Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053997.t1 | XP_003606488.1 | 97.1 | 489 | 14 | 0 | 1 | 489 | 1 | 489 | 4.50E-284 | 986.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053997.t1 | G7JRG3 | 97.1 | 489 | 14 | 0 | 1 | 489 | 1 | 489 | 3.2e-284 | 986.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049257 | MS.gene053997 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene053997 | 0.841466 | 4.67E-58 | -1.69E-46 |
| MS.gene050375 | MS.gene053997 | 0.801393 | 9.20E-49 | -1.69E-46 |
| MS.gene05081 | MS.gene053997 | 0.815753 | 7.86E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene053997 | 0.80126 | 9.79E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene053997 | 0.803702 | 3.07E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene053997 | 0.810881 | 9.24E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene053997 | 0.809226 | 2.10E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene05589 | 0.806605 | 7.58E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene056166 | 0.824889 | 6.32E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene056877 | 0.818005 | 2.46E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene056878 | 0.809014 | 2.33E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene057019 | 0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene059023 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene059303 | 0.838533 | 2.72E-57 | -1.69E-46 |
| MS.gene053997 | MS.gene060485 | 0.836267 | 1.03E-56 | -1.69E-46 |
| MS.gene053997 | MS.gene061360 | 0.816357 | 5.76E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene064707 | 0.8056 | 1.23E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene065675 | 0.807856 | 4.12E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene067329 | 0.844138 | 9.10E-59 | -1.69E-46 |
| MS.gene053997 | MS.gene068509 | 0.818231 | 2.18E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene069593 | 0.814959 | 1.18E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene069855 | 0.827263 | 1.72E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene070402 | 0.804168 | 2.46E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene073243 | 0.832633 | 8.46E-56 | -1.69E-46 |
| MS.gene053997 | MS.gene07329 | 0.814156 | 1.78E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene08254 | 0.840596 | 7.91E-58 | -1.69E-46 |
| MS.gene053997 | MS.gene08523 | 0.850398 | 1.74E-60 | -1.69E-46 |
| MS.gene053997 | MS.gene08588 | 0.893418 | 6.40E-75 | -1.69E-46 |
| MS.gene053997 | MS.gene09053 | 0.834356 | 3.14E-56 | -1.69E-46 |
| MS.gene053997 | MS.gene09193 | 0.813758 | 2.18E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene20358 | 0.807654 | 4.55E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene20878 | 0.821422 | 4.07E-53 | -1.69E-46 |
| MS.gene053997 | MS.gene21731 | 0.804188 | 2.44E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene21892 | 0.811392 | 7.16E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene22474 | 0.803595 | 3.23E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene22475 | 0.824808 | 6.60E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene22588 | 0.806911 | 6.54E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene24024 | 0.803484 | 3.41E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene26527 | 0.810025 | 1.41E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene27981 | 0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene053997 | MS.gene28105 | 0.81496 | 1.18E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene28299 | 0.810448 | 1.15E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene28990 | 0.820569 | 6.40E-53 | -1.69E-46 |
| MS.gene053997 | MS.gene29014 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene29334 | 0.821774 | 3.38E-53 | -1.69E-46 |
| MS.gene053997 | MS.gene33309 | 0.822812 | 1.94E-53 | -1.69E-46 |
| MS.gene053997 | MS.gene33769 | 0.800189 | 1.62E-48 | -1.69E-46 |
| MS.gene053997 | MS.gene33784 | 0.805 | 1.65E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene33834 | 0.805886 | 1.07E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene34038 | 0.839078 | 1.96E-57 | -1.69E-46 |
| MS.gene053997 | MS.gene34171 | 0.815547 | 8.74E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene34308 | 0.811355 | 7.30E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene34554 | 0.802302 | 5.98E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene35134 | 0.810809 | 9.58E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene35712 | 0.828825 | 7.25E-55 | -1.69E-46 |
| MS.gene053997 | MS.gene35812 | 0.804044 | 2.61E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene36337 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene38232 | 0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene053997 | MS.gene42301 | 0.824218 | 9.09E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene44439 | 0.823367 | 1.44E-53 | -1.69E-46 |
| MS.gene053997 | MS.gene44440 | 0.833893 | 4.11E-56 | -1.69E-46 |
| MS.gene053997 | MS.gene49436 | 0.80843 | 3.11E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene49971 | 0.801977 | 6.98E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene49979 | 0.817044 | 4.04E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene51786 | 0.822271 | 2.59E-53 | -1.69E-46 |
| MS.gene053997 | MS.gene51887 | 0.807284 | 5.45E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene52725 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene54412 | 0.835787 | 1.37E-56 | -1.69E-46 |
| MS.gene053997 | MS.gene54795 | 0.838123 | 3.47E-57 | -1.69E-46 |
| MS.gene053997 | MS.gene55678 | 0.829847 | 4.09E-55 | -1.69E-46 |
| MS.gene053997 | MS.gene56776 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene053997 | MS.gene57264 | 0.817301 | 3.54E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene57275 | 0.805363 | 1.38E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene57947 | 0.803215 | 3.88E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene60176 | 0.819262 | 1.27E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene60177 | 0.817083 | 3.96E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene61144 | 0.817535 | 3.14E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene61145 | 0.827559 | 1.46E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene62763 | 0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene63751 | -0.819226 | 1.30E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene65400 | 0.810569 | 1.08E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene67279 | 0.83773 | 4.37E-57 | -1.69E-46 |
