Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28299.t1 | XP_003599325.1 | 99.4 | 319 | 2 | 0 | 1 | 319 | 1 | 319 | 3.30E-179 | 637.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28299.t1 | Q9S9N9 | 41.8 | 316 | 177 | 3 | 3 | 317 | 11 | 320 | 8.6e-67 | 255.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28299.t1 | G7J0Q8 | 99.4 | 319 | 2 | 0 | 1 | 319 | 1 | 319 | 2.4e-179 | 637.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene28299 | 0.834666 | 2.63E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene28299 | 0.804719 | 1.89E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene28299 | 0.810653 | 1.04E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene28299 | 0.827545 | 1.47E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene28299 | 0.816891 | 4.38E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene28299 | 0.812035 | 5.19E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene28299 | 0.813498 | 2.48E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene28299 | 0.826637 | 2.43E-54 | -1.69E-46 |
| MS.gene050502 | MS.gene28299 | 0.817895 | 2.60E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene28299 | 0.845991 | 2.87E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene28299 | 0.847302 | 1.26E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene28299 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene28299 | 0.824647 | 7.21E-54 | -1.69E-46 |
| MS.gene052066 | MS.gene28299 | 0.814325 | 1.63E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene28299 | 0.803008 | 4.28E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene28299 | 0.804918 | 1.71E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene28299 | 0.862673 | 4.29E-64 | -1.69E-46 |
| MS.gene052999 | MS.gene28299 | 0.816889 | 4.38E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene28299 | 0.80119 | 1.01E-48 | -1.69E-46 |
| MS.gene053824 | MS.gene28299 | 0.805972 | 1.03E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene28299 | 0.810448 | 1.15E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene28299 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene05492 | MS.gene28299 | 0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene28299 | 0.805426 | 1.34E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene28299 | 0.82866 | 7.95E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene28299 | 0.839077 | 1.97E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene28299 | 0.810361 | 1.20E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene28299 | 0.840599 | 7.89E-58 | -1.69E-46 |
| MS.gene057086 | MS.gene28299 | 0.835651 | 1.48E-56 | -1.69E-46 |
| MS.gene058978 | MS.gene28299 | -0.820359 | 7.15E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene28299 | 0.804602 | 2.00E-49 | -1.69E-46 |
| MS.gene059129 | MS.gene28299 | 0.873459 | 1.45E-67 | -1.69E-46 |
| MS.gene059865 | MS.gene28299 | 0.812358 | 4.41E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene28299 | 0.812023 | 5.22E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene28299 | 0.816149 | 6.42E-52 | -1.69E-46 |
| MS.gene06097 | MS.gene28299 | 0.805471 | 1.31E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene28299 | 0.812701 | 3.71E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28299.t1 | MTR_3g031650 | 99.373 | 319 | 2 | 0 | 1 | 319 | 1 | 319 | 0.0 | 652 |
| MS.gene28299.t1 | MTR_3g031650 | 99.634 | 273 | 1 | 0 | 1 | 273 | 1 | 273 | 0.0 | 562 |
| MS.gene28299.t1 | MTR_5g072620 | 68.966 | 319 | 99 | 0 | 1 | 319 | 1 | 319 | 9.40e-174 | 484 |
| MS.gene28299.t1 | MTR_2g028620 | 47.352 | 321 | 159 | 4 | 5 | 319 | 10 | 326 | 1.15e-106 | 315 |
| MS.gene28299.t1 | MTR_2g028620 | 46.739 | 276 | 137 | 4 | 5 | 274 | 10 | 281 | 2.12e-88 | 267 |
| MS.gene28299.t1 | MTR_3g005210 | 43.302 | 321 | 176 | 5 | 2 | 319 | 3 | 320 | 1.15e-87 | 266 |
| MS.gene28299.t1 | MTR_3g005170 | 43.492 | 315 | 172 | 5 | 5 | 316 | 10 | 321 | 5.34e-86 | 261 |
| MS.gene28299.t1 | MTR_4g006940 | 43.038 | 316 | 173 | 3 | 3 | 317 | 15 | 324 | 6.77e-81 | 249 |
| MS.gene28299.t1 | MTR_2g104960 | 43.038 | 316 | 173 | 3 | 3 | 317 | 18 | 327 | 9.49e-80 | 246 |
| MS.gene28299.t1 | MTR_3g005170 | 44.649 | 271 | 144 | 5 | 1 | 268 | 6 | 273 | 5.16e-78 | 239 |
| MS.gene28299.t1 | MTR_4g077100 | 38.608 | 316 | 190 | 4 | 3 | 316 | 9 | 322 | 4.43e-75 | 234 |
| MS.gene28299.t1 | MTR_8g062440 | 38.245 | 319 | 192 | 4 | 3 | 319 | 6 | 321 | 5.56e-74 | 231 |
| MS.gene28299.t1 | MTR_3g005170 | 40.000 | 315 | 152 | 5 | 5 | 316 | 10 | 290 | 2.96e-73 | 228 |
| MS.gene28299.t1 | MTR_8g062110 | 37.931 | 319 | 193 | 4 | 3 | 319 | 7 | 322 | 3.20e-73 | 229 |
| MS.gene28299.t1 | MTR_8g062110 | 37.931 | 319 | 193 | 4 | 3 | 319 | 16 | 331 | 4.97e-73 | 229 |
| MS.gene28299.t1 | MTR_4g009040 | 38.679 | 318 | 191 | 2 | 2 | 319 | 10 | 323 | 1.85e-72 | 227 |
| MS.gene28299.t1 | MTR_8g062440 | 38.125 | 320 | 192 | 5 | 3 | 319 | 6 | 322 | 4.67e-72 | 226 |
| MS.gene28299.t1 | MTR_4g006940 | 44.569 | 267 | 142 | 2 | 3 | 269 | 15 | 275 | 2.19e-71 | 223 |
| MS.gene28299.t1 | MTR_4g006940 | 44.569 | 267 | 142 | 2 | 3 | 269 | 15 | 275 | 2.19e-71 | 223 |
| MS.gene28299.t1 | MTR_4g009040 | 38.199 | 322 | 191 | 3 | 2 | 319 | 10 | 327 | 2.66e-70 | 221 |
| MS.gene28299.t1 | MTR_4g077130 | 37.224 | 317 | 193 | 5 | 3 | 316 | 7 | 320 | 1.07e-69 | 220 |
| MS.gene28299.t1 | MTR_2g101330 | 37.812 | 320 | 193 | 4 | 1 | 317 | 1 | 317 | 1.40e-69 | 219 |
| MS.gene28299.t1 | MTR_4g077100 | 40.590 | 271 | 157 | 4 | 3 | 271 | 9 | 277 | 6.37e-69 | 216 |
| MS.gene28299.t1 | MTR_1g022440 | 37.846 | 325 | 193 | 6 | 1 | 319 | 4 | 325 | 2.15e-68 | 217 |
| MS.gene28299.t1 | MTR_8g062110 | 39.706 | 272 | 159 | 4 | 3 | 272 | 7 | 275 | 8.89e-67 | 211 |
| MS.gene28299.t1 | MTR_8g062440 | 41.199 | 267 | 152 | 4 | 3 | 267 | 6 | 269 | 1.04e-66 | 212 |
| MS.gene28299.t1 | MTR_8g062110 | 39.706 | 272 | 159 | 4 | 3 | 272 | 7 | 275 | 1.20e-66 | 211 |
