Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29828.t1 | RHN68609.1 | 82.4 | 507 | 24 | 1 | 1 | 442 | 1 | 507 | 4.40E-222 | 780.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29828.t1 | Q93Y91 | 54.0 | 502 | 162 | 4 | 1 | 433 | 1 | 502 | 3.7e-137 | 489.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29828.t1 | A0A396ISD9 | 82.4 | 507 | 24 | 1 | 1 | 442 | 1 | 507 | 3.2e-222 | 780.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29828.t1 | MTR_3g074410 | 65.226 | 509 | 110 | 5 | 1 | 442 | 1 | 509 | 0.0 | 651 |
MS.gene29828.t1 | MTR_3g074390 | 76.617 | 402 | 89 | 1 | 1 | 397 | 1 | 402 | 0.0 | 634 |
MS.gene29828.t1 | MTR_3g074390 | 66.038 | 53 | 18 | 0 | 390 | 442 | 460 | 512 | 2.90e-17 | 84.3 |
MS.gene29828.t1 | MTR_3g074380 | 77.596 | 366 | 79 | 2 | 1 | 363 | 1 | 366 | 0.0 | 584 |
MS.gene29828.t1 | MTR_3g074270 | 61.587 | 479 | 138 | 5 | 1 | 434 | 1 | 478 | 0.0 | 581 |
MS.gene29828.t1 | MTR_3g074370 | 95.755 | 212 | 9 | 0 | 186 | 397 | 19 | 230 | 2.01e-141 | 408 |
MS.gene29828.t1 | MTR_3g074340 | 95.755 | 212 | 9 | 0 | 186 | 397 | 19 | 230 | 3.58e-141 | 407 |
MS.gene29828.t1 | MTR_3g074340 | 91.837 | 49 | 4 | 0 | 394 | 442 | 292 | 340 | 6.87e-25 | 105 |
MS.gene29828.t1 | MTR_3g074320 | 94.811 | 212 | 11 | 0 | 186 | 397 | 19 | 230 | 1.16e-139 | 404 |
MS.gene29828.t1 | MTR_3g074320 | 91.837 | 49 | 4 | 0 | 394 | 442 | 292 | 340 | 6.61e-25 | 105 |
MS.gene29828.t1 | MTR_3g008160 | 51.010 | 396 | 184 | 7 | 8 | 397 | 6 | 397 | 1.60e-134 | 397 |
MS.gene29828.t1 | MTR_3g074400 | 59.773 | 353 | 108 | 5 | 50 | 401 | 1 | 320 | 3.44e-134 | 393 |
MS.gene29828.t1 | MTR_5g041550 | 49.254 | 402 | 197 | 5 | 1 | 397 | 1 | 400 | 4.07e-129 | 383 |
MS.gene29828.t1 | MTR_3g008170 | 50.503 | 398 | 189 | 6 | 5 | 397 | 4 | 398 | 3.49e-127 | 378 |
MS.gene29828.t1 | MTR_5g082540 | 47.959 | 392 | 198 | 4 | 10 | 397 | 8 | 397 | 4.43e-127 | 378 |
MS.gene29828.t1 | MTR_1g038630 | 46.617 | 399 | 209 | 3 | 1 | 397 | 1 | 397 | 1.73e-126 | 376 |
MS.gene29828.t1 | MTR_3g093010 | 50.126 | 397 | 191 | 5 | 4 | 395 | 3 | 397 | 5.82e-126 | 375 |
MS.gene29828.t1 | MTR_5g006070 | 48.969 | 388 | 189 | 6 | 15 | 397 | 14 | 397 | 9.90e-125 | 372 |
MS.gene29828.t1 | MTR_0009s0370 | 48.354 | 395 | 196 | 6 | 8 | 397 | 7 | 398 | 1.15e-122 | 366 |
MS.gene29828.t1 | MTR_4g091370 | 51.421 | 387 | 182 | 5 | 15 | 397 | 15 | 399 | 2.01e-121 | 363 |
