Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07636.t1 | RHN68036.1 | 84.6 | 247 | 35 | 1 | 1 | 244 | 17 | 263 | 3.10E-116 | 427.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07636.t1 | G7J785 | 84.6 | 247 | 35 | 1 | 1 | 244 | 1 | 247 | 2.2e-116 | 427.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene07636 | 0.82756 | 1.46E-54 | -1.69E-46 |
| MS.gene049656 | MS.gene07636 | 0.919471 | 4.32E-87 | -1.69E-46 |
| MS.gene049657 | MS.gene07636 | 0.997633 | 3.88E-246 | -1.69E-46 |
| MS.gene050170 | MS.gene07636 | 0.845971 | 2.91E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene07636 | 0.824578 | 7.48E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene07636 | 0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene07636 | 0.814011 | 1.91E-51 | -1.69E-46 |
| MS.gene050697 | MS.gene07636 | 0.800697 | 1.28E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene07636 | 0.812715 | 3.69E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene07636 | 0.812287 | 4.57E-51 | -1.69E-46 |
| MS.gene052066 | MS.gene07636 | 0.833081 | 6.54E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene07636 | 0.810899 | 9.16E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene07636 | 0.830666 | 2.58E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene07636 | 0.808549 | 2.93E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene07636 | 0.801726 | 7.86E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene07636 | 0.826835 | 2.18E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene07636 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene07636 | 0.839726 | 1.33E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene07636 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene056878 | MS.gene07636 | 0.851909 | 6.53E-61 | -1.69E-46 |
| MS.gene058157 | MS.gene07636 | 0.811262 | 7.64E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene07636 | 0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene07636 | 0.823488 | 1.35E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene07636 | 0.810598 | 1.06E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene07636 | 0.817533 | 3.14E-52 | -1.69E-46 |
| MS.gene05996 | MS.gene07636 | 0.841643 | 4.20E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene07636 | 0.809572 | 1.77E-50 | -1.69E-46 |
| MS.gene060187 | MS.gene07636 | -0.823524 | 1.32E-53 | -1.69E-46 |
| MS.gene060339 | MS.gene07636 | 0.840772 | 7.11E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene07636 | -0.835744 | 1.40E-56 | -1.69E-46 |