| MS.gene28299.t1 | MTR_4g009690 | 38.365 | 318 | 192 | 2 | 2 | 319 | 10 | 323 | 1.21e-65 | 209 |
| MS.gene28299.t1 | MTR_4g009690 | 38.679 | 318 | 190 | 3 | 2 | 319 | 10 | 322 | 2.08e-65 | 209 |
| MS.gene28299.t1 | MTR_1g022445 | 35.866 | 329 | 194 | 7 | 1 | 319 | 4 | 325 | 1.35e-64 | 207 |
| MS.gene28299.t1 | MTR_5g056600 | 33.750 | 320 | 201 | 3 | 6 | 319 | 5 | 319 | 5.28e-64 | 205 |
| MS.gene28299.t1 | MTR_7g074880 | 36.778 | 329 | 184 | 9 | 5 | 319 | 8 | 326 | 1.10e-59 | 194 |
| MS.gene28299.t1 | MTR_7g074820 | 35.650 | 331 | 188 | 11 | 5 | 319 | 8 | 329 | 1.73e-54 | 181 |
| MS.gene28299.t1 | MTR_7g074850 | 35.347 | 331 | 189 | 10 | 5 | 319 | 8 | 329 | 2.65e-54 | 180 |
| MS.gene28299.t1 | MTR_7g074730 | 34.731 | 334 | 186 | 12 | 5 | 319 | 8 | 328 | 1.95e-51 | 173 |
| MS.gene28299.t1 | MTR_7g074710 | 33.851 | 322 | 203 | 7 | 5 | 319 | 8 | 326 | 4.20e-51 | 172 |
| MS.gene28299.t1 | MTR_4g092080 | 32.931 | 331 | 202 | 9 | 3 | 318 | 12 | 337 | 7.36e-50 | 169 |
| MS.gene28299.t1 | MTR_4g081440 | 34.971 | 346 | 176 | 12 | 6 | 319 | 21 | 349 | 2.30e-49 | 168 |
| MS.gene28299.t1 | MTR_4g081440 | 34.870 | 347 | 176 | 12 | 6 | 319 | 25 | 354 | 4.10e-49 | 167 |
| MS.gene28299.t1 | MTR_4g023730 | 31.045 | 335 | 200 | 10 | 4 | 319 | 7 | 329 | 1.98e-47 | 162 |
| MS.gene28299.t1 | MTR_8g062110 | 34.211 | 228 | 146 | 3 | 94 | 319 | 11 | 236 | 3.94e-42 | 146 |
| MS.gene28299.t1 | MTR_7g074870 | 31.849 | 292 | 176 | 8 | 41 | 319 | 7 | 288 | 1.14e-38 | 138 |
| MS.gene28299.t1 | MTR_8g062110 | 35.912 | 181 | 112 | 3 | 94 | 272 | 11 | 189 | 5.46e-36 | 129 |
| MS.gene28299.t1 | MTR_2g013230 | 31.085 | 341 | 197 | 12 | 5 | 317 | 8 | 338 | 1.40e-35 | 132 |
| MS.gene28299.t1 | MTR_2g013250 | 28.994 | 338 | 208 | 9 | 5 | 317 | 7 | 337 | 1.88e-32 | 123 |
| MS.gene28299.t1 | MTR_2g013260 | 31.176 | 340 | 198 | 11 | 5 | 317 | 8 | 338 | 2.03e-32 | 123 |
| MS.gene28299.t1 | MTR_5g029990 | 29.316 | 307 | 189 | 10 | 2 | 299 | 9 | 296 | 4.02e-31 | 119 |
| MS.gene28299.t1 | MTR_7g117190 | 30.383 | 339 | 203 | 13 | 5 | 317 | 7 | 338 | 5.22e-31 | 119 |
| MS.gene28299.t1 | MTR_2g013260 | 31.741 | 293 | 167 | 9 | 5 | 271 | 8 | 293 | 4.64e-30 | 115 |
| MS.gene28299.t1 | MTR_7g117190 | 30.612 | 294 | 174 | 11 | 5 | 273 | 7 | 295 | 3.60e-28 | 111 |
| MS.gene28299.t1 | MTR_0164s0070 | 41.538 | 130 | 75 | 1 | 1 | 129 | 1 | 130 | 1.67e-25 | 101 |
| MS.gene28299.t1 | MTR_0685s0030 | 30.625 | 160 | 110 | 1 | 157 | 316 | 1 | 159 | 7.21e-24 | 95.9 |
| MS.gene28299.t1 | MTR_6g406250 | 28.346 | 254 | 172 | 6 | 5 | 252 | 55 | 304 | 1.05e-22 | 97.1 |
| MS.gene28299.t1 | MTR_6g406250 | 28.571 | 210 | 144 | 4 | 5 | 209 | 55 | 263 | 4.02e-18 | 82.8 |
| MS.gene28299.t1 | MTR_0685s0030 | 32.174 | 115 | 77 | 1 | 157 | 271 | 1 | 114 | 5.73e-18 | 79.0 |
| MS.gene28299.t1 | MTR_3g011130 | 35.714 | 112 | 69 | 3 | 97 | 205 | 30 | 141 | 1.38e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28299.t1 | AT5G58490 | 66.032 | 315 | 107 | 0 | 5 | 319 | 9 | 323 | 1.57e-161 | 453 |
| MS.gene28299.t1 | AT2G02400 | 47.799 | 318 | 162 | 2 | 3 | 319 | 4 | 318 | 8.08e-112 | 327 |
| MS.gene28299.t1 | AT1G51410 | 43.750 | 320 | 174 | 5 | 3 | 319 | 7 | 323 | 5.09e-88 | 267 |
| MS.gene28299.t1 | AT5G19440 | 41.509 | 318 | 182 | 4 | 3 | 318 | 8 | 323 | 2.81e-84 | 257 |
| MS.gene28299.t1 | AT1G09480 | 41.066 | 319 | 184 | 4 | 3 | 319 | 6 | 322 | 6.16e-83 | 254 |
| MS.gene28299.t1 | AT1G09480 | 41.066 | 319 | 184 | 4 | 3 | 319 | 53 | 369 | 2.44e-82 | 254 |
| MS.gene28299.t1 | AT1G09510 | 41.066 | 319 | 184 | 4 | 3 | 319 | 6 | 322 | 6.85e-82 | 251 |
| MS.gene28299.t1 | AT1G09490 | 37.812 | 320 | 193 | 5 | 3 | 319 | 6 | 322 | 1.39e-77 | 240 |
| MS.gene28299.t1 | AT1G66800 | 41.195 | 318 | 181 | 4 | 3 | 319 | 6 | 318 | 1.89e-77 | 239 |
| MS.gene28299.t1 | AT1G15950 | 41.772 | 316 | 177 | 3 | 3 | 317 | 11 | 320 | 9.96e-77 | 238 |
| MS.gene28299.t1 | AT1G15950 | 41.772 | 316 | 177 | 3 | 3 | 317 | 11 | 320 | 9.96e-77 | 238 |
| MS.gene28299.t1 | AT1G15950 | 42.020 | 307 | 171 | 3 | 3 | 308 | 11 | 311 | 6.60e-74 | 231 |
| MS.gene28299.t1 | AT1G09500 | 38.629 | 321 | 192 | 5 | 3 | 319 | 6 | 325 | 1.90e-73 | 229 |
| MS.gene28299.t1 | AT2G33590 | 40.190 | 316 | 184 | 3 | 5 | 319 | 9 | 320 | 9.85e-72 | 225 |
| MS.gene28299.t1 | AT1G80820 | 39.873 | 316 | 183 | 4 | 3 | 317 | 6 | 315 | 3.33e-70 | 221 |
| MS.gene28299.t1 | AT1G15950 | 43.165 | 278 | 149 | 3 | 3 | 280 | 11 | 279 | 4.44e-70 | 219 |
| MS.gene28299.t1 | AT1G15950 | 43.820 | 267 | 144 | 2 | 3 | 269 | 11 | 271 | 1.80e-69 | 218 |
| MS.gene28299.t1 | AT1G15950 | 43.273 | 275 | 147 | 3 | 3 | 277 | 11 | 276 | 4.89e-69 | 217 |
| MS.gene28299.t1 | AT1G09500 | 39.706 | 272 | 161 | 3 | 3 | 272 | 6 | 276 | 5.17e-69 | 216 |
| MS.gene28299.t1 | AT4G35420 | 37.072 | 321 | 189 | 6 | 5 | 319 | 8 | 321 | 6.98e-67 | 213 |
| MS.gene28299.t1 | AT1G80820 | 41.948 | 267 | 149 | 3 | 3 | 269 | 6 | 266 | 1.67e-63 | 202 |
| MS.gene28299.t1 | AT2G33600 | 38.608 | 316 | 189 | 3 | 5 | 319 | 9 | 320 | 2.02e-62 | 201 |
| MS.gene28299.t1 | AT1G68540 | 33.438 | 320 | 202 | 4 | 7 | 319 | 6 | 321 | 4.53e-61 | 197 |
| MS.gene28299.t1 | AT1G76470 | 35.938 | 320 | 200 | 3 | 1 | 317 | 3 | 320 | 3.90e-60 | 195 |
| MS.gene28299.t1 | AT1G09490 | 34.266 | 286 | 182 | 5 | 37 | 319 | 9 | 291 | 1.91e-59 | 192 |
| MS.gene28299.t1 | AT5G42800 | 34.985 | 323 | 201 | 6 | 3 | 319 | 6 | 325 | 8.81e-57 | 188 |
| MS.gene28299.t1 | AT1G09500 | 35.540 | 287 | 180 | 5 | 37 | 319 | 6 | 291 | 1.74e-55 | 182 |
| MS.gene28299.t1 | AT1G25460 | 34.365 | 323 | 193 | 8 | 7 | 319 | 6 | 319 | 4.23e-55 | 182 |
| MS.gene28299.t1 | AT1G61720 | 33.533 | 334 | 200 | 9 | 2 | 319 | 10 | 337 | 6.51e-49 | 167 |
| MS.gene28299.t1 | AT1G15950 | 39.640 | 222 | 133 | 1 | 97 | 317 | 1 | 222 | 4.10e-46 | 156 |
| MS.gene28299.t1 | AT4G27250 | 32.132 | 333 | 195 | 12 | 4 | 311 | 12 | 338 | 3.73e-42 | 149 |
| MS.gene28299.t1 | AT4G27250 | 31.692 | 325 | 197 | 11 | 4 | 311 | 12 | 328 | 8.76e-41 | 145 |
