Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23016.t1 | XP_013450336.1 | 96.4 | 384 | 13 | 1 | 1 | 383 | 1 | 384 | 3.70E-217 | 763.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23016.t1 | Q9FVQ0 | 47.1 | 382 | 201 | 1 | 3 | 383 | 2 | 383 | 6.6e-106 | 385.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23016.t1 | A0A072U3T1 | 96.4 | 384 | 13 | 1 | 1 | 383 | 1 | 384 | 2.7e-217 | 763.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene23016 | 0.804073 | 2.57E-49 | -1.69E-46 |
| MS.gene049993 | MS.gene23016 | 0.811047 | 8.51E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene23016 | 0.808618 | 2.83E-50 | -1.69E-46 |
| MS.gene051588 | MS.gene23016 | 0.812216 | 4.74E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene23016 | -0.837153 | 6.15E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene23016 | 0.802454 | 5.57E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene23016 | 0.804057 | 2.59E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene23016 | 0.826467 | 2.67E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene23016 | 0.808842 | 2.54E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene23016 | 0.818556 | 1.84E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene23016 | 0.810406 | 1.17E-50 | -1.69E-46 |
| MS.gene053873 | MS.gene23016 | 0.804629 | 1.97E-49 | -1.69E-46 |
| MS.gene053889 | MS.gene23016 | 0.805006 | 1.64E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene23016 | 0.811484 | 6.84E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene23016 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene23016 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene054102 | MS.gene23016 | 0.825447 | 4.66E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene23016 | 0.890094 | 1.34E-73 | -1.69E-46 |
| MS.gene054349 | MS.gene23016 | 0.850255 | 1.91E-60 | -1.69E-46 |
| MS.gene054556 | MS.gene23016 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene054920 | MS.gene23016 | 0.818153 | 2.27E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene23016 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene23016 | 0.823439 | 1.38E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene23016 | 0.815113 | 1.09E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene23016 | 0.806401 | 8.38E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene23016 | 0.821958 | 3.06E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene23016 | 0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene23016 | 0.809602 | 1.74E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene23016 | -0.822729 | 2.03E-53 | -1.69E-46 |
| MS.gene056514 | MS.gene23016 | 0.840991 | 6.23E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene23016 | 0.839471 | 1.55E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene23016 | 0.840401 | 8.89E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene23016 | 0.845851 | 3.14E-59 | -1.69E-46 |
| MS.gene057476 | MS.gene23016 | 0.81394 | 1.98E-51 | -1.69E-46 |
| MS.gene057610 | MS.gene23016 | 0.810459 | 1.14E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene23016 | 0.822643 | 2.12E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene23016 | 0.814292 | 1.66E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene23016 | 0.837971 | 3.79E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene23016 | 0.801316 | 9.53E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene23016 | 0.824359 | 8.43E-54 | -1.69E-46 |
| MS.gene05872 | MS.gene23016 | 0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene23016 | 0.812569 | 3.97E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene23016 | 0.814124 | 1.81E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene23016 | 0.827915 | 1.20E-54 | -1.69E-46 |
| MS.gene059043 | MS.gene23016 | -0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene059082 | MS.gene23016 | 0.800359 | 1.50E-48 | -1.69E-46 |
| MS.gene059285 | MS.gene23016 | 0.822574 | 2.20E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene23016 | 0.865402 | 6.06E-65 | -1.69E-46 |
| MS.gene059462 | MS.gene23016 | 0.822315 | 2.53E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene23016 | 0.828428 | 9.04E-55 | -1.69E-46 |
| MS.gene059868 | MS.gene23016 | 0.825708 | 4.05E-54 | -1.69E-46 |
| MS.gene059876 | MS.gene23016 | 0.865034 | 7.91E-65 | -1.69E-46 |
| MS.gene060247 | MS.gene23016 | 0.833981 | 3.90E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23016.t1 | MTR_7g107710 | 96.354 | 384 | 13 | 1 | 1 | 383 | 1 | 384 | 0.0 | 764 |
| MS.gene23016.t1 | MTR_7g107690 | 69.377 | 369 | 112 | 1 | 6 | 373 | 8 | 376 | 0.0 | 540 |
| MS.gene23016.t1 | MTR_3g088925 | 49.602 | 377 | 187 | 3 | 3 | 377 | 4 | 379 | 1.14e-133 | 388 |
| MS.gene23016.t1 | MTR_3g088945 | 49.602 | 377 | 187 | 3 | 3 | 377 | 4 | 379 | 2.20e-133 | 387 |
| MS.gene23016.t1 | MTR_3g088955 | 49.072 | 377 | 189 | 3 | 3 | 377 | 4 | 379 | 6.13e-132 | 384 |
| MS.gene23016.t1 | MTR_8g432640 | 47.382 | 382 | 200 | 1 | 1 | 381 | 1 | 382 | 4.49e-131 | 381 |
| MS.gene23016.t1 | MTR_5g033260 | 48.031 | 381 | 197 | 1 | 1 | 380 | 1 | 381 | 2.42e-129 | 377 |
| MS.gene23016.t1 | MTR_4g051642 | 47.606 | 376 | 195 | 2 | 3 | 377 | 4 | 378 | 1.80e-126 | 370 |
