTGAAACCGAAACTACCTTTGTTCCATCGATCTTGTTATATGCATTATGAAGCCTAAACCAGTCTCAATATTTTCAGGGATATCTGCTAGGGAACCCTATAACAACACACAGAGAAAAAAATTATCAAATCCCATTTACTCATGGAATGGGAATCATTTCTGATGAACTCTACGCGGTATTATTATCCTTATTATTCTTCAGTAAAGCTATACATACATTGTACTTTCCTGTTGGTTACAATGATGATGTGTTTTACTTGATGGTCTACTGTTATCTATTGGCAACAGTCACTGCAGAGAAACTGTAAAAGAGAGTATGTTGATGTAGATTCCAGAAATGAGTTGTGTTTAAGAGATCTCCGATCCTATGATGAGGCAAGTAAACCGTTCCATTCCAATTTTATCTATACCTATTATTAAGATGATACTAAAGTTTTGGTGTGGTCTTGAGGAAGAGTAACATTTTCAACAGTAGCTACTTAATCATGGACATAGTCACATTAGAAGAAAAAGATAAGAAGAGAGAAAACAAAAATGAAGTAGAACAAAGAAAATAATAAGGGAAGAGAAATGAGAGACTGGTAAAGATGGTGTCTGTAAGCATGTTAATCATGATAGTTAAGATGTTAATTGTTTGCCATATTGTTAAACTATTATTTCTTCTTATCATCAGTGCCTTTCAGGACTTGATCTGTTCCACATTTTGGATCGTTTTTGTGACGATGATCCGCGTCTGTGGAGAAGATCTTTGACTCAGGAGTTGAAGGAATCTCTTATTTCTCGTCTCACAGTGCCCGAACTAAACTGCCAAGTAAACTTTTCATAACTTAACGCATAATTTTTGTCCATAAAATGTTTCAAATGTGATGTTTCTCATTTTCATTATTGCTGTAGTTTTATAGTTTTTACCTCAGCACAAAATGGGCTAACGATGAGCGTGTTCGCAAGGCATTGCATATTCGAGAGGTTTGATATGATAAACTTATAAACTCCTCATATTAAACTGGAAACAGATACTTAAGTCTATGTTACATTACAAATGTTTTTGAATTTGAGTTGAATGCATCAAAGAAGTCTCAACAACTAATGGATATCAATATCATATTGATGTACATAGTTTTGAGCATTGCAGGGAACCATAGGGAAATGGGAACGTTGTTACTCTAATGATTTTGAGAATGAGATCCTTGGTAGCTTTGAGTTTCATGTATATCTAAGCAAAAAAGGATACCGCTCTTTGATTTACAGGTGAAGATTTTCTCTTTTAATCTAGTGTTTTTTTCTTTTTTAAACTCGTGTTGTCACCATATGTATGTAGTGTTTTTCTTGGATTAAGCTCATCTAAAGTGAGCATTTTGCTTTAGAAGGTGGTCGGAACTCAAGTCTATTGCACCGTTTTTCGGAGGTATTTTTCACTTTGGGTCTTGTGTAAGCCCTAGCAGTTTCGCCATTAGTTGAAAGACGCCTTGGTTAGTGGAGTGGTTTGTAGAAAGTACTCTTAATTTCAATTTCGAAGCAATATGAGATTTCTTGGTGTACTGGAACAGTAACCCCAAGTCGGGGCTAAGGGGCCTAAGGGCTTACTAGCTATTTTTTGTGGCTTTGGCCCCCCATCTAACACTAATGTCCCAACCTCAAGTCCGCTGCTCCAATTTTCTGAAGTTTTGACCGCTTTAGTTCTTGTGTAAGTCGTCACAGTTTTGTTCTTAGTTAAACAGCGCCACAGTGGACTGAAGAACATAGGTGTTTATAAAGCAATGTAGTTGGGATTTTTACCTATCAGAACTTTTTACTATGCAACGTAGAATTTTTTTGCCTATCAGAACAGAAGGTGAAGAAAGTAATCTCAACTGTTAATAAGAAAATCAATGGTTAATATTTGAATACATTCATTAAATTACTATGCATGTCCCGGTAACATCAACAATTGATTTATTCATCACAGTTAAGATTACTTGTTTTACACTCTAAAGTGAATTGTCCACTTTTGAAGAGCGAGAATCGTTTTCTTCTAGCTTTCTTGATGACATTAAGGCTAGCTGATTTGTTATGACAATTGATGTGTTGTTGGCAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCTACTCAAGCTTGGATTAGGAATCTAAACTACTCCATTGTAGATGATTGGAGGCCATGGTTTGTAAATGGTCAAGTGGGAGGGTAAGCATCAAATTTAAATATGTAAATGGTGCACCAGTCAAAATAGTCCTTCATTTTTGAGAATTAGACAATTTATCCCAAAAATTGTAAAATGTCTTTCAAAATGACCTTTTTGTTAACTTCTTCTGTTAGAGGCTATGAAGTTGTATGTTACTGAACATGTTACACTGAACATTGTTCCCACATCAATTTCAGTTCATTAGGGACTAATTTTCCTAGGAAATTTGGGTCATCATAGAGATAAGTTGTTAGTAATTGCAATTGTGCAAAACTAATTATTGGAAAATTTGGCCCTAAGAACCCTAAATTTCATAGGCGAAGTAGTCTATGGTTTGGTGGCAATGATGTGTAATCAACGTGAAGGGAGTGTGTATTCACTTAACAGATTAACTATTTTGACTAATACTTTGTAATTTCAGGAATGTATTTGCCAGTTCGCAAAAATCATAGACTATTTTGACAGTTATTTATAATTTCAACAACTAATTTGTCTATTCACTCTTTCTTCCAATCCTATTTTTCTATAATTTTTTTATATGTATTTCATTTAGTGCCTAGAACATAATAAGACACCTTGTATCCTAATCTAAATCAACAATTTCCTTTCATGCAGATACACAAGGACATACTCGAATCGAATGACTTTTGCAACCGTGAAGGTAAGAACATCGCTGATTAAATAGCAAATGTTCTATTTTGTTCTTTTAAGAATAACACTCAATTTGGTGAAATATTTAATTGTCTATAAAGGGATTATGCAAATTCATTATATTAATTTTTGCTTAATTAATTGCAGGGTTCAGGACATACAGCTCCTGAGTACACTCCTGAGCAATGTTTTGCCATGTTCACTAGGTGGATATCTAATTTGCCTTTGTAA
Protein sequence

>MS.gene073515.t1

MNMMAPPSHNSLHYCCCQILLALGLFSLNMLTHIEAYGSKVEQLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENDPQKDPLMLWLTGGPGCSSFSGLAYQIGPIAFEIKEYDGSVPSLVLRPQSWTKLCSIIFVDLPLGTGFSYAKNVTDHRSDWKLVHHTLQFLRKWLIDHSEFLSNEFYIGADSYSGIPVPAILQEISNGNEKGLQPLINLKGYLLGNPITTHREKNYQIPFTHGMGIISDELYASLQRNCKREYVDVDSRNELCLRDLRSYDECLSGLDLFHILDRFCDDDPRLWRRSLTQELKESLISRLTVPELNCQFYSFYLSTKWANDERVRKALHIREGTIGKWERCYSNDFENEILGSFEFHVYLSKKGYRSLIYSGDHDAVVPFMSTQAWIRNLNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHTAPEYTPEQCFAMFTRWISNLPL