MS.gene29828.t1 | MTR_4g090600 | 50.249 | 402 | 190 | 6 | 7 | 400 | 3 | 402 | 2.50e-119 | 358 |
MS.gene29828.t1 | MTR_0204s0020 | 45.974 | 385 | 203 | 4 | 12 | 395 | 10 | 390 | 1.59e-118 | 355 |
MS.gene29828.t1 | MTR_3g023480 | 46.392 | 388 | 201 | 5 | 15 | 397 | 13 | 398 | 6.75e-117 | 352 |
MS.gene29828.t1 | MTR_1g104780 | 46.269 | 402 | 206 | 7 | 1 | 397 | 1 | 397 | 1.35e-116 | 351 |
MS.gene29828.t1 | MTR_7g091690 | 46.392 | 388 | 199 | 5 | 1 | 383 | 1 | 384 | 6.50e-116 | 349 |
MS.gene29828.t1 | MTR_3g008160 | 50.000 | 352 | 168 | 6 | 50 | 397 | 1 | 348 | 1.14e-115 | 347 |
MS.gene29828.t1 | MTR_5g094760 | 46.649 | 388 | 198 | 5 | 1 | 383 | 1 | 384 | 1.63e-115 | 348 |
MS.gene29828.t1 | MTR_0204s0020 | 45.195 | 385 | 203 | 5 | 12 | 395 | 10 | 387 | 2.00e-114 | 345 |
MS.gene29828.t1 | MTR_1g104750 | 44.389 | 401 | 215 | 6 | 1 | 397 | 1 | 397 | 8.08e-114 | 343 |
MS.gene29828.t1 | MTR_1g104770 | 43.641 | 401 | 219 | 5 | 1 | 397 | 1 | 398 | 2.95e-113 | 342 |
MS.gene29828.t1 | MTR_0204s0040 | 42.893 | 394 | 220 | 4 | 3 | 395 | 9 | 398 | 1.11e-112 | 340 |
MS.gene29828.t1 | MTR_1g038600 | 43.577 | 397 | 206 | 4 | 1 | 397 | 1 | 379 | 3.71e-112 | 339 |
MS.gene29828.t1 | MTR_3g093060 | 48.580 | 352 | 173 | 5 | 50 | 395 | 1 | 350 | 1.09e-111 | 337 |
MS.gene29828.t1 | MTR_4g116790 | 44.875 | 361 | 196 | 3 | 3 | 362 | 7 | 365 | 2.95e-111 | 333 |
MS.gene29828.t1 | MTR_6g087040 | 47.277 | 404 | 202 | 9 | 1 | 397 | 1 | 400 | 4.51e-111 | 337 |
MS.gene29828.t1 | MTR_6g088375 | 47.277 | 404 | 202 | 9 | 1 | 397 | 1 | 400 | 4.51e-111 | 337 |
MS.gene29828.t1 | MTR_4g116790 | 43.832 | 381 | 209 | 4 | 3 | 382 | 7 | 383 | 1.28e-110 | 336 |
MS.gene29828.t1 | MTR_4g116790 | 52.273 | 44 | 21 | 0 | 395 | 438 | 461 | 504 | 8.78e-11 | 64.3 |
MS.gene29828.t1 | MTR_4g116770 | 42.893 | 394 | 220 | 4 | 3 | 395 | 205 | 594 | 1.65e-110 | 341 |
MS.gene29828.t1 | MTR_8g102860 | 46.770 | 387 | 198 | 7 | 15 | 397 | 18 | 400 | 5.77e-110 | 334 |
MS.gene29828.t1 | MTR_5g006070 | 47.592 | 353 | 176 | 6 | 50 | 397 | 1 | 349 | 1.76e-107 | 326 |
MS.gene29828.t1 | MTR_3g007910 | 46.582 | 395 | 176 | 7 | 4 | 395 | 3 | 365 | 5.46e-107 | 325 |
MS.gene29828.t1 | MTR_8g102860 | 46.875 | 352 | 179 | 7 | 50 | 397 | 1 | 348 | 1.59e-97 | 300 |
MS.gene29828.t1 | MTR_3g074330 | 92.405 | 158 | 5 | 1 | 1 | 151 | 1 | 158 | 3.55e-94 | 281 |
MS.gene29828.t1 | MTR_3g074360 | 92.405 | 158 | 5 | 1 | 1 | 151 | 1 | 158 | 3.55e-94 | 281 |