| MS.gene28299.t1 | AT2G23910 | 32.669 | 251 | 155 | 5 | 6 | 252 | 11 | 251 | 3.21e-39 | 139 |
| MS.gene28299.t1 | AT2G23910 | 32.669 | 251 | 155 | 5 | 6 | 252 | 11 | 251 | 3.24e-39 | 139 |
| MS.gene28299.t1 | AT2G45400 | 30.675 | 326 | 214 | 8 | 5 | 319 | 40 | 364 | 4.76e-39 | 141 |
| MS.gene28299.t1 | AT2G23910 | 32.669 | 251 | 155 | 5 | 6 | 252 | 11 | 251 | 7.43e-39 | 139 |
| MS.gene28299.t1 | AT4G30470 | 31.746 | 252 | 163 | 4 | 2 | 252 | 7 | 250 | 2.95e-35 | 130 |
| MS.gene28299.t1 | AT1G68540 | 32.227 | 211 | 134 | 3 | 114 | 319 | 8 | 214 | 3.26e-35 | 127 |
| MS.gene28299.t1 | AT2G45400 | 30.357 | 280 | 184 | 7 | 5 | 274 | 40 | 318 | 1.92e-33 | 125 |
| MS.gene28299.t1 | AT2G23910 | 32.057 | 209 | 128 | 5 | 48 | 252 | 19 | 217 | 2.46e-28 | 110 |
| MS.gene28299.t1 | AT2G45400 | 28.477 | 302 | 203 | 8 | 27 | 319 | 10 | 307 | 3.36e-26 | 105 |
| MS.gene28299.t1 | AT2G45400 | 31.944 | 216 | 137 | 6 | 5 | 211 | 40 | 254 | 4.86e-25 | 101 |
| MS.gene28299.t1 | AT5G14700 | 29.582 | 311 | 190 | 11 | 5 | 295 | 55 | 356 | 1.27e-23 | 100 |
| MS.gene28299.t1 | AT5G14700 | 31.081 | 222 | 139 | 7 | 2 | 212 | 52 | 270 | 3.04e-17 | 80.9 |
Find 93 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAGCTTTGGCGCATATTT+TGG | 0.107026 | 3.1:-49617355 | MS.gene28299:CDS |
| ATAAATGCAGAAGCAAATTT+TGG | 0.164485 | 3.1:-49621184 | MS.gene28299:intron |
| TCAAAGAAGTTGATTGATTT+AGG | 0.165827 | 3.1:-49616728 | MS.gene28299:CDS |
| TACTTTGCCACATTATATTC+AGG | 0.287776 | 3.1:+49617240 | None:intergenic |
| CAAAGAAGTTGATTGATTTA+GGG | 0.297802 | 3.1:-49616727 | MS.gene28299:CDS |
| GCCATGCTTGAGTTAATTCT+TGG | 0.327496 | 3.1:+49617788 | None:intergenic |
| TCTGCTAGTGTCTTTGCAAT+GGG | 0.342685 | 3.1:+49617896 | None:intergenic |
| TCCTTGATAATTTCTTCTGC+TGG | 0.343039 | 3.1:+49616692 | None:intergenic |
| TTGACTTCACCGATGATGTT+AGG | 0.346694 | 3.1:+49621305 | None:intergenic |
| TTCTGCTAGTGTCTTTGCAA+TGG | 0.381819 | 3.1:+49617895 | None:intergenic |
| CTGGCCAGCTGATAAGATTA+AGG | 0.384312 | 3.1:-49621055 | MS.gene28299:CDS |
| CCAGCGGAGCCATCGGATCA+TGG | 0.386978 | 3.1:-49621692 | MS.gene28299:CDS |
| AGATTAAGGCAGAGGATTGT+TGG | 0.391069 | 3.1:-49621041 | MS.gene28299:CDS |
| TCAAGCATGGCTGTACTTGC+TGG | 0.420507 | 3.1:-49617776 | MS.gene28299:CDS |
| CCATGATCCGATGGCTCCGC+TGG | 0.430877 | 3.1:+49621692 | None:intergenic |
| TTGAAGGTGGCTAAGGAAGC+AGG | 0.431210 | 3.1:-49621132 | MS.gene28299:CDS |
| GACATATGAGGACTTCTTCA+TGG | 0.433121 | 3.1:-49617397 | MS.gene28299:CDS |
| TTCTTTGCTCTCAACAATCC+AGG | 0.442395 | 3.1:+49616755 | None:intergenic |
| TTTGAGCAAAAGAAAGCATC+TGG | 0.442607 | 3.1:-49617330 | MS.gene28299:CDS |
| TTAACCGTTCCTTGAATTGC+CGG | 0.448671 | 3.1:+49621159 | None:intergenic |
| ATAGTGGCTAACCAAGATCT+TGG | 0.454544 | 3.1:+49621622 | None:intergenic |
| CCAGCTAGGACTCGGTATAA+TGG | 0.455774 | 3.1:+49621074 | None:intergenic |
| GACAAAGCATTTAGAAGCAA+TGG | 0.459202 | 3.1:-49621432 | MS.gene28299:CDS |
| TTAATTCTTGGTGGAATCAA+AGG | 0.461807 | 3.1:+49617800 | None:intergenic |
| ATTAACCCTGGTACAGCATT+GGG | 0.467964 | 3.1:-49617824 | MS.gene28299:CDS |
| GGACGGTGTAGCCGCGTTCG+AGG | 0.468770 | 3.1:+49621655 | None:intergenic |
| TGGGAATTTGCTAAGGAGAC+TGG | 0.471676 | 3.1:-49617863 | MS.gene28299:CDS |
| AAAGGGCCCAATGCTGTACC+AGG | 0.472593 | 3.1:+49617818 | None:intergenic |
| CATGCCACTATCCAAGATCT+TGG | 0.473034 | 3.1:-49621633 | MS.gene28299:intron |
| GTGTTTGAAGAGTAGAGGTT+TGG | 0.480993 | 3.1:-49616660 | MS.gene28299:CDS |
| ACTTTGCCACATTATATTCA+GGG | 0.484954 | 3.1:+49617241 | None:intergenic |
| GTTGAGTGTTTGAAGAGTAG+AGG | 0.490243 | 3.1:-49616665 | MS.gene28299:CDS |
| AACGCCGGCACAACCTTTCA+CGG | 0.490466 | 3.1:+49621343 | None:intergenic |
| ATGCTTGAGTTAATTCTTGG+TGG | 0.500088 | 3.1:+49617791 | None:intergenic |
| TCCGATGGCTCCGCTGGCAC+CGG | 0.504784 | 3.1:+49621698 | None:intergenic |
| TGTAGCCGCGTTCGAGGAGG+AGG | 0.505144 | 3.1:+49621661 | None:intergenic |
| CCATTATACCGAGTCCTAGC+TGG | 0.505736 | 3.1:-49621074 | MS.gene28299:CDS |
| TCTATCGCGGCCGCCGTGAA+AGG | 0.506890 | 3.1:-49621356 | MS.gene28299:CDS |
| GGAAGCAGGGGTGGAGCGTG+TGG | 0.514670 | 3.1:-49621118 | MS.gene28299:CDS |
| GATTAACCCTGGTACAGCAT+TGG | 0.515872 | 3.1:-49617825 | MS.gene28299:CDS |
| ACCGGTGCCAGCGGAGCCAT+CGG | 0.516306 | 3.1:-49621699 | MS.gene28299:CDS |
| CAGCGGAGCCATCGGATCAT+GGG | 0.518564 | 3.1:-49621691 | MS.gene28299:CDS |
| GCCGCCGTGAAAGGTTGTGC+CGG | 0.519589 | 3.1:-49621347 | MS.gene28299:CDS |
| TGAGTATTGCAAGGAAAAGA+AGG | 0.523447 | 3.1:-49621010 | MS.gene28299:intron |
| AGCTGGTTGGGAATTTGCTA+AGG | 0.526723 | 3.1:-49617870 | MS.gene28299:CDS |
| ATCTTATCAGCTGGCCAGCT+AGG | 0.529728 | 3.1:+49621060 | None:intergenic |
| AGCAGGGGTGGAGCGTGTGG+TGG | 0.530266 | 3.1:-49621115 | MS.gene28299:CDS |
| AGCTGATAAGATTAAGGCAG+AGG | 0.531575 | 3.1:-49621049 | MS.gene28299:CDS |
| AGGAACGGTTAACGTGTTGA+AGG | 0.536664 | 3.1:-49621148 | MS.gene28299:CDS |
| TCAAAGTCAGTTTGTGTCAC+CGG | 0.536966 | 3.1:-49621717 | MS.gene28299:CDS |
| GGTGGCTAAGGAAGCAGGGG+TGG | 0.537366 | 3.1:-49621127 | MS.gene28299:CDS |
| TAATTCTTGGTGGAATCAAA+GGG | 0.538145 | 3.1:+49617801 | None:intergenic |
| TAACGTGTTGAAGGTGGCTA+AGG | 0.542412 | 3.1:-49621139 | MS.gene28299:CDS |
| TGAGGACTTCTTCATGGGAA+TGG | 0.545045 | 3.1:-49617391 | MS.gene28299:CDS |
| TCAGCTGGCCAGCTAGGACT+CGG | 0.545430 | 3.1:+49621066 | None:intergenic |
| ATCTTGGATAGTGGCATGGA+CGG | 0.550916 | 3.1:+49621638 | None:intergenic |
| GTACTTGCTGGTGTTCTCAA+AGG | 0.557883 | 3.1:-49617764 | MS.gene28299:intron |
| TCCAGCAGAAGAAATTATCA+AGG | 0.558321 | 3.1:-49616693 | MS.gene28299:CDS |
| TCTGCCTTAATCTTATCAGC+TGG | 0.568032 | 3.1:+49621051 | None:intergenic |
| ATACCGACGGATACTCAACC+TGG | 0.573524 | 3.1:-49616773 | MS.gene28299:CDS |
| CTAACCAAGATCTTGGATAG+TGG | 0.575145 | 3.1:+49621629 | None:intergenic |
| GTTTGTGTCACCGGTGCCAG+CGG | 0.578206 | 3.1:-49621708 | MS.gene28299:CDS |
| ACATATGAGGACTTCTTCAT+GGG | 0.583739 | 3.1:-49617396 | MS.gene28299:CDS |
