Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069038.t1 | XP_003623309.1 | 98.4 | 319 | 1 | 1 | 1 | 319 | 1 | 315 | 8.80E-180 | 639.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069038.t1 | Q9C928 | 77.5 | 320 | 69 | 2 | 1 | 319 | 1 | 318 | 7.1e-146 | 518.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069038.t1 | G7KSA6 | 98.4 | 319 | 1 | 1 | 1 | 319 | 1 | 315 | 6.3e-180 | 639.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069038.t1 | MTR_7g069430 | 98.433 | 319 | 1 | 1 | 1 | 319 | 1 | 315 | 0.0 | 644 |
| MS.gene069038.t1 | MTR_1g012990 | 97.806 | 319 | 5 | 1 | 1 | 319 | 1 | 317 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069038.t1 | AT3G15460 | 79.439 | 321 | 57 | 4 | 1 | 319 | 1 | 314 | 0.0 | 520 |
| MS.gene069038.t1 | AT1G52930 | 77.500 | 320 | 69 | 2 | 1 | 319 | 1 | 318 | 0.0 | 503 |
Find 68 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATTGTTGATGACCATATA+TGG | 0.264455 | 7.2:+34125744 | MS.gene069038:CDS |
| GCTCTAGGCGTATTGTTTAC+AGG | 0.279178 | 7.2:+34123676 | MS.gene069038:CDS |
| AAAATATTCGGTGGCAGTTT+TGG | 0.285272 | 7.2:+34126835 | MS.gene069038:CDS |
| GTTGAAGGAGATGCTGTTAC+AGG | 0.303915 | 7.2:+34125196 | MS.gene069038:CDS |
| ATGGAGGAATTGAAGCTTAC+TGG | 0.304877 | 7.2:+34125101 | MS.gene069038:CDS |
| GAGACCAGTGAGGACCCTTT+TGG | 0.316595 | 7.2:+34123557 | MS.gene069038:CDS |
| GGTAATTTCGGAACCATATA+TGG | 0.326418 | 7.2:-34125757 | None:intergenic |
| ATGGTGCTTCACCTGTATTC+AGG | 0.342543 | 7.2:+34123628 | MS.gene069038:CDS |
| TTGAATCCGATTAAAATATT+CGG | 0.352118 | 7.2:+34126823 | MS.gene069038:CDS |
| TTCTCTTTGTTCCTGAATAC+AGG | 0.355373 | 7.2:-34123639 | None:intergenic |
| AAACACAAACCTGGTAATTT+CGG | 0.365107 | 7.2:-34125769 | None:intergenic |
| GCTTCTGCCTCATTGCAAAA+AGG | 0.366733 | 7.2:+34124218 | MS.gene069038:CDS |
| CTTACTGGGAATCACCTAAA+AGG | 0.369692 | 7.2:+34125116 | MS.gene069038:CDS |
| GAAATTGAGGCTAAGGATAA+TGG | 0.372435 | 7.2:+34123609 | MS.gene069038:CDS |
| AGGGTCCTCACTGGTCTCTC+TGG | 0.383639 | 7.2:-34123552 | None:intergenic |
| AATTTAACAGACGGGCCGTT+GGG | 0.387269 | 7.2:-34124877 | None:intergenic |
| AGCTGAGGCCGTGCCCAAAA+AGG | 0.387341 | 7.2:+34123518 | MS.gene069038:CDS |
| CCGACATTTGATGTTGAACT+TGG | 0.401652 | 7.2:+34124191 | MS.gene069038:CDS |
| AGCTTTGCAGAAGAAGAAAA+AGG | 0.403828 | 7.2:+34127012 | MS.gene069038:CDS |
| CAGGAACAAAGAGAAAGTTT+TGG | 0.404050 | 7.2:+34123647 | MS.gene069038:CDS |
| GGCTGGAACGTTTGCAAAGA+AGG | 0.416450 | 7.2:+34127033 | MS.gene069038:CDS |
| GAGCTCAACAAGCTCATTCA+AGG | 0.439282 | 7.2:-34124277 | None:intergenic |
| TTAGCCTTTCTGTGGTCCTT+CGG | 0.446280 | 7.2:-34125692 | None:intergenic |
| TCTTATCCTTCCATCCCAAA+AGG | 0.448553 | 7.2:-34123572 | None:intergenic |
| AGGCAAAAGATCTTTATCTC+TGG | 0.470351 | 7.2:+34124842 | MS.gene069038:CDS |
| CACATATCAGCAAACTCATC+AGG | 0.477546 | 7.2:-34127106 | None:intergenic |
| TGATAAAATGACATTGATTG+AGG | 0.479641 | 7.2:+34126699 | MS.gene069038:CDS |
| TGAGAATGAAATTGAGGCTA+AGG | 0.482199 | 7.2:+34123602 | MS.gene069038:CDS |
| GGTTGAATCGAAAGAAACTA+AGG | 0.485204 | 7.2:+34124248 | MS.gene069038:CDS |
| TTTGATGAAAATGTCAAAAG+AGG | 0.486922 | 7.2:-34125146 | None:intergenic |
| TGCCTACTGGAAATTGTTGA+AGG | 0.494789 | 7.2:+34125181 | MS.gene069038:CDS |
| CTCATCAGGCTCAAGAGGAT+TGG | 0.499362 | 7.2:-34127092 | None:intergenic |
| AAATTTAACAGACGGGCCGT+TGG | 0.517299 | 7.2:-34124878 | None:intergenic |
| TATATGGTTCCGAAATTACC+AGG | 0.519157 | 7.2:+34125760 | MS.gene069038:CDS |
| TGGAGGAATTGAAGCTTACT+GGG | 0.524362 | 7.2:+34125102 | MS.gene069038:CDS |