MS.gene29828.t1 | MTR_3g074310 | 91.772 | 158 | 6 | 1 | 1 | 151 | 1 | 158 | 2.40e-93 | 279 |
MS.gene29828.t1 | MTR_5g096000 | 51.685 | 178 | 68 | 1 | 4 | 181 | 3 | 162 | 6.37e-48 | 167 |
MS.gene29828.t1 | MTR_4g072030 | 30.362 | 359 | 210 | 7 | 27 | 365 | 31 | 369 | 2.61e-41 | 154 |
MS.gene29828.t1 | MTR_4g069500 | 30.556 | 360 | 209 | 7 | 27 | 365 | 34 | 373 | 5.99e-41 | 153 |
MS.gene29828.t1 | MTR_4g069500 | 32.542 | 295 | 177 | 5 | 92 | 365 | 30 | 323 | 4.07e-40 | 150 |
MS.gene29828.t1 | MTR_3g116240 | 30.471 | 361 | 210 | 10 | 27 | 365 | 32 | 373 | 3.47e-39 | 148 |
MS.gene29828.t1 | MTR_2g013310 | 30.704 | 355 | 218 | 6 | 24 | 369 | 53 | 388 | 4.07e-39 | 148 |
MS.gene29828.t1 | MTR_8g103500 | 27.577 | 359 | 222 | 7 | 18 | 361 | 13 | 348 | 1.26e-38 | 146 |
MS.gene29828.t1 | MTR_2g013310 | 32.414 | 290 | 188 | 3 | 88 | 369 | 26 | 315 | 4.64e-38 | 144 |
MS.gene29828.t1 | MTR_8g077890 | 26.598 | 485 | 246 | 13 | 28 | 425 | 24 | 485 | 1.57e-37 | 143 |
MS.gene29828.t1 | MTR_6g088450 | 30.205 | 341 | 198 | 9 | 28 | 353 | 63 | 378 | 4.97e-37 | 142 |
MS.gene29828.t1 | MTR_0064s0040 | 47.651 | 149 | 65 | 2 | 4 | 151 | 5 | 141 | 1.29e-34 | 126 |
MS.gene29828.t1 | MTR_7g446340 | 27.778 | 360 | 232 | 7 | 20 | 370 | 51 | 391 | 2.98e-34 | 134 |
MS.gene29828.t1 | MTR_6g007340 | 27.778 | 360 | 232 | 7 | 20 | 370 | 51 | 391 | 2.98e-34 | 134 |
MS.gene29828.t1 | MTR_2g049020 | 30.792 | 341 | 208 | 8 | 34 | 364 | 37 | 359 | 1.94e-33 | 132 |
MS.gene29828.t1 | MTR_2g048720 | 29.882 | 338 | 213 | 8 | 34 | 365 | 37 | 356 | 3.75e-33 | 132 |
MS.gene29828.t1 | MTR_7g082270 | 27.246 | 345 | 228 | 7 | 9 | 352 | 51 | 373 | 5.30e-32 | 127 |
MS.gene29828.t1 | MTR_7g082270 | 27.246 | 345 | 228 | 7 | 9 | 352 | 51 | 373 | 5.75e-32 | 127 |
MS.gene29828.t1 | MTR_5g075300 | 28.530 | 347 | 201 | 9 | 28 | 350 | 24 | 347 | 2.59e-31 | 125 |
MS.gene29828.t1 | MTR_6g018790 | 27.003 | 337 | 225 | 5 | 16 | 352 | 98 | 413 | 1.25e-30 | 124 |
MS.gene29828.t1 | MTR_7g094450 | 26.933 | 401 | 224 | 8 | 79 | 418 | 77 | 469 | 2.48e-30 | 122 |
MS.gene29828.t1 | MTR_8g077300 | 26.578 | 301 | 214 | 2 | 82 | 382 | 79 | 372 | 3.34e-30 | 122 |
MS.gene29828.t1 | MTR_4g077740 | 26.012 | 346 | 228 | 6 | 22 | 353 | 44 | 375 | 1.25e-29 | 120 |
MS.gene29828.t1 | MTR_8g077310 | 27.817 | 284 | 198 | 2 | 82 | 365 | 87 | 363 | 1.47e-29 | 119 |