| MS.gene060778 | MS.gene07636 | 0.818582 | 1.82E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene07636 | 0.827437 | 1.57E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene07636 | 0.829455 | 5.10E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07636.t1 | MTR_3g064020 | 84.615 | 247 | 35 | 1 | 1 | 244 | 1 | 247 | 3.40e-155 | 431 |
| MS.gene07636.t1 | MTR_5g076250 | 62.500 | 248 | 77 | 6 | 1 | 239 | 1 | 241 | 1.32e-95 | 280 |
| MS.gene07636.t1 | MTR_3g063990 | 54.980 | 251 | 71 | 4 | 9 | 221 | 3 | 249 | 8.25e-84 | 251 |
| MS.gene07636.t1 | MTR_1g057650 | 51.653 | 242 | 103 | 6 | 1 | 236 | 1 | 234 | 1.01e-73 | 225 |
| MS.gene07636.t1 | MTR_7g117750 | 43.983 | 241 | 121 | 5 | 1 | 236 | 1 | 232 | 1.74e-60 | 191 |
| MS.gene07636.t1 | MTR_3g063980 | 56.164 | 73 | 28 | 1 | 167 | 239 | 56 | 124 | 2.01e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07636.t1 | AT3G02700 | 57.917 | 240 | 89 | 6 | 1 | 236 | 1 | 232 | 3.14e-81 | 244 |
| MS.gene07636.t1 | AT5G06370 | 50.826 | 242 | 105 | 6 | 1 | 236 | 1 | 234 | 8.77e-74 | 225 |
| MS.gene07636.t1 | AT5G16360 | 47.101 | 276 | 96 | 8 | 1 | 236 | 1 | 266 | 5.11e-70 | 216 |
| MS.gene07636.t1 | AT4G00905 | 45.714 | 245 | 120 | 5 | 1 | 236 | 1 | 241 | 5.87e-63 | 197 |
| MS.gene07636.t1 | AT5G16330 | 47.325 | 243 | 98 | 8 | 1 | 236 | 9 | 228 | 7.72e-62 | 194 |
| MS.gene07636.t1 | AT1G01225 | 47.391 | 230 | 112 | 3 | 1 | 226 | 1 | 225 | 1.82e-61 | 194 |
Find 56 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTAGATTGCTTTCTTTC+AGG | 0.124117 | 3.2:+59580642 | MS.gene07636:CDS |
| GCTTTATATCTTCTTGAAAA+TGG | 0.152944 | 3.2:+59580780 | MS.gene07636:CDS |
| AAAAGATTGGTTTCTGATAT+TGG | 0.189791 | 3.2:+59581008 | MS.gene07636:CDS |
| ATGTTTCCGATCAGTCTTAT+TGG | 0.247318 | 3.2:-59580232 | None:intergenic |
| CACAGTTATTCTTGAAGATA+TGG | 0.269187 | 3.2:-59580815 | None:intergenic |
| TATCTTCTTGAAAATGGATT+TGG | 0.299009 | 3.2:+59580786 | MS.gene07636:CDS |
| TTTGCAGTTTATTGCAAAAC+AGG | 0.337490 | 3.2:+59580843 | MS.gene07636:CDS |
| TGCATGTGCCTCCTCTAGCT+TGG | 0.338272 | 3.2:-59580716 | None:intergenic |
| CCGCACCGTCACGACATCTT+TGG | 0.342473 | 3.2:-59580590 | None:intergenic |
| GAACTCTACCTCTTTCAATA+TGG | 0.373949 | 3.2:+59580669 | MS.gene07636:CDS |
| AACTTACTGCATTAAAAGAT+TGG | 0.377765 | 3.2:+59580995 | MS.gene07636:CDS |
| ATGGTGATCCATTTCACAAT+TGG | 0.385236 | 3.2:+59580489 | MS.gene07636:CDS |
| CTGGGGATCATATTTACTCT+TGG | 0.413378 | 3.2:+59580262 | MS.gene07636:CDS |
| CTTCCATCCATGGTCAAATC+AGG | 0.416092 | 3.2:-59581083 | None:intergenic |
| GCATGTGCCTCCTCTAGCTT+GGG | 0.419205 | 3.2:-59580715 | None:intergenic |