| CTTATCCTTCCATCCCAAAA+GGG | 0.530204 | 7.2:-34123571 | None:intergenic |
| GAAGAGAAAGCGAAGTGAAA+AGG | 0.534401 | 7.2:+34123491 | MS.gene069038:CDS |
| GTGGATTCTCATATAAAGTC+GGG | 0.536289 | 7.2:-34126861 | None:intergenic |
| TGATAATGAGAATGAAATTG+AGG | 0.547214 | 7.2:+34123596 | MS.gene069038:CDS |
| CATCCCAAAAGGGTCCTCAC+TGG | 0.551306 | 7.2:-34123561 | None:intergenic |
| ACTCTACGTGTCGCCAAACC+AGG | 0.562370 | 7.2:+34126882 | MS.gene069038:CDS |
| AAAAGATCTTTATCTCTGGA+TGG | 0.569362 | 7.2:+34124846 | MS.gene069038:CDS |
| GCAAACTCATCAGGCTCAAG+AGG | 0.570989 | 7.2:-34127097 | None:intergenic |
| GGAAAGGCTTAGCCTTTCTG+TGG | 0.574310 | 7.2:-34125700 | None:intergenic |
| TACTTGTTTAGGTTGGTCCA+CGG | 0.580063 | 7.2:+34126794 | MS.gene069038:intron |
| ATTTAACAGACGGGCCGTTG+GGG | 0.581078 | 7.2:-34124876 | None:intergenic |
| AGTGGATTCTCATATAAAGT+CGG | 0.583639 | 7.2:-34126862 | None:intergenic |
| TGGTTTGGCGACACGTAGAG+TGG | 0.584267 | 7.2:-34126880 | None:intergenic |
| AATCCGATTAAAATATTCGG+TGG | 0.588458 | 7.2:+34126826 | MS.gene069038:CDS |
| AAGGAGGAAAATGCATGAGA+TGG | 0.589573 | 7.2:+34127069 | MS.gene069038:CDS |
| CTGATGAGTTTGCTGATATG+TGG | 0.601778 | 7.2:+34127107 | MS.gene069038:CDS |
| AACACCGAAGGACCACAGAA+AGG | 0.602217 | 7.2:+34125688 | MS.gene069038:CDS |
| AGAAGGTCAAAGCAAAGACA+AGG | 0.616949 | 7.2:+34127050 | MS.gene069038:CDS |
| TGGATGGCAAAATGCCCCAA+CGG | 0.618112 | 7.2:+34124862 | MS.gene069038:CDS |
| AATTTGTCTGACTCATTGTG+AGG | 0.622655 | 7.2:-34126661 | None:intergenic |
| GTTGAATCGAAAGAAACTAA+GGG | 0.624547 | 7.2:+34124249 | MS.gene069038:CDS |
| ATCGGATTCAAGCAAAACCG+TGG | 0.627328 | 7.2:-34126811 | None:intergenic |
| AAGTGAAAAGGCTGAAGCTG+AGG | 0.628246 | 7.2:+34123503 | MS.gene069038:CDS |
| ATGTGAATTTCAGTGCAGGA+AGG | 0.635761 | 7.2:+34124822 | MS.gene069038:intron |
| CTTTCCAGTGCACACAATGG+AGG | 0.635931 | 7.2:+34125085 | MS.gene069038:intron |
| CTGCTTTCCAGTGCACACAA+TGG | 0.638507 | 7.2:+34125082 | MS.gene069038:intron |
| AGGTCAAAGCAAAGACAAGG+AGG | 0.640567 | 7.2:+34127053 | MS.gene069038:CDS |
| CTCCTTCAACAATTTCCAGT+AGG | 0.641922 | 7.2:-34125183 | None:intergenic |
| CCAAGTTCAACATCAAATGT+CGG | 0.645758 | 7.2:-34124191 | None:intergenic |
| CTCAACAAGCTCATTCAAGG+TGG | 0.661049 | 7.2:-34124274 | None:intergenic |
| CCAGATATTTGAAACACCGA+AGG | 0.677611 | 7.2:+34125676 | MS.gene069038:intron |
| TTGCTCCAGAGAGACCAGTG+AGG | 0.749614 | 7.2:+34123547 | MS.gene069038:CDS |
| GAGTCAGACAAATTACCCCG+TGG | 0.753852 | 7.2:+34126670 | MS.gene069038:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAATTAATGTCAAA+TGG | + | chr7.2:34123864-34123883 | MS.gene069038:intron | 10.0% |
| !!! | TAAATATCAACATTTTTTTA+GGG | - | chr7.2:34124481-34124500 | None:intergenic | 10.0% |
| !! | ATTATTTAAATTTATCTACG+GGG | - | chr7.2:34124020-34124039 | None:intergenic | 15.0% |
| !! | ATTGATCATAAACTTATTAT+AGG | + | chr7.2:34124166-34124185 | MS.gene069038:intron | 15.0% |
| !! | CATTATTTAAATTTATCTAC+GGG | - | chr7.2:34124021-34124040 | None:intergenic | 15.0% |
| !! | GCATTATTTAAATTTATCTA+CGG | - | chr7.2:34124022-34124041 | None:intergenic | 15.0% |
| !! | TTGCAAAAGATTTAAATAAT+TGG | + | chr7.2:34125796-34125815 | MS.gene069038:intron | 15.0% |
| !!! | CTAAATATCAACATTTTTTT+AGG | - | chr7.2:34124482-34124501 | None:intergenic | 15.0% |
| !!! | CTACACTTTAAAATTTAAAA+TGG | - | chr7.2:34124612-34124631 | None:intergenic | 15.0% |
| !!! | TAAACATTTTTTATGACATA+AGG | + | chr7.2:34124340-34124359 | MS.gene069038:intron | 15.0% |
| !!! | TCATAATATCATATTTCTAT+TGG | - | chr7.2:34126146-34126165 | None:intergenic | 15.0% |