| MS.gene23016.t1 | MTR_7g099330 | 45.953 | 383 | 194 | 5 | 7 | 383 | 25 | 400 | 7.20e-120 | 353 |
| MS.gene23016.t1 | MTR_1g069275 | 45.789 | 380 | 197 | 4 | 7 | 380 | 26 | 402 | 8.20e-119 | 351 |
| MS.gene23016.t1 | MTR_1g046230 | 47.326 | 374 | 189 | 4 | 7 | 373 | 25 | 397 | 2.04e-118 | 350 |
| MS.gene23016.t1 | MTR_3g109520 | 45.550 | 382 | 201 | 3 | 7 | 382 | 40 | 420 | 3.67e-118 | 350 |
| MS.gene23016.t1 | MTR_6g086870 | 45.623 | 377 | 195 | 5 | 7 | 374 | 21 | 396 | 2.65e-115 | 342 |
| MS.gene23016.t1 | MTR_1g008380 | 46.257 | 374 | 193 | 4 | 7 | 374 | 43 | 414 | 2.42e-114 | 340 |
| MS.gene23016.t1 | MTR_1g011630 | 44.086 | 372 | 198 | 5 | 7 | 373 | 17 | 383 | 7.62e-114 | 338 |
| MS.gene23016.t1 | MTR_7g099160 | 41.905 | 315 | 170 | 5 | 75 | 383 | 214 | 521 | 1.44e-79 | 254 |
| MS.gene23016.t1 | MTR_3g096030 | 40.659 | 182 | 84 | 1 | 1 | 182 | 1 | 158 | 2.21e-43 | 148 |
| MS.gene23016.t1 | MTR_2g450310 | 24.403 | 377 | 218 | 14 | 3 | 316 | 2 | 374 | 1.36e-17 | 84.7 |
| MS.gene23016.t1 | MTR_3g437580 | 25.641 | 234 | 135 | 5 | 6 | 203 | 13 | 243 | 1.06e-16 | 80.9 |
| MS.gene23016.t1 | MTR_3g437580 | 25.641 | 234 | 135 | 5 | 6 | 203 | 13 | 243 | 1.90e-16 | 80.9 |
| MS.gene23016.t1 | MTR_2g450510 | 25.397 | 378 | 213 | 14 | 3 | 316 | 2 | 374 | 7.39e-16 | 79.3 |
| MS.gene23016.t1 | MTR_8g037880 | 24.199 | 281 | 172 | 7 | 6 | 250 | 4 | 279 | 2.12e-15 | 77.8 |
| MS.gene23016.t1 | MTR_8g037910 | 22.857 | 280 | 176 | 5 | 6 | 250 | 4 | 278 | 2.77e-15 | 76.3 |
| MS.gene23016.t1 | MTR_8g037910 | 24.883 | 213 | 128 | 4 | 6 | 191 | 4 | 211 | 4.02e-15 | 75.1 |
| MS.gene23016.t1 | MTR_8g037910 | 22.857 | 280 | 176 | 5 | 6 | 250 | 4 | 278 | 8.48e-15 | 75.9 |
| MS.gene23016.t1 | MTR_1g041605 | 75.000 | 40 | 10 | 0 | 110 | 149 | 29 | 68 | 5.30e-14 | 67.0 |
| MS.gene23016.t1 | MTR_2g044140 | 26.136 | 264 | 149 | 10 | 8 | 231 | 16 | 273 | 7.92e-12 | 67.0 |
| MS.gene23016.t1 | MTR_2g020630 | 24.715 | 263 | 154 | 9 | 8 | 231 | 16 | 273 | 1.78e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23016.t1 | AT1G48910 | 47.120 | 382 | 201 | 1 | 3 | 383 | 2 | 383 | 4.75e-134 | 389 |
| MS.gene23016.t1 | AT1G21430 | 48.800 | 375 | 186 | 4 | 6 | 377 | 9 | 380 | 3.90e-124 | 363 |
| MS.gene23016.t1 | AT5G43890 | 45.722 | 374 | 195 | 4 | 7 | 373 | 26 | 398 | 2.31e-118 | 350 |
| MS.gene23016.t1 | AT1G04610 | 46.933 | 375 | 190 | 4 | 7 | 373 | 38 | 411 | 6.01e-118 | 350 |
| MS.gene23016.t1 | AT4G13260 | 45.067 | 375 | 199 | 4 | 7 | 375 | 29 | 402 | 2.35e-116 | 345 |
| MS.gene23016.t1 | AT1G04180 | 46.113 | 373 | 192 | 4 | 7 | 373 | 26 | 395 | 4.69e-116 | 344 |
| MS.gene23016.t1 | AT4G28720 | 44.533 | 375 | 199 | 5 | 7 | 373 | 26 | 399 | 8.13e-116 | 343 |
| MS.gene23016.t1 | AT5G25620 | 45.312 | 384 | 199 | 6 | 7 | 382 | 33 | 413 | 1.77e-114 | 340 |
| MS.gene23016.t1 | AT5G25620 | 45.312 | 384 | 199 | 6 | 7 | 382 | 33 | 413 | 2.72e-114 | 340 |
| MS.gene23016.t1 | AT5G11320 | 43.280 | 372 | 199 | 4 | 7 | 373 | 18 | 382 | 2.38e-106 | 319 |
| MS.gene23016.t1 | AT2G33230 | 45.600 | 375 | 194 | 5 | 7 | 373 | 33 | 405 | 4.69e-106 | 319 |
| MS.gene23016.t1 | AT4G32540 | 42.359 | 373 | 203 | 4 | 7 | 373 | 22 | 388 | 3.90e-105 | 316 |
| MS.gene23016.t1 | AT4G32540 | 42.781 | 374 | 202 | 4 | 7 | 373 | 22 | 390 | 4.28e-105 | 316 |
| MS.gene23016.t1 | AT4G13260 | 46.809 | 282 | 145 | 2 | 7 | 283 | 29 | 310 | 6.26e-91 | 276 |
| MS.gene23016.t1 | AT5G11320 | 43.653 | 323 | 170 | 4 | 7 | 324 | 18 | 333 | 1.03e-90 | 277 |
| MS.gene23016.t1 | AT4G13260 | 40.000 | 305 | 169 | 5 | 89 | 380 | 8 | 311 | 1.76e-74 | 234 |
| MS.gene23016.t1 | AT1G62560 | 24.113 | 282 | 176 | 6 | 6 | 250 | 13 | 293 | 3.52e-17 | 82.8 |
| MS.gene23016.t1 | AT1G62560 | 24.113 | 282 | 176 | 6 | 6 | 250 | 13 | 293 | 4.56e-17 | 82.8 |
| MS.gene23016.t1 | AT1G12160 | 24.419 | 344 | 155 | 10 | 6 | 316 | 12 | 283 | 1.14e-16 | 81.6 |
| MS.gene23016.t1 | AT5G07800 | 24.667 | 300 | 160 | 7 | 6 | 250 | 16 | 304 | 2.23e-16 | 80.9 |
| MS.gene23016.t1 | AT1G65860 | 25.778 | 225 | 139 | 3 | 6 | 203 | 13 | 236 | 6.55e-16 | 79.3 |
| MS.gene23016.t1 | AT1G12140 | 25.238 | 210 | 128 | 3 | 22 | 203 | 29 | 237 | 3.81e-15 | 77.0 |
| MS.gene23016.t1 | AT1G12140 | 25.238 | 210 | 128 | 3 | 22 | 203 | 29 | 237 | 3.81e-15 | 77.0 |
| MS.gene23016.t1 | AT5G61290 | 26.840 | 231 | 135 | 5 | 6 | 203 | 16 | 245 | 4.72e-15 | 76.6 |
| MS.gene23016.t1 | AT5G45180 | 24.507 | 355 | 207 | 15 | 1 | 315 | 7 | 340 | 1.22e-14 | 75.5 |
| MS.gene23016.t1 | AT1G62620 | 22.078 | 231 | 144 | 4 | 6 | 203 | 13 | 240 | 9.58e-14 | 72.4 |
| MS.gene23016.t1 | AT1G62620 | 22.078 | 231 | 144 | 4 | 6 | 203 | 13 | 240 | 1.69e-13 | 72.0 |
| MS.gene23016.t1 | AT1G62540 | 26.222 | 225 | 138 | 3 | 6 | 203 | 13 | 236 | 2.64e-13 | 71.6 |
| MS.gene23016.t1 | AT1G62540 | 26.222 | 225 | 138 | 3 | 6 | 203 | 13 | 236 | 3.01e-13 | 71.2 |
| MS.gene23016.t1 | AT1G62540 | 25.152 | 330 | 201 | 6 | 6 | 299 | 13 | 332 | 3.14e-13 | 71.2 |
| MS.gene23016.t1 | AT1G63370 | 21.491 | 228 | 149 | 3 | 6 | 203 | 13 | 240 | 1.13e-12 | 68.9 |
| MS.gene23016.t1 | AT1G12140 | 24.762 | 210 | 127 | 4 | 22 | 203 | 29 | 235 | 1.57e-12 | 68.9 |
| MS.gene23016.t1 | AT1G63370 | 21.491 | 228 | 149 | 3 | 6 | 203 | 13 | 240 | 1.85e-12 | 68.9 |