| CACATGCACCCTAGCTGCTT+CGG | 0.423293 | 3.2:+59580731 | MS.gene07636:CDS |
| ATCCATTTCACAATTGGATC+AGG | 0.464773 | 3.2:+59580495 | MS.gene07636:CDS |
| ATCGGAAACATCTAAAACCT+GGG | 0.479101 | 3.2:+59580244 | MS.gene07636:CDS |
| GGGATCATATTTACTCTTGG+AGG | 0.483005 | 3.2:+59580265 | MS.gene07636:CDS |
| ACAGGAATATATGTTGAAGA+TGG | 0.483154 | 3.2:+59580465 | MS.gene07636:intron |
| GTCCTGATCCAATTGTGAAA+TGG | 0.487607 | 3.2:-59580497 | None:intergenic |
| GGATCAGGACAGCAAGCTGC+TGG | 0.487944 | 3.2:+59580510 | MS.gene07636:CDS |
| CGAAAGAACTTGTAAAGAAA+CGG | 0.498819 | 3.2:-59580551 | None:intergenic |
| TCATATTTACTCTTGGAGGC+AGG | 0.503930 | 3.2:+59580269 | MS.gene07636:CDS |
| ATACCTGATTTGACCATGGA+TGG | 0.505525 | 3.2:+59581080 | MS.gene07636:CDS |
| GCTGGCAGCAGCTGAATAAG+AGG | 0.511661 | 3.2:-59580904 | None:intergenic |
| TGAAAGAAAGCAATCTAAGC+AGG | 0.512899 | 3.2:-59580640 | None:intergenic |
| ACATCTTTGGCATGGAATGT+TGG | 0.518788 | 3.2:-59580577 | None:intergenic |
| TTCAAGAAGATATAAAGCAC+GGG | 0.519285 | 3.2:-59580775 | None:intergenic |
| TGGAGACACCATATTGAAAG+AGG | 0.529495 | 3.2:-59580677 | None:intergenic |
| CAGTTGGATCCGAAGCAGCT+AGG | 0.530992 | 3.2:-59580740 | None:intergenic |
| AGTTGGATCCGAAGCAGCTA+GGG | 0.533238 | 3.2:-59580739 | None:intergenic |
| GTCGTGACGGTGCGGAAACA+AGG | 0.535193 | 3.2:+59580598 | MS.gene07636:CDS |
| AGTCTACTAGCTTCCATCCA+TGG | 0.540139 | 3.2:-59581093 | None:intergenic |
| GATCGGAAACATCTAAAACC+TGG | 0.543021 | 3.2:+59580243 | MS.gene07636:CDS |
| AAGAAACGGTATAAAATCGC+TGG | 0.543391 | 3.2:-59580537 | None:intergenic |
| TTTCAAGAAGATATAAAGCA+CGG | 0.545122 | 3.2:-59580776 | None:intergenic |
| CGGGGAAGGACCTCTTCAGT+TGG | 0.547650 | 3.2:-59580756 | None:intergenic |
| GGTAGGGCTTTGGTTTGCTG+TGG | 0.552956 | 3.2:+59580972 | MS.gene07636:CDS |
| TCAACCTCAAAAGGCTGCAG+TGG | 0.553525 | 3.2:+59580873 | MS.gene07636:CDS |
| TTAGATTGCTTTCTTTCAGG+AGG | 0.554330 | 3.2:+59580645 | MS.gene07636:CDS |
| TGCTTTCCAATAAGACTGAT+CGG | 0.558642 | 3.2:+59580226 | MS.gene07636:CDS |
| TGATGAAGAGTCTACAGTGC+TGG | 0.563974 | 3.2:-59580922 | None:intergenic |
| CAAGAGTAAATATGATCCCC+AGG | 0.568302 | 3.2:-59580261 | None:intergenic |
| CTGTAGACTCTTCATCACTT+CGG | 0.584097 | 3.2:+59580928 | MS.gene07636:CDS |
| CCGTCACGACATCTTTGGCA+TGG | 0.598030 | 3.2:-59580585 | None:intergenic |
| GAAGATATAAAGCACGGGGA+AGG | 0.600493 | 3.2:-59580770 | None:intergenic |
| AATATATGTTGAAGATGGAA+TGG | 0.601381 | 3.2:+59580470 | MS.gene07636:CDS |
| GCTTACCTCTATGCACATCA+TGG | 0.604488 | 3.2:+59580291 | MS.gene07636:CDS |
