Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23621.t1 | XP_024629064.1 | 97.9 | 673 | 14 | 0 | 1 | 673 | 1 | 673 | 0.00E+00 | 1340.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23621.t1 | Q9LE59 | 70.9 | 669 | 190 | 3 | 6 | 673 | 9 | 673 | 3.4e-283 | 975.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23621.t1 | A0A1S2YW74 | 89.4 | 667 | 71 | 0 | 5 | 671 | 3 | 669 | 0.0e+00 | 1223.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene23621 | 0.84223 | 2.94E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene23621 | 0.800692 | 1.28E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene23621 | 0.827284 | 1.70E-54 | -1.69E-46 |
| MS.gene049907 | MS.gene23621 | 0.80943 | 1.90E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene23621 | 0.817744 | 2.81E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene23621 | 0.807364 | 5.24E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene23621 | 0.837522 | 4.95E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene23621 | 0.819017 | 1.45E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene23621 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene052287 | MS.gene23621 | 0.84437 | 7.88E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene23621 | 0.80922 | 2.11E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene23621 | 0.810839 | 9.44E-51 | -1.69E-46 |
| MS.gene052777 | MS.gene23621 | -0.808187 | 3.50E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene23621 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene053813 | MS.gene23621 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene23621 | 0.822491 | 2.30E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene23621 | 0.825267 | 5.15E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene23621 | 0.834335 | 3.18E-56 | -1.69E-46 |
| MS.gene054013 | MS.gene23621 | 0.835974 | 1.23E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene23621 | 0.802785 | 4.76E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene23621 | 0.855594 | 5.68E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene23621 | 0.840652 | 7.64E-58 | -1.69E-46 |
| MS.gene055604 | MS.gene23621 | 0.813373 | 2.64E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene23621 | 0.800668 | 1.29E-48 | -1.69E-46 |
| MS.gene056191 | MS.gene23621 | 0.822064 | 2.89E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene23621 | 0.871737 | 5.44E-67 | -1.69E-46 |
| MS.gene056611 | MS.gene23621 | 0.814976 | 1.17E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene23621 | 0.826301 | 2.92E-54 | -1.69E-46 |
| MS.gene056931 | MS.gene23621 | 0.840404 | 8.88E-58 | -1.69E-46 |
| MS.gene056933 | MS.gene23621 | 0.841632 | 4.23E-58 | -1.69E-46 |
| MS.gene056935 | MS.gene23621 | 0.832207 | 1.08E-55 | -1.69E-46 |
| MS.gene05806 | MS.gene23621 | 0.835934 | 1.26E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene23621 | 0.855969 | 4.41E-62 | -1.69E-46 |
| MS.gene05842 | MS.gene23621 | 0.803584 | 3.25E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene23621 | 0.817934 | 2.55E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene23621 | 0.835236 | 1.89E-56 | -1.69E-46 |