| MS.gene23016.t1 | AT1G62570 | 23.445 | 209 | 132 | 3 | 22 | 203 | 29 | 236 | 2.69e-12 | 68.6 |
| MS.gene23016.t1 | AT1G12200 | 26.961 | 204 | 113 | 6 | 43 | 232 | 71 | 252 | 4.43e-12 | 67.4 |
| MS.gene23016.t1 | AT1G12200 | 26.857 | 175 | 111 | 4 | 43 | 203 | 71 | 242 | 7.04e-12 | 67.0 |
| MS.gene23016.t1 | AT1G12130 | 25.328 | 229 | 144 | 7 | 43 | 250 | 70 | 292 | 1.22e-11 | 66.2 |
Find 88 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGGGATATGATGTATTA+TGG | 0.157138 | 7.2:+6836270 | MS.gene23016:CDS |
| GTTGTTGGTTCTGGTAATTC+TGG | 0.206192 | 7.2:+6835019 | MS.gene23016:CDS |
| AAACAGTTCATAGAATATTT+AGG | 0.244234 | 7.2:+6834722 | MS.gene23016:CDS |
| CATGTTCTTGTTGTTGGTTC+TGG | 0.258207 | 7.2:+6835010 | MS.gene23016:CDS |
| ACAGTTCCCACGTCAATTAT+AGG | 0.258397 | 7.2:-6836441 | None:intergenic |
| TCAAGAGATCAACTCATAAA+TGG | 0.262238 | 7.2:+6836911 | MS.gene23016:CDS |
| GGTGAAGTTGAGGAGTATTC+TGG | 0.306966 | 7.2:+6834857 | MS.gene23016:CDS |
| TCAACAGCTCTGTTGTATAT+AGG | 0.326418 | 7.2:-6834773 | None:intergenic |
| GGAGTATTCTGGAAGATTCT+TGG | 0.331314 | 7.2:+6834868 | MS.gene23016:CDS |
| TATGGAGATTGCTTTAGATT+TGG | 0.339070 | 7.2:+6835042 | MS.gene23016:CDS |
| CTAGGGATATGATGTATTAT+GGG | 0.347419 | 7.2:+6836271 | MS.gene23016:CDS |
| CTTGCCATACTTCATCTTCA+TGG | 0.350512 | 7.2:-6836415 | None:intergenic |
| TCCTCAACATGAAAGAAATT+AGG | 0.355183 | 7.2:+6838328 | MS.gene23016:CDS |
| GATGAGCATGTTCTTGTTGT+TGG | 0.358206 | 7.2:+6835004 | MS.gene23016:CDS |
| CAACAGCTCTGTTGTATATA+GGG | 0.358349 | 7.2:-6834772 | None:intergenic |
| GCTTTAGATTTGGCTAACTT+TGG | 0.396250 | 7.2:+6835052 | MS.gene23016:CDS |
| ACTGTCAAGAAAATCAAATC+TGG | 0.404277 | 7.2:+6836459 | MS.gene23016:CDS |
| GAAACCAGTGCAGAAAATAA+TGG | 0.408371 | 7.2:-6836890 | None:intergenic |
| CAGAAAATAATGGAGTCAAA+TGG | 0.413696 | 7.2:-6836880 | None:intergenic |
| TTCACCATGAAGATGAAGTA+TGG | 0.415407 | 7.2:+6836411 | MS.gene23016:CDS |
| ATCAACTCATAAATGGCTTA+AGG | 0.422879 | 7.2:+6836918 | MS.gene23016:CDS |
| AAAGCTGAGAATAAGAGTTC+TGG | 0.427642 | 7.2:+6834836 | MS.gene23016:CDS |
| AATCAAATCTGGAGAAATAC+AGG | 0.435570 | 7.2:+6836470 | MS.gene23016:CDS |
| TATGGAGATCTGAGCAAATA+TGG | 0.453306 | 7.2:+6836363 | MS.gene23016:CDS |
| TCCTAATTTCTTTCATGTTG+AGG | 0.454948 | 7.2:-6838329 | None:intergenic |
| ACTTCATCTTCATGGTGAAC+GGG | 0.456709 | 7.2:-6836407 | None:intergenic |
| GAAGCACCGGTGATAATAAT+CGG | 0.458478 | 7.2:+6834500 | MS.gene23016:CDS |
| TGAGGATAAGAAGGTGGAAA+AGG | 0.459298 | 7.2:-6834686 | None:intergenic |
| AGAAAATAATGGAGTCAAAT+GGG | 0.459670 | 7.2:-6836879 | None:intergenic |
| TGGTATGGTAAACCAGGCTT+TGG | 0.460923 | 7.2:-6838200 | None:intergenic |
| ATAATCGGAGCTGGAACATC+CGG | 0.461025 | 7.2:+6834515 | MS.gene23016:CDS |
| GCAAGCTGCTGTGGCTAGGC+CGG | 0.467225 | 7.2:-6834534 | None:intergenic |
| ACTAGTTTCTCCACTGTGCT+TGG | 0.472960 | 7.2:-6836318 | None:intergenic |
| TGGTTCTGGTAATTCTGGTA+TGG | 0.475788 | 7.2:+6835024 | MS.gene23016:CDS |
| ATGTTGATGATGATGAGAAA+TGG | 0.476343 | 7.2:+6834807 | MS.gene23016:CDS |
| CTGCGTTGGGTTGTCAAGGA+GGG | 0.478723 | 7.2:+6838247 | MS.gene23016:CDS |
| CCTCGTGTACCTGAGGTTGA+AGG | 0.480789 | 7.2:+6834917 | MS.gene23016:CDS |
| TTCAATCATTGTTAGAAGCC+CGG | 0.486770 | 7.2:+6835084 | MS.gene23016:CDS |
| TTCTTACCCTTCCAATGGTA+TGG | 0.487301 | 7.2:-6838215 | None:intergenic |
| TAAGAGTTCTGGTGAAGTTG+AGG | 0.487568 | 7.2:+6834847 | MS.gene23016:CDS |
| TTCCATCACGGAACAACACT+TGG | 0.488765 | 7.2:-6836849 | None:intergenic |
| TTCGAGAATGATGAAAGGTA+TGG | 0.490300 | 7.2:-6834570 | None:intergenic |
| TTAAGCAAGCTGCTGTGGCT+AGG | 0.491228 | 7.2:-6834538 | None:intergenic |
| GGGCTTCTAACAATGATTGA+AGG | 0.491991 | 7.2:-6835082 | None:intergenic |
| CTCTCCAACCCTTCAACCTC+AGG | 0.498735 | 7.2:-6834926 | None:intergenic |
| TGCGTTGGGTTGTCAAGGAG+GGG | 0.503567 | 7.2:+6838248 | MS.gene23016:CDS |
| GAAGGGTTGGAGAGTTTCAA+AGG | 0.503574 | 7.2:+6834935 | MS.gene23016:CDS |
| GGTACATAGTGAGGATAAGA+AGG | 0.504694 | 7.2:-6834695 | None:intergenic |
| CTTATGCTCTCTATTTCTGC+TGG | 0.510758 | 7.2:-6836820 | None:intergenic |
| GCAGAAATAGAGAGCATAAG+TGG | 0.510770 | 7.2:+6836823 | MS.gene23016:CDS |
| AGCAAATGATATTGATATGC+TGG | 0.519488 | 7.2:+6838304 | MS.gene23016:CDS |
| TACTTCATCTTCATGGTGAA+CGG | 0.522181 | 7.2:-6836408 | None:intergenic |
| ATAGCAAGCAGGATTGTGTA+TGG | 0.524380 | 7.2:+6836345 | MS.gene23016:CDS |
| AACGGGCCTTCACTAGGAAA+AGG | 0.524492 | 7.2:-6836390 | None:intergenic |
| AGCCTGGTTTACCATACCAT+TGG | 0.525475 | 7.2:+6838204 | MS.gene23016:CDS |
| AGATTCTTGGTTGTTGCTAG+TGG | 0.534441 | 7.2:+6834881 | MS.gene23016:CDS |
| TTTACTGCGTTGGGTTGTCA+AGG | 0.536045 | 7.2:+6838243 | MS.gene23016:CDS |
| AAGGGTTGGAGAGTTTCAAA+GGG | 0.544190 | 7.2:+6834936 | MS.gene23016:CDS |
| ATGGTGAACGGGCCTTCACT+AGG | 0.550940 | 7.2:-6836396 | None:intergenic |
| AACCGTTCTTACCCTTCCAA+TGG | 0.562914 | 7.2:-6838220 | None:intergenic |
| TGGTTTACCATACCATTGGA+AGG | 0.564287 | 7.2:+6838208 | MS.gene23016:CDS |
| AACTAGTGGTGATAGCAAGC+AGG | 0.566788 | 7.2:+6836334 | MS.gene23016:CDS |
| TGTACCTGAGGTTGAAGGGT+TGG | 0.570687 | 7.2:+6834922 | MS.gene23016:CDS |
| TAGGGATATGATGTATTATG+GGG | 0.572152 | 7.2:+6836272 | MS.gene23016:CDS |