| GGTGCGGAAACAAGGACTCA+TGG | 0.614117 | 3.2:+59580606 | MS.gene07636:CDS |
| GATGACCATGATGTGCATAG+AGG | 0.641641 | 3.2:-59580296 | None:intergenic |
| TGCTTCGGATCCAACTGAAG+AGG | 0.647462 | 3.2:+59580746 | MS.gene07636:CDS |
| CCAAAGATGTCGTGACGGTG+CGG | 0.654870 | 3.2:+59580590 | MS.gene07636:CDS |
| CCATGCCAAAGATGTCGTGA+CGG | 0.658966 | 3.2:+59580585 | MS.gene07636:CDS |
| TCAAGAAGATATAAAGCACG+GGG | 0.677622 | 3.2:-59580774 | None:intergenic |
| TCGGAAACATCTAAAACCTG+GGG | 0.712111 | 3.2:+59580245 | MS.gene07636:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTGATACATAAGAAAA+TGG | - | chr3.2:59580374-59580393 | None:intergenic | 20.0% |
| ! | AACTTACTGCATTAAAAGAT+TGG | + | chr3.2:59580995-59581014 | MS.gene07636:CDS | 25.0% |
| ! | AATATATGTTGAAGATGGAA+TGG | + | chr3.2:59580470-59580489 | MS.gene07636:CDS | 25.0% |
| ! | GCTTTATATCTTCTTGAAAA+TGG | + | chr3.2:59580780-59580799 | MS.gene07636:CDS | 25.0% |
| ! | TTTCAAGAAGATATAAAGCA+CGG | - | chr3.2:59580779-59580798 | None:intergenic | 25.0% |
| !! | TATCTTCTTGAAAATGGATT+TGG | + | chr3.2:59580786-59580805 | MS.gene07636:CDS | 25.0% |
| !! | TTGTGCAAGAAAGTATAAAT+TGG | - | chr3.2:59580344-59580363 | None:intergenic | 25.0% |
| !!! | AAAAGATTGGTTTCTGATAT+TGG | + | chr3.2:59581008-59581027 | MS.gene07636:CDS | 25.0% |
| !!! | AAATCAGGTATTTTTTCAAC+TGG | - | chr3.2:59581071-59581090 | None:intergenic | 25.0% |
| ACAGGAATATATGTTGAAGA+TGG | + | chr3.2:59580465-59580484 | MS.gene07636:intron | 30.0% | |
| CACAGTTATTCTTGAAGATA+TGG | - | chr3.2:59580818-59580837 | None:intergenic | 30.0% | |
| CGAAAGAACTTGTAAAGAAA+CGG | - | chr3.2:59580554-59580573 | None:intergenic | 30.0% | |
| TCAGTATGATAGTTATGCAT+AGG | - | chr3.2:59580399-59580418 | None:intergenic | 30.0% | |
| TTCAAGAAGATATAAAGCAC+GGG | - | chr3.2:59580778-59580797 | None:intergenic | 30.0% | |
| TTGGGCTAAAAAATGTAGTT+TGG | - | chr3.2:59580700-59580719 | None:intergenic | 30.0% | |
| TTTGCAGTTTATTGCAAAAC+AGG | + | chr3.2:59580843-59580862 | MS.gene07636:CDS | 30.0% | |
| ! | AAAAATACCTGATTTGACCA+TGG | + | chr3.2:59581076-59581095 | MS.gene07636:CDS | 30.0% |
| AAGAAACGGTATAAAATCGC+TGG | - | chr3.2:59580540-59580559 | None:intergenic | 35.0% | |
| ATCCATTTCACAATTGGATC+AGG | + | chr3.2:59580495-59580514 | MS.gene07636:CDS | 35.0% | |
| ATGGTGATCCATTTCACAAT+TGG | + | chr3.2:59580489-59580508 | MS.gene07636:CDS | 35.0% | |
| CGGCATTTCTGTAATATAAC+AGG | + | chr3.2:59580447-59580466 | MS.gene07636:intron | 35.0% | |
| GAACTCTACCTCTTTCAATA+TGG | + | chr3.2:59580669-59580688 | MS.gene07636:CDS | 35.0% | |
| TCAAGAAGATATAAAGCACG+GGG | - | chr3.2:59580777-59580796 | None:intergenic | 35.0% | |