| GGAACCGGCAATTCAAGGAA+CGG | 0.586602 | 3.1:-49621163 | MS.gene28299:CDS |
| GACACAAACTGACTTTGACA+TGG | 0.589619 | 3.1:+49621722 | None:intergenic |
| GCGAACCACCCATGATCCGA+TGG | 0.590987 | 3.1:+49621683 | None:intergenic |
| GACGGACCTTGAGTATTGCA+AGG | 0.594503 | 3.1:-49621019 | MS.gene28299:CDS |
| TGAAGGTGGCTAAGGAAGCA+GGG | 0.599054 | 3.1:-49621131 | MS.gene28299:CDS |
| TCTTAACAGCGACTCTATCG+CGG | 0.604006 | 3.1:-49621369 | MS.gene28299:CDS |
| CAAGATCTTGGATAGTGGCA+TGG | 0.604987 | 3.1:+49621634 | None:intergenic |
| AGGTGACAAAGAGACATATG+AGG | 0.610441 | 3.1:-49617409 | MS.gene28299:CDS |
| CGGAGCCATCGGATCATGGG+TGG | 0.610944 | 3.1:-49621688 | MS.gene28299:CDS |
| CTGCTAGTGTCTTTGCAATG+GGG | 0.611325 | 3.1:+49617897 | None:intergenic |
| CTTGCATGTCCTAACATCAT+CGG | 0.615491 | 3.1:-49621314 | MS.gene28299:CDS |
| AGCAAAAGAAAGCATCTGGA+AGG | 0.619285 | 3.1:-49617326 | MS.gene28299:CDS |
| ACCAAGAATTAACTCAAGCA+TGG | 0.623084 | 3.1:-49617789 | MS.gene28299:CDS |
| TAAGGCAGAGGATTGTTGGA+CGG | 0.625388 | 3.1:-49621037 | MS.gene28299:CDS |
| GTTATACCCTGAATATAATG+TGG | 0.634043 | 3.1:-49617247 | MS.gene28299:CDS |
| AACGGTTAACGTGTTGAAGG+TGG | 0.640545 | 3.1:-49621145 | MS.gene28299:CDS |
| CGGTGTAGCCGCGTTCGAGG+AGG | 0.648737 | 3.1:+49621658 | None:intergenic |
| CGATGATGTTAGGACATGCA+AGG | 0.649220 | 3.1:+49621315 | None:intergenic |
| GTTCGCCTCCTCCTCGAACG+CGG | 0.652562 | 3.1:-49621666 | MS.gene28299:CDS |
| TAATTATTATAGGATACCGA+CGG | 0.657416 | 3.1:-49616786 | MS.gene28299:intron |
| AAGCATTTAGAAGCAATGGA+AGG | 0.658324 | 3.1:-49621428 | MS.gene28299:CDS |
| GATGTGGTGATGATTAACCC+TGG | 0.670169 | 3.1:-49617836 | MS.gene28299:CDS |
| ACATGCAAGGTGTATAACGC+CGG | 0.674006 | 3.1:+49621328 | None:intergenic |
| AATCCAGGTTGAGTATCCGT+CGG | 0.675345 | 3.1:+49616770 | None:intergenic |
| GAAGGTGGCTAAGGAAGCAG+GGG | 0.676782 | 3.1:-49621130 | MS.gene28299:CDS |
| ATCTGGAAGGCATTTGTGTG+TGG | 0.681001 | 3.1:-49617313 | MS.gene28299:CDS |
| CGGTGAAGTCAAAGACCCCG+AGG | 0.705107 | 3.1:-49621294 | MS.gene28299:intron |
| AAGGGCCCAATGCTGTACCA+GGG | 0.707459 | 3.1:+49617819 | None:intergenic |
| GCTAGGACTCGGTATAATGG+CGG | 0.711217 | 3.1:+49621077 | None:intergenic |
| GCCGGCACAACCTTTCACGG+CGG | 0.757026 | 3.1:+49621346 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATATATTTATTTTTTT+TGG | + | chr3.1:49621318-49621337 | None:intergenic | 0.0% |
| !!! | ATTTAAAATATATATTTTAT+CGG | + | chr3.1:49619312-49619331 | None:intergenic | 0.0% |
| !! | CAAAAGAAATAAAAATATTT+AGG | + | chr3.1:49617979-49617998 | None:intergenic | 10.0% |
| !! | CTAAAAATTAAATGAAAATT+TGG | + | chr3.1:49620385-49620404 | None:intergenic | 10.0% |
| !! | TTAATAATAAAACTTTAATG+TGG | + | chr3.1:49620740-49620759 | None:intergenic | 10.0% |
| !!! | CAAATTAAATATTATGATTT+TGG | + | chr3.1:49619146-49619165 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTATATCAATAG+TGG | + | chr3.1:49617705-49617724 | None:intergenic | 10.0% |
| !!! | TTTTCATAATAATATGAAAA+AGG | - | chr3.1:49617426-49617445 | MS.gene28299:intron | 10.0% |
| !! | ATCATAATCATATATAAGAT+CGG | + | chr3.1:49620837-49620856 | None:intergenic | 15.0% |
| !! | TAAAAAATATAAAATCTCGA+TGG | - | chr3.1:49619777-49619796 | MS.gene28299:intron | 15.0% |
| !! | TAGTGAGTAAATTAAATAAA+AGG | - | chr3.1:49621556-49621575 | MS.gene28299:intron | 15.0% |
| !! | TTAAAGTTGAATATTAATGT+AGG | + | chr3.1:49621233-49621252 | None:intergenic | 15.0% |
| !! | TTATGTAATTATTAATTTCC+AGG | + | chr3.1:49619625-49619644 | None:intergenic | 15.0% |
| !!! | ACACGAAATTTTTAAAATTT+AGG | - | chr3.1:49618829-49618848 | MS.gene28299:intron | 15.0% |
| !!! | AGTTATTGACAAATATTTTT+TGG | - | chr3.1:49618402-49618421 | MS.gene28299:intron | 15.0% |
| !!! | ATTAAATATTATGATTTTGG+TGG | + | chr3.1:49619143-49619162 | None:intergenic | 15.0% |
| !!! | GTTATTGACAAATATTTTTT+GGG | - | chr3.1:49618403-49618422 | MS.gene28299:intron | 15.0% |
| !!! | GTTTTTTTTAAGTATTTTAC+AGG | + | chr3.1:49618907-49618926 | None:intergenic | 15.0% |
| !!! | TATTTCAAACAAGATTTTTA+TGG | + | chr3.1:49617597-49617616 | None:intergenic | 15.0% |
| !!! | TGTTTGAAATATTTATCATT+AGG | - | chr3.1:49617606-49617625 | MS.gene28299:intron | 15.0% |
| !!! | TTTATACACTTCATTTTTTT+TGG | - | chr3.1:49619224-49619243 | MS.gene28299:intron | 15.0% |
| !!! | TTTTGTTTTCTAAAACATTT+TGG | - | chr3.1:49619540-49619559 | MS.gene28299:intron | 15.0% |
| !! | AAACCTAAATATAAAGGTTA+TGG | - | chr3.1:49618032-49618051 | MS.gene28299:intron | 20.0% |
| !! | AAATAAAAAAGAATTAGGCT+AGG | + | chr3.1:49618182-49618201 | None:intergenic | 20.0% |
| !! | AAATATTTATCATTAGGAGT+AGG | - | chr3.1:49617612-49617631 | MS.gene28299:intron | 20.0% |
| !! | AACGCCAAAATTAATTAATA+TGG | + | chr3.1:49617163-49617182 | None:intergenic | 20.0% |
| !! | AATAAGAAAATTGTCAATGA+AGG | - | chr3.1:49619979-49619998 | MS.gene28299:intron | 20.0% |
| !! | AATTGCTTAAACAATGTATA+AGG | - | chr3.1:49619672-49619691 | MS.gene28299:intron | 20.0% |
| !! | ATATTTGTGTAAAATGTCAA+AGG | + | chr3.1:49619757-49619776 | None:intergenic | 20.0% |
| !! | ATTGCTTAAACAATGTATAA+GGG | - | chr3.1:49619673-49619692 | MS.gene28299:intron | 20.0% |
| !! | ATTGTGCGTTTAATTATTAT+AGG | - | chr3.1:49621579-49621598 | MS.gene28299:intron | 20.0% |
| !! | ATTGTTTAAGCAATTAAAAG+AGG | + | chr3.1:49619667-49619686 | None:intergenic | 20.0% |
| !! | CAATGACAAAATAATTGATA+AGG | - | chr3.1:49620425-49620444 | MS.gene28299:intron | 20.0% |
| !! | CATTTATAAATCCAAAATAG+AGG | + | chr3.1:49618518-49618537 | None:intergenic | 20.0% |
| !! | CGAAATAAACATTATACATA+TGG | + | chr3.1:49620214-49620233 | None:intergenic | 20.0% |
| !! | TATGTTAGTGAAATTAAACT+AGG | + | chr3.1:49618253-49618272 | None:intergenic | 20.0% |
| !! | TATTCATTTATTATTATGCG+AGG | + | chr3.1:49616812-49616831 | None:intergenic | 20.0% |
| !! | TATTTGTGTAAAATGTCAAA+GGG | + | chr3.1:49619756-49619775 | None:intergenic | 20.0% |
| !! | TTAATCATAAATCCTTCAAA+AGG | + | chr3.1:49617454-49617473 | None:intergenic | 20.0% |