| CTCGTGTACCTGAGGTTGAA+GGG | 0.572413 | 7.2:+6834918 | MS.gene23016:CDS |
| CAAGTTTCCTATAATTGACG+TGG | 0.574376 | 7.2:+6836434 | MS.gene23016:CDS |
| TAACAGAATGCATGAAGCAC+CGG | 0.575824 | 7.2:+6834487 | None:intergenic |
| CCGGTGATAATAATCGGAGC+TGG | 0.577061 | 7.2:+6834506 | MS.gene23016:CDS |
| ACTGCGTTGGGTTGTCAAGG+AGG | 0.577065 | 7.2:+6838246 | MS.gene23016:CDS |
| AACCAAGTGTTGTTCCGTGA+TGG | 0.578671 | 7.2:+6836847 | MS.gene23016:CDS |
| CCAGCTCCGATTATTATCAC+CGG | 0.581468 | 7.2:-6834506 | None:intergenic |
| AATAATGGAGTCAAATGGGT+AGG | 0.582608 | 7.2:-6836875 | None:intergenic |
| TTCCAATGGTATGGTAAACC+AGG | 0.588965 | 7.2:-6838206 | None:intergenic |
| GAAGGTGGAAAAGGAAAGTG+TGG | 0.589595 | 7.2:-6834677 | None:intergenic |
| GGAAAGTGATGCATTCAACT+AGG | 0.591806 | 7.2:+6834957 | MS.gene23016:CDS |
| ACATAGTGAGGATAAGAAGG+TGG | 0.610879 | 7.2:-6834692 | None:intergenic |
| AGCTGAACCTCGTGTACCTG+AGG | 0.611922 | 7.2:+6834910 | MS.gene23016:CDS |
| TCTCTTTCGAGAATGATGAA+AGG | 0.630107 | 7.2:-6834575 | None:intergenic |
| GGTTTACCATACCATTGGAA+GGG | 0.632374 | 7.2:+6838209 | MS.gene23016:CDS |
| TTGATGATGATGAGAAATGG+AGG | 0.634704 | 7.2:+6834810 | MS.gene23016:CDS |
| TACCATTGGAAGGGTAAGAA+CGG | 0.636293 | 7.2:+6838218 | MS.gene23016:CDS |
| ATGAAGATGAACACGATCGT+AGG | 0.646942 | 7.2:-6834630 | None:intergenic |
| AGGGATATGATGTATTATGG+GGG | 0.666613 | 7.2:+6836273 | MS.gene23016:CDS |
| AAGTTTCCTATAATTGACGT+GGG | 0.672849 | 7.2:+6836435 | MS.gene23016:CDS |
| CCTTCAACCTCAGGTACACG+AGG | 0.674313 | 7.2:-6834917 | None:intergenic |
| TGATGATGATGAGAAATGGA+GGG | 0.722234 | 7.2:+6834811 | MS.gene23016:CDS |
| CTATCTGTCACCAAGCACAG+TGG | 0.729691 | 7.2:+6836308 | MS.gene23016:CDS |
| AAGCACAGTGGAGAAACTAG+TGG | 0.739420 | 7.2:+6836320 | MS.gene23016:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTATTTTGTATATATGT+AGG | + | chr7.2:6836792-6836811 | MS.gene23016:intron | 10.0% |
| !!! | TTGTAACTTAATTTTTATTT+GGG | + | chr7.2:6835566-6835585 | MS.gene23016:intron | 10.0% |
| !!! | GTTGTAACTTAATTTTTATT+TGG | + | chr7.2:6835565-6835584 | MS.gene23016:intron | 15.0% |
| !!! | TATTTTTCACTTTGTTTTTA+TGG | + | chr7.2:6837632-6837651 | MS.gene23016:intron | 15.0% |
| !!! | TTAAAATTAGTCATCTTTTT+AGG | + | chr7.2:6837212-6837231 | MS.gene23016:intron | 15.0% |
| !!! | TTTTTCCATATATACTTTTT+AGG | - | chr7.2:6837449-6837468 | None:intergenic | 15.0% |
| !! | AAAAAAAGGAAAATGTTAAC+CGG | - | chr7.2:6835748-6835767 | None:intergenic | 20.0% |
| !! | AAACAGTTCATAGAATATTT+AGG | + | chr7.2:6834722-6834741 | MS.gene23016:CDS | 20.0% |
| !! | AACCTGATATATTAAAAAGT+AGG | + | chr7.2:6837004-6837023 | MS.gene23016:intron | 20.0% |
| !! | ATATTTGCTTCTTAAAATCA+CGG | + | chr7.2:6836008-6836027 | MS.gene23016:intron | 20.0% |
| !! | CATTTGTTTATTAACAATAC+AGG | + | chr7.2:6836510-6836529 | MS.gene23016:intron | 20.0% |
| !! | TAATGTTATTAACACTAAAC+AGG | + | chr7.2:6836534-6836553 | MS.gene23016:intron | 20.0% |
| !! | TCAAAATTCAACTATGAAAA+TGG | + | chr7.2:6835275-6835294 | MS.gene23016:intron | 20.0% |
| !!! | AAAAGATGACTAATTTTAAG+TGG | - | chr7.2:6837211-6837230 | None:intergenic | 20.0% |
| !!! | AAAGATGACTAATTTTAAGT+GGG | - | chr7.2:6837210-6837229 | None:intergenic | 20.0% |
| !!! | ACATAGAATTTTGTTAATAC+CGG | - | chr7.2:6835106-6835125 | None:intergenic | 20.0% |
| !!! | ATATTCTATGAACTGTTTTT+TGG | - | chr7.2:6834720-6834739 | None:intergenic | 20.0% |
| !!! | CAACATACAATTATTTTGAT+TGG | - | chr7.2:6837993-6838012 | None:intergenic | 20.0% |
| !!! | GTCATTTCATTTTGATAAAT+TGG | + | chr7.2:6835483-6835502 | MS.gene23016:intron | 20.0% |
| !!! | GTCATTTGAGTTTTTTTTAT+TGG | - | chr7.2:6836153-6836172 | None:intergenic | 20.0% |
| !!! | TAAGTAGATAAATTGCATTT+TGG | - | chr7.2:6836204-6836223 | None:intergenic | 20.0% |
| !!! | TATTCTATGAACTGTTTTTT+GGG | - | chr7.2:6834719-6834738 | None:intergenic | 20.0% |
| !!! | TTTGACCTAAAAAGTATATA+TGG | + | chr7.2:6837441-6837460 | MS.gene23016:intron | 20.0% |
| !!! | TTTGATAGTTGATTTAAGAT+AGG | - | chr7.2:6835319-6835338 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATTGGTCACTTA+GGG | - | chr7.2:6836143-6836162 | None:intergenic | 20.0% |
| ! | AAGATCTAATGCACTTAATT+AGG | - | chr7.2:6835146-6835165 | None:intergenic | 25.0% |
| ! | AATCACAAGACACTTTAATT+TGG | + | chr7.2:6837840-6837859 | MS.gene23016:intron | 25.0% |
| ! | AATTAGGGAGAAAAAGAATA+AGG | - | chr7.2:6835130-6835149 | None:intergenic | 25.0% |
| ! | AGATCTAATGCACTTAATTA+GGG | - | chr7.2:6835145-6835164 | None:intergenic | 25.0% |
| ! | ATATATACTTAATCCTCCAA+AGG | + | chr7.2:6836087-6836106 | MS.gene23016:intron | 25.0% |
| ! | ATTGGTATAACAAACTTAAC+AGG | - | chr7.2:6837472-6837491 | None:intergenic | 25.0% |
| ! | CAATCCAAACATGTTAATTT+GGG | - | chr7.2:6836644-6836663 | None:intergenic | 25.0% |
| ! | CAATGAATTTGACAAAATCA+TGG | - | chr7.2:6837898-6837917 | None:intergenic | 25.0% |
| ! | CTTAAGGGACTAAAATAAAA+CGG | - | chr7.2:6835392-6835411 | None:intergenic | 25.0% |
| ! | GAAACGATTCAAAAACTTAA+AGG | - | chr7.2:6837108-6837127 | None:intergenic | 25.0% |
| ! | GTCAAGTTTACATATATGTA+TGG | - | chr7.2:6836725-6836744 | None:intergenic | 25.0% |
| ! | TATCAAAATGAAATGACACT+AGG | - | chr7.2:6835480-6835499 | None:intergenic | 25.0% |