| MS.gene059294 | MS.gene23621 | 0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene23621 | 0.800324 | 1.52E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene23621 | 0.805418 | 1.35E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene23621 | 0.801238 | 9.90E-49 | -1.69E-46 |
| MS.gene059708 | MS.gene23621 | 0.804943 | 1.69E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene23621 | 0.806093 | 9.73E-50 | -1.69E-46 |
| MS.gene059974 | MS.gene23621 | 0.813298 | 2.75E-51 | -1.69E-46 |
| MS.gene060005 | MS.gene23621 | 0.812802 | 3.53E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene23621 | 0.842209 | 2.97E-58 | -1.69E-46 |
| MS.gene060559 | MS.gene23621 | 0.836121 | 1.13E-56 | -1.69E-46 |
| MS.gene060569 | MS.gene23621 | 0.827094 | 1.89E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene23621 | 0.809577 | 1.77E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene23621 | 0.819752 | 9.85E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23621.t1 | MTR_8g033360 | 97.990 | 597 | 12 | 0 | 41 | 637 | 1 | 597 | 0.0 | 1213 |
| MS.gene23621.t1 | MTR_7g075840 | 80.880 | 659 | 121 | 4 | 16 | 673 | 10 | 664 | 0.0 | 1074 |
| MS.gene23621.t1 | MTR_3g107930 | 57.097 | 620 | 226 | 4 | 79 | 671 | 57 | 663 | 0.0 | 723 |
| MS.gene23621.t1 | MTR_3g107930 | 64.122 | 524 | 188 | 0 | 148 | 671 | 63 | 586 | 0.0 | 721 |
| MS.gene23621.t1 | MTR_2g027740 | 49.480 | 673 | 315 | 9 | 16 | 672 | 3 | 666 | 0.0 | 645 |
| MS.gene23621.t1 | MTR_8g092000 | 57.025 | 484 | 198 | 2 | 193 | 673 | 104 | 580 | 0.0 | 592 |
| MS.gene23621.t1 | MTR_2g015550 | 48.723 | 470 | 228 | 5 | 210 | 672 | 70 | 533 | 1.36e-166 | 488 |
| MS.gene23621.t1 | MTR_7g055600 | 56.934 | 411 | 171 | 4 | 264 | 671 | 25 | 432 | 8.29e-159 | 464 |
| MS.gene23621.t1 | MTR_7g057530 | 56.934 | 411 | 171 | 4 | 264 | 671 | 25 | 432 | 8.29e-159 | 464 |
| MS.gene23621.t1 | MTR_4g109890 | 47.198 | 464 | 229 | 4 | 216 | 671 | 79 | 534 | 6.34e-154 | 456 |
| MS.gene23621.t1 | MTR_2g461670 | 46.253 | 467 | 241 | 4 | 210 | 671 | 128 | 589 | 3.80e-152 | 453 |
| MS.gene23621.t1 | MTR_7g096160 | 45.591 | 465 | 223 | 3 | 211 | 672 | 216 | 653 | 1.27e-148 | 446 |
| MS.gene23621.t1 | MTR_6g016380 | 47.771 | 471 | 226 | 8 | 219 | 671 | 85 | 553 | 4.17e-147 | 439 |
| MS.gene23621.t1 | MTR_2g006790 | 43.949 | 471 | 225 | 7 | 210 | 672 | 70 | 509 | 3.25e-138 | 414 |
| MS.gene23621.t1 | MTR_1g070490 | 42.105 | 475 | 237 | 8 | 204 | 673 | 158 | 599 | 2.21e-125 | 385 |
| MS.gene23621.t1 | MTR_7g012370 | 44.254 | 409 | 201 | 8 | 274 | 660 | 121 | 524 | 5.91e-117 | 361 |
| MS.gene23621.t1 | MTR_2g082650 | 42.289 | 402 | 215 | 5 | 287 | 671 | 9 | 410 | 6.05e-115 | 351 |
| MS.gene23621.t1 | MTR_2g082650 | 41.106 | 416 | 228 | 5 | 273 | 671 | 124 | 539 | 1.32e-113 | 352 |
| MS.gene23621.t1 | MTR_6g013840 | 44.019 | 418 | 215 | 7 | 274 | 673 | 116 | 532 | 7.71e-111 | 345 |
| MS.gene23621.t1 | MTR_4g133570 | 39.753 | 405 | 227 | 4 | 284 | 671 | 58 | 462 | 2.07e-106 | 331 |
| MS.gene23621.t1 | MTR_3g452360 | 36.865 | 453 | 253 | 10 | 235 | 671 | 93 | 528 | 2.14e-93 | 299 |
| MS.gene23621.t1 | MTR_3g452360 | 38.701 | 385 | 212 | 7 | 304 | 671 | 2 | 379 | 3.47e-91 | 288 |