| !!! | TTTGCTTATTTTATAATGTA+TGG | + | chr7.2:34126465-34126484 | MS.gene069038:intron | 15.0% |
| !! | AAATACATAGAAAACCAATT+TGG | - | chr7.2:34124662-34124681 | None:intergenic | 20.0% |
| !! | AAGTCTATAAATGTTATGTT+TGG | + | chr7.2:34125436-34125455 | MS.gene069038:intron | 20.0% |
| !! | AATACATAGAAAACCAATTT+GGG | - | chr7.2:34124661-34124680 | None:intergenic | 20.0% |
| !! | AATACTATATAATCATAGCA+AGG | - | chr7.2:34124966-34124985 | None:intergenic | 20.0% |
| !! | CTAACTAAAAATTTAACAGA+CGG | - | chr7.2:34124889-34124908 | None:intergenic | 20.0% |
| !! | CTATGATTATATAGTATTCT+AGG | + | chr7.2:34124968-34124987 | MS.gene069038:intron | 20.0% |
| !! | TAAAAGAGAAACTAGTAAAA+TGG | - | chr7.2:34125056-34125075 | None:intergenic | 20.0% |
| !! | TAACTAAAAATTTAACAGAC+GGG | - | chr7.2:34124888-34124907 | None:intergenic | 20.0% |
| !! | TACTGAAAATAACTACATAT+TGG | + | chr7.2:34126953-34126972 | MS.gene069038:intron | 20.0% |
| !! | TCTATTGTCATATATCTATA+TGG | + | chr7.2:34125378-34125397 | MS.gene069038:intron | 20.0% |
| !! | TGATAATTTAAACAAGATAG+AGG | + | chr7.2:34126494-34126513 | MS.gene069038:intron | 20.0% |
| !! | TTGAATCCGATTAAAATATT+CGG | + | chr7.2:34126823-34126842 | MS.gene069038:CDS | 20.0% |
| !!! | AATTTTAATTGTGTAGAATG+CGG | + | chr7.2:34125476-34125495 | MS.gene069038:intron | 20.0% |
| !!! | AGTAAATGATTGTTTTACTA+TGG | + | chr7.2:34126225-34126244 | MS.gene069038:intron | 20.0% |
| !!! | CAGTTTACTTATTTTAAATC+TGG | + | chr7.2:34124685-34124704 | MS.gene069038:intron | 20.0% |
| !!! | GTTTAAACTTTAAAATCTGT+TGG | + | chr7.2:34125853-34125872 | MS.gene069038:intron | 20.0% |
| !!! | TATAATTATGCCAATTGTTT+TGG | + | chr7.2:34125930-34125949 | MS.gene069038:intron | 20.0% |
| !!! | TGATATAGTATATAAGGTTT+TGG | - | chr7.2:34126198-34126217 | None:intergenic | 20.0% |
| !!! | TTGTTTATTTTGGTTATGTT+TGG | + | chr7.2:34123766-34123785 | MS.gene069038:intron | 20.0% |
| ! | ACAAACAGATAGAATATTAC+CGG | - | chr7.2:34124914-34124933 | None:intergenic | 25.0% |
| ! | ACATCAGTTAAATGAATCTT+AGG | - | chr7.2:34126766-34126785 | None:intergenic | 25.0% |
| ! | AGTTAAGTTATTATGCTGTA+AGG | + | chr7.2:34123799-34123818 | MS.gene069038:intron | 25.0% |
| ! | CTAATGCAATATGTTATTGT+TGG | + | chr7.2:34124504-34124523 | MS.gene069038:intron | 25.0% |
| ! | CTTCGTTGATATAGTATATA+AGG | - | chr7.2:34126204-34126223 | None:intergenic | 25.0% |
| ! | GAAAATTGACTGTTTGTTTA+TGG | + | chr7.2:34124421-34124440 | MS.gene069038:intron | 25.0% |
| ! | GGATACAGCAAAATATATTT+GGG | - | chr7.2:34123716-34123735 | None:intergenic | 25.0% |
| ! | GTTAAGTTATTATGCTGTAA+GGG | + | chr7.2:34123800-34123819 | MS.gene069038:intron | 25.0% |
| ! | TATAATCATAGCAAGGAAAT+TGG | - | chr7.2:34124959-34124978 | None:intergenic | 25.0% |
| ! | TCTAGTCTATTTGTAACATT+TGG | + | chr7.2:34124771-34124790 | MS.gene069038:intron | 25.0% |
| ! | TTGAGTTATGTATTTGAAGA+GGG | + | chr7.2:34125549-34125568 | MS.gene069038:intron | 25.0% |
| ! | TTTGATGAAAATGTCAAAAG+AGG | - | chr7.2:34125149-34125168 | None:intergenic | 25.0% |
| !! | AATCTGTTTCCTTTTTGTTA+TGG | + | chr7.2:34124545-34124564 | MS.gene069038:intron | 25.0% |
| !! | AGTGTACATTGAGAATATTT+TGG | - | chr7.2:34126914-34126933 | None:intergenic | 25.0% |
| !! | TGATAAAATGACATTGATTG+AGG | + | chr7.2:34126699-34126718 | MS.gene069038:CDS | 25.0% |
| !! | TGATAATGAGAATGAAATTG+AGG | + | chr7.2:34123596-34123615 | MS.gene069038:CDS | 25.0% |
| !! | TGATGACTTTTATACTAATC+CGG | + | chr7.2:34126432-34126451 | MS.gene069038:intron | 25.0% |
| !! | TTCACAATTTTCTGTAGTTT+TGG | + | chr7.2:34125517-34125536 | MS.gene069038:intron | 25.0% |