| !! | TTTGTATTCATTAAGATTAG+AGG | + | chr3.1:49620700-49620719 | None:intergenic | 20.0% |
| !!! | AACTTTAGAGACTAATAAAA+AGG | + | chr3.1:49617680-49617699 | None:intergenic | 20.0% |
| !!! | ACTTTAGAGACTAATAAAAA+GGG | + | chr3.1:49617679-49617698 | None:intergenic | 20.0% |
| !!! | CTTATCAATTATTTTGTCAT+TGG | + | chr3.1:49620427-49620446 | None:intergenic | 20.0% |
| !!! | GAATGTTTAAGGTTTAAATT+TGG | - | chr3.1:49620659-49620678 | MS.gene28299:intron | 20.0% |
| !!! | TCTATTTTCATTCATATGTT+AGG | - | chr3.1:49619030-49619049 | MS.gene28299:intron | 20.0% |
| !!! | TGGTCCATATTAATTAATTT+TGG | - | chr3.1:49617156-49617175 | MS.gene28299:intron | 20.0% |
| !!! | TGTTGATTATAAGTTATTGT+TGG | - | chr3.1:49617893-49617912 | MS.gene28299:CDS | 20.0% |
| !!! | TTAAAATTTAGGATACGATA+CGG | - | chr3.1:49618840-49618859 | MS.gene28299:intron | 20.0% |
| !!! | TTAGATCTTTAAAATGTGTT+TGG | - | chr3.1:49617552-49617571 | MS.gene28299:intron | 20.0% |
| !!! | TTTCTTTTGAGAAAATTGTA+TGG | - | chr3.1:49617990-49618009 | MS.gene28299:intron | 20.0% |
| ! | AACCTCATGATTTAATAATG+AGG | + | chr3.1:49620088-49620107 | None:intergenic | 25.0% |
| ! | AAGTGAAACATCATTTAAAG+AGG | - | chr3.1:49619936-49619955 | MS.gene28299:intron | 25.0% |
| ! | ATAAACGAAAGATATCCAAA+AGG | - | chr3.1:49619722-49619741 | MS.gene28299:intron | 25.0% |
| ! | ATAAGGTTTACATTATGTTG+TGG | - | chr3.1:49620442-49620461 | MS.gene28299:intron | 25.0% |
| ! | ATAATTAATTCCGATACTTC+TGG | - | chr3.1:49619336-49619355 | MS.gene28299:intron | 25.0% |
| ! | ATGAACAATGAAAGAATGAA+AGG | - | chr3.1:49618535-49618554 | MS.gene28299:intron | 25.0% |
| ! | ATGTATAAAAACACATGTTC+TGG | + | chr3.1:49617956-49617975 | None:intergenic | 25.0% |
| ! | CAAAATAAGTAATTCTATCC+TGG | - | chr3.1:49619604-49619623 | MS.gene28299:intron | 25.0% |
| ! | CTTATAAGTTATAACCGATT+TGG | - | chr3.1:49621526-49621545 | MS.gene28299:intron | 25.0% |
| ! | GTAAATTATATTCCAACATG+TGG | + | chr3.1:49620362-49620381 | None:intergenic | 25.0% |
| ! | TAAACGAAAGATATCCAAAA+GGG | - | chr3.1:49619723-49619742 | MS.gene28299:intron | 25.0% |
| ! | TAACTTATAAGCCTTAGATT+TGG | + | chr3.1:49621517-49621536 | None:intergenic | 25.0% |
| ! | TAAGGTTTACATTATGTTGT+GGG | - | chr3.1:49620443-49620462 | MS.gene28299:intron | 25.0% |
| ! | TAATTAATTCCGATACTTCT+GGG | - | chr3.1:49619337-49619356 | MS.gene28299:intron | 25.0% |
| ! | TAATTATTATAGGATACCGA+CGG | - | chr3.1:49621589-49621608 | MS.gene28299:intron | 25.0% |
| ! | TATTTGGACCTTCTTATTAT+AGG | - | chr3.1:49620946-49620965 | MS.gene28299:intron | 25.0% |
| ! | TCTACAATTCTTAATAGTGT+AGG | + | chr3.1:49618310-49618329 | None:intergenic | 25.0% |
| ! | TGAACAATGAAAGAATGAAA+GGG | - | chr3.1:49618536-49618555 | MS.gene28299:intron | 25.0% |
| ! | TGTCCATAACCTTTATATTT+AGG | + | chr3.1:49618038-49618057 | None:intergenic | 25.0% |
| !! | ATAAATGCAGAAGCAAATTT+TGG | - | chr3.1:49617191-49617210 | MS.gene28299:intron | 25.0% |
| !! | CAAAGAAGTTGATTGATTTA+GGG | - | chr3.1:49621648-49621667 | MS.gene28299:CDS | 25.0% |
| !! | CTATAGTGATTTTGTGAATT+TGG | - | chr3.1:49621098-49621117 | MS.gene28299:CDS | 25.0% |
| !! | CTCACTAATTTTTACCAAAT+CGG | + | chr3.1:49621543-49621562 | None:intergenic | 25.0% |
| !! | GTAATTTTTGAATCTTCAAG+AGG | - | chr3.1:49617817-49617836 | MS.gene28299:CDS | 25.0% |
| !! | TCAAAGAAGTTGATTGATTT+AGG | - | chr3.1:49621647-49621666 | MS.gene28299:CDS | 25.0% |
| !! | TTGCATAGTTCAATTTTATG+TGG | - | chr3.1:49617136-49617155 | MS.gene28299:intron | 25.0% |
| !! | TTTTATAAGCTACTAGAATG+AGG | - | chr3.1:49620923-49620942 | MS.gene28299:intron | 25.0% |
| !!! | AATAAATTGTTTTGGAACCT+CGG | + | chr3.1:49617101-49617120 | None:intergenic | 25.0% |
| !!! | CATGATGATGAATTCATTTT+GGG | - | chr3.1:49618602-49618621 | MS.gene28299:intron | 25.0% |
| !!! | TCATTTTAAAGACATAGCTT+TGG | - | chr3.1:49621008-49621027 | MS.gene28299:intron | 25.0% |
| !!! | TCGTCTCAAATTTTTTGAAA+TGG | - | chr3.1:49616979-49616998 | MS.gene28299:intron | 25.0% |
| !!! | TTTGTTGTTTGTTTTTTGTG+TGG | + | chr3.1:49618689-49618708 | None:intergenic | 25.0% |
| AAAGTTTAACCTTTCACATC+AGG | + | chr3.1:49620323-49620342 | None:intergenic | 30.0% | |
| AAGTTTAACCTTTCACATCA+GGG | + | chr3.1:49620322-49620341 | None:intergenic | 30.0% | |
| AATAATTCATCACCACATGT+TGG | - | chr3.1:49620347-49620366 | MS.gene28299:intron | 30.0% | |
| ACTTTGCCACATTATATTCA+GGG | + | chr3.1:49621137-49621156 | None:intergenic | 30.0% | |
| ATGAGAGTCATATCATTTGA+AGG | + | chr3.1:49619456-49619475 | None:intergenic | 30.0% | |
| CTTGTGCAATATACATATAG+TGG | + | chr3.1:49616772-49616791 | None:intergenic | 30.0% | |
| CTTTGTCACCTATAATAAGA+AGG | + | chr3.1:49620957-49620976 | None:intergenic | 30.0% | |
| GACCTCATTATTAAATCATG+AGG | - | chr3.1:49620083-49620102 | MS.gene28299:intron | 30.0% | |
| GAGGAATAGAGATCAATTTA+TGG | - | chr3.1:49617744-49617763 | MS.gene28299:intron | 30.0% | |
| GATACTTAAAAGATACTCGA+CGG | + | chr3.1:49619290-49619309 | None:intergenic | 30.0% | |
| GGTACACCATCAATAAAATT+GGG | + | chr3.1:49620301-49620320 | None:intergenic | 30.0% | |
| GGTCACAAACCTAAATATAA+AGG | - | chr3.1:49618026-49618045 | MS.gene28299:intron | 30.0% | |
| GTACACCATCAATAAAATTG+GGG | + | chr3.1:49620300-49620319 | None:intergenic | 30.0% | |
| GTTATACCCTGAATATAATG+TGG | - | chr3.1:49621128-49621147 | MS.gene28299:CDS | 30.0% | |
| GTTTGTGACCAAATAAGAAT+TGG | + | chr3.1:49618016-49618035 | None:intergenic | 30.0% | |
| TAATTCTTGGTGGAATCAAA+GGG | + | chr3.1:49620577-49620596 | None:intergenic | 30.0% | |
| TACTTTGCCACATTATATTC+AGG | + | chr3.1:49621138-49621157 | None:intergenic | 30.0% | |
| TATTTATCATTAGGAGTAGG+AGG | - | chr3.1:49617615-49617634 | MS.gene28299:intron | 30.0% | |
| TCTAATGATCAACACTTGTT+TGG | + | chr3.1:49618215-49618234 | None:intergenic | 30.0% | |
| TTAATTCTTGGTGGAATCAA+AGG | + | chr3.1:49620578-49620597 | None:intergenic | 30.0% | |
| TTGTAGAATGTCCAAATCTA+AGG | - | chr3.1:49621503-49621522 | MS.gene28299:intron | 30.0% | |