| MS.gene053997 | MS.gene68980 | 0.814309 | 1.64E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene69450 | 0.807404 | 5.14E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene70212 | 0.802552 | 5.31E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene72720 | 0.803473 | 3.43E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene73544 | 0.827517 | 1.50E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene73545 | 0.811792 | 5.86E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene73660 | 0.841569 | 4.39E-58 | -1.69E-46 |
| MS.gene053997 | MS.gene74228 | 0.806924 | 6.49E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene75432 | 0.801448 | 8.96E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene76141 | 0.814264 | 1.68E-51 | -1.69E-46 |
| MS.gene053997 | MS.gene76521 | 0.807614 | 4.64E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene77025 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene78643 | 0.805639 | 1.21E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene80905 | 0.819569 | 1.08E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene81747 | 0.80871 | 2.71E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene82011 | 0.810004 | 1.43E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene82917 | 0.815787 | 7.73E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene85136 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene85212 | 0.803558 | 3.29E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene88640 | 0.827676 | 1.37E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene91156 | 0.824052 | 9.94E-54 | -1.69E-46 |
| MS.gene053997 | MS.gene91392 | 0.807035 | 6.15E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene93030 | 0.805786 | 1.13E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene93031 | 0.815486 | 9.02E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene94623 | 0.802734 | 4.87E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene94807 | 0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene053997 | MS.gene95041 | 0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene053997 | MS.gene95715 | 0.809122 | 2.21E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene96252 | 0.818936 | 1.51E-52 | -1.69E-46 |
| MS.gene053997 | MS.gene97422 | 0.806312 | 8.75E-50 | -1.69E-46 |
| MS.gene053997 | MS.gene97656 | 0.800314 | 1.53E-48 | -1.69E-46 |
| MS.gene053997 | MS.gene98678 | 0.813241 | 2.83E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053997.t1 | MTR_4g060900 | 97.137 | 489 | 14 | 0 | 1 | 489 | 1 | 489 | 0.0 | 995 |
| MS.gene053997.t1 | MTR_7g100780 | 57.240 | 442 | 179 | 4 | 16 | 455 | 56 | 489 | 0.0 | 554 |
| MS.gene053997.t1 | MTR_4g053620 | 32.749 | 342 | 179 | 10 | 104 | 434 | 30 | 331 | 2.90e-43 | 157 |
| MS.gene053997.t1 | MTR_3g104770 | 32.399 | 321 | 173 | 11 | 123 | 434 | 129 | 414 | 1.03e-40 | 151 |
| MS.gene053997.t1 | MTR_1g060150 | 31.065 | 338 | 197 | 8 | 119 | 450 | 68 | 375 | 2.31e-40 | 149 |
| MS.gene053997.t1 | MTR_2g086290 | 30.275 | 327 | 196 | 9 | 119 | 443 | 36 | 332 | 2.71e-39 | 145 |
| MS.gene053997.t1 | MTR_1g060130 | 29.223 | 373 | 221 | 10 | 86 | 450 | 38 | 375 | 3.63e-39 | 146 |
| MS.gene053997.t1 | MTR_2g086300 | 31.737 | 334 | 188 | 11 | 122 | 449 | 47 | 346 | 1.28e-38 | 144 |
| MS.gene053997.t1 | MTR_1g050458 | 28.972 | 321 | 187 | 8 | 119 | 430 | 36 | 324 | 4.05e-35 | 134 |
| MS.gene053997.t1 | MTR_1g050458 | 44.444 | 135 | 72 | 2 | 119 | 250 | 36 | 170 | 8.29e-29 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053997.t1 | AT3G09690 | 59.645 | 451 | 173 | 3 | 9 | 457 | 57 | 500 | 0.0 | 582 |
| MS.gene053997.t1 | AT3G09690 | 59.645 | 451 | 173 | 3 | 9 | 457 | 57 | 500 | 0.0 | 582 |
| MS.gene053997.t1 | AT5G02970 | 55.965 | 461 | 194 | 3 | 13 | 471 | 58 | 511 | 0.0 | 555 |
| MS.gene053997.t1 | AT5G22460 | 28.531 | 354 | 210 | 8 | 88 | 430 | 1 | 322 | 3.04e-40 | 148 |
| MS.gene053997.t1 | AT5G22460 | 28.531 | 354 | 210 | 8 | 88 | 430 | 1 | 322 | 3.04e-40 | 148 |
| MS.gene053997.t1 | AT5G22460 | 28.531 | 354 | 210 | 8 | 88 | 430 | 1 | 322 | 3.04e-40 | 148 |
| MS.gene053997.t1 | AT3G44510 | 32.219 | 329 | 186 | 10 | 124 | 444 | 8 | 307 | 2.01e-39 | 145 |
| MS.gene053997.t1 | AT3G54240 | 27.893 | 337 | 212 | 6 | 119 | 452 | 40 | 348 | 1.06e-38 | 144 |
| MS.gene053997.t1 | AT1G74280 | 29.787 | 329 | 175 | 6 | 119 | 430 | 56 | 345 | 1.81e-38 | 144 |
| MS.gene053997.t1 | AT2G36290 | 30.636 | 346 | 206 | 9 | 93 | 430 | 8 | 327 | 6.43e-37 | 139 |
| MS.gene053997.t1 | AT2G36290 | 30.460 | 348 | 204 | 10 | 93 | 430 | 22 | 341 | 8.92e-37 | 139 |
| MS.gene053997.t1 | AT1G08310 | 30.814 | 344 | 175 | 10 | 119 | 444 | 5 | 303 | 1.25e-36 | 137 |
| MS.gene053997.t1 | AT1G08310 | 30.636 | 346 | 176 | 10 | 119 | 444 | 5 | 306 | 3.19e-36 | 137 |
| MS.gene053997.t1 | AT3G44510 | 43.094 | 181 | 85 | 6 | 124 | 296 | 8 | 178 | 1.06e-35 | 133 |
| MS.gene053997.t1 | AT1G74290 | 30.218 | 321 | 185 | 7 | 119 | 430 | 56 | 346 | 3.91e-34 | 132 |
| MS.gene053997.t1 | AT1G74300 | 29.630 | 324 | 182 | 6 | 119 | 430 | 39 | 328 | 6.52e-34 | 131 |
| MS.gene053997.t1 | AT3G03240 | 28.797 | 316 | 184 | 9 | 122 | 430 | 35 | 316 | 2.71e-32 | 126 |
| MS.gene053997.t1 | AT3G48410 | 27.506 | 389 | 210 | 12 | 82 | 448 | 33 | 371 | 7.39e-31 | 123 |
| MS.gene053997.t1 | AT3G48410 | 27.957 | 372 | 198 | 11 | 82 | 431 | 75 | 398 | 1.21e-30 | 124 |
| MS.gene053997.t1 | AT1G08310 | 48.120 | 133 | 67 | 2 | 119 | 250 | 5 | 136 | 2.50e-30 | 119 |
| MS.gene053997.t1 | AT3G03230 | 27.419 | 310 | 195 | 6 | 122 | 430 | 35 | 315 | 8.64e-30 | 119 |
| MS.gene053997.t1 | AT1G74300 | 27.757 | 263 | 146 | 5 | 178 | 430 | 1 | 229 | 1.10e-22 | 97.4 |
Find 115 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTCATTGTTAAGAAATT+TGG | 0.136021 | 4.3:+41578465 | MS.gene053997:CDS |
| ACAAAAGGAATGTGCTTAAT+TGG | 0.161569 | 4.3:+41581346 | MS.gene053997:CDS |