| MS.gene23621.t1 | MTR_7g012370 | 43.558 | 326 | 159 | 7 | 274 | 579 | 121 | 441 | 2.13e-84 | 273 |
| MS.gene23621.t1 | MTR_7g074680 | 32.371 | 485 | 296 | 7 | 197 | 672 | 103 | 564 | 7.63e-79 | 262 |
| MS.gene23621.t1 | MTR_7g074680 | 28.951 | 677 | 398 | 16 | 10 | 672 | 17 | 624 | 3.06e-78 | 262 |
| MS.gene23621.t1 | MTR_7g074680 | 32.371 | 485 | 296 | 7 | 197 | 672 | 143 | 604 | 3.40e-78 | 261 |
| MS.gene23621.t1 | MTR_7g074680 | 32.371 | 485 | 296 | 7 | 197 | 672 | 163 | 624 | 4.00e-78 | 261 |
| MS.gene23621.t1 | MTR_7g074680 | 32.371 | 485 | 296 | 7 | 197 | 672 | 183 | 644 | 6.68e-78 | 261 |
| MS.gene23621.t1 | MTR_7g074680 | 32.072 | 502 | 292 | 10 | 197 | 672 | 183 | 661 | 4.20e-75 | 254 |
| MS.gene23621.t1 | MTR_4g133942 | 56.716 | 201 | 57 | 3 | 475 | 672 | 160 | 333 | 1.18e-67 | 225 |
| MS.gene23621.t1 | MTR_6g008900 | 26.627 | 338 | 199 | 12 | 348 | 666 | 64 | 371 | 5.28e-24 | 104 |
| MS.gene23621.t1 | MTR_4g071620 | 26.627 | 338 | 199 | 12 | 348 | 666 | 64 | 371 | 5.28e-24 | 104 |
| MS.gene23621.t1 | MTR_7g094230 | 32.000 | 175 | 114 | 4 | 477 | 646 | 151 | 325 | 1.08e-21 | 97.4 |
| MS.gene23621.t1 | MTR_8g033350 | 95.238 | 42 | 2 | 0 | 1 | 42 | 1 | 42 | 1.30e-21 | 94.0 |
| MS.gene23621.t1 | MTR_5g036580 | 27.628 | 333 | 191 | 14 | 344 | 661 | 62 | 359 | 1.83e-21 | 97.4 |
| MS.gene23621.t1 | MTR_7g109210 | 27.358 | 318 | 181 | 11 | 358 | 663 | 74 | 353 | 5.65e-21 | 95.5 |
| MS.gene23621.t1 | MTR_3g092310 | 30.612 | 196 | 128 | 5 | 477 | 664 | 140 | 335 | 7.08e-21 | 95.1 |
| MS.gene23621.t1 | MTR_4g118030 | 27.413 | 259 | 157 | 8 | 419 | 646 | 62 | 320 | 7.55e-21 | 95.1 |
| MS.gene23621.t1 | MTR_3g111600 | 28.497 | 193 | 125 | 6 | 477 | 658 | 80 | 270 | 4.28e-19 | 88.6 |
| MS.gene23621.t1 | MTR_8g078240 | 27.751 | 209 | 134 | 6 | 445 | 643 | 115 | 316 | 5.62e-18 | 86.3 |
| MS.gene23621.t1 | MTR_1g021855 | 28.866 | 194 | 124 | 6 | 477 | 658 | 165 | 356 | 4.80e-17 | 84.0 |
| MS.gene23621.t1 | MTR_1g089820 | 31.429 | 175 | 115 | 3 | 477 | 646 | 154 | 328 | 2.77e-16 | 81.3 |
| MS.gene23621.t1 | MTR_5g019220 | 29.480 | 173 | 116 | 4 | 477 | 643 | 166 | 338 | 1.12e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23621.t1 | AT3G61130 | 70.852 | 669 | 190 | 3 | 6 | 673 | 9 | 673 | 0.0 | 1004 |
| MS.gene23621.t1 | AT4G38270 | 55.049 | 614 | 251 | 5 | 80 | 673 | 68 | 676 | 0.0 | 716 |
| MS.gene23621.t1 | AT4G38270 | 54.693 | 618 | 251 | 5 | 80 | 673 | 68 | 680 | 0.0 | 712 |
| MS.gene23621.t1 | AT2G46480 | 59.623 | 530 | 209 | 3 | 145 | 673 | 15 | 540 | 0.0 | 665 |
| MS.gene23621.t1 | AT2G46480 | 59.623 | 530 | 209 | 3 | 145 | 673 | 28 | 553 | 0.0 | 665 |
| MS.gene23621.t1 | AT5G47780 | 62.473 | 461 | 169 | 1 | 212 | 672 | 159 | 615 | 0.0 | 639 |
| MS.gene23621.t1 | AT2G46480 | 56.226 | 530 | 202 | 4 | 145 | 673 | 15 | 515 | 0.0 | 610 |
| MS.gene23621.t1 | AT2G46480 | 56.226 | 530 | 202 | 4 | 145 | 673 | 28 | 528 | 0.0 | 610 |
| MS.gene23621.t1 | AT3G25140 | 56.161 | 422 | 176 | 5 | 256 | 671 | 139 | 557 | 1.01e-169 | 497 |
| MS.gene23621.t1 | AT1G18580 | 47.983 | 471 | 231 | 5 | 207 | 669 | 70 | 534 | 7.60e-161 | 474 |