| TTGTATCAATCACACAATAG+AGG | + | chr3.1:49618350-49618369 | None:intergenic | 30.0% | |
| TTGTATGGCCAATTCTTATT+TGG | - | chr3.1:49618005-49618024 | MS.gene28299:intron | 30.0% | |
| TTGTGACACATAATTTACAG+AGG | - | chr3.1:49616910-49616929 | MS.gene28299:intron | 30.0% | |
| ! | AAAAGCCCCAATTTTATTGA+TGG | - | chr3.1:49620292-49620311 | MS.gene28299:intron | 30.0% |
| ! | AGCGTTTGATTTCTCTTATA+TGG | + | chr3.1:49619897-49619916 | None:intergenic | 30.0% |
| ! | ATGAAAAAGGATCCTTTTGA+AGG | - | chr3.1:49617439-49617458 | MS.gene28299:intron | 30.0% |
| ! | TGATTTTGTGAATTTGGTTG+CGG | - | chr3.1:49621104-49621123 | MS.gene28299:CDS | 30.0% |
| !! | GATCTTTAAAATGTGTTTGG+TGG | - | chr3.1:49617555-49617574 | MS.gene28299:intron | 30.0% |
| !! | GCATGATGATGAATTCATTT+TGG | - | chr3.1:49618601-49618620 | MS.gene28299:intron | 30.0% |
| !!! | ATAAATTGTTTTGGAACCTC+GGG | + | chr3.1:49617100-49617119 | None:intergenic | 30.0% |
| !!! | TTTGTTTTTTGTGTGGCATA+TGG | + | chr3.1:49618682-49618701 | None:intergenic | 30.0% |
| AAAATAAAGTTCACCCCTAG+TGG | - | chr3.1:49617717-49617736 | MS.gene28299:intron | 35.0% | |
| AAGACGAACTTAAGACTGTA+GGG | + | chr3.1:49620177-49620196 | None:intergenic | 35.0% | |
| AAGCATTTAGAAGCAATGGA+AGG | - | chr3.1:49616947-49616966 | MS.gene28299:intron | 35.0% | |
| ACATATGAGGACTTCTTCAT+GGG | - | chr3.1:49620979-49620998 | MS.gene28299:intron | 35.0% | |
| ACCAAGAATTAACTCAAGCA+TGG | - | chr3.1:49620586-49620605 | MS.gene28299:intron | 35.0% | |
| AGTCTTAAGTTCGTCTTCTA+TGG | - | chr3.1:49620180-49620199 | MS.gene28299:intron | 35.0% | |
| ATCAATGTGACTTTGAGTGT+GGG | + | chr3.1:49617791-49617810 | None:intergenic | 35.0% | |
| ATGCTTGAGTTAATTCTTGG+TGG | + | chr3.1:49620587-49620606 | None:intergenic | 35.0% | |
| GGGTACACCATCAATAAAAT+TGG | + | chr3.1:49620302-49620321 | None:intergenic | 35.0% | |
| TCCAGCAGAAGAAATTATCA+AGG | - | chr3.1:49621682-49621701 | MS.gene28299:CDS | 35.0% | |
| TGATTATGATACGTTGACAC+TGG | - | chr3.1:49620847-49620866 | MS.gene28299:intron | 35.0% | |
| ! | AGCTACTAGAATGAGGTATT+TGG | - | chr3.1:49620930-49620949 | MS.gene28299:intron | 35.0% |
| ! | GACAAAGCATTTAGAAGCAA+TGG | - | chr3.1:49616943-49616962 | MS.gene28299:intron | 35.0% |
| ! | TCCTTGATAATTTCTTCTGC+TGG | + | chr3.1:49621686-49621705 | None:intergenic | 35.0% |
| ! | TCTTTTCCTTGCAATACTCA+AGG | + | chr3.1:49617365-49617384 | None:intergenic | 35.0% |
| ! | TGAGTATTGCAAGGAAAAGA+AGG | - | chr3.1:49617365-49617384 | MS.gene28299:CDS | 35.0% |
| !! | TAGCGAGACACTTTTTGTAA+AGG | + | chr3.1:49617857-49617876 | None:intergenic | 35.0% |
| !! | TTTGAGCAAAAGAAAGCATC+TGG | - | chr3.1:49621045-49621064 | MS.gene28299:CDS | 35.0% |
| !!! | ATAGCTTTGGCGCATATTTT+GGG | - | chr3.1:49621021-49621040 | MS.gene28299:CDS | 35.0% |
| !!! | ATGAATTCATTTTGGGACAC+TGG | - | chr3.1:49618609-49618628 | MS.gene28299:intron | 35.0% |
| !!! | ATTGGGGCTTTTATTTTCAG+AGG | + | chr3.1:49620284-49620303 | None:intergenic | 35.0% |
| !!! | GCTTTTATTTTCAGAGGAGT+TGG | + | chr3.1:49620278-49620297 | None:intergenic | 35.0% |
| !!! | TAAATTGTTTTGGAACCTCG+GGG | + | chr3.1:49617099-49617118 | None:intergenic | 35.0% |
| !!! | TTTTTTGTGTGGCATATGGT+TGG | + | chr3.1:49618678-49618697 | None:intergenic | 35.0% |
| AAGACACTAGCAGAAAAAGC+TGG | - | chr3.1:49620488-49620507 | MS.gene28299:intron | 40.0% | |
| ACAACTTCTTCACAATGCAG+TGG | - | chr3.1:49621401-49621420 | MS.gene28299:CDS | 40.0% | |
| ACTAGCAGAAAAAGCTGGTT+GGG | - | chr3.1:49620493-49620512 | MS.gene28299:intron | 40.0% | |
| AGATTAAGGCAGAGGATTGT+TGG | - | chr3.1:49617334-49617353 | MS.gene28299:CDS | 40.0% | |
| AGCTGATAAGATTAAGGCAG+AGG | - | chr3.1:49617326-49617345 | MS.gene28299:CDS | 40.0% | |
| AGGTGACAAAGAGACATATG+AGG | - | chr3.1:49620966-49620985 | MS.gene28299:intron | 40.0% | |
| ATAGTGGCTAACCAAGATCT+TGG | + | chr3.1:49616756-49616775 | None:intergenic | 40.0% | |
| ATGTTGAACTCATGATCTCG+TGG | + | chr3.1:49620041-49620060 | None:intergenic | 40.0% | |
| ATTAACCCTGGTACAGCATT+GGG | - | chr3.1:49620551-49620570 | MS.gene28299:intron | 40.0% | |
| CATATGGTTGGATATAGGGA+GGG | + | chr3.1:49618666-49618685 | None:intergenic | 40.0% | |
| CATCAATGTGACTTTGAGTG+TGG | + | chr3.1:49617792-49617811 | None:intergenic | 40.0% | |
| CTAACCAAGATCTTGGATAG+TGG | + | chr3.1:49616749-49616768 | None:intergenic | 40.0% | |
| CTTGCATGTCCTAACATCAT+CGG | - | chr3.1:49617061-49617080 | MS.gene28299:intron | 40.0% | |
| GAAGACGAACTTAAGACTGT+AGG | + | chr3.1:49620178-49620197 | None:intergenic | 40.0% | |
| GACATATGAGGACTTCTTCA+TGG | - | chr3.1:49620978-49620997 | MS.gene28299:intron | 40.0% | |
| GCCATGCTTGAGTTAATTCT+TGG | + | chr3.1:49620590-49620609 | None:intergenic | 40.0% | |
| GCTTAAATGTCAAGCAGCTA+AGG | + | chr3.1:49620815-49620834 | None:intergenic | 40.0% | |
| GTGGCATATGGTTGGATATA+GGG | + | chr3.1:49618670-49618689 | None:intergenic | 40.0% | |
| GTGTTTGAAGAGTAGAGGTT+TGG | - | chr3.1:49621715-49621734 | MS.gene28299:CDS | 40.0% | |
| GTTGAGTGTTTGAAGAGTAG+AGG | - | chr3.1:49621710-49621729 | MS.gene28299:CDS | 40.0% | |
| TCAAAGTCAGTTTGTGTCAC+CGG | - | chr3.1:49616658-49616677 | MS.gene28299:CDS | 40.0% | |
| TCTATTCCTCCTTTCCACTA+GGG | + | chr3.1:49617734-49617753 | None:intergenic | 40.0% | |
| TCTGCCTTAATCTTATCAGC+TGG | + | chr3.1:49617327-49617346 | None:intergenic | 40.0% | |
| TCTGCTAGTGTCTTTGCAAT+GGG | + | chr3.1:49620482-49620501 | None:intergenic | 40.0% | |
| TGGATGAAAGTAACGAGAGA+GGG | + | chr3.1:49619123-49619142 | None:intergenic | 40.0% | |
| TGTGGCATATGGTTGGATAT+AGG | + | chr3.1:49618671-49618690 | None:intergenic | 40.0% | |
| TTAACCGTTCCTTGAATTGC+CGG | + | chr3.1:49617219-49617238 | None:intergenic | 40.0% | |
| TTCTGCTAGTGTCTTTGCAA+TGG | + | chr3.1:49620483-49620502 | None:intergenic | 40.0% | |
| TTCTTTGCTCTCAACAATCC+AGG | + | chr3.1:49621623-49621642 | None:intergenic | 40.0% | |
| TTGACTTCACCGATGATGTT+AGG | + | chr3.1:49617073-49617092 | None:intergenic | 40.0% | |