MS.gene29828.t1 | MTR_8g077310 | 27.817 | 284 | 198 | 2 | 82 | 365 | 87 | 363 | 2.65e-29 | 120 |
MS.gene29828.t1 | MTR_3g080240 | 28.135 | 327 | 209 | 8 | 28 | 351 | 98 | 401 | 1.03e-28 | 118 |
MS.gene29828.t1 | MTR_8g077310 | 27.473 | 273 | 191 | 2 | 93 | 365 | 1 | 266 | 1.68e-28 | 116 |
MS.gene29828.t1 | MTR_7g094110 | 27.778 | 378 | 224 | 7 | 82 | 418 | 82 | 451 | 2.12e-28 | 117 |
MS.gene29828.t1 | MTR_2g026160 | 29.710 | 276 | 184 | 3 | 106 | 372 | 94 | 368 | 2.83e-28 | 117 |
MS.gene29828.t1 | MTR_5g019870 | 27.564 | 312 | 199 | 7 | 75 | 360 | 49 | 359 | 2.03e-27 | 114 |
MS.gene29828.t1 | MTR_1g022315 | 26.923 | 286 | 198 | 5 | 82 | 365 | 89 | 365 | 1.23e-26 | 112 |
MS.gene29828.t1 | MTR_7g113960 | 27.407 | 270 | 188 | 3 | 82 | 351 | 67 | 328 | 1.34e-26 | 110 |
MS.gene29828.t1 | MTR_7g113970 | 26.354 | 277 | 190 | 4 | 82 | 355 | 102 | 367 | 1.51e-26 | 111 |
MS.gene29828.t1 | MTR_7g005910 | 27.353 | 340 | 227 | 6 | 29 | 365 | 39 | 361 | 2.07e-26 | 111 |
MS.gene29828.t1 | MTR_7g113970 | 26.573 | 286 | 195 | 5 | 82 | 363 | 102 | 376 | 2.20e-26 | 111 |
MS.gene29828.t1 | MTR_7g113960 | 27.407 | 270 | 188 | 3 | 82 | 351 | 67 | 328 | 2.27e-26 | 111 |
MS.gene29828.t1 | MTR_5g020270 | 26.667 | 285 | 200 | 4 | 82 | 365 | 90 | 366 | 3.53e-26 | 110 |
MS.gene29828.t1 | MTR_2g020710 | 27.612 | 268 | 185 | 4 | 81 | 347 | 88 | 347 | 3.90e-26 | 109 |
MS.gene29828.t1 | MTR_2g020710 | 27.715 | 267 | 184 | 4 | 82 | 347 | 89 | 347 | 4.13e-26 | 110 |
MS.gene29828.t1 | MTR_2g020710 | 27.612 | 268 | 185 | 4 | 81 | 347 | 88 | 347 | 4.27e-26 | 109 |
MS.gene29828.t1 | MTR_7g094110 | 28.114 | 281 | 193 | 3 | 82 | 361 | 82 | 354 | 4.48e-26 | 110 |
MS.gene29828.t1 | MTR_1g022315 | 26.545 | 275 | 191 | 5 | 93 | 365 | 1 | 266 | 4.60e-26 | 109 |
MS.gene29828.t1 | MTR_2g020710 | 27.820 | 266 | 183 | 4 | 83 | 347 | 1 | 258 | 4.69e-26 | 109 |
MS.gene29828.t1 | MTR_2g020710 | 27.612 | 268 | 185 | 4 | 81 | 347 | 88 | 347 | 7.31e-26 | 110 |
MS.gene29828.t1 | MTR_4g064820 | 26.741 | 359 | 234 | 8 | 22 | 363 | 95 | 441 | 1.11e-25 | 109 |
MS.gene29828.t1 | MTR_5g020270 | 26.277 | 274 | 193 | 4 | 93 | 365 | 1 | 266 | 2.14e-25 | 107 |
MS.gene29828.t1 | MTR_3g084110 | 25.197 | 381 | 248 | 9 | 34 | 408 | 39 | 388 | 6.73e-25 | 107 |
MS.gene29828.t1 | MTR_5g077580 | 26.593 | 361 | 193 | 7 | 34 | 349 | 37 | 370 | 7.12e-25 | 107 |
MS.gene29828.t1 | MTR_1g116660 | 26.282 | 312 | 211 | 7 | 102 | 408 | 98 | 395 | 3.83e-24 | 105 |