| TATCAGCGAAGTTTCTTATC+AGG | 0.205500 | 4.3:+41580836 | MS.gene053997:CDS |
| CTCTTGGTGTTGACAAGTTT+TGG | 0.207857 | 4.3:+41580091 | MS.gene053997:CDS |
| CAAGTTCAACGTTGGCTTCT+AGG | 0.207888 | 4.3:-41582421 | None:intergenic |
| ATCCAATCTATGAGGATTTC+TGG | 0.211014 | 4.3:+41581202 | MS.gene053997:CDS |
| TGTGGAGGAAGCTGCTTTGC+AGG | 0.230425 | 4.3:+41581272 | MS.gene053997:CDS |
| TTCCTTTCCTCTCGGCTTGC+AGG | 0.230918 | 4.3:+41579818 | MS.gene053997:CDS |
| TGCTTTGCAGGTCTCGAATT+GGG | 0.231694 | 4.3:+41581284 | MS.gene053997:CDS |
| CACTGAAACTCAGGAGTATA+CGG | 0.248631 | 4.3:+41581383 | MS.gene053997:CDS |
| CGAAGCTTTCCTAGACTTCT+TGG | 0.254206 | 4.3:+41580806 | MS.gene053997:CDS |
| ACGTTGGCTTCTAGGGTAAT+TGG | 0.261598 | 4.3:-41582413 | None:intergenic |
| CTAACTGTAGAATTCTTAAA+AGG | 0.264307 | 4.3:+41578402 | MS.gene053997:CDS |
| GTTAAGAAATTTGGAAAGAT+TGG | 0.278897 | 4.3:+41578474 | MS.gene053997:CDS |
| ACTTATGATCTGCCTGGTTT+TGG | 0.280877 | 4.3:+41580000 | MS.gene053997:CDS |
| TGAGGCTGAGAGGGCCTTGC+GGG | 0.293815 | 4.3:-41582370 | None:intergenic |
| GATTCACTGATGGAAGAATT+TGG | 0.296353 | 4.3:+41579964 | MS.gene053997:CDS |
| TCCTCATCCCAAACGAAATC+TGG | 0.315816 | 4.3:+41580032 | MS.gene053997:CDS |
| TTAATACCTGCAAGTCTATC+AGG | 0.327430 | 4.3:-41580168 | None:intergenic |
| TGACGATTCCAGATTTCGTT+TGG | 0.334193 | 4.3:-41580040 | None:intergenic |
| TCTGCAACTTGAGGTCTAAA+AGG | 0.346212 | 4.3:-41581314 | None:intergenic |
| CTGCTTTGCAGGTCTCGAAT+TGG | 0.353135 | 4.3:+41581283 | MS.gene053997:CDS |
| CGTTTGAAATTAGGAATTCC+TGG | 0.355664 | 4.3:+41579934 | MS.gene053997:intron |
| TACATACCTGATAGACTTGC+AGG | 0.361619 | 4.3:+41580162 | MS.gene053997:CDS |
| TGCTACCCGCATTATGCTTC+CGG | 0.364526 | 4.3:+41579718 | MS.gene053997:CDS |
| TGCCAGAAATCCTCATAGAT+TGG | 0.373531 | 4.3:-41581204 | None:intergenic |
| TTTGTCATCAAAGGATCATA+TGG | 0.395653 | 4.3:-41580719 | None:intergenic |
| CAGGAGTATACGGGATTTCT+CGG | 0.400274 | 4.3:+41581393 | MS.gene053997:CDS |
| GACGATTCCAGATTTCGTTT+GGG | 0.408411 | 4.3:-41580039 | None:intergenic |
| CTCATACTTTCCTTTCCTCT+CGG | 0.410239 | 4.3:+41579810 | MS.gene053997:CDS |
| GTTTCTTTACTTGCTTTCTC+AGG | 0.414312 | 4.3:+41578606 | MS.gene053997:CDS |
| CAAGTGGAAGCAAGCATGCT+TGG | 0.416127 | 4.3:+41580127 | MS.gene053997:CDS |
| GACGAAGAACCTGGAACAAA+TGG | 0.419319 | 4.3:+41580750 | MS.gene053997:CDS |
| GGGATGTGGAAGAATCAATT+AGG | 0.420004 | 4.3:+41581229 | MS.gene053997:CDS |
| GAATGTGCTTAATTGGCTTA+AGG | 0.424123 | 4.3:+41581353 | MS.gene053997:CDS |
| TGAAGTGGGTCTTTATCTTC+AGG | 0.424536 | 4.3:-41578561 | None:intergenic |
| ATACAAGGAGCAAGGTGTTT+CGG | 0.426151 | 4.3:+41579757 | MS.gene053997:CDS |
| CTCTCTTCGTTTGTCATCAA+AGG | 0.426304 | 4.3:-41580728 | None:intergenic |
| TTAAGAAATTTGGAAAGATT+GGG | 0.427485 | 4.3:+41578475 | MS.gene053997:CDS |
| AAAAGTATATGTATGTGAAA+TGG | 0.431214 | 4.3:-41582304 | None:intergenic |
| TGTGTAAGAGAGTTCATGAT+TGG | 0.436128 | 4.3:+41578369 | MS.gene053997:CDS |
| AGGTGGCTGTCTTTATCTCT+TGG | 0.445446 | 4.3:+41580878 | MS.gene053997:CDS |
| ACGAAGAGAGACGAAGAACC+TGG | 0.455949 | 4.3:+41580741 | MS.gene053997:CDS |
| AAGTTCAACGTTGGCTTCTA+GGG | 0.458277 | 4.3:-41582420 | None:intergenic |
| CTCACTTGCCATATGTGTAT+TGG | 0.459865 | 4.3:-41581417 | None:intergenic |
| TCCAGATTTCGTTTGGGATG+AGG | 0.462321 | 4.3:-41580033 | None:intergenic |
| AAGTGGAAGCAAGCATGCTT+GGG | 0.466214 | 4.3:+41580128 | MS.gene053997:CDS |
| GGATCATATGGGTTCACCAT+GGG | 0.473212 | 4.3:-41580707 | None:intergenic |
| TTCTCGGTCCAATACACATA+TGG | 0.474933 | 4.3:+41581409 | MS.gene053997:CDS |
| GGAAGCATGGTCAGATTGAC+AGG | 0.481984 | 4.3:+41580858 | MS.gene053997:CDS |
| TTGATTACTTATGATCTGCC+TGG | 0.485276 | 4.3:+41579994 | MS.gene053997:CDS |
| GTGTAAGAGAGTTCATGATT+GGG | 0.487800 | 4.3:+41578370 | MS.gene053997:CDS |
| ATAAAGACCCACTTCATGCT+TGG | 0.491569 | 4.3:+41578568 | MS.gene053997:CDS |
| TTTGTGCATCGCGTACTACC+TGG | 0.493610 | 4.3:+41582251 | MS.gene053997:CDS |
| AGTTTGTGTACTGCAGCTCC+AGG | 0.498358 | 4.3:-41582269 | None:intergenic |
| TGCAGAAACGAAAATACAAA+AGG | 0.502548 | 4.3:+41581331 | MS.gene053997:CDS |
| TGGAAGATACATGGCATACA+AGG | 0.504189 | 4.3:+41579742 | MS.gene053997:CDS |
| GCACAAAATCAGTCATTGAC+GGG | 0.504891 | 4.3:-41582235 | None:intergenic |
| CTATGAGGATTTCTGGCAAA+GGG | 0.505065 | 4.3:+41581209 | MS.gene053997:CDS |
| GTCTTTATCTCTTGGAAAGA+GGG | 0.506713 | 4.3:+41580886 | MS.gene053997:CDS |
| GGATTTCTGGCAAAGGGATG+TGG | 0.507209 | 4.3:+41581215 | MS.gene053997:CDS |
| CGAGAGGAAAGGAAAGTATG+AGG | 0.512168 | 4.3:-41579809 | None:intergenic |
| AAAATACTTGCTTCTCAAGT+GGG | 0.518790 | 4.3:-41579682 | None:intergenic |
| TGTCTTTATCTCTTGGAAAG+AGG | 0.519291 | 4.3:+41580885 | MS.gene053997:CDS |
| GCTTTGCAGGTCTCGAATTG+GGG | 0.522101 | 4.3:+41581285 | MS.gene053997:CDS |
| AAAGCAGCTTCCTCCACAAA+GGG | 0.525187 | 4.3:-41581267 | None:intergenic |
| TATGTGAAATGGCCTTCATA+TGG | 0.527300 | 4.3:-41582293 | None:intergenic |
| TTGTCATCAAAGGATCATAT+GGG | 0.529008 | 4.3:-41580718 | None:intergenic |
| TAGAAGAAACCAAGAAGTCT+AGG | 0.529335 | 4.3:-41580815 | None:intergenic |
| TGTAAGAGAGTTCATGATTG+GGG | 0.530248 | 4.3:+41578371 | MS.gene053997:CDS |
| ATCAGCGAAGTTTCTTATCA+GGG | 0.532446 | 4.3:+41580837 | MS.gene053997:CDS |
| TATGCCATGTATCTTCCATC+CGG | 0.539640 | 4.3:-41579737 | None:intergenic |
| ATAATGCGGGTAGCACTAGC+AGG | 0.539782 | 4.3:-41579710 | None:intergenic |
| AAGAAATGCTGAGGCTGAGA+GGG | 0.556389 | 4.3:-41582379 | None:intergenic |
| CTGAGGCTGAGAGGGCCTTG+CGG | 0.559279 | 4.3:-41582371 | None:intergenic |
| TTGCTGTTCAAGTTCAACGT+TGG | 0.561905 | 4.3:-41582429 | None:intergenic |
| TGGATCATTGGTTACTCAAG+TGG | 0.565359 | 4.3:+41580111 | MS.gene053997:CDS |
| TGGTGTTAAAGATTCACTGA+TGG | 0.566190 | 4.3:+41579954 | MS.gene053997:CDS |
| ACTGAAACTCAGGAGTATAC+GGG | 0.566332 | 4.3:+41581384 | MS.gene053997:CDS |
| ATCAGTGAATCTTTAACACC+AGG | 0.570063 | 4.3:-41579952 | None:intergenic |
| CAAAGCAGCTTCCTCCACAA+AGG | 0.573514 | 4.3:-41581268 | None:intergenic |
| GATGGAAGATCCAATCTATG+AGG | 0.573832 | 4.3:+41581194 | MS.gene053997:CDS |
| TGCACAAAATCAGTCATTGA+CGG | 0.575384 | 4.3:-41582236 | None:intergenic |
| ATGACAAACCAAGCATGAAG+TGG | 0.579236 | 4.3:-41578576 | None:intergenic |