| !!! | ACTTCTTTGACTTTTATTGT+GGG | + | chr7.2:34124122-34124141 | MS.gene069038:intron | 25.0% |
| !!! | AGTTTTGGATTCAAAAGTTA+AGG | + | chr7.2:34125247-34125266 | MS.gene069038:intron | 25.0% |
| !!! | ATAGAGGTATTATTTTATGC+TGG | + | chr7.2:34126510-34126529 | MS.gene069038:intron | 25.0% |
| !!! | ATTGTTTTACTATGGTTACA+TGG | + | chr7.2:34126233-34126252 | MS.gene069038:intron | 25.0% |
| !!! | ATTTTAATTGTGTAGAATGC+GGG | + | chr7.2:34125477-34125496 | MS.gene069038:intron | 25.0% |
| !!! | CAATCAATGTCATTTTATCA+AGG | - | chr7.2:34126699-34126718 | None:intergenic | 25.0% |
| !!! | GAGTTTGGATTTGTTTATTT+TGG | + | chr7.2:34123756-34123775 | MS.gene069038:intron | 25.0% |
| !!! | GCTTATTTTATAATGTATGG+AGG | + | chr7.2:34126468-34126487 | MS.gene069038:intron | 25.0% |
| !!! | GTTAAATTTTTAGTTAGTGC+CGG | + | chr7.2:34124892-34124911 | MS.gene069038:CDS | 25.0% |
| !!! | TACTTCTTTGACTTTTATTG+TGG | + | chr7.2:34124121-34124140 | MS.gene069038:intron | 25.0% |
| !!! | TCTATCTGTTTGTTATCTTA+AGG | + | chr7.2:34124921-34124940 | MS.gene069038:intron | 25.0% |
| AAAAGATCTTTATCTCTGGA+TGG | + | chr7.2:34124846-34124865 | MS.gene069038:CDS | 30.0% | |
| AAACACAAACCTGGTAATTT+CGG | - | chr7.2:34125772-34125791 | None:intergenic | 30.0% | |
| AACTACAGAAAATTGTGAAC+AGG | - | chr7.2:34125516-34125535 | None:intergenic | 30.0% | |
| AACTCAAACTCGAGATTAAA+TGG | - | chr7.2:34124729-34124748 | None:intergenic | 30.0% | |
| AATCCGATTAAAATATTCGG+TGG | + | chr7.2:34126826-34126845 | MS.gene069038:CDS | 30.0% | |
| ATAAGCAAAATTAAGTCCAC+CGG | - | chr7.2:34126454-34126473 | None:intergenic | 30.0% | |
| ATACAACTTTCGATCATACT+AGG | - | chr7.2:34125333-34125352 | None:intergenic | 30.0% | |
| ATACTTAAGCCTGTTTGTAA+AGG | - | chr7.2:34126083-34126102 | None:intergenic | 30.0% | |
| CAAAAAGAAGAATGAAGAAC+TGG | - | chr7.2:34125003-34125022 | None:intergenic | 30.0% | |
| CGGATACAGCAAAATATATT+TGG | - | chr7.2:34123717-34123736 | None:intergenic | 30.0% | |
| CTGAAATTCACATACAAAGA+AGG | - | chr7.2:34124815-34124834 | None:intergenic | 30.0% | |
| CTTGAGTTATGTATTTGAAG+AGG | + | chr7.2:34125548-34125567 | MS.gene069038:intron | 30.0% | |
| GTTGAATCGAAAGAAACTAA+GGG | + | chr7.2:34124249-34124268 | MS.gene069038:CDS | 30.0% | |
| GTTGTATCCATAAACTATCT+TGG | + | chr7.2:34123905-34123924 | MS.gene069038:intron | 30.0% | |
| TAGTCTAGGAGAAAAGAAAA+TGG | + | chr7.2:34126324-34126343 | MS.gene069038:intron | 30.0% | |
| TCACTCTAAGTCAAAAACTA+TGG | - | chr7.2:34125960-34125979 | None:intergenic | 30.0% | |
| TCATTGCAAAAAGGATAACA+AGG | + | chr7.2:34124227-34124246 | MS.gene069038:CDS | 30.0% | |
| TCGATAATACCATCTTAGTT+TGG | + | chr7.2:34125275-34125294 | MS.gene069038:intron | 30.0% | |
| TGAGTTATGTATTTGAAGAG+GGG | + | chr7.2:34125550-34125569 | MS.gene069038:intron | 30.0% | |
| TTATAGACTTCTCAAGTCAA+CGG | - | chr7.2:34125426-34125445 | None:intergenic | 30.0% | |
| TTGCGTAATCCATAACAAAA+AGG | - | chr7.2:34124557-34124576 | None:intergenic | 30.0% | |
| ! | AGAAAATGGATTCTTCACAT+AGG | + | chr7.2:34126338-34126357 | MS.gene069038:intron | 30.0% |
| ! | AGTGGATTCTCATATAAAGT+CGG | - | chr7.2:34126865-34126884 | None:intergenic | 30.0% |
| ! | ATAATACCATCTTAGTTTGG+TGG | + | chr7.2:34125278-34125297 | MS.gene069038:intron | 30.0% |
| ! | TTGTTATCCTTTTTGCAATG+AGG | - | chr7.2:34124228-34124247 | None:intergenic | 30.0% |
| !! | ATTTTGAAAAAGATGCCTAC+TGG | + | chr7.2:34125168-34125187 | MS.gene069038:CDS | 30.0% |
| !! | CAAATTAAAGCATTAGCCTT+AGG | + | chr7.2:34126055-34126074 | MS.gene069038:intron | 30.0% |
| !! | TGACTTTTATTGTGGGTTAT+TGG | + | chr7.2:34124129-34124148 | MS.gene069038:intron | 30.0% |