| MS.gene23621.t1 | AT2G20810 | 48.291 | 468 | 229 | 6 | 213 | 672 | 74 | 536 | 5.97e-152 | 451 |
| MS.gene23621.t1 | AT3G02350 | 48.723 | 470 | 221 | 6 | 220 | 671 | 92 | 559 | 2.06e-149 | 445 |
| MS.gene23621.t1 | AT1G06780 | 44.086 | 465 | 232 | 2 | 211 | 672 | 149 | 588 | 4.29e-139 | 420 |
| MS.gene23621.t1 | AT1G06780 | 44.086 | 465 | 232 | 2 | 211 | 672 | 162 | 601 | 9.03e-139 | 419 |
| MS.gene23621.t1 | AT2G30575 | 35.085 | 647 | 358 | 7 | 31 | 673 | 22 | 610 | 3.60e-137 | 416 |
| MS.gene23621.t1 | AT3G01040 | 44.498 | 418 | 215 | 5 | 273 | 673 | 115 | 532 | 6.64e-118 | 363 |
| MS.gene23621.t1 | AT3G01040 | 44.498 | 418 | 215 | 5 | 273 | 673 | 115 | 532 | 6.64e-118 | 363 |
| MS.gene23621.t1 | AT5G15470 | 45.084 | 417 | 212 | 5 | 274 | 673 | 116 | 532 | 2.20e-117 | 362 |
| MS.gene23621.t1 | AT5G54690 | 39.252 | 428 | 236 | 6 | 268 | 671 | 105 | 532 | 2.64e-111 | 346 |
| MS.gene23621.t1 | AT3G01040 | 41.627 | 418 | 194 | 6 | 273 | 673 | 115 | 499 | 3.02e-102 | 321 |
| MS.gene23621.t1 | AT2G38650 | 34.783 | 483 | 282 | 9 | 197 | 672 | 162 | 618 | 3.20e-91 | 296 |
| MS.gene23621.t1 | AT2G38650 | 34.783 | 483 | 282 | 9 | 197 | 672 | 162 | 618 | 3.20e-91 | 296 |
| MS.gene23621.t1 | AT3G58790 | 37.931 | 406 | 224 | 8 | 288 | 671 | 7 | 406 | 1.64e-88 | 282 |
| MS.gene23621.t1 | AT3G58790 | 36.385 | 426 | 243 | 8 | 268 | 671 | 119 | 538 | 1.80e-87 | 284 |
| MS.gene23621.t1 | AT2G38650 | 35.476 | 389 | 219 | 8 | 197 | 579 | 162 | 524 | 1.46e-69 | 236 |
| MS.gene23621.t1 | AT1G02720 | 27.900 | 319 | 185 | 11 | 358 | 665 | 77 | 361 | 2.28e-22 | 99.8 |
| MS.gene23621.t1 | AT1G02720 | 27.900 | 319 | 185 | 11 | 358 | 665 | 77 | 361 | 2.28e-22 | 99.8 |
| MS.gene23621.t1 | AT4G02130 | 26.543 | 324 | 193 | 10 | 353 | 665 | 57 | 346 | 3.98e-22 | 99.0 |
| MS.gene23621.t1 | AT4G02130 | 26.543 | 324 | 193 | 10 | 353 | 665 | 57 | 346 | 3.98e-22 | 99.0 |
| MS.gene23621.t1 | AT4G02130 | 26.543 | 324 | 193 | 10 | 353 | 665 | 57 | 346 | 3.98e-22 | 99.0 |
| MS.gene23621.t1 | AT3G06260 | 30.857 | 175 | 116 | 3 | 477 | 646 | 150 | 324 | 6.21e-22 | 98.2 |
| MS.gene23621.t1 | AT3G62660 | 26.498 | 317 | 185 | 10 | 358 | 663 | 79 | 358 | 6.49e-22 | 98.6 |
| MS.gene23621.t1 | AT1G70090 | 25.552 | 317 | 195 | 10 | 358 | 663 | 78 | 364 | 2.45e-21 | 97.1 |
| MS.gene23621.t1 | AT1G70090 | 25.552 | 317 | 195 | 10 | 358 | 663 | 78 | 364 | 2.45e-21 | 97.1 |
| MS.gene23621.t1 | AT3G28340 | 29.536 | 237 | 150 | 9 | 443 | 667 | 126 | 357 | 1.05e-20 | 95.1 |
| MS.gene23621.t1 | AT1G19300 | 30.857 | 175 | 111 | 5 | 477 | 643 | 150 | 322 | 5.98e-19 | 89.4 |
| MS.gene23621.t1 | AT1G24170 | 23.975 | 317 | 200 | 9 | 358 | 663 | 81 | 367 | 1.95e-18 | 88.6 |
| MS.gene23621.t1 | AT3G50760 | 26.633 | 199 | 133 | 5 | 475 | 662 | 134 | 330 | 6.39e-16 | 80.1 |
| MS.gene23621.t1 | AT1G13250 | 25.926 | 324 | 197 | 11 | 353 | 666 | 51 | 341 | 1.30e-15 | 79.3 |
Find 141 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTACTGATAAACTCAATTT+TGG | 0.156608 | 8.1:-67758344 | MS.gene23621:CDS |
| TTGAGCATCGAGAGATATTT+TGG | 0.169108 | 8.1:+67758119 | None:intergenic |
| CCAGGACTAATGACATTCTA+TGG | 0.231543 | 8.1:-67757636 | MS.gene23621:CDS |