| TCCATCCGGAAGCATAATGC+GGG | 0.582006 | 4.3:-41579723 | None:intergenic |
| AGGAAATGTGAAACCCTTTG+TGG | 0.583951 | 4.3:+41581254 | MS.gene053997:CDS |
| GTACACAAACTCCCATATGA+AGG | 0.587384 | 4.3:+41582281 | MS.gene053997:CDS |
| GGATCGCTCTCACCAAAACC+AGG | 0.589789 | 4.3:-41580012 | None:intergenic |
| TTGTTCAACAATTTCTCACA+AGG | 0.592322 | 4.3:-41578513 | None:intergenic |
| GAGGCTGAGAGGGCCTTGCG+GGG | 0.592778 | 4.3:-41582369 | None:intergenic |
| ACCCGCATTATGCTTCCGGA+TGG | 0.593805 | 4.3:+41579722 | MS.gene053997:CDS |
| ATGTGAAATGGCCTTCATAT+GGG | 0.602865 | 4.3:-41582292 | None:intergenic |
| TTCCATCCGGAAGCATAATG+CGG | 0.604964 | 4.3:-41579724 | None:intergenic |
| CACAAAATCAGTCATTGACG+GGG | 0.606548 | 4.3:-41582234 | None:intergenic |
| AACCTGCAAGCCGAGAGGAA+AGG | 0.606711 | 4.3:-41579820 | None:intergenic |
| GATCATATGGGTTCACCATG+GGG | 0.606822 | 4.3:-41580706 | None:intergenic |
| GTGGAAGAATCAATTAGGCA+AGG | 0.615184 | 4.3:+41581234 | MS.gene053997:CDS |
| AGTTTCTTATCAGGGAAGCA+TGG | 0.625370 | 4.3:+41580845 | MS.gene053997:CDS |
| ACAGGGAATGGATGACAAAG+TGG | 0.625940 | 4.3:+41582208 | MS.gene053997:intron |
| TCTATGAGGATTTCTGGCAA+AGG | 0.628041 | 4.3:+41581208 | MS.gene053997:CDS |
| GCTTCCGGATGGAAGATACA+TGG | 0.631513 | 4.3:+41579733 | MS.gene053997:CDS |
| TGACAAACCAAGCATGAAGT+GGG | 0.631660 | 4.3:-41578575 | None:intergenic |
| AGGATCATATGGGTTCACCA+TGG | 0.635002 | 4.3:-41580708 | None:intergenic |
| CAAGAAGTAGTAGCAAGTAG+TGG | 0.638951 | 4.3:+41582449 | MS.gene053997:CDS |
| TACATGGCATACAAGGAGCA+AGG | 0.639291 | 4.3:+41579749 | MS.gene053997:CDS |
| GTGTAGTAAATATCTGTCTG+TGG | 0.641522 | 4.3:-41582337 | None:intergenic |
| AAAGAAATGCTGAGGCTGAG+AGG | 0.645314 | 4.3:-41582380 | None:intergenic |
| AAATGTGAAACCCTTTGTGG+AGG | 0.646017 | 4.3:+41581257 | MS.gene053997:CDS |
| CTACTTCTAAAGAAATGCTG+AGG | 0.649194 | 4.3:-41582388 | None:intergenic |
| AAATACTTGCTTCTCAAGTG+GGG | 0.651959 | 4.3:-41579681 | None:intergenic |
| ATCATATGGGTTCACCATGG+GGG | 0.655135 | 4.3:-41580705 | None:intergenic |
| TTGTGTGTACTTCTAATCAG+TGG | 0.680829 | 4.3:-41582480 | None:intergenic |
| AGCATGGTCAGATTGACAGG+TGG | 0.689331 | 4.3:+41580861 | MS.gene053997:CDS |
| CAAACAACCTGCAAGCCGAG+AGG | 0.700337 | 4.3:-41579825 | None:intergenic |
| ACAAAATCAGTCATTGACGG+GGG | 0.748115 | 4.3:-41582233 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTCATATTTGCAATT+TGG | - | chr4.3:41581520-41581539 | None:intergenic | 15.0% |
| !!! | ATGAAAATATTAGCTTTTAT+AGG | + | chr4.3:41581530-41581549 | MS.gene053997:intron | 15.0% |
| !!! | GTAAAATATTTAAAACTCTT+GGG | - | chr4.3:41581142-41581161 | None:intergenic | 15.0% |
| !!! | TACTTCATTAAATTTAGTTT+AGG | + | chr4.3:41580336-41580355 | MS.gene053997:intron | 15.0% |
| !!! | TCTAAAATGAGTTTAAAAAT+TGG | - | chr4.3:41581657-41581676 | None:intergenic | 15.0% |
| !!! | TGAAAATATTAGCTTTTATA+GGG | + | chr4.3:41581531-41581550 | MS.gene053997:intron | 15.0% |
| !!! | TGTAAAATATTTAAAACTCT+TGG | - | chr4.3:41581143-41581162 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAAAGATAAGCA+AGG | - | chr4.3:41580920-41580939 | None:intergenic | 20.0% |
| !! | AGTTAAATCAATAAACAAGA+CGG | + | chr4.3:41582045-41582064 | MS.gene053997:intron | 20.0% |
| !! | TCTTTCATTGTTAAGAAATT+TGG | + | chr4.3:41578465-41578484 | MS.gene053997:CDS | 20.0% |
| !! | TTAAGAAATTTGGAAAGATT+GGG | + | chr4.3:41578475-41578494 | MS.gene053997:CDS | 20.0% |
| !!! | AAAAGTATATGTATGTGAAA+TGG | - | chr4.3:41582307-41582326 | None:intergenic | 20.0% |
| !!! | AAATTCTTTTAAGTTCTCAT+AGG | + | chr4.3:41581750-41581769 | MS.gene053997:intron | 20.0% |
| !!! | AATTTGTATTTCTTGATGAT+GGG | + | chr4.3:41578748-41578767 | MS.gene053997:intron | 20.0% |
| !!! | ACTTTTAACTTGACAAAATT+TGG | + | chr4.3:41580244-41580263 | MS.gene053997:intron | 20.0% |
| !!! | ATTTCTTGTATTGTGTTTTT+AGG | + | chr4.3:41579543-41579562 | MS.gene053997:intron | 20.0% |
| !!! | TAATTTAAAACTATGAATGC+AGG | + | chr4.3:41579352-41579371 | MS.gene053997:intron | 20.0% |
| !!! | TATGTATGGTTTTAAATTGT+GGG | + | chr4.3:41578796-41578815 | MS.gene053997:intron | 20.0% |
| !!! | TCTATTTCTCAATTTATTAC+CGG | + | chr4.3:41580549-41580568 | MS.gene053997:intron | 20.0% |
| !!! | TTACTTTTTTTTTGAAGTTG+TGG | + | chr4.3:41578697-41578716 | MS.gene053997:intron | 20.0% |
| ! | AAATCTGTGTTTACAAAAGT+TGG | + | chr4.3:41581097-41581116 | MS.gene053997:intron | 25.0% |
| ! | AACAACCAAAAAAAGAAACA+TGG | - | chr4.3:41578646-41578665 | None:intergenic | 25.0% |
| ! | ACAACCAAAAAAAGAAACAT+GGG | - | chr4.3:41578645-41578664 | None:intergenic | 25.0% |
| ! | AGCATAAAACATTGAGAATT+AGG | - | chr4.3:41579509-41579528 | None:intergenic | 25.0% |
| ! | ATACATACAAACAAACATAG+AGG | - | chr4.3:41582128-41582147 | None:intergenic | 25.0% |
| ! | ATCTTTATACTGTCACAAAA+TGG | + | chr4.3:41578835-41578854 | MS.gene053997:intron | 25.0% |
| ! | CAATTTGTATTTCTTGATGA+TGG | + | chr4.3:41578747-41578766 | MS.gene053997:intron | 25.0% |
| ! | CTAACTGTAGAATTCTTAAA+AGG | + | chr4.3:41578402-41578421 | MS.gene053997:CDS | 25.0% |
| ! | GCATAAAACATTGAGAATTA+GGG | - | chr4.3:41579508-41579527 | None:intergenic | 25.0% |
| ! | GTTAAGAAATTTGGAAAGAT+TGG | + | chr4.3:41578474-41578493 | MS.gene053997:CDS | 25.0% |
| ! | TACATACAAACAAACATAGA+GGG | - | chr4.3:41582127-41582146 | None:intergenic | 25.0% |
| ! | TCTTTATACTGTCACAAAAT+GGG | + | chr4.3:41578836-41578855 | MS.gene053997:intron | 25.0% |
| ! | TTGTAAAAAAGTAACTCTCA+AGG | - | chr4.3:41581632-41581651 | None:intergenic | 25.0% |
| ! | TTTCTTGACTACAAATAATC+TGG | + | chr4.3:41581971-41581990 | MS.gene053997:intron | 25.0% |
| !! | CAGATATTTACTACACTTTT+TGG | + | chr4.3:41582344-41582363 | MS.gene053997:CDS | 25.0% |
| !! | CATGATAGTTGTTATTCAAA+AGG | - | chr4.3:41580300-41580319 | None:intergenic | 25.0% |
| !! | TAATTCTCAATGTTTTATGC+TGG | + | chr4.3:41579508-41579527 | MS.gene053997:intron | 25.0% |
| !! | TAGTTTAGAACTAAGAATGT+AGG | + | chr4.3:41578876-41578895 | MS.gene053997:intron | 25.0% |
| !! | TCTAATTCAATTTGCTTTCT+GGG | + | chr4.3:41582150-41582169 | MS.gene053997:intron | 25.0% |
| !! | TTGAATTTGCGTTTGAAATT+AGG | + | chr4.3:41579925-41579944 | MS.gene053997:intron | 25.0% |
| !!! | CTGCAATATAAATTTTTTGG+AGG | - | chr4.3:41579310-41579329 | None:intergenic | 25.0% |