| !!! | ACTGATTTTTTGTAAACCAC+TGG | + | chr7.2:34126266-34126285 | MS.gene069038:intron | 30.0% |
| !!! | ACTTGCATTTTTTTCAGATG+TGG | + | chr7.2:34126536-34126555 | MS.gene069038:intron | 30.0% |
| !!! | AGAATATTTTGGTTGTTACC+TGG | - | chr7.2:34126903-34126922 | None:intergenic | 30.0% |
| !!! | TTCGTCGTGTTTATTTTTTG+AGG | + | chr7.2:34124308-34124327 | MS.gene069038:CDS | 30.0% |
| AAACACTTGTGAGACTGTTA+GGG | - | chr7.2:34123994-34124013 | None:intergenic | 35.0% | |
| AAATCACCACCAAACTAAGA+TGG | - | chr7.2:34125287-34125306 | None:intergenic | 35.0% | |
| AATTTGTCTGACTCATTGTG+AGG | - | chr7.2:34126664-34126683 | None:intergenic | 35.0% | |
| ACATAGAAAACCAATTTGGG+AGG | - | chr7.2:34124658-34124677 | None:intergenic | 35.0% | |
| ACTTGCTCGAGATTAATAAC+TGG | - | chr7.2:34124752-34124771 | None:intergenic | 35.0% | |
| AGAAAACAAAAACGTGGTCA+TGG | - | chr7.2:34125724-34125743 | None:intergenic | 35.0% | |
| AGAAACTAGTAAAATGGCCT+CGG | - | chr7.2:34125050-34125069 | None:intergenic | 35.0% | |
| AGCAATGTTAGCAAAGAAAG+AGG | - | chr7.2:34126007-34126026 | None:intergenic | 35.0% | |
| AGCTTTGCAGAAGAAGAAAA+AGG | + | chr7.2:34127012-34127031 | MS.gene069038:CDS | 35.0% | |
| AGGCAAAAGATCTTTATCTC+TGG | + | chr7.2:34124842-34124861 | MS.gene069038:CDS | 35.0% | |
| ATAGAAAACCAATTTGGGAG+GGG | - | chr7.2:34124656-34124675 | None:intergenic | 35.0% | |
| ATTGATTGAGGTCTGCAAAT+TGG | + | chr7.2:34126711-34126730 | MS.gene069038:intron | 35.0% | |
| ATTGTCTACACTTCTAGTCT+AGG | + | chr7.2:34126310-34126329 | MS.gene069038:intron | 35.0% | |
| CAATCGAGAAAACAAAAACG+TGG | - | chr7.2:34125730-34125749 | None:intergenic | 35.0% | |
| CATAGAAAACCAATTTGGGA+GGG | - | chr7.2:34124657-34124676 | None:intergenic | 35.0% | |
| CCAAGTTCAACATCAAATGT+CGG | - | chr7.2:34124194-34124213 | None:intergenic | 35.0% | |
| CTATGGCTAACCAAAACAAT+TGG | - | chr7.2:34125943-34125962 | None:intergenic | 35.0% | |
| GAAATTGAGGCTAAGGATAA+TGG | + | chr7.2:34123609-34123628 | MS.gene069038:CDS | 35.0% | |
| GGTAATTTCGGAACCATATA+TGG | - | chr7.2:34125760-34125779 | None:intergenic | 35.0% | |
| GGTTGAATCGAAAGAAACTA+AGG | + | chr7.2:34124248-34124267 | MS.gene069038:CDS | 35.0% | |
| GTGGATTCTCATATAAAGTC+GGG | - | chr7.2:34126864-34126883 | None:intergenic | 35.0% | |
| TAAACACTTGTGAGACTGTT+AGG | - | chr7.2:34123995-34124014 | None:intergenic | 35.0% | |
| TACATGATAATAGCATCCAG+TGG | - | chr7.2:34126285-34126304 | None:intergenic | 35.0% | |
| TATATGGTTCCGAAATTACC+AGG | + | chr7.2:34125760-34125779 | MS.gene069038:CDS | 35.0% | |
| TGAGAATGAAATTGAGGCTA+AGG | + | chr7.2:34123602-34123621 | MS.gene069038:CDS | 35.0% | |
| TGCTAAAAACAAATAAGCGC+TGG | + | chr7.2:34125898-34125917 | MS.gene069038:intron | 35.0% | |
| TTCTCTTTGTTCCTGAATAC+AGG | - | chr7.2:34123642-34123661 | None:intergenic | 35.0% | |
| TTCTTTGCTAACATTGCTGA+TGG | + | chr7.2:34126009-34126028 | MS.gene069038:intron | 35.0% | |
| TTGTATGTGAATTTCAGTGC+AGG | + | chr7.2:34124818-34124837 | MS.gene069038:intron | 35.0% | |
| ! | AACATTGCTGATGGATAAAC+TGG | + | chr7.2:34126018-34126037 | MS.gene069038:intron | 35.0% |
| ! | ACATTGCTGATGGATAAACT+GGG | + | chr7.2:34126019-34126038 | MS.gene069038:intron | 35.0% |
| ! | CAGGAACAAAGAGAAAGTTT+TGG | + | chr7.2:34123647-34123666 | MS.gene069038:CDS | 35.0% |
| ! | TACTCTTCTATGCACAGTTT+TGG | + | chr7.2:34125232-34125251 | MS.gene069038:intron | 35.0% |
| ! | TCATTTTATCAAGGCTTCCA+CGG | - | chr7.2:34126690-34126709 | None:intergenic | 35.0% |
| ! | TGACTTTTATACTAATCCGG+TGG | + | chr7.2:34126435-34126454 | MS.gene069038:intron | 35.0% |