| AGAAGGATTTGACAGGATTA+TGG | 0.240515 | 8.1:-67758019 | MS.gene23621:CDS |
| CTTTCGAAAAGGTTGATTTA+AGG | 0.265980 | 8.1:+67760623 | None:intergenic |
| TGTATCCAGCACAGATGATA+TGG | 0.277199 | 8.1:-67760499 | MS.gene23621:CDS |
| CGATGTCATCATCAAGAAAA+AGG | 0.314739 | 8.1:+67758048 | None:intergenic |
| TGACAAAGTATCGGCCTTAC+TGG | 0.316170 | 8.1:-67757479 | MS.gene23621:CDS |
| TCGTGGCATGTCCTTGGTTT+GGG | 0.323379 | 8.1:-67757591 | MS.gene23621:CDS |
| TCTAATTTAGGATAAACTTC+TGG | 0.323521 | 8.1:+67758077 | None:intergenic |
| ATATCACAAATGGCAAAATA+TGG | 0.336591 | 8.1:-67757805 | MS.gene23621:intron |
| ATTATGGGAAGTTGATCTTC+AGG | 0.339063 | 8.1:-67758003 | MS.gene23621:CDS |
| ATCGTGGCATGTCCTTGGTT+TGG | 0.342505 | 8.1:-67757592 | MS.gene23621:CDS |
| GATCTTCAGGGGAAAGTAAA+TGG | 0.342595 | 8.1:-67757990 | MS.gene23621:CDS |
| AAAGAGAGTCAACATGCTTT+AGG | 0.370001 | 8.1:-67759059 | MS.gene23621:CDS |
| ATCCGTTGAGTCAGCCGTAC+TGG | 0.374295 | 8.1:-67759237 | MS.gene23621:CDS |
| ATTCTTCTGTTCGGTTTATG+AGG | 0.374399 | 8.1:-67759169 | MS.gene23621:CDS |
| GTGAAGGAAGGAAGATCTTC+AGG | 0.374727 | 8.1:-67760229 | MS.gene23621:intron |
| TATGAGGGACCAGATCATTA+TGG | 0.376231 | 8.1:-67759153 | MS.gene23621:CDS |
| GAAGGATTTGACAGGATTAT+GGG | 0.385355 | 8.1:-67758018 | MS.gene23621:CDS |
| TCTTGTGTAACATGTGTTGT+TGG | 0.388574 | 8.1:+67760262 | None:intergenic |
| AATGAAAGAGTATTATTTCA+AGG | 0.389390 | 8.1:-67758195 | MS.gene23621:CDS |
| TACTGGGTAAATACAGCATT+TGG | 0.389876 | 8.1:-67759220 | MS.gene23621:CDS |
| GACAGGGTGCTTTGGAAGCT+GGG | 0.390513 | 8.1:-67757669 | MS.gene23621:CDS |
| CATTCTCTCCATTTGGCAGC+TGG | 0.391161 | 8.1:+67760661 | None:intergenic |
| CCCGTGCCTTTGACAGAACT+TGG | 0.391358 | 8.1:+67758892 | None:intergenic |
| TAGTACACGTCAAGAAATAA+AGG | 0.392316 | 8.1:-67758922 | MS.gene23621:CDS |
| AGACAGCTGATGAGAAAGTT+AGG | 0.401919 | 8.1:-67758818 | MS.gene23621:CDS |
| ACATGCCACGATTTATTTAG+TGG | 0.403063 | 8.1:+67757603 | None:intergenic |
| GATTCAAGCTGCCGCAATAC+AGG | 0.410074 | 8.1:+67758224 | None:intergenic |
| AATGCTTGTGGTTGGGCATA+TGG | 0.411331 | 8.1:-67757879 | MS.gene23621:CDS |
| TCAAAGTTTCTTGCAATATG+TGG | 0.412409 | 8.1:+67757906 | None:intergenic |
| TATGCCCAACCACAAGCATT+TGG | 0.412414 | 8.1:+67757882 | None:intergenic |
| AGTTAAGATATTTGTCAAAT+CGG | 0.415942 | 8.1:+67757937 | None:intergenic |
| GTTCCCTAGGAGTGAGAACT+TGG | 0.416886 | 8.1:-67758673 | MS.gene23621:CDS |
| TGCATGCCATTCTCTCCATT+TGG | 0.432054 | 8.1:+67760654 | None:intergenic |
| GTGCAGAGGGTCTTACTCAC+TGG | 0.437169 | 8.1:-67760138 | MS.gene23621:intron |
| AGACAGGGTGCTTTGGAAGC+TGG | 0.437302 | 8.1:-67757670 | MS.gene23621:CDS |
| CAAAAGAAACCACATGTTCA+TGG | 0.440335 | 8.1:+67758319 | None:intergenic |
| AATTCCACTTGGTATGGTCT+TGG | 0.447689 | 8.1:+67758755 | None:intergenic |
| TGGGTTTCTATATTTCATAT+TGG | 0.450004 | 8.1:+67758139 | None:intergenic |
| GCGAAGGAAACCCCTCGCTT+TGG | 0.450681 | 8.1:+67764814 | None:intergenic |
| AGATGGAAAACATGCTTTGA+AGG | 0.460806 | 8.1:+67758368 | None:intergenic |
| AGAAGAACGAAACTCAAAAC+AGG | 0.462128 | 8.1:+67764763 | None:intergenic |
| GACTTCAAATGCTGCCTATG+AGG | 0.462603 | 8.1:-67760412 | MS.gene23621:intron |