| TCATATTTGTGTCCTGCTAA+CGG | + | chr3.2:59580427-59580446 | MS.gene07636:intron | 35.0% | |
| TGAAAGAAAGCAATCTAAGC+AGG | - | chr3.2:59580643-59580662 | None:intergenic | 35.0% | |
| TGCTTAGATTGCTTTCTTTC+AGG | + | chr3.2:59580642-59580661 | MS.gene07636:CDS | 35.0% | |
| TGCTTTCCAATAAGACTGAT+CGG | + | chr3.2:59580226-59580245 | MS.gene07636:CDS | 35.0% | |
| TTAGATTGCTTTCTTTCAGG+AGG | + | chr3.2:59580645-59580664 | MS.gene07636:CDS | 35.0% | |
| ! | ATCGGAAACATCTAAAACCT+GGG | + | chr3.2:59580244-59580263 | MS.gene07636:CDS | 35.0% |
| ! | ATGTTTCCGATCAGTCTTAT+TGG | - | chr3.2:59580235-59580254 | None:intergenic | 35.0% |
| ! | TTTGTGAACTCCAGTCTTTT+TGG | + | chr3.2:59580951-59580970 | MS.gene07636:CDS | 35.0% |
| !!! | GGTCTTTTTTCAACCTCAAA+AGG | + | chr3.2:59580864-59580883 | MS.gene07636:CDS | 35.0% |
| ACATCTTTGGCATGGAATGT+TGG | - | chr3.2:59580580-59580599 | None:intergenic | 40.0% | |
| ATTACAGAAATGCCGTTAGC+AGG | - | chr3.2:59580442-59580461 | None:intergenic | 40.0% | |
| CAAGAGTAAATATGATCCCC+AGG | - | chr3.2:59580264-59580283 | None:intergenic | 40.0% | |
| CTGGGGATCATATTTACTCT+TGG | + | chr3.2:59580262-59580281 | MS.gene07636:CDS | 40.0% | |
| CTGTAGACTCTTCATCACTT+CGG | + | chr3.2:59580928-59580947 | MS.gene07636:CDS | 40.0% | |
| GGGATCATATTTACTCTTGG+AGG | + | chr3.2:59580265-59580284 | MS.gene07636:CDS | 40.0% | |
| GTCCTGATCCAATTGTGAAA+TGG | - | chr3.2:59580500-59580519 | None:intergenic | 40.0% | |
| TCATATTTACTCTTGGAGGC+AGG | + | chr3.2:59580269-59580288 | MS.gene07636:CDS | 40.0% | |
| TGGAGACACCATATTGAAAG+AGG | - | chr3.2:59580680-59580699 | None:intergenic | 40.0% | |
| ! | ATACCTGATTTGACCATGGA+TGG | + | chr3.2:59581080-59581099 | MS.gene07636:CDS | 40.0% |
| ! | GATCGGAAACATCTAAAACC+TGG | + | chr3.2:59580243-59580262 | MS.gene07636:CDS | 40.0% |
| ! | TCGGAAACATCTAAAACCTG+GGG | + | chr3.2:59580245-59580264 | MS.gene07636:CDS | 40.0% |
| !! | GAACTCCAGTCTTTTTGGTA+GGG | + | chr3.2:59580956-59580975 | MS.gene07636:CDS | 40.0% |
| !! | TGAACTCCAGTCTTTTTGGT+AGG | + | chr3.2:59580955-59580974 | MS.gene07636:CDS | 40.0% |
| !!! | CATTTTTTAGCCCAAGCTAG+AGG | + | chr3.2:59580705-59580724 | MS.gene07636:CDS | 40.0% |
| CAAAGCCCTACCAAAAAGAC+TGG | - | chr3.2:59580964-59580983 | None:intergenic | 45.0% | |
| CTTCCATCCATGGTCAAATC+AGG | - | chr3.2:59581086-59581105 | None:intergenic | 45.0% | |
| GAAGATATAAAGCACGGGGA+AGG | - | chr3.2:59580773-59580792 | None:intergenic | 45.0% | |
| GATGACCATGATGTGCATAG+AGG | - | chr3.2:59580299-59580318 | None:intergenic | 45.0% | |