| ! | TTTTCTTCTTCTGCAAAGCT+CGG | - | chr7.2:34127012-34127031 | None:intergenic | 35.0% |
| !! | AAAATATTCGGTGGCAGTTT+TGG | + | chr7.2:34126835-34126854 | MS.gene069038:CDS | 35.0% |
| !! | ATCTTAGTTTGGTGGTGATT+TGG | + | chr7.2:34125286-34125305 | MS.gene069038:intron | 35.0% |
| !! | CGATTGTTGATGACCATATA+TGG | + | chr7.2:34125744-34125763 | MS.gene069038:CDS | 35.0% |
| !! | TCTTAGTTTGGTGGTGATTT+GGG | + | chr7.2:34125287-34125306 | MS.gene069038:intron | 35.0% |
| !!! | AAGTTTTGGTTACTTGCTCT+AGG | + | chr7.2:34123661-34123680 | MS.gene069038:CDS | 35.0% |
| !!! | ATTTTGGTTGTTACCTGGTT+TGG | - | chr7.2:34126898-34126917 | None:intergenic | 35.0% |
| !!! | CTGCCACCGAATATTTTAAT+CGG | - | chr7.2:34126832-34126851 | None:intergenic | 35.0% |
| !!! | GGGTTATTGGCTTTTGAATA+TGG | + | chr7.2:34124142-34124161 | MS.gene069038:intron | 35.0% |
| !!! | GTTTGTGCTTGTTTTGAGTT+TGG | + | chr7.2:34123741-34123760 | MS.gene069038:intron | 35.0% |
| AAACTATCTTGGAGAGCTCA+TGG | + | chr7.2:34123916-34123935 | MS.gene069038:intron | 40.0% | |
| AAGGAGGAAAATGCATGAGA+TGG | + | chr7.2:34127069-34127088 | MS.gene069038:CDS | 40.0% | |
| ACAAAAACGTGGTCATGGAA+AGG | - | chr7.2:34125719-34125738 | None:intergenic | 40.0% | |
| AGAAGGTCAAAGCAAAGACA+AGG | + | chr7.2:34127050-34127069 | MS.gene069038:CDS | 40.0% | |
| ATGGAGGAATTGAAGCTTAC+TGG | + | chr7.2:34125101-34125120 | MS.gene069038:CDS | 40.0% | |
| ATGTGAATTTCAGTGCAGGA+AGG | + | chr7.2:34124822-34124841 | MS.gene069038:intron | 40.0% | |
| CAAAACAAGCACAAACTGTG+CGG | - | chr7.2:34123737-34123756 | None:intergenic | 40.0% | |
| CACATATCAGCAAACTCATC+AGG | - | chr7.2:34127109-34127128 | None:intergenic | 40.0% | |
| CCGACATTTGATGTTGAACT+TGG | + | chr7.2:34124191-34124210 | MS.gene069038:CDS | 40.0% | |
| CCTGTTTGTAAAGGAACCTA+AGG | - | chr7.2:34126074-34126093 | None:intergenic | 40.0% | |
| CCTTAGGTTCCTTTACAAAC+AGG | + | chr7.2:34126071-34126090 | MS.gene069038:intron | 40.0% | |
| CTCCTTCAACAATTTCCAGT+AGG | - | chr7.2:34125186-34125205 | None:intergenic | 40.0% | |
| CTTACTGGGAATCACCTAAA+AGG | + | chr7.2:34125116-34125135 | MS.gene069038:CDS | 40.0% | |
| CTTATCCTTCCATCCCAAAA+GGG | - | chr7.2:34123574-34123593 | None:intergenic | 40.0% | |
| GAAGAGAAAGCGAAGTGAAA+AGG | + | chr7.2:34123491-34123510 | MS.gene069038:CDS | 40.0% | |
| GACTGTTTGTTTATGGTGTG+AGG | + | chr7.2:34124428-34124447 | MS.gene069038:intron | 40.0% | |
| GAGATGCTGTTACAGGTATT+TGG | + | chr7.2:34125203-34125222 | MS.gene069038:intron | 40.0% | |
| GAGCTCTCCAAGATAGTTTA+TGG | - | chr7.2:34123915-34123934 | None:intergenic | 40.0% | |
| TATGTATTTGAAGAGGGGTG+TGG | + | chr7.2:34125555-34125574 | MS.gene069038:intron | 40.0% | |
| TCTTATCCTTCCATCCCAAA+AGG | - | chr7.2:34123575-34123594 | None:intergenic | 40.0% | |
| TGCAAATGCAAACACAAACC+TGG | - | chr7.2:34125781-34125800 | None:intergenic | 40.0% | |
| TGCAAGCTACTTGTTTAGGT+TGG | + | chr7.2:34126787-34126806 | MS.gene069038:intron | 40.0% | |
| TGCCTACTGGAAATTGTTGA+AGG | + | chr7.2:34125181-34125200 | MS.gene069038:CDS | 40.0% | |
| TGGAGGAATTGAAGCTTACT+GGG | + | chr7.2:34125102-34125121 | MS.gene069038:CDS | 40.0% | |
| TGTGTGCAAGCTACTTGTTT+AGG | + | chr7.2:34126783-34126802 | MS.gene069038:intron | 40.0% | |
| TTGCAGAAGAAGAAAAAGGC+TGG | + | chr7.2:34127016-34127035 | MS.gene069038:CDS | 40.0% | |
| ! | ATTTTATCAAGGCTTCCACG+GGG | - | chr7.2:34126688-34126707 | None:intergenic | 40.0% |
| ! | CATTTTATCAAGGCTTCCAC+GGG | - | chr7.2:34126689-34126708 | None:intergenic | 40.0% |
| ! | CCAGATATTTGAAACACCGA+AGG | + | chr7.2:34125676-34125695 | MS.gene069038:intron | 40.0% |