| ! | TCAATCCAAACATGTTAATT+TGG | - | chr7.2:6836645-6836664 | None:intergenic | 25.0% |
| ! | TCTTTATGTGATAAAGACAT+AGG | + | chr7.2:6836753-6836772 | MS.gene23016:intron | 25.0% |
| ! | TTACTATTTAGCTATACTGA+TGG | + | chr7.2:6837797-6837816 | MS.gene23016:intron | 25.0% |
| ! | TTGTTAAACTTGACTAACAT+TGG | - | chr7.2:6837490-6837509 | None:intergenic | 25.0% |
| !! | AAAAACTTAAAGGACTTGTT+TGG | - | chr7.2:6837098-6837117 | None:intergenic | 25.0% |
| !! | AAAACTGTTTTGCTTCTTTA+TGG | + | chr7.2:6834597-6834616 | MS.gene23016:CDS | 25.0% |
| !! | AAAACTTAAAGGACTTGTTT+GGG | - | chr7.2:6837097-6837116 | None:intergenic | 25.0% |
| !! | AAAGTATCCTTATCATGTAT+TGG | - | chr7.2:6837672-6837691 | None:intergenic | 25.0% |
| !! | AGAAAATAATGGAGTCAAAT+GGG | - | chr7.2:6836882-6836901 | None:intergenic | 25.0% |
| !! | CATAGAATTTTGTTAATACC+GGG | - | chr7.2:6835105-6835124 | None:intergenic | 25.0% |
| !! | CATTAGATCTTTACTAGTTT+AGG | + | chr7.2:6835155-6835174 | MS.gene23016:intron | 25.0% |
| !! | TACTAGTTTAGGCTAAATTA+TGG | + | chr7.2:6835166-6835185 | MS.gene23016:intron | 25.0% |
| !!! | AGTGTTCATTATTTTGAACA+GGG | + | chr7.2:6838149-6838168 | MS.gene23016:intron | 25.0% |
| !!! | ATTTTCCTTTTTTTGCTAGT+TGG | + | chr7.2:6835754-6835773 | MS.gene23016:intron | 25.0% |
| !!! | GAAACTTAAATGACTTGTTT+GGG | + | chr7.2:6837356-6837375 | MS.gene23016:intron | 25.0% |
| !!! | GACCTACTTTTTAATATATC+AGG | - | chr7.2:6837009-6837028 | None:intergenic | 25.0% |
| !!! | GCTTAAGGTATCATATTTTA+TGG | + | chr7.2:6836933-6836952 | MS.gene23016:intron | 25.0% |
| !!! | GTTTTTTTTATTGGTCACTT+AGG | - | chr7.2:6836144-6836163 | None:intergenic | 25.0% |
| !!! | TAGTGTTCATTATTTTGAAC+AGG | + | chr7.2:6838148-6838167 | MS.gene23016:intron | 25.0% |
| !!! | TATTTTAAGCATGTGTTGTT+TGG | - | chr7.2:6836070-6836089 | None:intergenic | 25.0% |
| !!! | TGAAACTTAAATGACTTGTT+TGG | + | chr7.2:6837355-6837374 | MS.gene23016:intron | 25.0% |
| !!! | TTAGATCAGTTATTTTGAGA+CGG | + | chr7.2:6837759-6837778 | MS.gene23016:intron | 25.0% |
| !!! | TTTGATAGTTGATTTGAGAT+AGG | + | chr7.2:6835233-6835252 | MS.gene23016:intron | 25.0% |
| AACTAGGTACAAAAATGGAA+AGG | + | chr7.2:6834973-6834992 | MS.gene23016:CDS | 30.0% | |
| AAGTTTCCTATAATTGACGT+GGG | + | chr7.2:6836435-6836454 | MS.gene23016:CDS | 30.0% | |
| AATCAAATCTGGAGAAATAC+AGG | + | chr7.2:6836470-6836489 | MS.gene23016:CDS | 30.0% | |
| ACTGTCAAGAAAATCAAATC+TGG | + | chr7.2:6836459-6836478 | MS.gene23016:CDS | 30.0% | |
| AGCAAATGATATTGATATGC+TGG | + | chr7.2:6838304-6838323 | MS.gene23016:CDS | 30.0% | |
| ATCAACTCATAAATGGCTTA+AGG | + | chr7.2:6836918-6836937 | MS.gene23016:CDS | 30.0% | |
| ATCTTAGTATGTGTTTGCTT+TGG | + | chr7.2:6835922-6835941 | MS.gene23016:intron | 30.0% | |
| ATGTATTGTTATGCACATGT+AGG | + | chr7.2:6836236-6836255 | MS.gene23016:intron | 30.0% | |
| CAAAACCAACTAGCAAAAAA+AGG | - | chr7.2:6835762-6835781 | None:intergenic | 30.0% | |
| CATTCAACTAGGTACAAAAA+TGG | + | chr7.2:6834968-6834987 | MS.gene23016:CDS | 30.0% | |
| CTAGGGATATGATGTATTAT+GGG | + | chr7.2:6836271-6836290 | MS.gene23016:CDS | 30.0% | |
| GAAACGATTCAAAAACGAAA+AGG | + | chr7.2:6837310-6837329 | MS.gene23016:intron | 30.0% | |
| GAATAGACCAATACATGATA+AGG | + | chr7.2:6837662-6837681 | MS.gene23016:intron | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | + | chr7.2:6837405-6837424 | MS.gene23016:intron | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | - | chr7.2:6837424-6837405 | None:intergenic | 30.0% | |
| TAGGGATATGATGTATTATG+GGG | + | chr7.2:6836272-6836291 | MS.gene23016:CDS | 30.0% | |
| TCAAGAGATCAACTCATAAA+TGG | + | chr7.2:6836911-6836930 | MS.gene23016:CDS | 30.0% | |
| TCTAGGGATATGATGTATTA+TGG | + | chr7.2:6836270-6836289 | MS.gene23016:CDS | 30.0% | |
| TGAATTGAAAGTGATGTAAG+TGG | - | chr7.2:6837611-6837630 | None:intergenic | 30.0% | |
| TGAATTTGACAAAATCATGG+TGG | - | chr7.2:6837895-6837914 | None:intergenic | 30.0% | |
| TTTAGGTCAAATGCATCTAA+AGG | - | chr7.2:6837432-6837451 | None:intergenic | 30.0% | |
| TTTCAAACAAGTCCTATTGT+AGG | + | chr7.2:6837124-6837143 | MS.gene23016:intron | 30.0% | |
| TTTGCCCAAATTAACATGTT+TGG | + | chr7.2:6836637-6836656 | MS.gene23016:intron | 30.0% | |
| ! | AAAAACGAAAAGGACTTGTT+TGG | + | chr7.2:6837320-6837339 | MS.gene23016:intron | 30.0% |
| ! | AAAACGAAAAGGACTTGTTT+GGG | + | chr7.2:6837321-6837340 | MS.gene23016:intron | 30.0% |
| ! | CAGAAAATAATGGAGTCAAA+TGG | - | chr7.2:6836883-6836902 | None:intergenic | 30.0% |
| ! | CTGGTTAAGGTATCTAAAAA+AGG | + | chr7.2:6835615-6835634 | MS.gene23016:intron | 30.0% |
| ! | GAAACTTAAAGGACCATTTT+GGG | + | chr7.2:6837385-6837404 | MS.gene23016:intron | 30.0% |
| ! | GTAGGTTCATTTTCTTTCTA+GGG | + | chr7.2:6836254-6836273 | MS.gene23016:intron | 30.0% |
| ! | TATGGAGATTGCTTTAGATT+TGG | + | chr7.2:6835042-6835061 | MS.gene23016:CDS | 30.0% |
| ! | TGAAACTTAAAGGACCATTT+TGG | + | chr7.2:6837384-6837403 | MS.gene23016:intron | 30.0% |
| ! | TGTAGGTTCATTTTCTTTCT+AGG | + | chr7.2:6836253-6836272 | MS.gene23016:intron | 30.0% |
| ! | TTTCAAACAAGTCCTTTTAG+AGG | - | chr7.2:6837294-6837313 | None:intergenic | 30.0% |
| !! | ACTAATTTTAAGTGGGTGTT+AGG | - | chr7.2:6837203-6837222 | None:intergenic | 30.0% |
