Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08211.t1 | XP_013449494.1 | 98.4 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 1.00E-275 | 958.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08211.t1 | Q84XA3 | 77.3 | 502 | 114 | 0 | 1 | 502 | 1 | 502 | 1.4e-217 | 756.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08211.t1 | G7KZG9 | 98.4 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 7.4e-276 | 958.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08211 | MS.gene53517 | PPI |
| MS.gene08211 | MS.gene060923 | PPI |
| MS.gene08211 | MS.gene069038 | PPI |
| MS.gene08211 | MS.gene031378 | PPI |
| MS.gene05640 | MS.gene08211 | PPI |
| MS.gene08211 | MS.gene059880 | PPI |
| MS.gene08211 | MS.gene99779 | PPI |
| MS.gene08211 | MS.gene053443 | PPI |
| MS.gene08211 | MS.gene23437 | PPI |
| MS.gene08211 | MS.gene018651 | PPI |
| MS.gene08211 | MS.gene90360 | PPI |
| MS.gene08211 | MS.gene073888 | PPI |
| MS.gene08211 | MS.gene04079 | PPI |
| MS.gene08211 | MS.gene77392 | PPI |
| MS.gene08211 | MS.gene95644 | PPI |
| MS.gene08211 | MS.gene04418 | PPI |
| MS.gene08211 | MS.gene000480 | PPI |
| MS.gene08211 | MS.gene08109 | PPI |
| MS.gene08211 | MS.gene96949 | PPI |
| MS.gene08211 | MS.gene035194 | PPI |
| MS.gene08211 | MS.gene059878 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08211.t1 | MTR_7g085560 | 98.406 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1007 |
| MS.gene08211.t1 | MTR_7g085560 | 98.406 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1007 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08211.t1 | AT1G16350 | 72.200 | 500 | 133 | 3 | 8 | 502 | 4 | 502 | 0.0 | 718 |
| MS.gene08211.t1 | AT1G79470 | 69.522 | 502 | 144 | 5 | 8 | 502 | 4 | 503 | 0.0 | 699 |
Find 169 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACTGCTTGCATGGTATA+TGG | 0.277853 | 7.3:+23029196 | None:intergenic |
| TATCCTGAGTTAGATGTTAT+TGG | 0.295671 | 7.3:-23030762 | MS.gene08211:CDS |
| CGTGAGAGTTTCCGATTATA+TGG | 0.304251 | 7.3:-23031129 | MS.gene08211:CDS |
| TAAGGAGAGGTTAGAGCATT+TGG | 0.304384 | 7.3:-23030874 | MS.gene08211:CDS |
| CACAGAACCCTTGTCTTTAA+CGG | 0.321519 | 7.3:+23029231 | None:intergenic |
| GATTCTGTTACTAAAATAAA+AGG | 0.335337 | 7.3:+23031221 | None:intergenic |
| GGATGAAGAGGTGGTGGATT+TGG | 0.350172 | 7.3:-23031012 | MS.gene08211:CDS |
| AGGGAATTCTATTTATCAAT+TGG | 0.351573 | 7.3:-23030811 | MS.gene08211:CDS |
| GGCGGATGGAGAGTGGATGG+TGG | 0.364010 | 7.3:-23030925 | MS.gene08211:CDS |
| CTCAGGAAGTTTGCGCCGTT+GGG | 0.372372 | 7.3:-23030644 | MS.gene08211:CDS |
| GAGGAAATGAAGAAGAGAAA+TGG | 0.373725 | 7.3:-23031056 | MS.gene08211:CDS |
| AATTCTACTGGAAAATTTCT+CGG | 0.374014 | 7.3:-23031194 | MS.gene08211:CDS |
| CACGCCCTTGTCATTTCGAT+TGG | 0.374644 | 7.3:+23031148 | None:intergenic |
| TTGAGAGTTGGTATGGGATC+TGG | 0.375174 | 7.3:-23030681 | MS.gene08211:CDS |
| TGGTGACCGGAGGATCGGTT+GGG | 0.377809 | 7.3:-23030947 | MS.gene08211:CDS |
| CACTGTCTCCGAATCCTCTA+TGG | 0.382113 | 7.3:-23031417 | MS.gene08211:CDS |
| TGGTGTGAATGCTGTGGTTT+TGG | 0.382670 | 7.3:-23030844 | MS.gene08211:CDS |
| TTCTTAGATCCAGGGTGTTA+AGG | 0.386012 | 7.3:-23029123 | MS.gene08211:CDS |
| GTCATTTCGATTGGACCAAT+TGG | 0.388934 | 7.3:+23031157 | None:intergenic |
| CTGGTAGTCTCGAGGCTCCC+GGG | 0.392525 | 7.3:-23029784 | MS.gene08211:CDS |
| GCTGGTAGTCTCGAGGCTCC+CGG | 0.396502 | 7.3:-23029785 | MS.gene08211:CDS |
| TGCTTTGTCCAGGTTCGTAC+TGG | 0.401327 | 7.3:-23027948 | MS.gene08211:intron |
| TCCCGGGGCTTATGTATATC+AGG | 0.403376 | 7.3:-23029768 | MS.gene08211:intron |
| TTGATTCAAGCTGGTGTTGA+TGG | 0.407424 | 7.3:-23030705 | MS.gene08211:CDS |
| CGATTATATGGAGGCTCCAC+CGG | 0.408688 | 7.3:-23031117 | MS.gene08211:CDS |
| TTGCGCCGTTGGGCGTGGTC+AGG | 0.410150 | 7.3:-23030634 | MS.gene08211:intron |
| TGATGGGTTGAGAGTTGGTA+TGG | 0.414297 | 7.3:-23030688 | MS.gene08211:CDS |
| GGAGGATCGGTTGGGGCGGA+TGG | 0.417599 | 7.3:-23030939 | MS.gene08211:CDS |
| ATCGTAAAAGCTTTATCGTT+GGG | 0.419043 | 7.3:-23029839 | MS.gene08211:CDS |
| TTGGTGACCGGAGGATCGGT+TGG | 0.422009 | 7.3:-23030948 | MS.gene08211:CDS |
| CGGTGGAGCCTCCATATAAT+CGG | 0.423861 | 7.3:+23031118 | None:intergenic |
| GATGGTGGCATCTCAAACTC+TGG | 0.425465 | 7.3:-23029866 | MS.gene08211:CDS |
| AAAATTGCCCAAGGGGTTGT+TGG | 0.425681 | 7.3:-23029256 | MS.gene08211:CDS |
| CACATGACCTTCTTAGATCC+AGG | 0.426297 | 7.3:-23029132 | MS.gene08211:CDS |
| AAATGGAAATGTTGTTGCTT+TGG | 0.427126 | 7.3:-23031039 | MS.gene08211:CDS |
| ACAGAATCTGGTAATTCTAC+TGG | 0.429318 | 7.3:-23031206 | MS.gene08211:CDS |
| CAGGTTGAAGGAGGAATTCA+TGG | 0.430215 | 7.3:-23027918 | MS.gene08211:CDS |
| GGCAGAAGCCATAGAGGATT+CGG | 0.431522 | 7.3:+23031409 | None:intergenic |
| ACTCAGGAAGTTTGCGCCGT+TGG | 0.439724 | 7.3:-23030645 | MS.gene08211:CDS |
| GAAGTTTGCGCCGTTGGGCG+TGG | 0.443788 | 7.3:-23030639 | MS.gene08211:CDS |
| TCCCTTCGTCGCTTCTCCTA+TGG | 0.443897 | 7.3:-23031441 | MS.gene08211:CDS |
| TGCCTTGAGTCATAGCTTCA+AGG | 0.443952 | 7.3:+23029314 | None:intergenic |
| GCGGATGGAGAGTGGATGGT+GGG | 0.445959 | 7.3:-23030924 | MS.gene08211:CDS |
| GCTTCTGCCATGGCCGCACT+TGG | 0.446246 | 7.3:-23031395 | MS.gene08211:CDS |
| AACGGCTCCAACAACCCCTT+GGG | 0.454984 | 7.3:+23029249 | None:intergenic |
| TGTGCCTATCCTCTCTGAAC+CGG | 0.459765 | 7.3:-23031297 | MS.gene08211:CDS |
| GATGATTAAATATGTGAAGA+AGG | 0.460528 | 7.3:-23030787 | MS.gene08211:CDS |
| GGATGGAGAGTGGATGGTGG+GGG | 0.460745 | 7.3:-23030922 | MS.gene08211:CDS |
| CGGATGGAGAGTGGATGGTG+GGG | 0.464751 | 7.3:-23030923 | MS.gene08211:CDS |