| !! | CCTTCGGTGTTTCAAATATC+TGG | - | chr7.2:34125679-34125698 | None:intergenic | 40.0% |
| !! | CTGATGAGTTTGCTGATATG+TGG | + | chr7.2:34127107-34127126 | MS.gene069038:CDS | 40.0% |
| !! | CTTAGTTTGGTGGTGATTTG+GGG | + | chr7.2:34125288-34125307 | MS.gene069038:intron | 40.0% |
| !! | GTTATGTTTGGCTCTTGTCA+TGG | + | chr7.2:34125448-34125467 | MS.gene069038:intron | 40.0% |
| !! | TACTTGTTTAGGTTGGTCCA+CGG | + | chr7.2:34126794-34126813 | MS.gene069038:intron | 40.0% |
| !! | TTAGTTTGGTGGTGATTTGG+GGG | + | chr7.2:34125289-34125308 | MS.gene069038:intron | 40.0% |
| AAATTTAACAGACGGGCCGT+TGG | - | chr7.2:34124881-34124900 | None:intergenic | 45.0% | |
| AAGTGAAAAGGCTGAAGCTG+AGG | + | chr7.2:34123503-34123522 | MS.gene069038:CDS | 45.0% | |
| AATTCCTCCATTGTGTGCAC+TGG | - | chr7.2:34125092-34125111 | None:intergenic | 45.0% | |
| AATTTAACAGACGGGCCGTT+GGG | - | chr7.2:34124880-34124899 | None:intergenic | 45.0% | |
| ACGCTACCACATGTGATTGA+CGG | + | chr7.2:34126383-34126402 | MS.gene069038:intron | 45.0% | |
| AGGTCAAAGCAAAGACAAGG+AGG | + | chr7.2:34127053-34127072 | MS.gene069038:CDS | 45.0% | |
| ATCGGATTCAAGCAAAACCG+TGG | - | chr7.2:34126814-34126833 | None:intergenic | 45.0% | |
| ATGGTGCTTCACCTGTATTC+AGG | + | chr7.2:34123628-34123647 | MS.gene069038:CDS | 45.0% | |
| CAATTTGGGAGGGGAAACAA+AGG | - | chr7.2:34124647-34124666 | None:intergenic | 45.0% | |
| CTCAACAAGCTCATTCAAGG+TGG | - | chr7.2:34124277-34124296 | None:intergenic | 45.0% | |
| GAGCTCAACAAGCTCATTCA+AGG | - | chr7.2:34124280-34124299 | None:intergenic | 45.0% | |
| GCTTCTGCCTCATTGCAAAA+AGG | + | chr7.2:34124218-34124237 | MS.gene069038:CDS | 45.0% | |
| GTAGATCCGTCAATCACATG+TGG | - | chr7.2:34126392-34126411 | None:intergenic | 45.0% | |
| GTTGAAGGAGATGCTGTTAC+AGG | + | chr7.2:34125196-34125215 | MS.gene069038:CDS | 45.0% | |
| ! | AAAGAGGACGAGAGCCTTTT+AGG | - | chr7.2:34125133-34125152 | None:intergenic | 45.0% |
| ! | AATCACATGTGGTAGCGTCA+TGG | - | chr7.2:34126381-34126400 | None:intergenic | 45.0% |
| ! | CTGCACACAAAGAGCTTGTT+TGG | - | chr7.2:34124048-34124067 | None:intergenic | 45.0% |
| ! | CTTTGTTTCCCCTCCCAAAT+TGG | + | chr7.2:34124645-34124664 | MS.gene069038:intron | 45.0% |
| ! | GCTCTAGGCGTATTGTTTAC+AGG | + | chr7.2:34123676-34123695 | MS.gene069038:CDS | 45.0% |
| ! | GGAGCAACATCCTCCTTTTT+GGG | - | chr7.2:34123534-34123553 | None:intergenic | 45.0% |
| ! | TGGAGCAACATCCTCCTTTT+TGG | - | chr7.2:34123535-34123554 | None:intergenic | 45.0% |
| ! | TTAGCCTTTCTGTGGTCCTT+CGG | - | chr7.2:34125695-34125714 | None:intergenic | 45.0% |
| !! | AACATCCTCCTTTTTGGGCA+CGG | - | chr7.2:34123529-34123548 | None:intergenic | 45.0% |
| !! | ACAAATAAGCGCTGGCATCT+TGG | + | chr7.2:34125906-34125925 | MS.gene069038:intron | 45.0% |
| !! | ATATTCGGTGGCAGTTTTGG+AGG | + | chr7.2:34126838-34126857 | MS.gene069038:CDS | 45.0% |
| AACACCGAAGGACCACAGAA+AGG | + | chr7.2:34125688-34125707 | MS.gene069038:CDS | 50.0% | |
| ATTTAACAGACGGGCCGTTG+GGG | - | chr7.2:34124879-34124898 | None:intergenic | 50.0% | |
| CTCATCAGGCTCAAGAGGAT+TGG | - | chr7.2:34127095-34127114 | None:intergenic | 50.0% | |
| CTGCTTTCCAGTGCACACAA+TGG | + | chr7.2:34125082-34125101 | MS.gene069038:intron | 50.0% | |
| CTTTCCAGTGCACACAATGG+AGG | + | chr7.2:34125085-34125104 | MS.gene069038:intron | 50.0% | |
| GAGTCAGACAAATTACCCCG+TGG | + | chr7.2:34126670-34126689 | MS.gene069038:CDS | 50.0% | |
| GCAAACTCATCAGGCTCAAG+AGG | - | chr7.2:34127100-34127119 | None:intergenic | 50.0% | |
| GGCTGGAACGTTTGCAAAGA+AGG | + | chr7.2:34127033-34127052 | MS.gene069038:CDS | 50.0% | |