| AAAATGCTGATTCTTCTGTT+CGG | 0.464420 | 8.1:-67759178 | MS.gene23621:CDS |
| TTAACATATTTAGTCCAGTA+AGG | 0.464878 | 8.1:+67757465 | None:intergenic |
| AAGGAAACCCCTCGCTTTGG+CGG | 0.468661 | 8.1:+67764817 | None:intergenic |
| TAACTTGCATTTCTGCAGAT+AGG | 0.469528 | 8.1:+67757431 | None:intergenic |
| CCAAGTTCTGTCAAAGGCAC+GGG | 0.472286 | 8.1:-67758892 | MS.gene23621:CDS |
| AATAAATCGTGGCATGTCCT+TGG | 0.472321 | 8.1:-67757597 | MS.gene23621:CDS |
| AAAGAGTATTATTTCAAGGC+AGG | 0.473099 | 8.1:-67758191 | MS.gene23621:CDS |
| AGAATGAAGACAGGGTGCTT+TGG | 0.476034 | 8.1:-67757677 | MS.gene23621:CDS |
| TGAGTTTATCAGTAACAAGA+TGG | 0.477741 | 8.1:+67758351 | None:intergenic |
| ACGTCAAGAAATAAAGGCTA+TGG | 0.478191 | 8.1:-67758916 | MS.gene23621:CDS |
| CTAAAATTGTCAAGACTCAA+AGG | 0.478518 | 8.1:+67760474 | None:intergenic |
| CCATAGAATGTCATTAGTCC+TGG | 0.482123 | 8.1:+67757636 | None:intergenic |
| CACATTAGTCCAAACCTCAT+AGG | 0.483893 | 8.1:+67760398 | None:intergenic |
| TGCTGCTGAGTTGGTAAAGA+TGG | 0.489018 | 8.1:-67759309 | MS.gene23621:CDS |
| TGATCCAAATGCTTGTGGTT+GGG | 0.490330 | 8.1:-67757886 | MS.gene23621:CDS |
| TGTTGCAAGAGCTGCAGTCT+AGG | 0.490652 | 8.1:-67759085 | MS.gene23621:CDS |
| CTGATTCAGATCTTCATCAC+AGG | 0.491823 | 8.1:-67759025 | MS.gene23621:intron |
| TATTGGAAGCACTAGAAGAA+AGG | 0.491924 | 8.1:+67758156 | None:intergenic |
| GCACTAGAAGAAAGGGTGGT+TGG | 0.493295 | 8.1:+67758164 | None:intergenic |
| TAGTGCATAATGATAAAGAC+TGG | 0.499652 | 8.1:+67758644 | None:intergenic |
| TGAGCTTGCCTCTTTCGAAA+AGG | 0.499717 | 8.1:+67760612 | None:intergenic |
| CAGCTGCCAAATGGAGAGAA+TGG | 0.501284 | 8.1:-67760660 | MS.gene23621:CDS |
| AGGCCCCATATCATCTGTGC+TGG | 0.501711 | 8.1:+67760494 | None:intergenic |
| TCTGCGTCATGGAGAGTTGT+TGG | 0.501808 | 8.1:-67760441 | MS.gene23621:CDS |
| CCCTTCGGACTTGTCGTGTA+GGG | 0.504060 | 8.1:+67760107 | None:intergenic |
| TATGACAGCAAGTTGGTCAC+TGG | 0.506011 | 8.1:-67758861 | MS.gene23621:CDS |
| ATTGGAAGCACTAGAAGAAA+GGG | 0.507070 | 8.1:+67758157 | None:intergenic |
| ATACCCTAGCCATAATGATC+TGG | 0.507931 | 8.1:+67759144 | None:intergenic |
| TTCTCCAAGTTCTCACTCCT+AGG | 0.508939 | 8.1:+67758669 | None:intergenic |
| CGACCGAAGAAGAAAACAAC+CGG | 0.513869 | 8.1:+67764727 | None:intergenic |
| TTATGGGAAGTTGATCTTCA+GGG | 0.517146 | 8.1:-67758002 | MS.gene23621:CDS |
| GTATCCAGCACAGATGATAT+GGG | 0.517429 | 8.1:-67760498 | MS.gene23621:CDS |
| TTCTTCTGTTCGGTTTATGA+GGG | 0.518856 | 8.1:-67759168 | MS.gene23621:CDS |
| TGATGACATCGTTGTTCAGA+AGG | 0.518905 | 8.1:-67758036 | MS.gene23621:CDS |
| GACTGCAGCCAGCTGCCAAA+TGG | 0.519016 | 8.1:-67760669 | MS.gene23621:intron |
| GTTGTTCAGAAGGATTTGAC+AGG | 0.522397 | 8.1:-67758026 | MS.gene23621:CDS |
| TCACTGGCATATATCACAAA+TGG | 0.525538 | 8.1:-67757815 | MS.gene23621:CDS |
| TTCAGCTGCTGCAAATAGAC+AGG | 0.526888 | 8.1:-67760779 | MS.gene23621:intron |
| GCAATGAATTCCACTTGGTA+TGG | 0.527610 | 8.1:+67758749 | None:intergenic |
| GGAAAAGCGTGCTGCTGAGT+TGG | 0.528593 | 8.1:-67759318 | MS.gene23621:CDS |
| ATCATTGATCGATCTACAGT+TGG | 0.532779 | 8.1:+67757561 | None:intergenic |
| TTGATCCAAATGCTTGTGGT+TGG | 0.535817 | 8.1:-67757887 | MS.gene23621:CDS |