| ACAGGGAACTGCTGTTTACA+AGG | 0.465555 | 7.3:-23029930 | MS.gene08211:intron |
| TCTGCCATGGCCGCACTTGG+TGG | 0.465824 | 7.3:-23031392 | MS.gene08211:CDS |
| ATCGTAGGTGTAAGAGAAAC+CGG | 0.465899 | 7.3:+23031553 | None:intergenic |
| GGGAGCATCGACTGTTATGA+TGG | 0.465926 | 7.3:-23029819 | MS.gene08211:CDS |
| GATAGGCACACGGCGGGACT+TGG | 0.467362 | 7.3:+23031310 | None:intergenic |
| ATCCGCCCCAACCGATCCTC+CGG | 0.469251 | 7.3:+23030941 | None:intergenic |
| AGCGACGAAGGGAGTTGAAA+GGG | 0.472950 | 7.3:+23031451 | None:intergenic |
| TAACGGCTCCAACAACCCCT+TGG | 0.477673 | 7.3:+23029248 | None:intergenic |
| GCCGCGTAACCGTCTTCGAT+TGG | 0.478813 | 7.3:+23031593 | None:intergenic |
| CACGTCAGGCTGCTATTGTC+CGG | 0.478909 | 7.3:-23031337 | MS.gene08211:CDS |
| GAGGAGGTTGAGAGGGTGAG+AGG | 0.484489 | 7.3:-23030981 | MS.gene08211:CDS |
| GATCCTCCGGTCACCAACTT+CGG | 0.493217 | 7.3:+23030954 | None:intergenic |
| TGACGTGAAGGAGTGTTGTT+AGG | 0.495408 | 7.3:+23031353 | None:intergenic |
| GGGGATGTTACGACTGAGAC+GGG | 0.496253 | 7.3:+23031472 | None:intergenic |
| GATTATATGGAGGCTCCACC+GGG | 0.497696 | 7.3:-23031116 | MS.gene08211:CDS |
| TCATCCATTGCTTATAAAAG+TGG | 0.502800 | 7.3:-23029905 | MS.gene08211:CDS |
| CACGGCGGGACTTGGCAGTC+CGG | 0.503608 | 7.3:+23031318 | None:intergenic |
| ATCTTGTTCCCTCGTCCCAA+TGG | 0.506438 | 7.3:+23030896 | None:intergenic |
| GGTGTTGATGGGTTGAGAGT+TGG | 0.507985 | 7.3:-23030693 | MS.gene08211:CDS |
| ATCCTCTATGGCTTCTGCCA+TGG | 0.508811 | 7.3:-23031405 | MS.gene08211:CDS |
| GACAAAAGAGGAGGTTGAGA+GGG | 0.509210 | 7.3:-23030988 | MS.gene08211:CDS |
| CCTGAGTTAGATGTTATTGG+TGG | 0.510947 | 7.3:-23030759 | MS.gene08211:CDS |
| TGAAGGAGGAATTCATGGAC+TGG | 0.511160 | 7.3:-23027913 | MS.gene08211:CDS |
| CGGTTGGGGCGGATGGAGAG+TGG | 0.513980 | 7.3:-23030932 | MS.gene08211:CDS |
| TTAGAGCATTTGGTGAAAGC+TGG | 0.518134 | 7.3:-23030864 | MS.gene08211:CDS |
| CATATACCATGCAAGCAGTA+AGG | 0.518987 | 7.3:-23029195 | MS.gene08211:CDS |
| TGGGGCGGATGGAGAGTGGA+TGG | 0.519730 | 7.3:-23030928 | MS.gene08211:CDS |
| TAACAACACTCCTTCACGTC+AGG | 0.521517 | 7.3:-23031351 | MS.gene08211:CDS |
| GCCGAAGGAGAGACGAAAAC+CGG | 0.522856 | 7.3:+23031278 | None:intergenic |
| GATACCACCAAGTGCGGCCA+TGG | 0.523103 | 7.3:+23031388 | None:intergenic |
| TGGGACGAGGGAACAAGATA+AGG | 0.524651 | 7.3:-23030892 | MS.gene08211:CDS |
| ACTGGAGCAGCACAGGTTGA+AGG | 0.526386 | 7.3:-23027930 | MS.gene08211:CDS |
| TGGTTCTATTTGTACTACTC+AGG | 0.528310 | 7.3:-23030661 | MS.gene08211:CDS |
| ATGATGGGAAGCTTCTTAGC+TGG | 0.528805 | 7.3:-23029803 | MS.gene08211:CDS |
| GGTGACCGGAGGATCGGTTG+GGG | 0.529662 | 7.3:-23030946 | MS.gene08211:CDS |
| TATCGTAAAAGCTTTATCGT+TGG | 0.531193 | 7.3:-23029840 | MS.gene08211:CDS |
| ACCTTGCCTTACTGCTTGCA+TGG | 0.532254 | 7.3:+23029189 | None:intergenic |
| GGTTCGTACTGGAGCAGCAC+AGG | 0.533969 | 7.3:-23027937 | MS.gene08211:CDS |
| AAGCGACGAAGGGAGTTGAA+AGG | 0.540703 | 7.3:+23031450 | None:intergenic |
| GGCTATCCGAAGTTGGTGAC+CGG | 0.542521 | 7.3:-23030960 | MS.gene08211:CDS |
| GTCCATAGGAGAAGCGACGA+AGG | 0.542663 | 7.3:+23031439 | None:intergenic |
| TGACAAAAGAGGAGGTTGAG+AGG | 0.547501 | 7.3:-23030989 | MS.gene08211:CDS |
| GCTGAGAATTTGATTCAAGC+TGG | 0.548614 | 7.3:-23030714 | MS.gene08211:CDS |
| GGTGAAGGATGAAGAGGTGG+TGG | 0.551586 | 7.3:-23031018 | MS.gene08211:CDS |
| TTAACACCCTGGATCTAAGA+AGG | 0.559140 | 7.3:+23029125 | None:intergenic |
| GGTGGATTTGGTGACAAAAG+AGG | 0.559564 | 7.3:-23031000 | MS.gene08211:CDS |
| GATTCGGAGACAGTGTCCAT+AGG | 0.561445 | 7.3:+23031425 | None:intergenic |
| TAACCGTCTTCGATTGGCGG+AGG | 0.564397 | 7.3:+23031599 | None:intergenic |
| ACTCCTCCGCCAATCGAAGA+CGG | 0.564726 | 7.3:-23031602 | MS.gene08211:CDS |
| TGCTTTGGTGAAGGATGAAG+AGG | 0.564999 | 7.3:-23031024 | MS.gene08211:CDS |
| TGATTCAAGCTGGTGTTGAT+GGG | 0.565423 | 7.3:-23030704 | MS.gene08211:CDS |
| GACCGGAGGATCGGTTGGGG+CGG | 0.573840 | 7.3:-23030943 | MS.gene08211:CDS |
| GATGGGTTGAGAGTTGGTAT+GGG | 0.574553 | 7.3:-23030687 | MS.gene08211:CDS |
| GGTGAGAGGCTATCCGAAGT+TGG | 0.575095 | 7.3:-23030967 | MS.gene08211:CDS |
| GGAGTTCCTGTCATTGCTGA+TGG | 0.577457 | 7.3:-23029884 | MS.gene08211:CDS |
| GAGTTCCACGGTAGAGAACC+CGG | 0.577584 | 7.3:+23031098 | None:intergenic |
| TGACTCAAGGCAGTGATCAA+AGG | 0.583071 | 7.3:-23029303 | MS.gene08211:CDS |
| ACCTGATATACATAAGCCCC+GGG | 0.583275 | 7.3:+23029767 | None:intergenic |
| TGTTGGAGCCGTTAAAGACA+AGG | 0.584144 | 7.3:-23029239 | MS.gene08211:CDS |
| GAAGTTGGTGACCGGAGGAT+CGG | 0.587925 | 7.3:-23030952 | MS.gene08211:CDS |
| TACCTGATATACATAAGCCC+CGG | 0.587984 | 7.3:+23029766 | None:intergenic |
| GCGTAACCGTCTTCGATTGG+CGG | 0.588487 | 7.3:+23031596 | None:intergenic |
| AGAGAGGATAGGCACACGGC+GGG | 0.589663 | 7.3:+23031304 | None:intergenic |
| TTTCCTCTTCAATCTTCGCA+AGG | 0.590215 | 7.3:+23031072 | None:intergenic |
| TCCCTTGAAGCTATGACTCA+AGG | 0.591282 | 7.3:-23029316 | MS.gene08211:CDS |
| ACAATAGCAGCCTGACGTGA+AGG | 0.596610 | 7.3:+23031341 | None:intergenic |
| ATGCCACCATCAGCAATGAC+AGG | 0.596778 | 7.3:+23029878 | None:intergenic |
| AAATGTTGTTGCTTTGGTGA+AGG | 0.599445 | 7.3:-23031033 | MS.gene08211:CDS |
| GTTCCTGTCATTGCTGATGG+TGG | 0.600022 | 7.3:-23029881 | MS.gene08211:CDS |
| CTGAGTTAGATGTTATTGGT+GGG | 0.602937 | 7.3:-23030758 | MS.gene08211:CDS |
| GCAAAGCTTAAAATTGCCCA+AGG | 0.602956 | 7.3:-23029265 | MS.gene08211:CDS |
| TGACCTTGCGAAGATTGAAG+AGG | 0.605198 | 7.3:-23031075 | MS.gene08211:CDS |
| CAAAGCTTAAAATTGCCCAA+GGG | 0.607807 | 7.3:-23029264 | MS.gene08211:CDS |