MS.gene29828.t1 | MTR_1g038620 | 34.375 | 160 | 86 | 3 | 201 | 360 | 50 | 190 | 6.57e-24 | 99.0 |
MS.gene29828.t1 | MTR_4g118610 | 24.907 | 269 | 193 | 4 | 82 | 349 | 92 | 352 | 1.69e-23 | 102 |
MS.gene29828.t1 | MTR_4g118610 | 24.907 | 269 | 193 | 4 | 82 | 349 | 92 | 352 | 3.53e-23 | 102 |
MS.gene29828.t1 | MTR_6g087910 | 23.954 | 263 | 185 | 3 | 92 | 349 | 102 | 354 | 7.09e-23 | 101 |
MS.gene29828.t1 | MTR_5g020270 | 26.592 | 267 | 180 | 5 | 82 | 340 | 90 | 348 | 1.85e-22 | 99.8 |
MS.gene29828.t1 | MTR_1g116650 | 28.244 | 262 | 170 | 4 | 107 | 365 | 146 | 392 | 1.86e-22 | 100 |
MS.gene29828.t1 | MTR_4g013205 | 24.159 | 327 | 220 | 5 | 28 | 351 | 41 | 342 | 2.41e-22 | 99.8 |
MS.gene29828.t1 | MTR_2g026140 | 25.937 | 347 | 217 | 8 | 29 | 365 | 30 | 346 | 1.85e-20 | 94.4 |
MS.gene29828.t1 | MTR_3g116060 | 30.409 | 171 | 116 | 3 | 90 | 258 | 52 | 221 | 2.08e-17 | 85.1 |
MS.gene29828.t1 | MTR_4g069500 | 29.348 | 184 | 108 | 5 | 202 | 365 | 3 | 184 | 1.07e-16 | 81.3 |
MS.gene29828.t1 | MTR_3g118530 | 30.409 | 171 | 116 | 3 | 90 | 258 | 54 | 223 | 2.31e-16 | 82.0 |
MS.gene29828.t1 | MTR_3g118530 | 30.409 | 171 | 116 | 3 | 90 | 258 | 54 | 223 | 4.96e-16 | 80.9 |
MS.gene29828.t1 | MTR_5g044910 | 28.902 | 173 | 120 | 3 | 83 | 253 | 47 | 218 | 1.12e-15 | 79.7 |
MS.gene29828.t1 | MTR_5g024740 | 27.119 | 236 | 150 | 7 | 21 | 253 | 2 | 218 | 2.24e-15 | 79.0 |
MS.gene29828.t1 | MTR_8g073100 | 27.933 | 179 | 126 | 3 | 77 | 253 | 41 | 218 | 2.95e-13 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29828.t1 | AT1G34580 | 61.596 | 401 | 150 | 3 | 1 | 397 | 1 | 401 | 1.01e-168 | 484 |
MS.gene29828.t1 | AT1G34580 | 68.571 | 35 | 11 | 0 | 399 | 433 | 468 | 502 | 3.35e-11 | 65.5 |
MS.gene29828.t1 | AT1G34580 | 60.399 | 351 | 136 | 2 | 50 | 397 | 1 | 351 | 2.99e-144 | 419 |
MS.gene29828.t1 | AT1G34580 | 68.571 | 35 | 11 | 0 | 399 | 433 | 418 | 452 | 4.31e-11 | 65.1 |
MS.gene29828.t1 | AT3G19930 | 51.385 | 397 | 188 | 4 | 4 | 397 | 3 | 397 | 1.45e-136 | 402 |
MS.gene29828.t1 | AT3G19930 | 51.385 | 397 | 188 | 4 | 4 | 397 | 3 | 397 | 1.45e-136 | 402 |
MS.gene29828.t1 | AT1G11260 | 51.122 | 401 | 190 | 5 | 1 | 397 | 1 | 399 | 3.37e-136 | 401 |
MS.gene29828.t1 | AT4G21480 | 51.128 | 399 | 191 | 4 | 1 | 397 | 1 | 397 | 2.31e-133 | 394 |
MS.gene29828.t1 | AT5G23270 | 50.495 | 404 | 189 | 7 | 1 | 397 | 1 | 400 | 1.56e-130 | 387 |