| TCCGTTGAGTCAGCCGTACT+GGG | 0.541366 | 8.1:-67759236 | MS.gene23621:CDS |
| ACGAAATGCCGCCAAAGCGA+GGG | 0.543012 | 8.1:-67764825 | None:intergenic |
| CATGAACGTATTTGATCTCA+AGG | 0.549062 | 8.1:-67757856 | MS.gene23621:CDS |
| TAGAAGAAAGGGTGGTTGGA+TGG | 0.549689 | 8.1:+67758168 | None:intergenic |
| GCCAAGTTCTGTCAAAGGCA+CGG | 0.552166 | 8.1:-67758893 | MS.gene23621:CDS |
| ACCCAGTACGGCTGACTCAA+CGG | 0.556868 | 8.1:+67759235 | None:intergenic |
| CTGCCGCAATACAGGGCAGT+AGG | 0.560064 | 8.1:+67758232 | None:intergenic |
| CATCCTACTGCCCTGTATTG+CGG | 0.562221 | 8.1:-67758235 | MS.gene23621:CDS |
| AACTTTGATCCAAATGCTTG+TGG | 0.562703 | 8.1:-67757891 | MS.gene23621:CDS |
| ACCCTTCGGACTTGTCGTGT+AGG | 0.562800 | 8.1:+67760106 | None:intergenic |
| CAGGACTAATGACATTCTAT+GGG | 0.563214 | 8.1:-67757635 | MS.gene23621:CDS |
| GGACCAGATCATTATGGCTA+GGG | 0.565156 | 8.1:-67759147 | MS.gene23621:CDS |
| GGGGTTTCCTTCGCTAAGAA+CGG | 0.566743 | 8.1:-67764805 | MS.gene23621:CDS |
| GGGACCAGATCATTATGGCT+AGG | 0.569661 | 8.1:-67759148 | MS.gene23621:CDS |
| CAAGTTCTGTCAAAGGCACG+GGG | 0.571586 | 8.1:-67758891 | MS.gene23621:CDS |
| TTCGCTAAGAACGGAAGCAA+AGG | 0.572869 | 8.1:-67764796 | MS.gene23621:CDS |
| CTGGAAGATAGAATCTAAGA+TGG | 0.575970 | 8.1:+67758096 | None:intergenic |
| TGGGTAAATACAGCATTTGG+AGG | 0.579641 | 8.1:-67759217 | MS.gene23621:CDS |
| TACGAAATGCCGCCAAAGCG+AGG | 0.583617 | 8.1:-67764826 | None:intergenic |
| TTTGCTTCCGTTCTTAGCGA+AGG | 0.586731 | 8.1:+67764798 | None:intergenic |
| AATGCTGTATTTACCCAGTA+CGG | 0.587071 | 8.1:+67759223 | None:intergenic |
| CGTCAAGAAATAAAGGCTAT+GGG | 0.590218 | 8.1:-67758915 | MS.gene23621:CDS |
| AAGCACATTCCTCAGTCAGT+TGG | 0.593627 | 8.1:-67758781 | MS.gene23621:CDS |
| TATGGGAAGTTGATCTTCAG+GGG | 0.594151 | 8.1:-67758001 | MS.gene23621:CDS |
| CTCAGCTGTTACAAATGCAA+AGG | 0.595673 | 8.1:-67758583 | MS.gene23621:intron |
| TCTTCTCTGTGTTCTTACGC+CGG | 0.598718 | 8.1:-67764746 | MS.gene23621:CDS |
| ATTCAAGCTGCCGCAATACA+GGG | 0.605492 | 8.1:+67758225 | None:intergenic |
| CGATTGCCATGACAAAGTAT+CGG | 0.606224 | 8.1:-67757488 | MS.gene23621:CDS |
| TCTCCAAGTTCTCACTCCTA+GGG | 0.606744 | 8.1:+67758670 | None:intergenic |
| GCCCTACACGACAAGTCCGA+AGG | 0.608010 | 8.1:-67760108 | MS.gene23621:CDS |
| AAGCTGGGGACATTACCTCC+AGG | 0.613770 | 8.1:-67757654 | MS.gene23621:CDS |
| GTCATGGCAATCGCTAGCCA+CGG | 0.617762 | 8.1:+67757498 | None:intergenic |
| TATGGGCCAAGTTCTGTCAA+AGG | 0.623145 | 8.1:-67758898 | MS.gene23621:CDS |
| ACAGGGTGCTTTGGAAGCTG+GGG | 0.627413 | 8.1:-67757668 | MS.gene23621:CDS |
| GCAATTGTATGACAGCAAGT+TGG | 0.629238 | 8.1:-67758868 | MS.gene23621:CDS |
| CGAAATGCCGCCAAAGCGAG+GGG | 0.634044 | 8.1:-67764824 | None:intergenic |
| TCTTGGCAGCCAACTGACTG+AGG | 0.635206 | 8.1:+67758772 | None:intergenic |
| CACATCCACTAAATAAATCG+TGG | 0.637959 | 8.1:-67757608 | MS.gene23621:CDS |
| CCCTACACGACAAGTCCGAA+GGG | 0.638020 | 8.1:-67760107 | MS.gene23621:intron |
| ACGTATTTGATCTCAAGGAG+TGG | 0.640381 | 8.1:-67757851 | MS.gene23621:CDS |
| GATAAGCAATGAATTCCACT+TGG | 0.641239 | 8.1:+67758744 | None:intergenic |
| AGTGCATAATGATAAAGACT+GGG | 0.649951 | 8.1:+67758645 | None:intergenic |