| !! | ATGTTGATGATGATGAGAAA+TGG | + | chr7.2:6834807-6834826 | MS.gene23016:CDS | 30.0% |
| !! | ATTAGTCATCTTTTTAGGCA+TGG | + | chr7.2:6837217-6837236 | MS.gene23016:intron | 30.0% |
| !! | ATTTGCAAGTTGAATTTTGG+AGG | - | chr7.2:6836118-6836137 | None:intergenic | 30.0% |
| !! | ATTTTGGTCGTAAGTTACAA+AGG | - | chr7.2:6836188-6836207 | None:intergenic | 30.0% |
| !! | GTGATTTGCAAGTTGAATTT+TGG | - | chr7.2:6836121-6836140 | None:intergenic | 30.0% |
| !! | GTTTTTCGTTTTTCCCAAAA+TGG | - | chr7.2:6837401-6837420 | None:intergenic | 30.0% |
| !! | TATGGAGTACTACTTCTTTT+TGG | + | chr7.2:6836951-6836970 | MS.gene23016:intron | 30.0% |
| !! | TTTATTTGGGTTGTGTTAAC+CGG | + | chr7.2:6835579-6835598 | MS.gene23016:intron | 30.0% |
| !! | TTTGCAAGTTGAATTTTGGA+GGG | - | chr7.2:6836117-6836136 | None:intergenic | 30.0% |
| !!! | CGTTTTATTTTAGTCCCTTA+AGG | + | chr7.2:6835390-6835409 | MS.gene23016:intron | 30.0% |
| !!! | CTTTTTTTGCTAGTTGGTTT+TGG | + | chr7.2:6835760-6835779 | MS.gene23016:intron | 30.0% |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | + | chr7.2:6837374-6837393 | MS.gene23016:intron | 30.0% |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr7.2:6837393-6837374 | None:intergenic | 30.0% |
| AAAGCTGAGAATAAGAGTTC+TGG | + | chr7.2:6834836-6834855 | MS.gene23016:CDS | 35.0% | |
| AATCTGCATGTTGCAAATCA+CGG | - | chr7.2:6835193-6835212 | None:intergenic | 35.0% | |
| AGGGATATGATGTATTATGG+GGG | + | chr7.2:6836273-6836292 | MS.gene23016:CDS | 35.0% | |
| AGTAGGTCAAATGCATCTAA+AGG | + | chr7.2:6837021-6837040 | MS.gene23016:intron | 35.0% | |
| ATGACACTGCATTCAATCAA+GGG | - | chr7.2:6838110-6838129 | None:intergenic | 35.0% | |
| CAACAGCTCTGTTGTATATA+GGG | - | chr7.2:6834775-6834794 | None:intergenic | 35.0% | |
| CAAGTTTCCTATAATTGACG+TGG | + | chr7.2:6836434-6836453 | MS.gene23016:CDS | 35.0% | |
| GAAACCAGTGCAGAAAATAA+TGG | - | chr7.2:6836893-6836912 | None:intergenic | 35.0% | |
| GAAACTTAAAGGACCACTTT+GGG | - | chr7.2:6837068-6837087 | None:intergenic | 35.0% | |
| GCACTTGTGAATACATTAAG+AGG | + | chr7.2:6836686-6836705 | MS.gene23016:intron | 35.0% | |
| GTAAAAACAGTTCCAAAGTG+CGG | + | chr7.2:6836030-6836049 | MS.gene23016:intron | 35.0% | |
| GTTACAAAGGATAGACATGT+TGG | - | chr7.2:6836175-6836194 | None:intergenic | 35.0% | |
| TACTTCATCTTCATGGTGAA+CGG | - | chr7.2:6836411-6836430 | None:intergenic | 35.0% | |
| TAGCTATACTGATGGAATCA+TGG | + | chr7.2:6837805-6837824 | MS.gene23016:intron | 35.0% | |
| TATGGAGATCTGAGCAAATA+TGG | + | chr7.2:6836363-6836382 | MS.gene23016:CDS | 35.0% | |
| TCAACAGCTCTGTTGTATAT+AGG | - | chr7.2:6834776-6834795 | None:intergenic | 35.0% | |
| TCCAAGAGAGATCAGTATTT+AGG | - | chr7.2:6836565-6836584 | None:intergenic | 35.0% | |
| TCTCTTTCGAGAATGATGAA+AGG | - | chr7.2:6834578-6834597 | None:intergenic | 35.0% | |
| TGAAACTTAAAGGACCACTT+TGG | - | chr7.2:6837069-6837088 | None:intergenic | 35.0% | |
| TTCAATCATTGTTAGAAGCC+CGG | + | chr7.2:6835084-6835103 | MS.gene23016:CDS | 35.0% | |
| TTCACCATGAAGATGAAGTA+TGG | + | chr7.2:6836411-6836430 | MS.gene23016:CDS | 35.0% | |
| TTCGAGAATGATGAAAGGTA+TGG | - | chr7.2:6834573-6834592 | None:intergenic | 35.0% | |
| TTTCCGTTCTCTCTCAAAAT+AGG | + | chr7.2:6837525-6837544 | MS.gene23016:intron | 35.0% | |
| ! | AAACATCTGACTTGACAAGA+AGG | + | chr7.2:6835511-6835530 | MS.gene23016:intron | 35.0% |
| ! | AATAATGGAGTCAAATGGGT+AGG | - | chr7.2:6836878-6836897 | None:intergenic | 35.0% |
| ! | GCTTTAGATTTGGCTAACTT+TGG | + | chr7.2:6835052-6835071 | MS.gene23016:CDS | 35.0% |
| ! | TGATGATGATGAGAAATGGA+GGG | + | chr7.2:6834811-6834830 | MS.gene23016:CDS | 35.0% |
| !! | AATTTTGGAGGGAAAACCTT+TGG | - | chr7.2:6836106-6836125 | None:intergenic | 35.0% |
| !! | ACAACACTTTAGCTCTTTGT+CGG | - | chr7.2:6835550-6835569 | None:intergenic | 35.0% |
| !! | ATCTTTTTAGGCATGGCAAA+TGG | + | chr7.2:6837224-6837243 | MS.gene23016:intron | 35.0% |
| !! | GTTTTTCGTTTTTCCCAAAG+TGG | + | chr7.2:6837052-6837071 | MS.gene23016:intron | 35.0% |
| !! | TATTTTGAGAGAGAACGGAA+AGG | - | chr7.2:6837526-6837545 | None:intergenic | 35.0% |
| !! | TCACCTATTTTGAGAGAGAA+CGG | - | chr7.2:6837531-6837550 | None:intergenic | 35.0% |
| !! | TTGATGATGATGAGAAATGG+AGG | + | chr7.2:6834810-6834829 | MS.gene23016:CDS | 35.0% |
| !!! | GTTCATTATTTTGAACAGGG+TGG | + | chr7.2:6838152-6838171 | MS.gene23016:intron | 35.0% |
| !!! | TCAGTTATTTTGAGACGGAA+CGG | + | chr7.2:6837764-6837783 | MS.gene23016:intron | 35.0% |
| !!! | TGTTTTTTGGGTACATAGTG+AGG | - | chr7.2:6834707-6834726 | None:intergenic | 35.0% |
| !!! | TTGGTTTTGGAAGGTTTTAG+AGG | + | chr7.2:6835773-6835792 | MS.gene23016:intron | 35.0% |
| !!! | TTTTGCTAGTTGGTTTTGGA+AGG | + | chr7.2:6835764-6835783 | MS.gene23016:intron | 35.0% |
| AAAGACATAGGATTGACGAG+TGG | + | chr7.2:6836765-6836784 | MS.gene23016:intron | 40.0% | |
| AAGCACATGACATGCATAGA+TGG | + | chr7.2:6836587-6836606 | MS.gene23016:intron | 40.0% | |
| AAGGGTTGGAGAGTTTCAAA+GGG | + | chr7.2:6834936-6834955 | MS.gene23016:CDS | 40.0% | |
| ACAGTTCCCACGTCAATTAT+AGG | - | chr7.2:6836444-6836463 | None:intergenic | 40.0% | |
| ACATAGTGAGGATAAGAAGG+TGG | - | chr7.2:6834695-6834714 | None:intergenic | 40.0% | |
| ACTTCATCTTCATGGTGAAC+GGG | - | chr7.2:6836410-6836429 | None:intergenic | 40.0% | |