| TTGCAATGGGGTAGTATAAC+TGG | + | chr3.1:49620469-49620488 | None:intergenic | 40.0% | |
| ! | ACACTACGTGTCCTCTATTT+TGG | - | chr3.1:49618504-49618523 | MS.gene28299:intron | 40.0% |
| ! | ATACCGTATCCCAGAAGTAT+CGG | + | chr3.1:49619349-49619368 | None:intergenic | 40.0% |
| !! | AGCAAAAGAAAGCATCTGGA+AGG | - | chr3.1:49621049-49621068 | MS.gene28299:CDS | 40.0% |
| !! | ATTCCGATACTTCTGGGATA+CGG | - | chr3.1:49619343-49619362 | MS.gene28299:intron | 40.0% |
| !!! | ATTTTGGAACCGGCAATTCA+AGG | - | chr3.1:49617207-49617226 | MS.gene28299:intron | 40.0% |
| !!! | CATAGCTTTGGCGCATATTT+TGG | - | chr3.1:49621020-49621039 | MS.gene28299:CDS | 40.0% |
| !!! | GCAGAAGCAAATTTTGGAAC+CGG | - | chr3.1:49617197-49617216 | MS.gene28299:intron | 40.0% |
| !!! | TAAGGAGACTGGTTTTGATG+TGG | - | chr3.1:49620523-49620542 | MS.gene28299:intron | 40.0% |
| AAAGTTCACCCCTAGTGGAA+AGG | - | chr3.1:49617722-49617741 | MS.gene28299:intron | 45.0% | |
| AAATGTCAAGCAGCTAAGGC+AGG | + | chr3.1:49620811-49620830 | None:intergenic | 45.0% | |
| AACGGTTAACGTGTTGAAGG+TGG | - | chr3.1:49617230-49617249 | MS.gene28299:intron | 45.0% | |
| AATGTCAAGCAGCTAAGGCA+GGG | + | chr3.1:49620810-49620829 | None:intergenic | 45.0% | |
| ACATGCAAGGTGTATAACGC+CGG | + | chr3.1:49617050-49617069 | None:intergenic | 45.0% | |
| ACTCATGATCTCGTGGTTTG+TGG | + | chr3.1:49620034-49620053 | None:intergenic | 45.0% | |
| AGGAACGGTTAACGTGTTGA+AGG | - | chr3.1:49617227-49617246 | MS.gene28299:intron | 45.0% | |
| ATACGGGTACGATACGATAC+GGG | - | chr3.1:49618797-49618816 | MS.gene28299:intron | 45.0% | |
| ATCGTTCGTCAAACGTACCT+TGG | + | chr3.1:49616885-49616904 | None:intergenic | 45.0% | |
| ATGGTGTACCCTGATGTGAA+AGG | - | chr3.1:49620311-49620330 | MS.gene28299:intron | 45.0% | |
| CACTAGCAGAAAAAGCTGGT+TGG | - | chr3.1:49620492-49620511 | MS.gene28299:intron | 45.0% | |
| CATGCCACTATCCAAGATCT+TGG | - | chr3.1:49616742-49616761 | MS.gene28299:CDS | 45.0% | |
| CGATGATGTTAGGACATGCA+AGG | + | chr3.1:49617063-49617082 | None:intergenic | 45.0% | |
| CTATTCCTCCTTTCCACTAG+GGG | + | chr3.1:49617733-49617752 | None:intergenic | 45.0% | |
| CTCTATTCCTCCTTTCCACT+AGG | + | chr3.1:49617735-49617754 | None:intergenic | 45.0% | |
| CTGCTAGTGTCTTTGCAATG+GGG | + | chr3.1:49620481-49620500 | None:intergenic | 45.0% | |
| CTGGCCAGCTGATAAGATTA+AGG | - | chr3.1:49617320-49617339 | MS.gene28299:CDS | 45.0% | |
| GATACGGGTACGATACGATA+CGG | - | chr3.1:49618796-49618815 | MS.gene28299:intron | 45.0% | |
| GATTAACCCTGGTACAGCAT+TGG | - | chr3.1:49620550-49620569 | MS.gene28299:intron | 45.0% | |
| GCATATGGTTGGATATAGGG+AGG | + | chr3.1:49618667-49618686 | None:intergenic | 45.0% | |
| GGATGAAAGTAACGAGAGAG+GGG | + | chr3.1:49619122-49619141 | None:intergenic | 45.0% | |
| GTGGATGAAAGTAACGAGAG+AGG | + | chr3.1:49619124-49619143 | None:intergenic | 45.0% | |
| TAACGTGTTGAAGGTGGCTA+AGG | - | chr3.1:49617236-49617255 | MS.gene28299:intron | 45.0% | |
| TAAGGCAGAGGATTGTTGGA+CGG | - | chr3.1:49617338-49617357 | MS.gene28299:CDS | 45.0% | |
| TATCCGATACGTATCCGACA+CGG | - | chr3.1:49619392-49619411 | MS.gene28299:intron | 45.0% | |
| TCTTAACAGCGACTCTATCG+CGG | - | chr3.1:49617006-49617025 | MS.gene28299:intron | 45.0% | |
| TGAGGACTTCTTCATGGGAA+TGG | - | chr3.1:49620984-49621003 | MS.gene28299:intron | 45.0% | |
| TTGAAGGAACCTATGAAGCC+CGG | + | chr3.1:49619440-49619459 | None:intergenic | 45.0% | |
| ! | AATCCAGGTTGAGTATCCGT+CGG | + | chr3.1:49621608-49621627 | None:intergenic | 45.0% |
| ! | ATCTTGGATAGTGGCATGGA+CGG | + | chr3.1:49616740-49616759 | None:intergenic | 45.0% |
| ! | CAAGATCTTGGATAGTGGCA+TGG | + | chr3.1:49616744-49616763 | None:intergenic | 45.0% |
| ! | CTCATGATCTCGTGGTTTGT+GGG | + | chr3.1:49620033-49620052 | None:intergenic | 45.0% |
| ! | GATGTGGTGATGATTAACCC+TGG | - | chr3.1:49620539-49620558 | MS.gene28299:intron | 45.0% |
| ! | GTACTTGCTGGTGTTCTCAA+AGG | - | chr3.1:49620611-49620630 | MS.gene28299:intron | 45.0% |
| !! | AGCTGGTTGGGAATTTGCTA+AGG | - | chr3.1:49620505-49620524 | MS.gene28299:intron | 45.0% |
| !! | ATCTGGAAGGCATTTGTGTG+TGG | - | chr3.1:49621062-49621081 | MS.gene28299:CDS | 45.0% |
| !! | TACTTCTGGGATACGGTATC+CGG | - | chr3.1:49619350-49619369 | MS.gene28299:intron | 45.0% |
| !! | TGGGAATTTGCTAAGGAGAC+TGG | - | chr3.1:49620512-49620531 | MS.gene28299:intron | 45.0% |
| !!! | CGACACCATTTTGGAGTATC+CGG | - | chr3.1:49619418-49619437 | MS.gene28299:intron | 45.0% |
| !!! | GACACCATTTTGGAGTATCC+GGG | - | chr3.1:49619419-49619438 | MS.gene28299:intron | 45.0% |
| !! | AATTTAAATAAAAAAGAATT+AGG | + | chr3.1:49618187-49618206 | None:intergenic | 5.0% |
| !! | TAAAAATTAAATGAAAATTT+GGG | + | chr3.1:49620384-49620403 | None:intergenic | 5.0% |
| !!! | AAAATATTAATAAATTGTTT+TGG | + | chr3.1:49617109-49617128 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAAATTTTTTTTG+AGG | - | chr3.1:49620777-49620796 | MS.gene28299:intron | 5.0% |
| ACTACGTATCCGGGCTTCAT+AGG | + | chr3.1:49618774-49618793 | None:intergenic | 50.0% | |
| AGAGCTCATCGGGCAACTAA+AGG | + | chr3.1:49618574-49618593 | None:intergenic | 50.0% | |
| ATACCGACGGATACTCAACC+TGG | - | chr3.1:49621602-49621621 | MS.gene28299:intron | 50.0% | |
| ATCCGATACGTATCCGACAC+GGG | - | chr3.1:49619393-49619412 | MS.gene28299:intron | 50.0% | |
| ATCTTATCAGCTGGCCAGCT+AGG | + | chr3.1:49617318-49617337 | None:intergenic | 50.0% | |
| ATGCAACGCGTAGAGCTCAT+CGG | + | chr3.1:49618585-49618604 | None:intergenic | 50.0% | |
| CAAACACAACGCATGCACCA+AGG | - | chr3.1:49616865-49616884 | MS.gene28299:intron | 50.0% | |
| CACAATGCAGTGGACGTTAG+AGG | + | chr3.1:49621477-49621496 | None:intergenic | 50.0% | |
| CCATTATACCGAGTCCTAGC+TGG | - | chr3.1:49617301-49617320 | MS.gene28299:CDS | 50.0% | |
| GAAGCCCGGATACTCCAAAA+TGG | + | chr3.1:49619426-49619445 | None:intergenic | 50.0% | |
| GAGTTCCTTCCTATGAAGCC+CGG | - | chr3.1:49618762-49618781 | MS.gene28299:intron | 50.0% | |