| GCAGCAGTTGTACATTACAA+TGG | 0.655408 | 8.1:-67757531 | MS.gene23621:CDS |
| GTAAGGCCGATACTTTGTCA+TGG | 0.657953 | 8.1:+67757482 | None:intergenic |
| TAGAATGTCATTAGTCCTGG+AGG | 0.659704 | 8.1:+67757639 | None:intergenic |
| GGAGGTAGTAATCTATTGTG+AGG | 0.664103 | 8.1:+67758715 | None:intergenic |
| TATCCAGCACAGATGATATG+GGG | 0.668316 | 8.1:-67760497 | MS.gene23621:CDS |
| GGAAGCACTAGAAGAAAGGG+TGG | 0.674642 | 8.1:+67758160 | None:intergenic |
| AACAGCTGAGTTCACAACAA+CGG | 0.690951 | 8.1:+67758596 | None:intergenic |
| ACAATGGTAATATGAAGCCG+TGG | 0.696694 | 8.1:-67757515 | MS.gene23621:CDS |
| TTGGACTATAACCCAAACCA+AGG | 0.706567 | 8.1:+67757580 | None:intergenic |
| GCTGCCAAGACCATACCAAG+TGG | 0.721158 | 8.1:-67758759 | MS.gene23621:CDS |
| AATGGTGCAGTTGAAACATG+TGG | 0.724609 | 8.1:-67757972 | MS.gene23621:CDS |
| AAGTTCTGTCAAAGGCACGG+GGG | 0.753594 | 8.1:-67758890 | MS.gene23621:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 67757422 | 67764842 | 67757422 | ID=MS.gene23621 |
| chr8.1 | mRNA | 67757422 | 67764842 | 67757422 | ID=MS.gene23621.t1;Parent=MS.gene23621 |
| chr8.1 | exon | 67764710 | 67764842 | 67764710 | ID=MS.gene23621.t1.exon1;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67764710 | 67764842 | 67764710 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67760780 | 67760814 | 67760780 | ID=MS.gene23621.t1.exon2;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67760780 | 67760814 | 67760780 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67760621 | 67760683 | 67760621 | ID=MS.gene23621.t1.exon3;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67760621 | 67760683 | 67760621 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67760413 | 67760535 | 67760413 | ID=MS.gene23621.t1.exon4;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67760413 | 67760535 | 67760413 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67760230 | 67760293 | 67760230 | ID=MS.gene23621.t1.exon5;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67760230 | 67760293 | 67760230 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67760108 | 67760154 | 67760108 | ID=MS.gene23621.t1.exon6;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67760108 | 67760154 | 67760108 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67759026 | 67759360 | 67759026 | ID=MS.gene23621.t1.exon7;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67759026 | 67759360 | 67759026 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67758584 | 67758941 | 67758584 | ID=MS.gene23621.t1.exon8;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67758584 | 67758941 | 67758584 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67757806 | 67758393 | 67757806 | ID=MS.gene23621.t1.exon9;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67757806 | 67758393 | 67757806 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| chr8.1 | exon | 67757422 | 67757697 | 67757422 | ID=MS.gene23621.t1.exon10;Parent=MS.gene23621.t1 |
| chr8.1 | CDS | 67757422 | 67757697 | 67757422 | ID=cds.MS.gene23621.t1;Parent=MS.gene23621.t1 |
| Gene Sequence |
| Protein sequence |