| TACCTCTAGCCTTAACACCC+TGG | 0.607961 | 7.3:+23029114 | None:intergenic |
| TGTAGTGAGGGAGGAAGATG+AGG | 0.611469 | 7.3:+23031528 | None:intergenic |
| TCCATAGGAGAAGCGACGAA+GGG | 0.611484 | 7.3:+23031440 | None:intergenic |
| ATCCAGGGTGTTAAGGCTAG+AGG | 0.611715 | 7.3:-23029116 | MS.gene08211:intron |
| CGGCGAAGTCGATGTAGTGA+GGG | 0.612539 | 7.3:+23031516 | None:intergenic |
| GCGGCGAAGTCGATGTAGTG+AGG | 0.613902 | 7.3:+23031515 | None:intergenic |
| ATGTGCAGACTGCAGAGAGT+TGG | 0.614113 | 7.3:+23029150 | None:intergenic |
| TACGACTGAGACGGGAGGAG+AGG | 0.614422 | 7.3:+23031480 | None:intergenic |
| GGCAGTGATCAAAGGTACCT+CGG | 0.616960 | 7.3:-23029295 | MS.gene08211:CDS |
| GGAGCATCGACTGTTATGAT+GGG | 0.618284 | 7.3:-23029818 | MS.gene08211:CDS |
| GCCTTGAGTCATAGCTTCAA+GGG | 0.619235 | 7.3:+23029315 | None:intergenic |
| GCGACGAAGGGAGTTGAAAG+GGG | 0.619315 | 7.3:+23031452 | None:intergenic |
| GTTGGAGCCGTTAAAGACAA+GGG | 0.626283 | 7.3:-23029238 | MS.gene08211:CDS |
| GAGGAAGATGAGGTCATCGT+AGG | 0.626293 | 7.3:+23031538 | None:intergenic |
| TTGGTCCAATCGAAATGACA+AGG | 0.627219 | 7.3:-23031153 | MS.gene08211:CDS |
| AAAGCTTAAAATTGCCCAAG+GGG | 0.628138 | 7.3:-23029263 | MS.gene08211:CDS |
| TGGTAGTCTCGAGGCTCCCG+GGG | 0.630926 | 7.3:-23029783 | MS.gene08211:CDS |
| ACATGACCTTCTTAGATCCA+GGG | 0.631372 | 7.3:-23029131 | MS.gene08211:CDS |
| AACAGCGATACCACCAAGTG+CGG | 0.631904 | 7.3:+23031382 | None:intergenic |
| CTCCACCGGGTTCTCTACCG+TGG | 0.633134 | 7.3:-23031103 | MS.gene08211:CDS |
| CCACCAATAACATCTAACTC+AGG | 0.635588 | 7.3:+23030759 | None:intergenic |
| TTTGGTGAAGGATGAAGAGG+TGG | 0.638094 | 7.3:-23031021 | MS.gene08211:CDS |
| GGCCATGGCAGAAGCCATAG+AGG | 0.638566 | 7.3:+23031403 | None:intergenic |
| CGAAGTCGATGTAGTGAGGG+AGG | 0.643395 | 7.3:+23031519 | None:intergenic |
| GAGAGTTTCCGATTATATGG+AGG | 0.644523 | 7.3:-23031126 | MS.gene08211:CDS |
| CTTCTTAGCTGGTAGTCTCG+AGG | 0.644935 | 7.3:-23029792 | MS.gene08211:CDS |
| CGACGAAGGGAGTTGAAAGG+GGG | 0.648483 | 7.3:+23031453 | None:intergenic |
| CGAGGGAACAAGATAAGGAG+AGG | 0.649099 | 7.3:-23030887 | MS.gene08211:CDS |
| TATCCGAAGTTGGTGACCGG+AGG | 0.650093 | 7.3:-23030957 | MS.gene08211:CDS |
| ACCATGCAAGCAGTAAGGCA+AGG | 0.650696 | 7.3:-23029190 | MS.gene08211:CDS |
| ATATACCTGACCACGCCCAA+CGG | 0.651100 | 7.3:+23030629 | None:intergenic |
| TCAGAATCGATTACTGCCGA+AGG | 0.651499 | 7.3:+23031263 | None:intergenic |
| GCCAATCGAAGACGGTTACG+CGG | 0.652065 | 7.3:-23031594 | MS.gene08211:CDS |
| GAAAGCTGGTGTGAATGCTG+TGG | 0.657777 | 7.3:-23030850 | MS.gene08211:CDS |
| GGAGCAGCACAGGTTGAAGG+AGG | 0.660899 | 7.3:-23027927 | MS.gene08211:CDS |
| TTCGCAAGGTCAGAGTTCCA+CGG | 0.665644 | 7.3:+23031086 | None:intergenic |
| AAAACCGGTTCAGAGAGGAT+AGG | 0.681418 | 7.3:+23031293 | None:intergenic |
| GGAGAGGTCGACTTCATCAG+CGG | 0.694285 | 7.3:+23031496 | None:intergenic |
| TGGTCCAATCGAAATGACAA+GGG | 0.694909 | 7.3:-23031152 | MS.gene08211:CDS |
| AGACGAAAACCGGTTCAGAG+AGG | 0.695318 | 7.3:+23031288 | None:intergenic |
| GGATTTGGTGACAAAAGAGG+AGG | 0.695676 | 7.3:-23030997 | MS.gene08211:CDS |
| GATGTTACGACTGAGACGGG+AGG | 0.697292 | 7.3:+23031475 | None:intergenic |
| GTTCAGAGAGGATAGGCACA+CGG | 0.728183 | 7.3:+23031300 | None:intergenic |
| AATCGAAGACGGTTACGCGG+CGG | 0.728337 | 7.3:-23031591 | MS.gene08211:CDS |
| TAAGCTTTGCTGTATCACCG+AGG | 0.732907 | 7.3:+23029278 | None:intergenic |
| CAGAGAGGATAGGCACACGG+CGG | 0.750161 | 7.3:+23031303 | None:intergenic |
| TTCCACGGTAGAGAACCCGG+TGG | 0.809206 | 7.3:+23031101 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTCTAATTAGT+TGG | - | chr7.3:23031072-23031091 | MS.gene08211:CDS | 10.0% |
| !! | AAAAAAAATTCTAATTAGTT+GGG | - | chr7.3:23031073-23031092 | MS.gene08211:CDS | 10.0% |
| !!! | AAGAAAGTATTAAAAATAAA+AGG | - | chr7.3:23029399-23029418 | MS.gene08211:intron | 10.0% |
| !!! | AGAAAGTATTAAAAATAAAA+GGG | - | chr7.3:23029400-23029419 | MS.gene08211:intron | 10.0% |
| !! | AAACAAAAGATAATCATTTG+AGG | + | chr7.3:23031300-23031319 | None:intergenic | 20.0% |
| !! | AAAGATCATTAACATCAAAT+TGG | - | chr7.3:23031273-23031292 | MS.gene08211:CDS | 20.0% |
| !! | AATTGAGTAACAATACATTA+TGG | + | chr7.3:23031522-23031541 | None:intergenic | 20.0% |
| !! | AATTGAGTAACATTACATTA+TGG | + | chr7.3:23031450-23031469 | None:intergenic | 20.0% |
| !! | ATTTCTCCAATAAATAAAAG+TGG | - | chr7.3:23030875-23030894 | MS.gene08211:CDS | 20.0% |
| !! | CTACAAAAAATTATTGATAG+TGG | + | chr7.3:23031348-23031367 | None:intergenic | 20.0% |
| !! | GATTCTGTTACTAAAATAAA+AGG | + | chr7.3:23028280-23028299 | None:intergenic | 20.0% |
| !! | GTAAAAAAGACAAATATTGT+GGG | - | chr7.3:23030813-23030832 | MS.gene08211:CDS | 20.0% |
| !! | TAAAAAAGACAAATATTGTG+GGG | - | chr7.3:23030814-23030833 | MS.gene08211:CDS | 20.0% |
| !! | TAAACAAGAAAACATGAAAA+AGG | - | chr7.3:23030676-23030695 | MS.gene08211:CDS | 20.0% |
| !! | TGTAAAAAAGACAAATATTG+TGG | - | chr7.3:23030812-23030831 | MS.gene08211:CDS | 20.0% |
| !!! | ACAGTTCACTATTTTTAAAA+AGG | + | chr7.3:23029849-23029868 | None:intergenic | 20.0% |
| !!! | GTCTTTTTTACAAAATAGAT+AGG | + | chr7.3:23030804-23030823 | None:intergenic | 20.0% |
| !!! | TCATAATCTTTTGAAGATAA+TGG | - | chr7.3:23031401-23031420 | MS.gene08211:CDS | 20.0% |
| !!! | TGTCTTTTACAAAATATAAG+AGG | + | chr7.3:23030754-23030773 | None:intergenic | 20.0% |
| !!! | TTCTTGTTTAAAGAATGAAA+TGG | + | chr7.3:23030666-23030685 | None:intergenic | 20.0% |
| !!! | TTTATTTTAGTAACAGAATC+TGG | - | chr7.3:23028280-23028299 | MS.gene08211:intron | 20.0% |