| !!! | GTATGTATGGTTTTAAATTG+TGG | + | chr4.3:41578795-41578814 | MS.gene053997:intron | 25.0% |
| !!! | TGGCTGCAATATAAATTTTT+TGG | - | chr4.3:41579313-41579332 | None:intergenic | 25.0% |
| AAAAATACTTGCTTCTCAAG+TGG | - | chr4.3:41579686-41579705 | None:intergenic | 30.0% | |
| AAAATACTTGCTTCTCAAGT+GGG | - | chr4.3:41579685-41579704 | None:intergenic | 30.0% | |
| ACAAAAGGAATGTGCTTAAT+TGG | + | chr4.3:41581346-41581365 | MS.gene053997:CDS | 30.0% | |
| AGAATTAGGGTTTCAGAAAA+TGG | - | chr4.3:41579495-41579514 | None:intergenic | 30.0% | |
| ATATTATAGTTGAACCCACT+TGG | + | chr4.3:41579019-41579038 | MS.gene053997:intron | 30.0% | |
| ATGTACATAGATAGAAATGC+AGG | - | chr4.3:41580974-41580993 | None:intergenic | 30.0% | |
| CTTTATACTGTCACAAAATG+GGG | + | chr4.3:41578837-41578856 | MS.gene053997:intron | 30.0% | |
| GATGTTGTGTATTAACTTTC+AGG | + | chr4.3:41580668-41580687 | MS.gene053997:intron | 30.0% | |
| GGAATAGGTTAATGTATGTA+TGG | + | chr4.3:41578782-41578801 | MS.gene053997:intron | 30.0% | |
| TAAGAAGAGAGAAATATGAC+AGG | - | chr4.3:41581680-41581699 | None:intergenic | 30.0% | |
| TATTAGGAATAGGTCAATGT+AGG | + | chr4.3:41579199-41579218 | MS.gene053997:intron | 30.0% | |
| TGCAGAAACGAAAATACAAA+AGG | + | chr4.3:41581331-41581350 | MS.gene053997:CDS | 30.0% | |
| TGGATGCTGATAAGAATTTA+TGG | + | chr4.3:41581023-41581042 | MS.gene053997:intron | 30.0% | |
| TTAGTCAACATGTCCATATA+TGG | + | chr4.3:41580938-41580957 | MS.gene053997:intron | 30.0% | |
| TTGTCATCAAAGGATCATAT+GGG | - | chr4.3:41580721-41580740 | None:intergenic | 30.0% | |
| TTGTTCAACAATTTCTCACA+AGG | - | chr4.3:41578516-41578535 | None:intergenic | 30.0% | |
| TTGTTGAGACATTATGAGTA+GGG | + | chr4.3:41579449-41579468 | MS.gene053997:intron | 30.0% | |
| TTTAACCGTCCAATCTTAAT+AGG | - | chr4.3:41581859-41581878 | None:intergenic | 30.0% | |
| TTTACCAAGCTTAAATCAGA+CGG | + | chr4.3:41581917-41581936 | MS.gene053997:intron | 30.0% | |
| TTTGTCATCAAAGGATCATA+TGG | - | chr4.3:41580722-41580741 | None:intergenic | 30.0% | |
| ! | ACTTGTTTAGAGTGAGTTAA+CGG | + | chr4.3:41580396-41580415 | MS.gene053997:intron | 30.0% |
| ! | CTCTAATTCAATTTGCTTTC+TGG | + | chr4.3:41582149-41582168 | MS.gene053997:intron | 30.0% |
| ! | GTTGTTATTCAAAAGGTAAG+TGG | - | chr4.3:41580293-41580312 | None:intergenic | 30.0% |
| ! | TGGGTTTTTGTATTAGGAAT+AGG | + | chr4.3:41578767-41578786 | MS.gene053997:intron | 30.0% |
| !! | ATGAAGCACTGAAATATACA+CGG | - | chr4.3:41580609-41580628 | None:intergenic | 30.0% |
| !!! | ATCACCCATGTTTCTTTTTT+TGG | + | chr4.3:41578638-41578657 | MS.gene053997:intron | 30.0% |
| !!! | TCTTGTATTGTGTTTTTAGG+TGG | + | chr4.3:41579546-41579565 | MS.gene053997:intron | 30.0% |
| !!! | TGAATGCAGGTTTTAAATTG+AGG | + | chr4.3:41579365-41579384 | MS.gene053997:intron | 30.0% |
| !!! | TGATGATGGGTTTTTGTATT+AGG | + | chr4.3:41578761-41578780 | MS.gene053997:intron | 30.0% |
| AAATACTTGCTTCTCAAGTG+GGG | - | chr4.3:41579684-41579703 | None:intergenic | 35.0% | |
| AATACAATCCCTCAAAACCA+GGG | - | chr4.3:41579183-41579202 | None:intergenic | 35.0% | |
| AATACCTGGTTGACATGATT+TGG | + | chr4.3:41579610-41579629 | MS.gene053997:intron | 35.0% | |
| AATTACAGAACCCAACTCAA+TGG | + | chr4.3:41581051-41581070 | MS.gene053997:intron | 35.0% | |
| AATTAGCTGAACCATTGAGT+TGG | - | chr4.3:41581065-41581084 | None:intergenic | 35.0% | |
| ACAGTCCTATTAAGATTGGA+CGG | + | chr4.3:41581851-41581870 | MS.gene053997:intron | 35.0% | |
| ACATAGATAGAAATGCAGGA+TGG | - | chr4.3:41580970-41580989 | None:intergenic | 35.0% | |
| AGGATGGTATAAGCCATATA+TGG | - | chr4.3:41580954-41580973 | None:intergenic | 35.0% | |
| ATCAGCGAAGTTTCTTATCA+GGG | + | chr4.3:41580837-41580856 | MS.gene053997:CDS | 35.0% | |
| ATCAGTGAATCTTTAACACC+AGG | - | chr4.3:41579955-41579974 | None:intergenic | 35.0% | |
| ATCCAATCTATGAGGATTTC+TGG | + | chr4.3:41581202-41581221 | MS.gene053997:CDS | 35.0% | |
| ATGTGAAATGGCCTTCATAT+GGG | - | chr4.3:41582295-41582314 | None:intergenic | 35.0% | |
| ATTAGCTGAACCATTGAGTT+GGG | - | chr4.3:41581064-41581083 | None:intergenic | 35.0% | |
| ATTCATAAACCCCCCAAAAA+AGG | - | chr4.3:41578957-41578976 | None:intergenic | 35.0% | |
| ATTGCAGTACAATTGTTGAC+AGG | + | chr4.3:41582190-41582209 | MS.gene053997:intron | 35.0% | |
| CAGATCACTTATATGCTGTT+TGG | - | chr4.3:41580645-41580664 | None:intergenic | 35.0% | |
| CTGCAAATTAGAGCAAAATG+TGG | + | chr4.3:41579242-41579261 | MS.gene053997:intron | 35.0% | |
| GAGCAAAATGTGGATAAATG+AGG | + | chr4.3:41579252-41579271 | MS.gene053997:intron | 35.0% | |
| GATTCACTGATGGAAGAATT+TGG | + | chr4.3:41579964-41579983 | MS.gene053997:CDS | 35.0% | |
| GTCTTTATCTCTTGGAAAGA+GGG | + | chr4.3:41580886-41580905 | MS.gene053997:CDS | 35.0% | |
| GTGTAAGAGAGTTCATGATT+GGG | + | chr4.3:41578370-41578389 | MS.gene053997:CDS | 35.0% | |
| GTGTAGTAAATATCTGTCTG+TGG | - | chr4.3:41582340-41582359 | None:intergenic | 35.0% | |
| GTTATGAAAATGCATGCAGA+AGG | - | chr4.3:41581460-41581479 | None:intergenic | 35.0% | |
| GTTGTTGAGACATTATGAGT+AGG | + | chr4.3:41579448-41579467 | MS.gene053997:intron | 35.0% | |
| GTTTCTTTACTTGCTTTCTC+AGG | + | chr4.3:41578606-41578625 | MS.gene053997:CDS | 35.0% | |
| TAATACAATCCCTCAAAACC+AGG | - | chr4.3:41579184-41579203 | None:intergenic | 35.0% | |
| TAGAAGAAACCAAGAAGTCT+AGG | - | chr4.3:41580818-41580837 | None:intergenic | 35.0% | |
| TATCAGCATCCATCTAACTA+GGG | - | chr4.3:41581015-41581034 | None:intergenic | 35.0% | |
| TATCAGCGAAGTTTCTTATC+AGG | + | chr4.3:41580836-41580855 | MS.gene053997:CDS | 35.0% | |
| TATGTGAAATGGCCTTCATA+TGG | - | chr4.3:41582296-41582315 | None:intergenic | 35.0% | |
| TCAACAATGCCTCAAACTAA+GGG | - | chr4.3:41579894-41579913 | None:intergenic | 35.0% | |
| TGAGGGATTGTATTAGGAAT+AGG | + | chr4.3:41579189-41579208 | MS.gene053997:intron | 35.0% | |
| TGCACAAAATCAGTCATTGA+CGG | - | chr4.3:41582239-41582258 | None:intergenic | 35.0% | |
| TGTAAGAGAGTTCATGATTG+GGG | + | chr4.3:41578371-41578390 | MS.gene053997:CDS | 35.0% | |
| TGTCTTTATCTCTTGGAAAG+AGG | + | chr4.3:41580885-41580904 | MS.gene053997:CDS | 35.0% | |
| TGTGTAAGAGAGTTCATGAT+TGG | + | chr4.3:41578369-41578388 | MS.gene053997:CDS | 35.0% | |
| TTAATACCTGCAAGTCTATC+AGG | - | chr4.3:41580171-41580190 | None:intergenic | 35.0% | |