| AGATTCTTGGTTGTTGCTAG+TGG | + | chr7.2:6834881-6834900 | MS.gene23016:CDS | 40.0% | |
| ATAGCAAGCAGGATTGTGTA+TGG | + | chr7.2:6836345-6836364 | MS.gene23016:CDS | 40.0% | |
| ATGAAGATGAACACGATCGT+AGG | - | chr7.2:6834633-6834652 | None:intergenic | 40.0% | |
| CATCACCATCATCCTCTAAA+AGG | + | chr7.2:6837279-6837298 | MS.gene23016:intron | 40.0% | |
| CATGACACTGCATTCAATCA+AGG | - | chr7.2:6838111-6838130 | None:intergenic | 40.0% | |
| CATTAAGAGGTTGAGTGATG+CGG | + | chr7.2:6836699-6836718 | MS.gene23016:intron | 40.0% | |
| CCAACTATGCTACCTACAAT+AGG | - | chr7.2:6837139-6837158 | None:intergenic | 40.0% | |
| CCTATTGTAGGTAGCATAGT+TGG | + | chr7.2:6837136-6837155 | MS.gene23016:intron | 40.0% | |
| CTCATCTTTGGTACCAAATC+TGG | + | chr7.2:6837175-6837194 | MS.gene23016:intron | 40.0% | |
| CTTGCCATACTTCATCTTCA+TGG | - | chr7.2:6836418-6836437 | None:intergenic | 40.0% | |
| GCCTAAATACTGATCTCTCT+TGG | + | chr7.2:6836561-6836580 | MS.gene23016:intron | 40.0% | |
| GGAAAGTGATGCATTCAACT+AGG | + | chr7.2:6834957-6834976 | MS.gene23016:CDS | 40.0% | |
| GGGCTTCTAACAATGATTGA+AGG | - | chr7.2:6835085-6835104 | None:intergenic | 40.0% | |
| GGTACATAGTGAGGATAAGA+AGG | - | chr7.2:6834698-6834717 | None:intergenic | 40.0% | |
| GGTTTACCATACCATTGGAA+GGG | + | chr7.2:6838209-6838228 | MS.gene23016:CDS | 40.0% | |
| GTGTGACGATTGTACCTTAA+GGG | - | chr7.2:6835407-6835426 | None:intergenic | 40.0% | |
| TACCATTGGAAGGGTAAGAA+CGG | + | chr7.2:6838218-6838237 | MS.gene23016:CDS | 40.0% | |
| TATGTGTTTGCTTTGGCAGT+GGG | + | chr7.2:6835929-6835948 | MS.gene23016:intron | 40.0% | |
| TGAGGATAAGAAGGTGGAAA+AGG | - | chr7.2:6834689-6834708 | None:intergenic | 40.0% | |
| TGCTTCCTTGAACTCATCTT+TGG | + | chr7.2:6837163-6837182 | MS.gene23016:intron | 40.0% | |
| TGGTACCAAAGATGAGTTCA+AGG | - | chr7.2:6837171-6837190 | None:intergenic | 40.0% | |
| TGGTTTACCATACCATTGGA+AGG | + | chr7.2:6838208-6838227 | MS.gene23016:CDS | 40.0% | |
| TGTGTGACGATTGTACCTTA+AGG | - | chr7.2:6835408-6835427 | None:intergenic | 40.0% | |
| TTCCAATGGTATGGTAAACC+AGG | - | chr7.2:6838209-6838228 | None:intergenic | 40.0% | |
| TTCTTACCCTTCCAATGGTA+TGG | - | chr7.2:6838218-6838237 | None:intergenic | 40.0% | |
| ! | AAGAACGGTTTTTACTGCGT+TGG | + | chr7.2:6838233-6838252 | MS.gene23016:CDS | 40.0% |
| ! | AGAACGGTTTTTACTGCGTT+GGG | + | chr7.2:6838234-6838253 | MS.gene23016:CDS | 40.0% |
| ! | ATGGGTAGGATTTTCCATCA+CGG | - | chr7.2:6836864-6836883 | None:intergenic | 40.0% |
| ! | GACTCCATTATTTTCTGCAC+TGG | + | chr7.2:6836886-6836905 | MS.gene23016:CDS | 40.0% |
| ! | GATGAGCATGTTCTTGTTGT+TGG | + | chr7.2:6835004-6835023 | MS.gene23016:CDS | 40.0% |
| ! | GCAGAAATAGAGAGCATAAG+TGG | + | chr7.2:6836823-6836842 | MS.gene23016:CDS | 40.0% |
| ! | GGAGTATTCTGGAAGATTCT+TGG | + | chr7.2:6834868-6834887 | MS.gene23016:CDS | 40.0% |
| ! | GGTATACCTTTTCCTAGTGA+AGG | + | chr7.2:6836384-6836403 | MS.gene23016:CDS | 40.0% |
| ! | GGTGATCTTTTGAATGAGGA+TGG | + | chr7.2:6838173-6838192 | MS.gene23016:CDS | 40.0% |
| ! | TAAGAGTTCTGGTGAAGTTG+AGG | + | chr7.2:6834847-6834866 | MS.gene23016:CDS | 40.0% |
| ! | TTGTCAAGGAGGGGATTTTA+TGG | + | chr7.2:6838257-6838276 | MS.gene23016:CDS | 40.0% |
| ! | TTTTGTTAAGCAAGCTGCTG+TGG | - | chr7.2:6834546-6834565 | None:intergenic | 40.0% |
| !! | CAAGTCCTTTTAGAGGATGA+TGG | - | chr7.2:6837287-6837306 | None:intergenic | 40.0% |
| !! | CATGTTCTTGTTGTTGGTTC+TGG | + | chr7.2:6835010-6835029 | MS.gene23016:CDS | 40.0% |
| !! | CTTATGCTCTCTATTTCTGC+TGG | - | chr7.2:6836823-6836842 | None:intergenic | 40.0% |
| !! | GAAGCACCGGTGATAATAAT+CGG | + | chr7.2:6834500-6834519 | MS.gene23016:CDS | 40.0% |
| !! | GTTGTTGGTTCTGGTAATTC+TGG | + | chr7.2:6835019-6835038 | MS.gene23016:CDS | 40.0% |
| !! | TGGTTCTGGTAATTCTGGTA+TGG | + | chr7.2:6835024-6835043 | MS.gene23016:CDS | 40.0% |
| !! | TTTTTAGGCATGGCAAATGG+AGG | + | chr7.2:6837227-6837246 | MS.gene23016:intron | 40.0% |
| AACCGTTCTTACCCTTCCAA+TGG | - | chr7.2:6838223-6838242 | None:intergenic | 45.0% | |
| AACTAGTGGTGATAGCAAGC+AGG | + | chr7.2:6836334-6836353 | MS.gene23016:CDS | 45.0% | |
| AAGCACAGTGGAGAAACTAG+TGG | + | chr7.2:6836320-6836339 | MS.gene23016:CDS | 45.0% | |
| AGCCTGGTTTACCATACCAT+TGG | + | chr7.2:6838204-6838223 | MS.gene23016:CDS | 45.0% | |
| ATAATCGGAGCTGGAACATC+CGG | + | chr7.2:6834515-6834534 | MS.gene23016:CDS | 45.0% | |
| CCAGCTCCGATTATTATCAC+CGG | - | chr7.2:6834509-6834528 | None:intergenic | 45.0% | |
| GAAGGGTTGGAGAGTTTCAA+AGG | + | chr7.2:6834935-6834954 | MS.gene23016:CDS | 45.0% | |
| GAAGGTGGAAAAGGAAAGTG+TGG | - | chr7.2:6834680-6834699 | None:intergenic | 45.0% | |
| GTATGTGTTTGCTTTGGCAG+TGG | + | chr7.2:6835928-6835947 | MS.gene23016:intron | 45.0% | |
| TGGTATGGTAAACCAGGCTT+TGG | - | chr7.2:6838203-6838222 | None:intergenic | 45.0% | |
| TTCCATCACGGAACAACACT+TGG | - | chr7.2:6836852-6836871 | None:intergenic | 45.0% | |
| TTTGGAGGGAAAACCTTTGG+AGG | - | chr7.2:6836103-6836122 | None:intergenic | 45.0% | |
| ! | AACCAAGTGTTGTTCCGTGA+TGG | + | chr7.2:6836847-6836866 | MS.gene23016:CDS | 45.0% |
| ! | ACTAGTTTCTCCACTGTGCT+TGG | - | chr7.2:6836321-6836340 | None:intergenic | 45.0% |