| !!! | TTTGAATGTGAAAAGTATTT+CGG | - | chr7.3:23029915-23029934 | MS.gene08211:CDS | 20.0% |
| !!! | TTTTAATACTTTCTTGAGAA+TGG | + | chr7.3:23029394-23029413 | None:intergenic | 20.0% |
| !!! | TTTTTTACAAAATAGATAGG+AGG | + | chr7.3:23030801-23030820 | None:intergenic | 20.0% |
| ! | AAAGAATGAAATGGATGAAA+TGG | + | chr7.3:23030657-23030676 | None:intergenic | 25.0% |
| ! | AAAGTTAGGATAACAGTAAT+AGG | - | chr7.3:23030587-23030606 | MS.gene08211:intron | 25.0% |
| ! | AAATGAAACAGCTACAATAA+CGG | + | chr7.3:23030456-23030475 | None:intergenic | 25.0% |
| ! | AATTCTACTGGAAAATTTCT+CGG | - | chr7.3:23028304-23028323 | MS.gene08211:intron | 25.0% |
| ! | AGAAAATCATCACTATCTAA+AGG | + | chr7.3:23029437-23029456 | None:intergenic | 25.0% |
| ! | AGGGAATTCTATTTATCAAT+TGG | - | chr7.3:23028687-23028706 | MS.gene08211:intron | 25.0% |
| ! | CATGAGTTAAATAGAAGATT+AGG | + | chr7.3:23030518-23030537 | None:intergenic | 25.0% |
| ! | CTTGAATTGAAAATCAAAAG+AGG | - | chr7.3:23031108-23031127 | MS.gene08211:CDS | 25.0% |
| ! | GATGATTAAATATGTGAAGA+AGG | - | chr7.3:23028711-23028730 | MS.gene08211:intron | 25.0% |
| ! | GTAAGTTGTTTAACCAAATA+TGG | + | chr7.3:23029004-23029023 | None:intergenic | 25.0% |
| ! | TACATTTCTTACTCTTTCTT+TGG | - | chr7.3:23030036-23030055 | MS.gene08211:intron | 25.0% |
| ! | TATATACGAAACTAAATGAC+AGG | + | chr7.3:23030076-23030095 | None:intergenic | 25.0% |
| ! | TTTCATTTACGCAATCAAAA+TGG | - | chr7.3:23030468-23030487 | MS.gene08211:intron | 25.0% |
| !! | ATGTCATTTAAGAACCAATT+TGG | - | chr7.3:23031374-23031393 | MS.gene08211:CDS | 25.0% |
| !!! | GCTTATTTTATCTTATCTAC+TGG | + | chr7.3:23029176-23029195 | None:intergenic | 25.0% |
| !!! | GTTTTTATTTGGTGTGTATA+TGG | - | chr7.3:23029987-23030006 | MS.gene08211:intron | 25.0% |
| !!! | TCTATTGATTTAATCCTTTC+CGG | + | chr7.3:23031037-23031056 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTGCTCCAGAA+TGG | - | chr7.3:23030128-23030147 | MS.gene08211:intron | 25.0% |
| AAACATATGCATGCATAACT+GGG | + | chr7.3:23029076-23029095 | None:intergenic | 30.0% | |
| AAACTAAATGACAGGAAACA+AGG | + | chr7.3:23030068-23030087 | None:intergenic | 30.0% | |
| AAGATTATGAGAGACCAAAT+TGG | + | chr7.3:23031391-23031410 | None:intergenic | 30.0% | |
| AAGCTTCAAATCTTACGAAA+AGG | + | chr7.3:23029792-23029811 | None:intergenic | 30.0% | |
| AGACTCGATATTAAGAATCA+GGG | + | chr7.3:23029541-23029560 | None:intergenic | 30.0% | |
| AGATTTCTAATTCTTTCCAC+CGG | - | chr7.3:23031015-23031034 | MS.gene08211:CDS | 30.0% | |
| CTTTCACTAAACTATTACTG+TGG | - | chr7.3:23029228-23029247 | MS.gene08211:CDS | 30.0% | |
| GTATTCACACAAAACACTTA+TGG | + | chr7.3:23031209-23031228 | None:intergenic | 30.0% | |
| TATCCTGAGTTAGATGTTAT+TGG | - | chr7.3:23028736-23028755 | MS.gene08211:intron | 30.0% | |
| TCATCCATTGCTTATAAAAG+TGG | - | chr7.3:23029593-23029612 | MS.gene08211:intron | 30.0% | |
| TGAGTAACAATACATTATGG+TGG | + | chr7.3:23031519-23031538 | None:intergenic | 30.0% | |
| TGAGTAACATTACATTATGG+TGG | + | chr7.3:23031447-23031466 | None:intergenic | 30.0% | |
| TGATGAAAACTTGTGAATTG+TGG | - | chr7.3:23029763-23029782 | MS.gene08211:intron | 30.0% | |
| TTCATATAAACTCCTCAGAT+TGG | - | chr7.3:23031244-23031263 | MS.gene08211:CDS | 30.0% | |
| ! | AAATGGAAATGTTGTTGCTT+TGG | - | chr7.3:23028459-23028478 | MS.gene08211:intron | 30.0% |
| ! | AATTCACAAGTTTTCATCAG+GGG | + | chr7.3:23029762-23029781 | None:intergenic | 30.0% |
| ! | ACAATTCACAAGTTTTCATC+AGG | + | chr7.3:23029764-23029783 | None:intergenic | 30.0% |
| ! | AGTATTCTTATTTCTTGCTC+TGG | - | chr7.3:23030417-23030436 | MS.gene08211:intron | 30.0% |
| ! | ATCGTAAAAGCTTTATCGTT+GGG | - | chr7.3:23029659-23029678 | MS.gene08211:intron | 30.0% |
| ! | CAATTCACAAGTTTTCATCA+GGG | + | chr7.3:23029763-23029782 | None:intergenic | 30.0% |
| ! | GTCAAAAAGTATAGAGGAAT+GGG | - | chr7.3:23030158-23030177 | MS.gene08211:intron | 30.0% |
| ! | TATCGTAAAAGCTTTATCGT+TGG | - | chr7.3:23029658-23029677 | MS.gene08211:intron | 30.0% |
| ! | TGTCAAAAAGTATAGAGGAA+TGG | - | chr7.3:23030157-23030176 | MS.gene08211:intron | 30.0% |
| ! | TGTCATTTGAACATGCTTTA+GGG | - | chr7.3:23030841-23030860 | MS.gene08211:CDS | 30.0% |
| !! | AACTCCACTTTTATAAGCAA+TGG | + | chr7.3:23029600-23029619 | None:intergenic | 30.0% |
| !! | CACTCACCACTTTTATTTAT+TGG | + | chr7.3:23030884-23030903 | None:intergenic | 30.0% |
| !! | TTATCTGCTTTTGAAGACAA+TGG | - | chr7.3:23031473-23031492 | MS.gene08211:CDS | 30.0% |
| !! | TTTTTCGAACAATAGCAGTT+TGG | - | chr7.3:23031320-23031339 | MS.gene08211:CDS | 30.0% |
| !!! | ACTGACGTGTTGTTTTTATT+TGG | - | chr7.3:23029976-23029995 | MS.gene08211:intron | 30.0% |
| AAAGCTCAAAACAACACGTA+CGG | + | chr7.3:23029212-23029231 | None:intergenic | 35.0% | |
| AAAGCTTAAAATTGCCCAAG+GGG | - | chr7.3:23030235-23030254 | MS.gene08211:intron | 35.0% | |
| ACAGAATCTGGTAATTCTAC+TGG | - | chr7.3:23028292-23028311 | MS.gene08211:intron | 35.0% | |
| ACCAAATATGGTCACAATCA+AGG | + | chr7.3:23028992-23029011 | None:intergenic | 35.0% | |
| ATGAAAAATAGCACTACCCT+CGG | + | chr7.3:23030957-23030976 | None:intergenic | 35.0% | |
| ATGGCTTCTAGCAAATTACA+CGG | + | chr7.3:23031190-23031209 | None:intergenic | 35.0% | |
| CAAACATATGCATGCATAAC+TGG | + | chr7.3:23029077-23029096 | None:intergenic | 35.0% | |
| CAAAGCTTAAAATTGCCCAA+GGG | - | chr7.3:23030234-23030253 | MS.gene08211:intron | 35.0% | |
| CACTGTAATGTAATTGTCGA+TGG | - | chr7.3:23031137-23031156 | MS.gene08211:CDS | 35.0% | |
| CAGACTCGATATTAAGAATC+AGG | + | chr7.3:23029542-23029561 | None:intergenic | 35.0% | |