| GGAACCGGCAATTCAAGGAA+CGG | - | chr3.1:49617212-49617231 | MS.gene28299:intron | 50.0% | |
| TACCCGTGTCGGATACGTAT+CGG | + | chr3.1:49619398-49619417 | None:intergenic | 50.0% | |
| TATCGGATACCGATACTCCG+CGG | + | chr3.1:49619381-49619400 | None:intergenic | 50.0% | |
| TCAAGCATGGCTGTACTTGC+TGG | - | chr3.1:49620599-49620618 | MS.gene28299:intron | 50.0% | |
| TGAAGGTGGCTAAGGAAGCA+GGG | - | chr3.1:49617244-49617263 | MS.gene28299:CDS | 50.0% | |
| TTGAAGGTGGCTAAGGAAGC+AGG | - | chr3.1:49617243-49617262 | MS.gene28299:CDS | 50.0% | |
| ! | ACACGGGTACGACACCATTT+TGG | - | chr3.1:49619409-49619428 | MS.gene28299:intron | 50.0% |
| ! | AGCAGCTAAGGCAGGGTTTT+AGG | + | chr3.1:49620803-49620822 | None:intergenic | 50.0% |
| ! | CAAAGGGTTGTGCTCCCTTT+TGG | + | chr3.1:49619740-49619759 | None:intergenic | 50.0% |
| ! | CCAGCTAGGACTCGGTATAA+TGG | + | chr3.1:49617304-49617323 | None:intergenic | 50.0% |
| ! | GACGGACCTTGAGTATTGCA+AGG | - | chr3.1:49617356-49617375 | MS.gene28299:CDS | 50.0% |
| ! | GCTAGGACTCGGTATAATGG+CGG | + | chr3.1:49617301-49617320 | None:intergenic | 50.0% |
| ! | TTGGAGTATCCGGGCTTCAT+AGG | - | chr3.1:49619428-49619447 | MS.gene28299:intron | 50.0% |
| !! | AAATGGTGTCGTACCCGTGT+CGG | + | chr3.1:49619409-49619428 | None:intergenic | 50.0% |
| AAAGGGCCCAATGCTGTACC+AGG | + | chr3.1:49620560-49620579 | None:intergenic | 55.0% | |
| AACGCCGGCACAACCTTTCA+CGG | + | chr3.1:49617035-49617054 | None:intergenic | 55.0% | |
| AAGGGCCCAATGCTGTACCA+GGG | + | chr3.1:49620559-49620578 | None:intergenic | 55.0% | |
| ACAACCGTCGCACAATGCAG+TGG | + | chr3.1:49621487-49621506 | None:intergenic | 55.0% | |
| ACGTCCACTGCATTGTGCGA+CGG | - | chr3.1:49621480-49621499 | MS.gene28299:intron | 55.0% | |
| CCCGGATACGTAGTGCGATA+CGG | - | chr3.1:49618780-49618799 | MS.gene28299:intron | 55.0% | |
| CCCGTATCGCACTACGTATC+CGG | + | chr3.1:49618784-49618803 | None:intergenic | 55.0% | |
| CCGGATACGTAGTGCGATAC+GGG | - | chr3.1:49618781-49618800 | MS.gene28299:intron | 55.0% | |
| CCGTATCGCACTACGTATCC+GGG | + | chr3.1:49618783-49618802 | None:intergenic | 55.0% | |
| CGTATCCGGGCTTCATAGGA+AGG | + | chr3.1:49618770-49618789 | None:intergenic | 55.0% | |
| GAAGGTGGCTAAGGAAGCAG+GGG | - | chr3.1:49617245-49617264 | MS.gene28299:CDS | 55.0% | |
| GTTCACCCCTAGTGGAAAGG+AGG | - | chr3.1:49617725-49617744 | MS.gene28299:intron | 55.0% | |
| TGCAACGCGTAGAGCTCATC+GGG | + | chr3.1:49618584-49618603 | None:intergenic | 55.0% | |
| ! | TACGGTATCCGGAGTATCCG+CGG | - | chr3.1:49619361-49619380 | MS.gene28299:intron | 55.0% |
| CAGCGGAGCCATCGGATCAT+GGG | - | chr3.1:49616684-49616703 | MS.gene28299:CDS | 60.0% | |
| CCGATACTCCGCGGATACTC+CGG | + | chr3.1:49619372-49619391 | None:intergenic | 60.0% | |
| CGGTGAAGTCAAAGACCCCG+AGG | - | chr3.1:49617081-49617100 | MS.gene28299:intron | 60.0% | |
| GCGAACCACCCATGATCCGA+TGG | + | chr3.1:49616695-49616714 | None:intergenic | 60.0% | |
| TCAGCTGGCCAGCTAGGACT+CGG | + | chr3.1:49617312-49617331 | None:intergenic | 60.0% | |
| ! | CCGGAGTATCCGCGGAGTAT+CGG | - | chr3.1:49619369-49619388 | MS.gene28299:intron | 60.0% |
| ! | GTTTGTGTCACCGGTGCCAG+CGG | - | chr3.1:49616667-49616686 | MS.gene28299:CDS | 60.0% |
| CCAGCGGAGCCATCGGATCA+TGG | - | chr3.1:49616683-49616702 | MS.gene28299:CDS | 65.0% | |
| CCATGATCCGATGGCTCCGC+TGG | + | chr3.1:49616686-49616705 | None:intergenic | 65.0% | |
| CGGAGCCATCGGATCATGGG+TGG | - | chr3.1:49616687-49616706 | MS.gene28299:CDS | 65.0% | |
| GCCGCCGTGAAAGGTTGTGC+CGG | - | chr3.1:49617028-49617047 | MS.gene28299:intron | 65.0% | |
| GCCGGCACAACCTTTCACGG+CGG | + | chr3.1:49617032-49617051 | None:intergenic | 65.0% | |
| GGTGGCTAAGGAAGCAGGGG+TGG | - | chr3.1:49617248-49617267 | MS.gene28299:CDS | 65.0% | |
| GTTCGCCTCCTCCTCGAACG+CGG | - | chr3.1:49616709-49616728 | MS.gene28299:CDS | 65.0% | |
| TCTATCGCGGCCGCCGTGAA+AGG | - | chr3.1:49617019-49617038 | MS.gene28299:intron | 65.0% | |
| TGTAGCCGCGTTCGAGGAGG+AGG | + | chr3.1:49616717-49616736 | None:intergenic | 65.0% | |
| AGCAGGGGTGGAGCGTGTGG+TGG | - | chr3.1:49617260-49617279 | MS.gene28299:CDS | 70.0% | |
| CGGTGTAGCCGCGTTCGAGG+AGG | + | chr3.1:49616720-49616739 | None:intergenic | 70.0% | |
| GGAAGCAGGGGTGGAGCGTG+TGG | - | chr3.1:49617257-49617276 | MS.gene28299:CDS | 70.0% | |
| GGACGGTGTAGCCGCGTTCG+AGG | + | chr3.1:49616723-49616742 | None:intergenic | 70.0% | |
| TCCGATGGCTCCGCTGGCAC+CGG | + | chr3.1:49616680-49616699 | None:intergenic | 70.0% | |
| ! | ACCGGTGCCAGCGGAGCCAT+CGG | - | chr3.1:49616676-49616695 | MS.gene28299:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 49616655 | 49621742 | 49616655 | ID=MS.gene28299 |
| chr3.1 | mRNA | 49616655 | 49621742 | 49616655 | ID=MS.gene28299.t1;Parent=MS.gene28299 |
| chr3.1 | exon | 49621634 | 49621742 | 49621634 | ID=MS.gene28299.t1.exon1;Parent=MS.gene28299.t1 |
| chr3.1 | CDS | 49621634 | 49621742 | 49621634 | ID=cds.MS.gene28299.t1;Parent=MS.gene28299.t1 |
| chr3.1 | exon | 49621295 | 49621467 | 49621295 | ID=MS.gene28299.t1.exon2;Parent=MS.gene28299.t1 |
| chr3.1 | CDS | 49621295 | 49621467 | 49621295 | ID=cds.MS.gene28299.t1;Parent=MS.gene28299.t1 |
| chr3.1 | exon | 49621011 | 49621196 | 49621011 | ID=MS.gene28299.t1.exon3;Parent=MS.gene28299.t1 |
| chr3.1 | CDS | 49621011 | 49621196 | 49621011 | ID=cds.MS.gene28299.t1;Parent=MS.gene28299.t1 |
| chr3.1 | exon | 49617765 | 49617927 | 49617765 | ID=MS.gene28299.t1.exon4;Parent=MS.gene28299.t1 |
| chr3.1 | CDS | 49617765 | 49617927 | 49617765 | ID=cds.MS.gene28299.t1;Parent=MS.gene28299.t1 |
| chr3.1 | exon | 49617243 | 49617429 | 49617243 | ID=MS.gene28299.t1.exon5;Parent=MS.gene28299.t1 |
| chr3.1 | CDS | 49617243 | 49617429 | 49617243 | ID=cds.MS.gene28299.t1;Parent=MS.gene28299.t1 |
| chr3.1 | exon | 49616655 | 49616796 | 49616655 | ID=MS.gene28299.t1.exon6;Parent=MS.gene28299.t1 |
| chr3.1 | CDS | 49616655 | 49616796 | 49616655 | ID=cds.MS.gene28299.t1;Parent=MS.gene28299.t1 |
| Gene Sequence |
| Protein sequence |