| TTATCAGCATCCATCTAACT+AGG | - | chr4.3:41581016-41581035 | None:intergenic | 35.0% | |
| TTCAACAATGCCTCAAACTA+AGG | - | chr4.3:41579895-41579914 | None:intergenic | 35.0% | |
| TTGATTACTTATGATCTGCC+TGG | + | chr4.3:41579994-41580013 | MS.gene053997:CDS | 35.0% | |
| TTGCAGTACAATTGTTGACA+GGG | + | chr4.3:41582191-41582210 | MS.gene053997:intron | 35.0% | |
| TTGTGTCACATCAATAGAAC+AGG | + | chr4.3:41580450-41580469 | MS.gene053997:intron | 35.0% | |
| ! | AAAAGAATTTTACACCGCTG+AGG | - | chr4.3:41581740-41581759 | None:intergenic | 35.0% |
| ! | AAAGAATTTTACACCGCTGA+GGG | - | chr4.3:41581739-41581758 | None:intergenic | 35.0% |
| ! | ATTTTCGTTTCTGCAACTTG+AGG | - | chr4.3:41581326-41581345 | None:intergenic | 35.0% |
| ! | CGTTTGAAATTAGGAATTCC+TGG | + | chr4.3:41579934-41579953 | MS.gene053997:intron | 35.0% |
| ! | CTACTTCTAAAGAAATGCTG+AGG | - | chr4.3:41582391-41582410 | None:intergenic | 35.0% |
| ! | GAATGTGCTTAATTGGCTTA+AGG | + | chr4.3:41581353-41581372 | MS.gene053997:CDS | 35.0% |
| ! | GATGGTAATGAGTGGATTTA+TGG | - | chr4.3:41581705-41581724 | None:intergenic | 35.0% |
| ! | GTGGCATTGAAGTTAAACAT+GGG | - | chr4.3:41578928-41578947 | None:intergenic | 35.0% |
| ! | TGGTGTTAAAGATTCACTGA+TGG | + | chr4.3:41579954-41579973 | MS.gene053997:CDS | 35.0% |
| ! | TGTGGCATTGAAGTTAAACA+TGG | - | chr4.3:41578929-41578948 | None:intergenic | 35.0% |
| ! | TTTACAAAAGTTGGTTCCGA+GGG | + | chr4.3:41581106-41581125 | MS.gene053997:intron | 35.0% |
| !!! | ATGCCACATGTTTCCTTTTT+TGG | + | chr4.3:41578941-41578960 | MS.gene053997:intron | 35.0% |
| !!! | GTTGACAAGTTTTGGATCAT+TGG | + | chr4.3:41580099-41580118 | MS.gene053997:CDS | 35.0% |
| !!! | TGCCACATGTTTCCTTTTTT+GGG | + | chr4.3:41578942-41578961 | MS.gene053997:intron | 35.0% |
| !!! | TGGTTTTGAGGGATTGTATT+AGG | + | chr4.3:41579183-41579202 | MS.gene053997:intron | 35.0% |
| AAATGTGAAACCCTTTGTGG+AGG | + | chr4.3:41581257-41581276 | MS.gene053997:CDS | 40.0% | |
| AAATTGTAGTTGTGATGCCG+AGG | + | chr4.3:41579278-41579297 | MS.gene053997:intron | 40.0% | |
| ACAAAATCAGTCATTGACGG+GGG | - | chr4.3:41582236-41582255 | None:intergenic | 40.0% | |
| ACAGTCTACAACTGCAATTG+TGG | - | chr4.3:41579333-41579352 | None:intergenic | 40.0% | |
| AGGAAATGTGAAACCCTTTG+TGG | + | chr4.3:41581254-41581273 | MS.gene053997:CDS | 40.0% | |
| AGTTTCTTATCAGGGAAGCA+TGG | + | chr4.3:41580845-41580864 | MS.gene053997:CDS | 40.0% | |
| ATAAAGACCCACTTCATGCT+TGG | + | chr4.3:41578568-41578587 | MS.gene053997:CDS | 40.0% | |
| ATAGTTGAACCCACTTGGAT+TGG | + | chr4.3:41579024-41579043 | MS.gene053997:intron | 40.0% | |
| ATCAACCACTAAAGTCAGAC+AGG | - | chr4.3:41579402-41579421 | None:intergenic | 40.0% | |
| ATGACAAACCAAGCATGAAG+TGG | - | chr4.3:41578579-41578598 | None:intergenic | 40.0% | |
| CAAGAAGTAGTAGCAAGTAG+TGG | + | chr4.3:41582449-41582468 | MS.gene053997:CDS | 40.0% | |
| CAATCTTAATAGGACTGTCC+AGG | - | chr4.3:41581849-41581868 | None:intergenic | 40.0% | |
| CACAAAATCAGTCATTGACG+GGG | - | chr4.3:41582237-41582256 | None:intergenic | 40.0% | |
| CCACAATGTGAATGCAATTG+AGG | - | chr4.3:41579429-41579448 | None:intergenic | 40.0% | |
| CCTCAATTGCATTCACATTG+TGG | + | chr4.3:41579426-41579445 | MS.gene053997:intron | 40.0% | |
| CGGCATCACAACTACAATTT+GGG | - | chr4.3:41579278-41579297 | None:intergenic | 40.0% | |
| CTCACTTGCCATATGTGTAT+TGG | - | chr4.3:41581420-41581439 | None:intergenic | 40.0% | |
| CTCATACTTTCCTTTCCTCT+CGG | + | chr4.3:41579810-41579829 | MS.gene053997:CDS | 40.0% | |
| CTCTCTTCGTTTGTCATCAA+AGG | - | chr4.3:41580731-41580750 | None:intergenic | 40.0% | |
| CTGGACAGTCCTATTAAGAT+TGG | + | chr4.3:41581847-41581866 | MS.gene053997:intron | 40.0% | |
| GACGATTCCAGATTTCGTTT+GGG | - | chr4.3:41580042-41580061 | None:intergenic | 40.0% | |
| GATGGAAGATCCAATCTATG+AGG | + | chr4.3:41581194-41581213 | MS.gene053997:CDS | 40.0% | |
| GATTATCCCCATGCCAAATT+CGG | + | chr4.3:41579102-41579121 | MS.gene053997:intron | 40.0% | |
| GCACAAAATCAGTCATTGAC+GGG | - | chr4.3:41582238-41582257 | None:intergenic | 40.0% | |
| GGGATGTGGAAGAATCAATT+AGG | + | chr4.3:41581229-41581248 | MS.gene053997:CDS | 40.0% | |
| GTACAATTGTTGACAGGGAA+TGG | + | chr4.3:41582196-41582215 | MS.gene053997:intron | 40.0% | |
| GTACACAAACTCCCATATGA+AGG | + | chr4.3:41582281-41582300 | MS.gene053997:CDS | 40.0% | |
| GTGGAAGAATCAATTAGGCA+AGG | + | chr4.3:41581234-41581253 | MS.gene053997:CDS | 40.0% | |
| TAAATCAGACGGTCTGCATT+TGG | + | chr4.3:41581928-41581947 | MS.gene053997:intron | 40.0% | |
| TACATACCTGATAGACTTGC+AGG | + | chr4.3:41580162-41580181 | MS.gene053997:CDS | 40.0% | |
| TATCTCTTGGAAAGAGGGTA+AGG | + | chr4.3:41580891-41580910 | MS.gene053997:intron | 40.0% | |
| TATGCCATGTATCTTCCATC+CGG | - | chr4.3:41579740-41579759 | None:intergenic | 40.0% | |
| TCAACCAAATCATGTCAACC+AGG | - | chr4.3:41579617-41579636 | None:intergenic | 40.0% | |
| TCAACCACTAAAGTCAGACA+GGG | - | chr4.3:41579401-41579420 | None:intergenic | 40.0% | |
| TCAGTGAGAATAAGTGTGTC+TGG | + | chr4.3:41580478-41580497 | MS.gene053997:intron | 40.0% | |
| TCAGTGCTTTGTCCTGAAAA+AGG | - | chr4.3:41581176-41581195 | None:intergenic | 40.0% | |
| TCGGCATCACAACTACAATT+TGG | - | chr4.3:41579279-41579298 | None:intergenic | 40.0% | |
| TCGTGTTAACCCTAGTTAGA+TGG | + | chr4.3:41581003-41581022 | MS.gene053997:intron | 40.0% | |
| TCTGCAACTTGAGGTCTAAA+AGG | - | chr4.3:41581317-41581336 | None:intergenic | 40.0% | |
| TGAAGTGGGTCTTTATCTTC+AGG | - | chr4.3:41578564-41578583 | None:intergenic | 40.0% | |
| TGAATTCAATTGACCTTCCC+TGG | + | chr4.3:41579163-41579182 | MS.gene053997:intron | 40.0% | |
| TGACAAACCAAGCATGAAGT+GGG | - | chr4.3:41578578-41578597 | None:intergenic | 40.0% | |
| TGACGATTCCAGATTTCGTT+TGG | - | chr4.3:41580043-41580062 | None:intergenic | 40.0% | |
| TGAGACATTATGAGTAGGGT+CGG | + | chr4.3:41579453-41579472 | MS.gene053997:intron | 40.0% | |
| TGCCAGAAATCCTCATAGAT+TGG | - | chr4.3:41581207-41581226 | None:intergenic | 40.0% | |
| TGGAAGATACATGGCATACA+AGG | + | chr4.3:41579742-41579761 | MS.gene053997:CDS | 40.0% | |
| TTCTCGGTCCAATACACATA+TGG | + | chr4.3:41581409-41581428 | MS.gene053997:CDS | 40.0% | |
| ! | ACTGAAACTCAGGAGTATAC+GGG | + | chr4.3:41581384-41581403 | MS.gene053997:CDS | 40.0% |
| ! | ACTTATGATCTGCCTGGTTT+TGG | + | chr4.3:41580000-41580019 | MS.gene053997:CDS | 40.0% |