| CAGTTATGCATGCATATGTT+TGG | - | chr7.3:23029075-23029094 | MS.gene08211:intron | 35.0% | |
| CTGAGTTAGATGTTATTGGT+GGG | - | chr7.3:23028740-23028759 | MS.gene08211:intron | 35.0% | |
| GAGGAAATGAAGAAGAGAAA+TGG | - | chr7.3:23028442-23028461 | MS.gene08211:intron | 35.0% | |
| GATTCTTAATATCGAGTCTG+TGG | - | chr7.3:23029542-23029561 | MS.gene08211:intron | 35.0% | |
| GTAACAATACATTATGGTGG+AGG | + | chr7.3:23031516-23031535 | None:intergenic | 35.0% | |
| GTATGTCTCACTATTCTCAT+GGG | + | chr7.3:23030730-23030749 | None:intergenic | 35.0% | |
| TGTATGTCTCACTATTCTCA+TGG | + | chr7.3:23030731-23030750 | None:intergenic | 35.0% | |
| TTGTAGCAACAAAGGATCAT+TGG | + | chr7.3:23029309-23029328 | None:intergenic | 35.0% | |
| ! | ATCTACTGGCATCAACTTTT+GGG | + | chr7.3:23029162-23029181 | None:intergenic | 35.0% |
| ! | ATCTTTTGCATACCAATCTG+AGG | + | chr7.3:23031259-23031278 | None:intergenic | 35.0% |
| ! | ATGCACATAGCATTTTTCAC+TGG | - | chr7.3:23030535-23030554 | MS.gene08211:intron | 35.0% |
| ! | ATTGATTTAATCCTTTCCGG+TGG | + | chr7.3:23031034-23031053 | None:intergenic | 35.0% |
| ! | CAACGTGTCAAAAAGTATAG+AGG | - | chr7.3:23030152-23030171 | MS.gene08211:intron | 35.0% |
| ! | CTGTTATCCTAACTTTTCCA+CGG | + | chr7.3:23030583-23030602 | None:intergenic | 35.0% |
| ! | TATCTACTGGCATCAACTTT+TGG | + | chr7.3:23029163-23029182 | None:intergenic | 35.0% |
| ! | TGGTTCTATTTGTACTACTC+AGG | - | chr7.3:23028837-23028856 | MS.gene08211:intron | 35.0% |
| ! | TGTCATTTAAGCATAACCGA+GGG | - | chr7.3:23030938-23030957 | MS.gene08211:CDS | 35.0% |
| ! | TGTTATCCTAACTTTTCCAC+GGG | + | chr7.3:23030582-23030601 | None:intergenic | 35.0% |
| ! | TTGTCATTTAAGCATAACCG+AGG | - | chr7.3:23030937-23030956 | MS.gene08211:CDS | 35.0% |
| !! | AAATGTTGTTGCTTTGGTGA+AGG | - | chr7.3:23028465-23028484 | MS.gene08211:intron | 35.0% |
| !! | AGGCAAGGTTTTCAAGATAT+TGG | - | chr7.3:23030323-23030342 | MS.gene08211:intron | 35.0% |
| !! | CAACTTTTGGGAGCTTATTT+GGG | + | chr7.3:23029150-23029169 | None:intergenic | 35.0% |
| !! | CTCTATACTTTTTGACACGT+TGG | + | chr7.3:23030154-23030173 | None:intergenic | 35.0% |
| !! | GTGTCATTTGAACATGCTTT+AGG | - | chr7.3:23030840-23030859 | MS.gene08211:CDS | 35.0% |
| !! | TCAACTTTTGGGAGCTTATT+TGG | + | chr7.3:23029151-23029170 | None:intergenic | 35.0% |
| !! | TTTGAACAGTTTGTTGCATC+TGG | - | chr7.3:23028924-23028943 | MS.gene08211:intron | 35.0% |
| !!! | GTTTTGTTTCGAAGACCAAT+TGG | - | chr7.3:23028326-23028345 | MS.gene08211:intron | 35.0% |
| !!! | TGGTTTTGGATAGTTCACAA+GGG | - | chr7.3:23028668-23028687 | MS.gene08211:intron | 35.0% |
| ACATGACCTTCTTAGATCCA+GGG | - | chr7.3:23030367-23030386 | MS.gene08211:intron | 40.0% | |
| ACGGCTTATTGTAGCAACAA+AGG | + | chr7.3:23029317-23029336 | None:intergenic | 40.0% | |
| ATCGTAGGTGTAAGAGAAAC+CGG | + | chr7.3:23027948-23027967 | None:intergenic | 40.0% | |
| ATGTAATTGTCGATGGTCCA+AGG | - | chr7.3:23031144-23031163 | MS.gene08211:CDS | 40.0% | |
| ATTGTGTATCTTGATGCGTG+TGG | - | chr7.3:23029877-23029896 | MS.gene08211:CDS | 40.0% | |
| CACAGAACCCTTGTCTTTAA+CGG | + | chr7.3:23030270-23030289 | None:intergenic | 40.0% | |
| CATATACCATGCAAGCAGTA+AGG | - | chr7.3:23030303-23030322 | MS.gene08211:intron | 40.0% | |
| CCACCAATAACATCTAACTC+AGG | + | chr7.3:23028742-23028761 | None:intergenic | 40.0% | |
| CCTGAGTTAGATGTTATTGG+TGG | - | chr7.3:23028739-23028758 | MS.gene08211:intron | 40.0% | |
| CGAATTCCAGATATTGCTCA+AGG | - | chr7.3:23029515-23029534 | MS.gene08211:intron | 40.0% | |
| CGTGAGAGTTTCCGATTATA+TGG | - | chr7.3:23028369-23028388 | MS.gene08211:intron | 40.0% | |
| CTTACTGCTTGCATGGTATA+TGG | + | chr7.3:23030305-23030324 | None:intergenic | 40.0% | |
| GAGAGTTTCCGATTATATGG+AGG | - | chr7.3:23028372-23028391 | MS.gene08211:intron | 40.0% | |
| GCAAAGCTTAAAATTGCCCA+AGG | - | chr7.3:23030233-23030252 | MS.gene08211:intron | 40.0% | |
| GCCTTGATTGTGACCATATT+TGG | - | chr7.3:23028988-23029007 | MS.gene08211:intron | 40.0% | |
| GCTGAGAATTTGATTCAAGC+TGG | - | chr7.3:23028784-23028803 | MS.gene08211:intron | 40.0% | |
| GTCATTTCGATTGGACCAAT+TGG | + | chr7.3:23028344-23028363 | None:intergenic | 40.0% | |
| TACCTGATATACATAAGCCC+CGG | + | chr7.3:23029735-23029754 | None:intergenic | 40.0% | |
| TCTAATTCTTTCCACCGGAA+AGG | - | chr7.3:23031020-23031039 | MS.gene08211:CDS | 40.0% | |
| TGGTCCAATCGAAATGACAA+GGG | - | chr7.3:23028346-23028365 | MS.gene08211:intron | 40.0% | |
| TGTAATTGTCGATGGTCCAA+GGG | - | chr7.3:23031145-23031164 | MS.gene08211:CDS | 40.0% | |
| TTAACACCCTGGATCTAAGA+AGG | + | chr7.3:23030376-23030395 | None:intergenic | 40.0% | |
| TTACGTTATCTGCTTTGTCC+AGG | - | chr7.3:23031540-23031559 | MS.gene08211:CDS | 40.0% | |
| TTGGTCCAATCGAAATGACA+AGG | - | chr7.3:23028345-23028364 | MS.gene08211:intron | 40.0% | |
| TTGTTGCTACAATAAGCCGT+GGG | - | chr7.3:23029317-23029336 | MS.gene08211:CDS | 40.0% | |
| TTTCCTCTTCAATCTTCGCA+AGG | + | chr7.3:23028429-23028448 | None:intergenic | 40.0% | |
| TTTGTTGCTACAATAAGCCG+TGG | - | chr7.3:23029316-23029335 | MS.gene08211:CDS | 40.0% | |
| ! | AACAACACGTACGGTTTGTT+TGG | + | chr7.3:23029203-23029222 | None:intergenic | 40.0% |
| ! | AGGTGAGTGTAATTGATGAC+AGG | + | chr7.3:23030781-23030800 | None:intergenic | 40.0% |
| ! | TAAGGAGAGGTTAGAGCATT+TGG | - | chr7.3:23028624-23028643 | MS.gene08211:intron | 40.0% |
| ! | TTAGAGCATTTGGTGAAAGC+TGG | - | chr7.3:23028634-23028653 | MS.gene08211:intron | 40.0% |
| ! | TTCTTAGATCCAGGGTGTTA+AGG | - | chr7.3:23030375-23030394 | MS.gene08211:intron | 40.0% |