| ! | CAGCTTTAATAGCCGCACTT+TGG | - | chr7.2:6836045-6836064 | None:intergenic | 45.0% |
| ! | CATCTGACTTGACAAGAAGG+AGG | + | chr7.2:6835514-6835533 | MS.gene23016:intron | 45.0% |
| ! | GGGTGGTGATCTTTTGAATG+AGG | + | chr7.2:6838169-6838188 | MS.gene23016:intron | 45.0% |
| ! | TTTACTGCGTTGGGTTGTCA+AGG | + | chr7.2:6838243-6838262 | MS.gene23016:CDS | 45.0% |
| !! | GCGGATTGTTACTGCGATTT+TGG | - | chr7.2:6835969-6835988 | None:intergenic | 45.0% |
| !! | GGTGAAGTTGAGGAGTATTC+TGG | + | chr7.2:6834857-6834876 | MS.gene23016:CDS | 45.0% |
| !! | TCTTAGCTTTGCTGCAAACG+CGG | - | chr7.2:6835988-6836007 | None:intergenic | 45.0% |
| !! | TTGCTACATTTTGAGCGTCG+AGG | - | chr7.2:6838289-6838308 | None:intergenic | 45.0% |
| AAAATGTTAACCGGTGCCCC+CGG | - | chr7.2:6835739-6835758 | None:intergenic | 50.0% | |
| AACGGGCCTTCACTAGGAAA+AGG | - | chr7.2:6836393-6836412 | None:intergenic | 50.0% | |
| AGACACGCAGATTCACGCTA+CGG | - | chr7.2:6835349-6835368 | None:intergenic | 50.0% | |
| AGATACCTTAACCAGTGCCC+CGG | - | chr7.2:6835610-6835629 | None:intergenic | 50.0% | |
| CCGGTGATAATAATCGGAGC+TGG | + | chr7.2:6834506-6834525 | MS.gene23016:CDS | 50.0% | |
| CTATCTGTCACCAAGCACAG+TGG | + | chr7.2:6836308-6836327 | MS.gene23016:CDS | 50.0% | |
| CTCGTGTACCTGAGGTTGAA+GGG | + | chr7.2:6834918-6834937 | MS.gene23016:CDS | 50.0% | |
| TGGGTGTTAGGAGCCAGATT+TGG | - | chr7.2:6837191-6837210 | None:intergenic | 50.0% | |
| TGTACCTGAGGTTGAAGGGT+TGG | + | chr7.2:6834922-6834941 | MS.gene23016:CDS | 50.0% | |
| TGTTTCCTTAACCAGTGCCC+CGG | + | chr7.2:6835717-6835736 | MS.gene23016:intron | 50.0% | |
| TTAAGCAAGCTGCTGTGGCT+AGG | - | chr7.2:6834541-6834560 | None:intergenic | 50.0% | |
| ! | GAGGATGGTTTTCCAAAGCC+TGG | + | chr7.2:6838188-6838207 | MS.gene23016:CDS | 50.0% |
| !!! | ACTGCGATTTTGGCTGAACG+TGG | - | chr7.2:6835959-6835978 | None:intergenic | 50.0% |
| AAATGTTAACCGGTGCCCCC+GGG | - | chr7.2:6835738-6835757 | None:intergenic | 55.0% | |
| AGCTGAACCTCGTGTACCTG+AGG | + | chr7.2:6834910-6834929 | MS.gene23016:CDS | 55.0% | |
| ATACCTTAACCAGTGCCCCG+GGG | - | chr7.2:6835608-6835627 | None:intergenic | 55.0% | |
| ATGGTGAACGGGCCTTCACT+AGG | - | chr7.2:6836399-6836418 | None:intergenic | 55.0% | |
| CCTCGTGTACCTGAGGTTGA+AGG | + | chr7.2:6834917-6834936 | MS.gene23016:CDS | 55.0% | |
| CCTTCAACCTCAGGTACACG+AGG | - | chr7.2:6834920-6834939 | None:intergenic | 55.0% | |
| CTCTCCAACCCTTCAACCTC+AGG | - | chr7.2:6834929-6834948 | None:intergenic | 55.0% | |
| GATACCTTAACCAGTGCCCC+GGG | - | chr7.2:6835609-6835628 | None:intergenic | 55.0% | |
| GTTTCCTTAACCAGTGCCCC+GGG | + | chr7.2:6835718-6835737 | MS.gene23016:intron | 55.0% | |
| TTTCCTTAACCAGTGCCCCG+GGG | + | chr7.2:6835719-6835738 | MS.gene23016:intron | 55.0% | |
| ! | ACTGCGTTGGGTTGTCAAGG+AGG | + | chr7.2:6838246-6838265 | MS.gene23016:CDS | 55.0% |
| ! | CTGCGTTGGGTTGTCAAGGA+GGG | + | chr7.2:6838247-6838266 | MS.gene23016:CDS | 55.0% |
| ! | TGCGTTGGGTTGTCAAGGAG+GGG | + | chr7.2:6838248-6838267 | MS.gene23016:CDS | 55.0% |
| AATGTTAACCGGTGCCCCCG+GGG | - | chr7.2:6835737-6835756 | None:intergenic | 60.0% | |
| GTTGTGTTAACCGGTGCCCC+CGG | + | chr7.2:6835588-6835607 | MS.gene23016:intron | 60.0% | |
| TACCTTAACCAGTGCCCCGG+GGG | - | chr7.2:6835607-6835626 | None:intergenic | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | + | chr7.2:6835720-6835739 | MS.gene23016:intron | 60.0% | |
| TTGTGTTAACCGGTGCCCCC+GGG | + | chr7.2:6835589-6835608 | MS.gene23016:intron | 60.0% | |
| GCAAGCTGCTGTGGCTAGGC+CGG | - | chr7.2:6834537-6834556 | None:intergenic | 65.0% | |
| TGTGTTAACCGGTGCCCCCG+GGG | + | chr7.2:6835590-6835609 | MS.gene23016:intron | 65.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr7.2:6835602-6835621 | MS.gene23016:intron | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr7.2:6835621-6835602 | None:intergenic | 70.0% |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr7.2:6835726-6835745 | MS.gene23016:intron | 75.0% |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | - | chr7.2:6835745-6835726 | None:intergenic | 75.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | + | chr7.2:6835596-6835615 | MS.gene23016:intron | 80.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr7.2:6835615-6835596 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 6834494 | 6838349 | 6834494 | ID=MS.gene23016 |
| chr7.2 | mRNA | 6834494 | 6838349 | 6834494 | ID=MS.gene23016.t1;Parent=MS.gene23016 |
| chr7.2 | exon | 6834494 | 6835105 | 6834494 | ID=MS.gene23016.t1.exon1;Parent=MS.gene23016.t1 |
| chr7.2 | CDS | 6834494 | 6835105 | 6834494 | ID=cds.MS.gene23016.t1;Parent=MS.gene23016.t1 |
| chr7.2 | exon | 6836258 | 6836491 | 6836258 | ID=MS.gene23016.t1.exon2;Parent=MS.gene23016.t1 |
| chr7.2 | CDS | 6836258 | 6836491 | 6836258 | ID=cds.MS.gene23016.t1;Parent=MS.gene23016.t1 |
| chr7.2 | exon | 6836814 | 6836939 | 6836814 | ID=MS.gene23016.t1.exon3;Parent=MS.gene23016.t1 |
| chr7.2 | CDS | 6836814 | 6836939 | 6836814 | ID=cds.MS.gene23016.t1;Parent=MS.gene23016.t1 |
| chr7.2 | exon | 6838170 | 6838349 | 6838170 | ID=MS.gene23016.t1.exon4;Parent=MS.gene23016.t1 |
| chr7.2 | CDS | 6838170 | 6838349 | 6838170 | ID=cds.MS.gene23016.t1;Parent=MS.gene23016.t1 |
| Gene Sequence |
| Protein sequence |