| ! | AGAAGCATACAGCTCAATTG+AGG | + | chr4.3:41581775-41581794 | MS.gene053997:intron | 40.0% |
| ! | ATACAAGGAGCAAGGTGTTT+CGG | + | chr4.3:41579757-41579776 | MS.gene053997:CDS | 40.0% |
| ! | CACTGAAACTCAGGAGTATA+CGG | + | chr4.3:41581383-41581402 | MS.gene053997:CDS | 40.0% |
| ! | CAGATCTCATTGCCTTTTTC+AGG | + | chr4.3:41581161-41581180 | MS.gene053997:intron | 40.0% |
| ! | GGCAATTTTCACTGAAACTC+AGG | + | chr4.3:41581374-41581393 | MS.gene053997:CDS | 40.0% |
| ! | GTTTACAAAAGTTGGTTCCG+AGG | + | chr4.3:41581105-41581124 | MS.gene053997:intron | 40.0% |
| ! | TGGATCATTGGTTACTCAAG+TGG | + | chr4.3:41580111-41580130 | MS.gene053997:CDS | 40.0% |
| ! | TGGTGATTATGCCACTGATT+AGG | + | chr4.3:41582469-41582488 | MS.gene053997:CDS | 40.0% |
| ! | TTGCTGTTCAAGTTCAACGT+TGG | - | chr4.3:41582432-41582451 | None:intergenic | 40.0% |
| ! | TTGTTTCCACCCTTAGTTTG+AGG | + | chr4.3:41579882-41579901 | MS.gene053997:intron | 40.0% |
| !! | AAGTTCAACGTTGGCTTCTA+GGG | - | chr4.3:41582423-41582442 | None:intergenic | 40.0% |
| !! | CTATGAGGATTTCTGGCAAA+GGG | + | chr4.3:41581209-41581228 | MS.gene053997:CDS | 40.0% |
| !! | TCTATGAGGATTTCTGGCAA+AGG | + | chr4.3:41581208-41581227 | MS.gene053997:CDS | 40.0% |
| !!! | CACATGTTTCCTTTTTTGGG+GGG | + | chr4.3:41578945-41578964 | MS.gene053997:intron | 40.0% |
| !!! | CCACATGTTTCCTTTTTTGG+GGG | + | chr4.3:41578944-41578963 | MS.gene053997:intron | 40.0% |
| !!! | CTCTTGGTGTTGACAAGTTT+TGG | + | chr4.3:41580091-41580110 | MS.gene053997:CDS | 40.0% |
| !!! | GCCACATGTTTCCTTTTTTG+GGG | + | chr4.3:41578943-41578962 | MS.gene053997:intron | 40.0% |
| !!! | TCGTTTTTAGCTGATGCTCT+TGG | + | chr4.3:41580075-41580094 | MS.gene053997:CDS | 40.0% |
| !!! | TTTTCAGGACAAAGCACTGA+TGG | + | chr4.3:41581176-41581195 | MS.gene053997:intron | 40.0% |
| !!! | TTTTTTGGAGGTCTTCACCT+CGG | - | chr4.3:41579298-41579317 | None:intergenic | 40.0% |
| AAAGAAATGCTGAGGCTGAG+AGG | - | chr4.3:41582383-41582402 | None:intergenic | 45.0% | |
| AAAGCAGCTTCCTCCACAAA+GGG | - | chr4.3:41581270-41581289 | None:intergenic | 45.0% | |
| AAGAAATGCTGAGGCTGAGA+GGG | - | chr4.3:41582382-41582401 | None:intergenic | 45.0% | |
| AAGTGGAAGCAAGCATGCTT+GGG | + | chr4.3:41580128-41580147 | MS.gene053997:CDS | 45.0% | |
| ACAATGCCTCAAACTAAGGG+TGG | - | chr4.3:41579891-41579910 | None:intergenic | 45.0% | |
| ACAGGGAATGGATGACAAAG+TGG | + | chr4.3:41582208-41582227 | MS.gene053997:intron | 45.0% | |
| AGGATCATATGGGTTCACCA+TGG | - | chr4.3:41580711-41580730 | None:intergenic | 45.0% | |
| AGGTGGCTGTCTTTATCTCT+TGG | + | chr4.3:41580878-41580897 | MS.gene053997:CDS | 45.0% | |
| ATCATATGGGTTCACCATGG+GGG | - | chr4.3:41580708-41580727 | None:intergenic | 45.0% | |
| ATCTCGATTCTCTGCTGTCA+GGG | + | chr4.3:41581798-41581817 | MS.gene053997:intron | 45.0% | |
| ATTATGAGTAGGGTCGGTCT+AGG | + | chr4.3:41579459-41579478 | MS.gene053997:intron | 45.0% | |
| CAACCACTAAAGTCAGACAG+GGG | - | chr4.3:41579400-41579419 | None:intergenic | 45.0% | |
| CAGACCGTCTGATTTAAGCT+TGG | - | chr4.3:41581924-41581943 | None:intergenic | 45.0% | |
| CCCCCAAAAAAGGAAACATG+TGG | - | chr4.3:41578947-41578966 | None:intergenic | 45.0% | |
| CGAAGCTTTCCTAGACTTCT+TGG | + | chr4.3:41580806-41580825 | MS.gene053997:CDS | 45.0% | |
| GACGAAGAACCTGGAACAAA+TGG | + | chr4.3:41580750-41580769 | MS.gene053997:CDS | 45.0% | |
| GATCATATGGGTTCACCATG+GGG | - | chr4.3:41580709-41580728 | None:intergenic | 45.0% | |
| GGAATAGGTCAATGTAGGCA+TGG | + | chr4.3:41579204-41579223 | MS.gene053997:intron | 45.0% | |
| GGATCATATGGGTTCACCAT+GGG | - | chr4.3:41580710-41580729 | None:intergenic | 45.0% | |
| TACATGGCATACAAGGAGCA+AGG | + | chr4.3:41579749-41579768 | MS.gene053997:CDS | 45.0% | |
| TCCTCATCCCAAACGAAATC+TGG | + | chr4.3:41580032-41580051 | MS.gene053997:CDS | 45.0% | |
| TGCTTTGCAGGTCTCGAATT+GGG | + | chr4.3:41581284-41581303 | MS.gene053997:CDS | 45.0% | |
| ! | AATTTTACACCGCTGAGGGA+AGG | - | chr4.3:41581735-41581754 | None:intergenic | 45.0% |
| ! | ATTTTACACCGCTGAGGGAA+GGG | - | chr4.3:41581734-41581753 | None:intergenic | 45.0% |
| ! | CAGGAGTATACGGGATTTCT+CGG | + | chr4.3:41581393-41581412 | MS.gene053997:CDS | 45.0% |
| ! | CGAGAGGAAAGGAAAGTATG+AGG | - | chr4.3:41579812-41579831 | None:intergenic | 45.0% |
| ! | TAGCTAGTCTGCTCAATACC+TGG | + | chr4.3:41579596-41579615 | MS.gene053997:intron | 45.0% |
| ! | TCCAGATTTCGTTTGGGATG+AGG | - | chr4.3:41580036-41580055 | None:intergenic | 45.0% |
| ! | TTCCATCCGGAAGCATAATG+CGG | - | chr4.3:41579727-41579746 | None:intergenic | 45.0% |
| ! | TTTTCGCGTCCATTTGTTCC+AGG | - | chr4.3:41580762-41580781 | None:intergenic | 45.0% |
| !! | ACGTTGGCTTCTAGGGTAAT+TGG | - | chr4.3:41582416-41582435 | None:intergenic | 45.0% |
| !! | CAAGTTCAACGTTGGCTTCT+AGG | - | chr4.3:41582424-41582443 | None:intergenic | 45.0% |
| !!! | ATTGACCTTCCCTGGTTTTG+AGG | + | chr4.3:41579171-41579190 | MS.gene053997:intron | 45.0% |
| !!! | TTGACCTTCCCTGGTTTTGA+GGG | + | chr4.3:41579172-41579191 | MS.gene053997:intron | 45.0% |
| !!! | TATTTTTTTTTTTTAAGTTA+TGG | + | chr4.3:41578985-41579004 | MS.gene053997:intron | 5.0% |
| ACGAAGAGAGACGAAGAACC+TGG | + | chr4.3:41580741-41580760 | MS.gene053997:CDS | 50.0% | |
| AGCATGGTCAGATTGACAGG+TGG | + | chr4.3:41580861-41580880 | MS.gene053997:CDS | 50.0% | |
| AGGTCAAAAGCCAACACCAC+CGG | - | chr4.3:41579051-41579070 | None:intergenic | 50.0% | |
| AGTTTGTGTACTGCAGCTCC+AGG | - | chr4.3:41582272-41582291 | None:intergenic | 50.0% | |
| ATAATGCGGGTAGCACTAGC+AGG | - | chr4.3:41579713-41579732 | None:intergenic | 50.0% | |
| ATCCCCATGCCAAATTCGGT+GGG | + | chr4.3:41579106-41579125 | MS.gene053997:intron | 50.0% | |
| CAAAGCAGCTTCCTCCACAA+AGG | - | chr4.3:41581271-41581290 | None:intergenic | 50.0% | |
| CAAGTGGAAGCAAGCATGCT+TGG | + | chr4.3:41580127-41580146 | MS.gene053997:CDS | 50.0% | |
| CAATCCCTCAAAACCAGGGA+AGG | - | chr4.3:41579179-41579198 | None:intergenic | 50.0% | |
| CCAAACTAGCCCACCGAATT+TGG | - | chr4.3:41579118-41579137 | None:intergenic | 50.0% | |
| CTGCTTTGCAGGTCTCGAAT+TGG | + | chr4.3:41581283-41581302 | MS.gene053997:CDS | 50.0% | |
| GATCTCGATTCTCTGCTGTC+AGG | + | chr4.3:41581797-41581816 | MS.gene053997:intron | 50.0% | |
| GCTTCCGGATGGAAGATACA+TGG | + | chr4.3:41579733-41579752 | MS.gene053997:CDS | 50.0% | |