| ! | TTGATTCAAGCTGGTGTTGA+TGG | - | chr7.3:23028793-23028812 | MS.gene08211:intron | 40.0% |
| ! | TTTTCCACGGGCAATACTTA+TGG | + | chr7.3:23030570-23030589 | None:intergenic | 40.0% |
| !! | CATTTGAACATGCTTTAGGG+AGG | - | chr7.3:23030844-23030863 | MS.gene08211:CDS | 40.0% |
| !! | TGATTCAAGCTGGTGTTGAT+GGG | - | chr7.3:23028794-23028813 | MS.gene08211:intron | 40.0% |
| !! | TGGCTTTGGATTGTTGTTGT+AGG | - | chr7.3:23028944-23028963 | MS.gene08211:intron | 40.0% |
| !!! | GTGGTTTTGGATAGTTCACA+AGG | - | chr7.3:23028667-23028686 | MS.gene08211:intron | 40.0% |
| AAAATTGCCCAAGGGGTTGT+TGG | - | chr7.3:23030242-23030261 | MS.gene08211:intron | 45.0% | |
| ACCTGATATACATAAGCCCC+GGG | + | chr7.3:23029734-23029753 | None:intergenic | 45.0% | |
| ATATCGAGTCTGTGGTTGAC+AGG | - | chr7.3:23029550-23029569 | MS.gene08211:intron | 45.0% | |
| CACATGACCTTCTTAGATCC+AGG | - | chr7.3:23030366-23030385 | MS.gene08211:intron | 45.0% | |
| GACAAAAGAGGAGGTTGAGA+GGG | - | chr7.3:23028510-23028529 | MS.gene08211:intron | 45.0% | |
| GCCTTGAGTCATAGCTTCAA+GGG | + | chr7.3:23030186-23030205 | None:intergenic | 45.0% | |
| GTAATTGTCGATGGTCCAAG+GGG | - | chr7.3:23031146-23031165 | MS.gene08211:CDS | 45.0% | |
| GTATTGCCCGTGGAAAAGTT+AGG | - | chr7.3:23030573-23030592 | MS.gene08211:intron | 45.0% | |
| GTTGGAGCCGTTAAAGACAA+GGG | - | chr7.3:23030260-23030279 | MS.gene08211:intron | 45.0% | |
| TAACAACACTCCTTCACGTC+AGG | - | chr7.3:23028147-23028166 | MS.gene08211:intron | 45.0% | |
| TATCGAGTCTGTGGTTGACA+GGG | - | chr7.3:23029551-23029570 | MS.gene08211:intron | 45.0% | |
| TCAGAATCGATTACTGCCGA+AGG | + | chr7.3:23028238-23028257 | None:intergenic | 45.0% | |
| TCCCTTGAAGCTATGACTCA+AGG | - | chr7.3:23030182-23030201 | MS.gene08211:intron | 45.0% | |
| TGAAGGAGGAATTCATGGAC+TGG | - | chr7.3:23031585-23031604 | MS.gene08211:CDS | 45.0% | |
| TGACAAAAGAGGAGGTTGAG+AGG | - | chr7.3:23028509-23028528 | MS.gene08211:intron | 45.0% | |
| TGACCTTGCGAAGATTGAAG+AGG | - | chr7.3:23028423-23028442 | MS.gene08211:intron | 45.0% | |
| TGACTCAAGGCAGTGATCAA+AGG | - | chr7.3:23030195-23030214 | MS.gene08211:intron | 45.0% | |
| TGCCTTGAGTCATAGCTTCA+AGG | + | chr7.3:23030187-23030206 | None:intergenic | 45.0% | |
| TGCTTTGGTGAAGGATGAAG+AGG | - | chr7.3:23028474-23028493 | MS.gene08211:intron | 45.0% | |
| TGTATCTTGATGCGTGTGGT+TGG | - | chr7.3:23029881-23029900 | MS.gene08211:CDS | 45.0% | |
| TGTCTCACTATTCTCATGGG+AGG | + | chr7.3:23030727-23030746 | None:intergenic | 45.0% | |
| TGTTGCTACAATAAGCCGTG+GGG | - | chr7.3:23029318-23029337 | MS.gene08211:CDS | 45.0% | |
| TGTTGGAGCCGTTAAAGACA+AGG | - | chr7.3:23030259-23030278 | MS.gene08211:intron | 45.0% | |
| TTTGGTGAAGGATGAAGAGG+TGG | - | chr7.3:23028477-23028496 | MS.gene08211:intron | 45.0% | |
| ! | AAAACCGGTTCAGAGAGGAT+AGG | + | chr7.3:23028208-23028227 | None:intergenic | 45.0% |
| ! | ACAGGGAACTGCTGTTTACA+AGG | - | chr7.3:23029568-23029587 | MS.gene08211:intron | 45.0% |
| ! | ATGATGGGAAGCTTCTTAGC+TGG | - | chr7.3:23029695-23029714 | MS.gene08211:intron | 45.0% |
| ! | CACAAGTTTTCATCAGGGGT+TGG | + | chr7.3:23029758-23029777 | None:intergenic | 45.0% |
| ! | CAGGTTGAAGGAGGAATTCA+TGG | - | chr7.3:23031580-23031599 | MS.gene08211:CDS | 45.0% |
| ! | GTATCCATAAGTATTGCCCG+TGG | - | chr7.3:23030563-23030582 | MS.gene08211:intron | 45.0% |
| ! | TAAGCTTTGCTGTATCACCG+AGG | + | chr7.3:23030223-23030242 | None:intergenic | 45.0% |
| ! | TGGTGTGAATGCTGTGGTTT+TGG | - | chr7.3:23028654-23028673 | MS.gene08211:intron | 45.0% |
| ! | TTTGAAGCTTGTGCTGTGTG+TGG | - | chr7.3:23029802-23029821 | MS.gene08211:CDS | 45.0% |
| ! | TTTTGACACGTTGGCCATTC+TGG | + | chr7.3:23030145-23030164 | None:intergenic | 45.0% |
| !! | CAGTTTGTTGCATCTGGCTT+TGG | - | chr7.3:23028930-23028949 | MS.gene08211:intron | 45.0% |
| !! | GATGGGTTGAGAGTTGGTAT+GGG | - | chr7.3:23028811-23028830 | MS.gene08211:intron | 45.0% |
| !! | GGAGCATCGACTGTTATGAT+GGG | - | chr7.3:23029680-23029699 | MS.gene08211:intron | 45.0% |
| !! | GGATTTGGTGACAAAAGAGG+AGG | - | chr7.3:23028501-23028520 | MS.gene08211:intron | 45.0% |
| !! | GGTGGATTTGGTGACAAAAG+AGG | - | chr7.3:23028498-23028517 | MS.gene08211:intron | 45.0% |
| !! | TGACGTGAAGGAGTGTTGTT+AGG | + | chr7.3:23028148-23028167 | None:intergenic | 45.0% |
| !! | TGATGGGTTGAGAGTTGGTA+TGG | - | chr7.3:23028810-23028829 | MS.gene08211:intron | 45.0% |
| !! | TTGAGAGTTGGTATGGGATC+TGG | - | chr7.3:23028817-23028836 | MS.gene08211:intron | 45.0% |
| AACAGCGATACCACCAAGTG+CGG | + | chr7.3:23028119-23028138 | None:intergenic | 50.0% | |
| AAGCGACGAAGGGAGTTGAA+AGG | + | chr7.3:23028051-23028070 | None:intergenic | 50.0% | |
| ACAATAGCAGCCTGACGTGA+AGG | + | chr7.3:23028160-23028179 | None:intergenic | 50.0% | |
| ACCATGCAAGCAGTAAGGCA+AGG | - | chr7.3:23030308-23030327 | MS.gene08211:intron | 50.0% | |
| ACCTTGCCTTACTGCTTGCA+TGG | + | chr7.3:23030312-23030331 | None:intergenic | 50.0% | |
| AGAAGAGATTGCTCCACTCC+AGG | + | chr7.3:23029363-23029382 | None:intergenic | 50.0% | |
| AGCGACGAAGGGAGTTGAAA+GGG | + | chr7.3:23028050-23028069 | None:intergenic | 50.0% | |
| ATATACCTGACCACGCCCAA+CGG | + | chr7.3:23028872-23028891 | None:intergenic | 50.0% | |
| ATCCTCTATGGCTTCTGCCA+TGG | - | chr7.3:23028093-23028112 | MS.gene08211:intron | 50.0% | |
| ATCTTGTTCCCTCGTCCCAA+TGG | + | chr7.3:23028605-23028624 | None:intergenic | 50.0% | |
| ATGCCACCATCAGCAATGAC+AGG | + | chr7.3:23029623-23029642 | None:intergenic | 50.0% | |
| ATGTGCAGACTGCAGAGAGT+TGG | + | chr7.3:23030351-23030370 | None:intergenic | 50.0% | |