| GCTTACCTCTATGCACATCA+TGG | + | chr3.2:59580291-59580310 | MS.gene07636:CDS | 45.0% | |
| TGATGAAGAGTCTACAGTGC+TGG | - | chr3.2:59580925-59580944 | None:intergenic | 45.0% | |
| !! | CAGTCTTTTTGGTAGGGCTT+TGG | + | chr3.2:59580962-59580981 | MS.gene07636:CDS | 45.0% |
| !! | TTTTTAGCCCAAGCTAGAGG+AGG | + | chr3.2:59580708-59580727 | MS.gene07636:CDS | 45.0% |
| AGTTGGATCCGAAGCAGCTA+GGG | - | chr3.2:59580742-59580761 | None:intergenic | 50.0% | |
| CCATGCCAAAGATGTCGTGA+CGG | + | chr3.2:59580585-59580604 | MS.gene07636:CDS | 50.0% | |
| TCAACCTCAAAAGGCTGCAG+TGG | + | chr3.2:59580873-59580892 | MS.gene07636:CDS | 50.0% | |
| TGCTTCGGATCCAACTGAAG+AGG | + | chr3.2:59580746-59580765 | MS.gene07636:CDS | 50.0% | |
| ! | TTGACCACTGCAGCCTTTTG+AGG | - | chr3.2:59580880-59580899 | None:intergenic | 50.0% |
| CACATGCACCCTAGCTGCTT+CGG | + | chr3.2:59580731-59580750 | MS.gene07636:CDS | 55.0% | |
| CAGTTGGATCCGAAGCAGCT+AGG | - | chr3.2:59580743-59580762 | None:intergenic | 55.0% | |
| CCAAAGATGTCGTGACGGTG+CGG | + | chr3.2:59580590-59580609 | MS.gene07636:CDS | 55.0% | |
| CCGTCACGACATCTTTGGCA+TGG | - | chr3.2:59580588-59580607 | None:intergenic | 55.0% | |
| GCTGGCAGCAGCTGAATAAG+AGG | - | chr3.2:59580907-59580926 | None:intergenic | 55.0% | |
| GGTGCGGAAACAAGGACTCA+TGG | + | chr3.2:59580606-59580625 | MS.gene07636:CDS | 55.0% | |
| TGCATGTGCCTCCTCTAGCT+TGG | - | chr3.2:59580719-59580738 | None:intergenic | 55.0% | |
| ! | GCATGTGCCTCCTCTAGCTT+GGG | - | chr3.2:59580718-59580737 | None:intergenic | 55.0% |
| !! | GGTAGGGCTTTGGTTTGCTG+TGG | + | chr3.2:59580972-59580991 | MS.gene07636:CDS | 55.0% |
| CCGCACCGTCACGACATCTT+TGG | - | chr3.2:59580593-59580612 | None:intergenic | 60.0% | |
| CGGGGAAGGACCTCTTCAGT+TGG | - | chr3.2:59580759-59580778 | None:intergenic | 60.0% | |
| GGATCAGGACAGCAAGCTGC+TGG | + | chr3.2:59580510-59580529 | MS.gene07636:CDS | 60.0% | |
| GTCGTGACGGTGCGGAAACA+AGG | + | chr3.2:59580598-59580617 | MS.gene07636:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 59580219 | 59581109 | 59580219 | ID=MS.gene07636 |
| chr3.2 | mRNA | 59580219 | 59581109 | 59580219 | ID=MS.gene07636.t1;Parent=MS.gene07636 |
| chr3.2 | exon | 59580219 | 59580312 | 59580219 | ID=MS.gene07636.t1.exon1;Parent=MS.gene07636.t1 |
| chr3.2 | CDS | 59580219 | 59580312 | 59580219 | ID=cds.MS.gene07636.t1;Parent=MS.gene07636.t1 |
| chr3.2 | exon | 59580469 | 59581109 | 59580469 | ID=MS.gene07636.t1.exon2;Parent=MS.gene07636.t1 |
| chr3.2 | CDS | 59580469 | 59581109 | 59580469 | ID=cds.MS.gene07636.t1;Parent=MS.gene07636.t1 |
| Gene Sequence |
| Protein sequence |