| GCTTTGCAGGTCTCGAATTG+GGG | + | chr4.3:41581285-41581304 | MS.gene053997:CDS | 50.0% | |
| TAGCCCACCGAATTTGGCAT+GGG | - | chr4.3:41579112-41579131 | None:intergenic | 50.0% | |
| TATCCCCATGCCAAATTCGG+TGG | + | chr4.3:41579105-41579124 | MS.gene053997:intron | 50.0% | |
| TCATGTGCGTGAGCGATAGA+GGG | - | chr4.3:41581999-41582018 | None:intergenic | 50.0% | |
| TGACACTGACACGTAGAGAC+CGG | - | chr4.3:41580571-41580590 | None:intergenic | 50.0% | |
| TGCTACCCGCATTATGCTTC+CGG | + | chr4.3:41579718-41579737 | MS.gene053997:CDS | 50.0% | |
| TGTCAGTGTCATGTCGTGTC+TGG | + | chr4.3:41580580-41580599 | MS.gene053997:intron | 50.0% | |
| TTCATGTGCGTGAGCGATAG+AGG | - | chr4.3:41582000-41582019 | None:intergenic | 50.0% | |
| TTTGTGCATCGCGTACTACC+TGG | + | chr4.3:41582251-41582270 | MS.gene053997:CDS | 50.0% | |
| ! | AAAGTTGGTTCCGAGGGCAT+AGG | + | chr4.3:41581112-41581131 | MS.gene053997:intron | 50.0% |
| ! | GGAAGCATGGTCAGATTGAC+AGG | + | chr4.3:41580858-41580877 | MS.gene053997:CDS | 50.0% |
| ! | GGGAAGGAGATGGTAATGAG+TGG | - | chr4.3:41581713-41581732 | None:intergenic | 50.0% |
| ! | TCCATCCGGAAGCATAATGC+GGG | - | chr4.3:41579726-41579745 | None:intergenic | 50.0% |
| ! | TTTTACACCGCTGAGGGAAG+GGG | - | chr4.3:41581733-41581752 | None:intergenic | 50.0% |
| !! | CCAAATTCGGTGGGCTAGTT+TGG | + | chr4.3:41579115-41579134 | MS.gene053997:intron | 50.0% |
| !! | GGATTTCTGGCAAAGGGATG+TGG | + | chr4.3:41581215-41581234 | MS.gene053997:CDS | 50.0% |
| !! | TGAACCCACTTGGATTGGTC+CGG | + | chr4.3:41579029-41579048 | MS.gene053997:intron | 50.0% |
| !!! | ACACTTTTTGGAACCCCGCA+AGG | + | chr4.3:41582356-41582375 | MS.gene053997:CDS | 50.0% |
| !!! | GTGGTGTTGGCTTTTGACCT+TGG | + | chr4.3:41579051-41579070 | MS.gene053997:intron | 50.0% |
| AACCTGCAAGCCGAGAGGAA+AGG | - | chr4.3:41579823-41579842 | None:intergenic | 55.0% | |
| ACCACCGGACCAATCCAAGT+GGG | - | chr4.3:41579036-41579055 | None:intergenic | 55.0% | |
| ACCCGCATTATGCTTCCGGA+TGG | + | chr4.3:41579722-41579741 | MS.gene053997:CDS | 55.0% | |
| AGCCCACCGAATTTGGCATG+GGG | - | chr4.3:41579111-41579130 | None:intergenic | 55.0% | |
| CAAACAACCTGCAAGCCGAG+AGG | - | chr4.3:41579828-41579847 | None:intergenic | 55.0% | |
| CACTAAAGTCAGACAGGGGC+AGG | - | chr4.3:41579396-41579415 | None:intergenic | 55.0% | |
| CTAGCCCACCGAATTTGGCA+TGG | - | chr4.3:41579113-41579132 | None:intergenic | 55.0% | |
| CTGCCCCTGTCTGACTTTAG+TGG | + | chr4.3:41579394-41579413 | MS.gene053997:intron | 55.0% | |
| CTTGGAGTGTGCTCTTCTCC+AGG | + | chr4.3:41579069-41579088 | MS.gene053997:intron | 55.0% | |
| CTTGGGATAGCCTATGCCCT+CGG | - | chr4.3:41581125-41581144 | None:intergenic | 55.0% | |
| GGATAATCGAACCCGAGACC+TGG | - | chr4.3:41579090-41579109 | None:intergenic | 55.0% | |
| GGATCGCTCTCACCAAAACC+AGG | - | chr4.3:41580015-41580034 | None:intergenic | 55.0% | |
| GTGTGCTCTTCTCCAGGTCT+CGG | + | chr4.3:41579075-41579094 | MS.gene053997:intron | 55.0% | |
| GTTCACCATGGGGGCAAACA+TGG | - | chr4.3:41580699-41580718 | None:intergenic | 55.0% | |
| TGTGCTCTTCTCCAGGTCTC+GGG | + | chr4.3:41579076-41579095 | MS.gene053997:intron | 55.0% | |
| ! | CTGGAGAAGAGCACACTCCA+AGG | - | chr4.3:41579071-41579090 | None:intergenic | 55.0% |
| ! | GCTTGCTAACGGCATGACCA+GGG | - | chr4.3:41581827-41581846 | None:intergenic | 55.0% |
| ! | TGTGGAGGAAGCTGCTTTGC+AGG | + | chr4.3:41581272-41581291 | MS.gene053997:CDS | 55.0% |
| ! | TTCCTTTCCTCTCGGCTTGC+AGG | + | chr4.3:41579818-41579837 | MS.gene053997:CDS | 55.0% |
| !! | GGACTGTCCAGGCTTGCTAA+CGG | - | chr4.3:41581838-41581857 | None:intergenic | 55.0% |
| !! | TTGGATTGGTCCGGTGGTGT+TGG | + | chr4.3:41579038-41579057 | MS.gene053997:intron | 55.0% |
| CACCACCGGACCAATCCAAG+TGG | - | chr4.3:41579037-41579056 | None:intergenic | 60.0% | |
| CTCTGCTGTCAGGGAATCCC+TGG | + | chr4.3:41581807-41581826 | MS.gene053997:intron | 60.0% | |
| CTGAGGGAAGGGGAAGGAGA+TGG | - | chr4.3:41581723-41581742 | None:intergenic | 60.0% | |
| GGTCATGCCGTTAGCAAGCC+TGG | + | chr4.3:41581828-41581847 | MS.gene053997:intron | 60.0% | |
| TCTCCTTCCCCTTCCCTCAG+CGG | + | chr4.3:41581723-41581742 | MS.gene053997:intron | 60.0% | |
| TGCTGCCATGTTTGCCCCCA+TGG | + | chr4.3:41580691-41580710 | MS.gene053997:CDS | 60.0% | |
| !! | ACCCACTTGGATTGGTCCGG+TGG | + | chr4.3:41579032-41579051 | MS.gene053997:intron | 60.0% |
| !! | GGCTTGCTAACGGCATGACC+AGG | - | chr4.3:41581828-41581847 | None:intergenic | 60.0% |
| ACACCGCTGAGGGAAGGGGA+AGG | - | chr4.3:41581729-41581748 | None:intergenic | 65.0% | |
| CTGAGGCTGAGAGGGCCTTG+CGG | - | chr4.3:41582374-41582393 | None:intergenic | 65.0% | |
| TGAGGCTGAGAGGGCCTTGC+GGG | - | chr4.3:41582373-41582392 | None:intergenic | 65.0% | |
| GAGGCTGAGAGGGCCTTGCG+GGG | - | chr4.3:41582372-41582391 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 41578336 | 41582490 | 41578336 | ID=MS.gene053997 |
| chr4.3 | mRNA | 41578336 | 41582490 | 41578336 | ID=MS.gene053997.t1;Parent=MS.gene053997 |
| chr4.3 | exon | 41578336 | 41578627 | 41578336 | ID=MS.gene053997.t1.exon1;Parent=MS.gene053997.t1 |
| chr4.3 | CDS | 41578336 | 41578627 | 41578336 | ID=cds.MS.gene053997.t1;Parent=MS.gene053997.t1 |
| chr4.3 | exon | 41579648 | 41579839 | 41579648 | ID=MS.gene053997.t1.exon2;Parent=MS.gene053997.t1 |
| chr4.3 | CDS | 41579648 | 41579839 | 41579648 | ID=cds.MS.gene053997.t1;Parent=MS.gene053997.t1 |
| chr4.3 | exon | 41579947 | 41580183 | 41579947 | ID=MS.gene053997.t1.exon3;Parent=MS.gene053997.t1 |
| chr4.3 | CDS | 41579947 | 41580183 | 41579947 | ID=cds.MS.gene053997.t1;Parent=MS.gene053997.t1 |
| chr4.3 | exon | 41580690 | 41580907 | 41580690 | ID=MS.gene053997.t1.exon4;Parent=MS.gene053997.t1 |
| chr4.3 | CDS | 41580690 | 41580907 | 41580690 | ID=cds.MS.gene053997.t1;Parent=MS.gene053997.t1 |
| chr4.3 | exon | 41581183 | 41581434 | 41581183 | ID=MS.gene053997.t1.exon5;Parent=MS.gene053997.t1 |
| chr4.3 | CDS | 41581183 | 41581434 | 41581183 | ID=cds.MS.gene053997.t1;Parent=MS.gene053997.t1 |
| chr4.3 | exon | 41582212 | 41582490 | 41582212 | ID=MS.gene053997.t1.exon6;Parent=MS.gene053997.t1 |
| chr4.3 | CDS | 41582212 | 41582490 | 41582212 | ID=cds.MS.gene053997.t1;Parent=MS.gene053997.t1 |
| Gene Sequence |
| Protein sequence |