| CACTGTCTCCGAATCCTCTA+TGG | - | chr7.3:23028081-23028100 | MS.gene08211:intron | 50.0% | |
| CGAGGGAACAAGATAAGGAG+AGG | - | chr7.3:23028611-23028630 | MS.gene08211:intron | 50.0% | |
| CGATTATATGGAGGCTCCAC+CGG | - | chr7.3:23028381-23028400 | MS.gene08211:intron | 50.0% | |
| CGGTGGAGCCTCCATATAAT+CGG | + | chr7.3:23028383-23028402 | None:intergenic | 50.0% | |
| CTTCTTAGCTGGTAGTCTCG+AGG | - | chr7.3:23029706-23029725 | MS.gene08211:intron | 50.0% | |
| GAAAGCTGGTGTGAATGCTG+TGG | - | chr7.3:23028648-23028667 | MS.gene08211:intron | 50.0% | |
| GAGGAAGATGAGGTCATCGT+AGG | + | chr7.3:23027963-23027982 | None:intergenic | 50.0% | |
| GATGAAGACGAGAATCCCCT+TGG | + | chr7.3:23031164-23031183 | None:intergenic | 50.0% | |
| GATTATATGGAGGCTCCACC+GGG | - | chr7.3:23028382-23028401 | MS.gene08211:intron | 50.0% | |
| GATTCGGAGACAGTGTCCAT+AGG | + | chr7.3:23028076-23028095 | None:intergenic | 50.0% | |
| GGAGTTCCTGTCATTGCTGA+TGG | - | chr7.3:23029614-23029633 | MS.gene08211:intron | 50.0% | |
| GGCAGAAGCCATAGAGGATT+CGG | + | chr7.3:23028092-23028111 | None:intergenic | 50.0% | |
| GGGTGTTAAGGCTAGAGGTA+TGG | - | chr7.3:23030387-23030406 | MS.gene08211:intron | 50.0% | |
| GTTCAGAGAGGATAGGCACA+CGG | + | chr7.3:23028201-23028220 | None:intergenic | 50.0% | |
| GTTCCTGTCATTGCTGATGG+TGG | - | chr7.3:23029617-23029636 | MS.gene08211:intron | 50.0% | |
| TCAGGGCCTTGAGCAATATC+TGG | + | chr7.3:23029524-23029543 | None:intergenic | 50.0% | |
| TCCATAGGAGAAGCGACGAA+GGG | + | chr7.3:23028061-23028080 | None:intergenic | 50.0% | |
| TCCCGGGGCTTATGTATATC+AGG | - | chr7.3:23029730-23029749 | MS.gene08211:intron | 50.0% | |
| TGCTTTGTCCAGGTTCGTAC+TGG | - | chr7.3:23031550-23031569 | MS.gene08211:CDS | 50.0% | |
| TGGGACGAGGGAACAAGATA+AGG | - | chr7.3:23028606-23028625 | MS.gene08211:intron | 50.0% | |
| TGTAGTGAGGGAGGAAGATG+AGG | + | chr7.3:23027973-23027992 | None:intergenic | 50.0% | |
| TGTGCCTATCCTCTCTGAAC+CGG | - | chr7.3:23028201-23028220 | MS.gene08211:intron | 50.0% | |
| TTCGCAAGGTCAGAGTTCCA+CGG | + | chr7.3:23028415-23028434 | None:intergenic | 50.0% | |
| ! | AGACGAAAACCGGTTCAGAG+AGG | + | chr7.3:23028213-23028232 | None:intergenic | 50.0% |
| ! | ATCCAGGGTGTTAAGGCTAG+AGG | - | chr7.3:23030382-23030401 | MS.gene08211:intron | 50.0% |
| ! | CACGCCCTTGTCATTTCGAT+TGG | + | chr7.3:23028353-23028372 | None:intergenic | 50.0% |
| ! | CACGTACGGTTTGTTTGGAC+TGG | + | chr7.3:23029198-23029217 | None:intergenic | 50.0% |
| ! | GATGGTGGCATCTCAAACTC+TGG | - | chr7.3:23029632-23029651 | MS.gene08211:intron | 50.0% |
| ! | GCGGAGAAGCTTTTCAACAC+CGG | - | chr7.3:23027926-23027945 | MS.gene08211:CDS | 50.0% |
| !! | ACCGGTTTTCGTCTCTCCTT+CGG | - | chr7.3:23028219-23028238 | MS.gene08211:intron | 50.0% |
| !! | GGATGAAGAGGTGGTGGATT+TGG | - | chr7.3:23028486-23028505 | MS.gene08211:intron | 50.0% |
| !! | GGCAGTGATCAAAGGTACCT+CGG | - | chr7.3:23030203-23030222 | MS.gene08211:intron | 50.0% |
| !! | GGGAGCATCGACTGTTATGA+TGG | - | chr7.3:23029679-23029698 | MS.gene08211:intron | 50.0% |
| !! | GGTGTTGATGGGTTGAGAGT+TGG | - | chr7.3:23028805-23028824 | MS.gene08211:intron | 50.0% |
| !! | TACCTCTAGCCTTAACACCC+TGG | + | chr7.3:23030387-23030406 | None:intergenic | 50.0% |
| AACGGCTCCAACAACCCCTT+GGG | + | chr7.3:23030252-23030271 | None:intergenic | 55.0% | |
| AATAAGCCGTGGGGCTTGTG+TGG | - | chr7.3:23029327-23029346 | MS.gene08211:CDS | 55.0% | |
| AATCGAAGACGGTTACGCGG+CGG | - | chr7.3:23027907-23027926 | MS.gene08211:CDS | 55.0% | |
| ACTCAGGAAGTTTGCGCCGT+TGG | - | chr7.3:23028853-23028872 | MS.gene08211:intron | 55.0% | |
| ACTCCTCCGCCAATCGAAGA+CGG | - | chr7.3:23027896-23027915 | MS.gene08211:CDS | 55.0% | |
| AGATTGCTCCACTCCAGGTC+AGG | + | chr7.3:23029358-23029377 | None:intergenic | 55.0% | |
| CACGTCAGGCTGCTATTGTC+CGG | - | chr7.3:23028161-23028180 | MS.gene08211:intron | 55.0% | |
| CGAAGTCGATGTAGTGAGGG+AGG | + | chr7.3:23027982-23028001 | None:intergenic | 55.0% | |
| CGACGAAGGGAGTTGAAAGG+GGG | + | chr7.3:23028048-23028067 | None:intergenic | 55.0% | |
| CGGCGAAGTCGATGTAGTGA+GGG | + | chr7.3:23027985-23028004 | None:intergenic | 55.0% | |
| CTCAGGAAGTTTGCGCCGTT+GGG | - | chr7.3:23028854-23028873 | MS.gene08211:intron | 55.0% | |
| GAGTTCCACGGTAGAGAACC+CGG | + | chr7.3:23028403-23028422 | None:intergenic | 55.0% | |
| GATCCTCCGGTCACCAACTT+CGG | + | chr7.3:23028547-23028566 | None:intergenic | 55.0% | |
| GATGTTACGACTGAGACGGG+AGG | + | chr7.3:23028026-23028045 | None:intergenic | 55.0% | |
| GATTGCTCCACTCCAGGTCA+GGG | + | chr7.3:23029357-23029376 | None:intergenic | 55.0% | |
| GCCAATCGAAGACGGTTACG+CGG | - | chr7.3:23027904-23027923 | MS.gene08211:CDS | 55.0% | |
| GCCGAAGGAGAGACGAAAAC+CGG | + | chr7.3:23028223-23028242 | None:intergenic | 55.0% | |
| GCGACGAAGGGAGTTGAAAG+GGG | + | chr7.3:23028049-23028068 | None:intergenic | 55.0% | |
| GCGTAACCGTCTTCGATTGG+CGG | + | chr7.3:23027905-23027924 | None:intergenic | 55.0% | |
| GGGGATGTTACGACTGAGAC+GGG | + | chr7.3:23028029-23028048 | None:intergenic | 55.0% | |
| GGGGGATGTTACGACTGAGA+CGG | + | chr7.3:23028030-23028049 | None:intergenic | 55.0% | |
| GGTGAAGGATGAAGAGGTGG+TGG | - | chr7.3:23028480-23028499 | MS.gene08211:intron | 55.0% | |
| GGTGAGAGGCTATCCGAAGT+TGG | - | chr7.3:23028531-23028550 | MS.gene08211:intron | 55.0% | |
| GTCCATAGGAGAAGCGACGA+AGG | + | chr7.3:23028062-23028081 | None:intergenic | 55.0% | |
| TAACCGTCTTCGATTGGCGG+AGG | + | chr7.3:23027902-23027921 | None:intergenic | 55.0% | |