| TGGATGGCAAAATGCCCCAA+CGG | + | chr7.2:34124862-34124881 | MS.gene069038:CDS | 50.0% | |
| TGTGCACTGGAAAGCAGTGA+CGG | - | chr7.2:34125079-34125098 | None:intergenic | 50.0% | |
| ! | AGACCAGTGAGGACCCTTTT+GGG | + | chr7.2:34123558-34123577 | MS.gene069038:CDS | 50.0% |
| ! | GGAAAGGCTTAGCCTTTCTG+TGG | - | chr7.2:34125703-34125722 | None:intergenic | 50.0% |
| !!! | GCGCGCGTGCATTTTTTTCT+TGG | + | chr7.2:34125589-34125608 | MS.gene069038:intron | 50.0% |
| ACTCTACGTGTCGCCAAACC+AGG | + | chr7.2:34126882-34126901 | MS.gene069038:CDS | 55.0% | |
| ATGGCCTCGGAGAGAAAGAG+AGG | - | chr7.2:34125037-34125056 | None:intergenic | 55.0% | |
| CATCCCAAAAGGGTCCTCAC+TGG | - | chr7.2:34123564-34123583 | None:intergenic | 55.0% | |
| TTGCTCCAGAGAGACCAGTG+AGG | + | chr7.2:34123547-34123566 | MS.gene069038:CDS | 55.0% | |
| ! | GAGACCAGTGAGGACCCTTT+TGG | + | chr7.2:34123557-34123576 | MS.gene069038:CDS | 55.0% |
| ! | TGGTTTGGCGACACGTAGAG+TGG | - | chr7.2:34126883-34126902 | None:intergenic | 55.0% |
| !! | CAGTGAGGACCCTTTTGGGA+TGG | + | chr7.2:34123562-34123581 | MS.gene069038:CDS | 55.0% |
| !!! | GAGGACCCTTTTGGGATGGA+AGG | + | chr7.2:34123566-34123585 | MS.gene069038:CDS | 55.0% |
| ACCGCCTCTCTTTCTCTCCG+AGG | + | chr7.2:34125030-34125049 | MS.gene069038:intron | 60.0% | |
| AGCTGAGGCCGTGCCCAAAA+AGG | + | chr7.2:34123518-34123537 | MS.gene069038:CDS | 60.0% | |
| GCCTCGGAGAGAAAGAGAGG+CGG | - | chr7.2:34125034-34125053 | None:intergenic | 60.0% | |
| TGAGGCCGTGCCCAAAAAGG+AGG | + | chr7.2:34123521-34123540 | MS.gene069038:CDS | 60.0% | |
| ! | AGGGTCCTCACTGGTCTCTC+TGG | - | chr7.2:34123555-34123574 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 34123486 | 34127138 | 34123486 | ID=MS.gene069038 |
| chr7.2 | mRNA | 34123486 | 34127138 | 34123486 | ID=MS.gene069038.t1;Parent=MS.gene069038 |
| chr7.2 | exon | 34123486 | 34123697 | 34123486 | ID=MS.gene069038.t1.exon1;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34123486 | 34123697 | 34123486 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| chr7.2 | exon | 34124188 | 34124329 | 34124188 | ID=MS.gene069038.t1.exon2;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34124188 | 34124329 | 34124188 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| chr7.2 | exon | 34124835 | 34124913 | 34124835 | ID=MS.gene069038.t1.exon3;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34124835 | 34124913 | 34124835 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| chr7.2 | exon | 34125093 | 34125217 | 34125093 | ID=MS.gene069038.t1.exon4;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34125093 | 34125217 | 34125093 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| chr7.2 | exon | 34125680 | 34125781 | 34125680 | ID=MS.gene069038.t1.exon5;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34125680 | 34125781 | 34125680 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| chr7.2 | exon | 34126652 | 34126720 | 34126652 | ID=MS.gene069038.t1.exon6;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34126652 | 34126720 | 34126652 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| chr7.2 | exon | 34126805 | 34126903 | 34126805 | ID=MS.gene069038.t1.exon7;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34126805 | 34126903 | 34126805 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| chr7.2 | exon | 34127007 | 34127138 | 34127007 | ID=MS.gene069038.t1.exon8;Parent=MS.gene069038.t1 |
| chr7.2 | CDS | 34127007 | 34127138 | 34127007 | ID=cds.MS.gene069038.t1;Parent=MS.gene069038.t1 |
| Gene Sequence |
| Protein sequence |