| TAACGGCTCCAACAACCCCT+TGG | + | chr7.3:23030253-23030272 | None:intergenic | 55.0% | |
| TCCCTTCGTCGCTTCTCCTA+TGG | - | chr7.3:23028057-23028076 | MS.gene08211:intron | 55.0% | |
| TTGTGTGGCATACCCTGACC+TGG | - | chr7.3:23029342-23029361 | MS.gene08211:CDS | 55.0% | |
| ! | ACTGGAGCAGCACAGGTTGA+AGG | - | chr7.3:23031568-23031587 | MS.gene08211:CDS | 55.0% |
| ! | GGAGAGGTCGACTTCATCAG+CGG | + | chr7.3:23028005-23028024 | None:intergenic | 55.0% |
| !! | GAAGTTGGTGACCGGAGGAT+CGG | - | chr7.3:23028546-23028565 | MS.gene08211:intron | 55.0% |
| !! | GGCTATCCGAAGTTGGTGAC+CGG | - | chr7.3:23028538-23028557 | MS.gene08211:intron | 55.0% |
| !! | TATCCGAAGTTGGTGACCGG+AGG | - | chr7.3:23028541-23028560 | MS.gene08211:intron | 55.0% |
| AGAGAGGATAGGCACACGGC+GGG | + | chr7.3:23028197-23028216 | None:intergenic | 60.0% | |
| CAGAGAGGATAGGCACACGG+CGG | + | chr7.3:23028198-23028217 | None:intergenic | 60.0% | |
| CGGATGGAGAGTGGATGGTG+GGG | - | chr7.3:23028575-23028594 | MS.gene08211:intron | 60.0% | |
| GAGGAGGTTGAGAGGGTGAG+AGG | - | chr7.3:23028517-23028536 | MS.gene08211:intron | 60.0% | |
| GATACCACCAAGTGCGGCCA+TGG | + | chr7.3:23028113-23028132 | None:intergenic | 60.0% | |
| GCCGCGTAACCGTCTTCGAT+TGG | + | chr7.3:23027908-23027927 | None:intergenic | 60.0% | |
| GCGGATGGAGAGTGGATGGT+GGG | - | chr7.3:23028574-23028593 | MS.gene08211:intron | 60.0% | |
| GCGGCGAAGTCGATGTAGTG+AGG | + | chr7.3:23027986-23028005 | None:intergenic | 60.0% | |
| GGCCATGGCAGAAGCCATAG+AGG | + | chr7.3:23028098-23028117 | None:intergenic | 60.0% | |
| GGTATGCCACACAAGCCCCA+CGG | + | chr7.3:23029336-23029355 | None:intergenic | 60.0% | |
| GGTTCGTACTGGAGCAGCAC+AGG | - | chr7.3:23031561-23031580 | MS.gene08211:CDS | 60.0% | |
| TACGACTGAGACGGGAGGAG+AGG | + | chr7.3:23028021-23028040 | None:intergenic | 60.0% | |
| TGGCATACCCTGACCTGGAG+TGG | - | chr7.3:23029347-23029366 | MS.gene08211:CDS | 60.0% | |
| TGGTGACCGGAGGATCGGTT+GGG | - | chr7.3:23028551-23028570 | MS.gene08211:intron | 60.0% | |
| TTCCACGGTAGAGAACCCGG+TGG | + | chr7.3:23028400-23028419 | None:intergenic | 60.0% | |
| ! | GGAGCAGCACAGGTTGAAGG+AGG | - | chr7.3:23031571-23031590 | MS.gene08211:CDS | 60.0% |
| ! | GGATGGAGAGTGGATGGTGG+GGG | - | chr7.3:23028576-23028595 | MS.gene08211:intron | 60.0% |
| ! | GTGCTGCTCCAGTACGAACC+TGG | + | chr7.3:23031561-23031580 | None:intergenic | 60.0% |
| ! | TTGGTGACCGGAGGATCGGT+TGG | - | chr7.3:23028550-23028569 | MS.gene08211:intron | 60.0% |
| ATCCGCCCCAACCGATCCTC+CGG | + | chr7.3:23028560-23028579 | None:intergenic | 65.0% | |
| CTCCACCGGGTTCTCTACCG+TGG | - | chr7.3:23028395-23028414 | MS.gene08211:intron | 65.0% | |
| CTGGTAGTCTCGAGGCTCCC+GGG | - | chr7.3:23029714-23029733 | MS.gene08211:intron | 65.0% | |
| GAAGTTTGCGCCGTTGGGCG+TGG | - | chr7.3:23028859-23028878 | MS.gene08211:intron | 65.0% | |
| GATAGGCACACGGCGGGACT+TGG | + | chr7.3:23028191-23028210 | None:intergenic | 65.0% | |
| GCTGGTAGTCTCGAGGCTCC+CGG | - | chr7.3:23029713-23029732 | MS.gene08211:intron | 65.0% | |
| GCTTCTGCCATGGCCGCACT+TGG | - | chr7.3:23028103-23028122 | MS.gene08211:intron | 65.0% | |
| GGCGGATGGAGAGTGGATGG+TGG | - | chr7.3:23028573-23028592 | MS.gene08211:intron | 65.0% | |
| GGTGACCGGAGGATCGGTTG+GGG | - | chr7.3:23028552-23028571 | MS.gene08211:intron | 65.0% | |
| TCTGCCATGGCCGCACTTGG+TGG | - | chr7.3:23028106-23028125 | MS.gene08211:intron | 65.0% | |
| TGGGGCGGATGGAGAGTGGA+TGG | - | chr7.3:23028570-23028589 | MS.gene08211:intron | 65.0% | |
| TGGTAGTCTCGAGGCTCCCG+GGG | - | chr7.3:23029715-23029734 | MS.gene08211:intron | 65.0% | |
| !! | TGGAGAGTGGATGGTGGGGG+CGG | - | chr7.3:23028579-23028598 | MS.gene08211:intron | 65.0% |
| CACGGCGGGACTTGGCAGTC+CGG | + | chr7.3:23028183-23028202 | None:intergenic | 70.0% | |
| CGGTTGGGGCGGATGGAGAG+TGG | - | chr7.3:23028566-23028585 | MS.gene08211:intron | 70.0% | |
| GACCGGAGGATCGGTTGGGG+CGG | - | chr7.3:23028555-23028574 | MS.gene08211:intron | 70.0% | |
| GGAGGATCGGTTGGGGCGGA+TGG | - | chr7.3:23028559-23028578 | MS.gene08211:intron | 70.0% | |
| TTGCGCCGTTGGGCGTGGTC+AGG | - | chr7.3:23028864-23028883 | MS.gene08211:intron | 70.0% | |
| !! | GGATGGTGGGGGCGGCCATT+GGG | - | chr7.3:23028587-23028606 | MS.gene08211:intron | 70.0% |
| !! | TGGATGGTGGGGGCGGCCAT+TGG | - | chr7.3:23028586-23028605 | MS.gene08211:intron | 70.0% |
| GGGGGCGGCCATTGGGACGA+GGG | - | chr7.3:23028594-23028613 | MS.gene08211:intron | 75.0% | |
| TGGGGGCGGCCATTGGGACG+AGG | - | chr7.3:23028593-23028612 | MS.gene08211:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 23027887 | 23031633 | 23027887 | ID=MS.gene08211 |
| chr7.3 | mRNA | 23027887 | 23031633 | 23027887 | ID=MS.gene08211.t1;Parent=MS.gene08211 |
| chr7.3 | exon | 23030635 | 23031633 | 23030635 | ID=MS.gene08211.t1.exon1;Parent=MS.gene08211.t1 |
| chr7.3 | CDS | 23030635 | 23031633 | 23030635 | ID=cds.MS.gene08211.t1;Parent=MS.gene08211.t1 |
| chr7.3 | exon | 23029769 | 23029948 | 23029769 | ID=MS.gene08211.t1.exon2;Parent=MS.gene08211.t1 |
| chr7.3 | CDS | 23029769 | 23029948 | 23029769 | ID=cds.MS.gene08211.t1;Parent=MS.gene08211.t1 |
| chr7.3 | exon | 23029117 | 23029374 | 23029117 | ID=MS.gene08211.t1.exon3;Parent=MS.gene08211.t1 |
| chr7.3 | CDS | 23029117 | 23029374 | 23029117 | ID=cds.MS.gene08211.t1;Parent=MS.gene08211.t1 |
| chr7.3 | exon | 23027887 | 23027958 | 23027887 | ID=MS.gene08211.t1.exon4;Parent=MS.gene08211.t1 |
| chr7.3 | CDS | 23027887 | 23027958 | 23027887 | ID=cds.MS.gene08211.t1;Parent=MS.gene08211.t1 |
| Gene Sequence |
| Protein sequence |