MS.gene29828.t1 | AT3G19940 | 49.608 | 383 | 185 | 5 | 19 | 397 | 21 | 399 | 2.40e-123 | 368 |
MS.gene29828.t1 | AT5G26340 | 47.382 | 401 | 204 | 5 | 1 | 397 | 1 | 398 | 2.70e-123 | 369 |
MS.gene29828.t1 | AT1G50310 | 49.215 | 382 | 189 | 5 | 19 | 397 | 21 | 400 | 9.89e-122 | 364 |
MS.gene29828.t1 | AT4G02050 | 46.000 | 400 | 207 | 5 | 1 | 395 | 1 | 396 | 2.11e-119 | 358 |
MS.gene29828.t1 | AT4G02050 | 46.000 | 400 | 207 | 5 | 1 | 395 | 1 | 396 | 2.11e-119 | 358 |
MS.gene29828.t1 | AT5G61520 | 46.322 | 367 | 188 | 4 | 17 | 376 | 18 | 382 | 4.71e-116 | 350 |
MS.gene29828.t1 | AT5G26250 | 46.049 | 367 | 195 | 3 | 12 | 377 | 11 | 375 | 6.11e-111 | 336 |
MS.gene29828.t1 | AT3G05960 | 44.595 | 370 | 202 | 3 | 9 | 377 | 7 | 374 | 3.13e-106 | 324 |
MS.gene29828.t1 | AT1G07340 | 43.000 | 400 | 220 | 5 | 1 | 397 | 1 | 395 | 7.35e-105 | 320 |
MS.gene29828.t1 | AT1G77210 | 43.142 | 401 | 218 | 8 | 1 | 395 | 1 | 397 | 2.29e-104 | 319 |
MS.gene29828.t1 | AT1G77210 | 43.142 | 401 | 218 | 8 | 1 | 395 | 1 | 397 | 2.29e-104 | 319 |
MS.gene29828.t1 | AT5G61520 | 45.075 | 335 | 175 | 4 | 49 | 376 | 2 | 334 | 1.18e-101 | 311 |
MS.gene29828.t1 | AT1G50310 | 46.988 | 249 | 128 | 4 | 151 | 397 | 11 | 257 | 1.92e-70 | 228 |
MS.gene29828.t1 | AT1G77210 | 39.676 | 247 | 143 | 6 | 151 | 395 | 6 | 248 | 3.49e-55 | 187 |
MS.gene29828.t1 | AT3G18830 | 30.556 | 360 | 210 | 7 | 27 | 365 | 40 | 380 | 1.57e-41 | 155 |
MS.gene29828.t1 | AT2G16120 | 30.833 | 360 | 209 | 9 | 27 | 365 | 30 | 370 | 8.19e-41 | 152 |
MS.gene29828.t1 | AT2G16130 | 31.304 | 345 | 199 | 8 | 27 | 352 | 30 | 355 | 7.03e-40 | 150 |
MS.gene29828.t1 | AT2G18480 | 30.086 | 349 | 204 | 8 | 38 | 365 | 37 | 366 | 1.38e-36 | 140 |
MS.gene29828.t1 | AT2G20780 | 27.762 | 353 | 229 | 7 | 20 | 365 | 51 | 384 | 1.18e-34 | 135 |
MS.gene29828.t1 | AT4G36670 | 28.184 | 369 | 223 | 9 | 27 | 373 | 21 | 369 | 1.75e-34 | 134 |
MS.gene29828.t1 | AT1G30220 | 31.609 | 348 | 206 | 8 | 34 | 374 | 39 | 361 | 2.29e-34 | 135 |
MS.gene29828.t1 | AT5G16150 | 28.235 | 340 | 217 | 5 | 16 | 352 | 98 | 413 | 1.21e-33 | 133 |
MS.gene29828.t1 | AT5G16150 | 28.235 | 340 | 217 | 5 | 16 | 352 | 98 | 413 | 1.21e-33 | 133 |
MS.gene29828.t1 | AT5G16150 | 28.235 | 340 | 217 | 5 | 16 | 352 | 98 | 413 | 1.21e-33 | 133 |
MS.gene29828.t1 | AT2G20780 | 28.772 | 285 | 197 | 3 | 87 | 365 | 42 | 326 | 5.37e-33 | 130 |
MS.gene29828.t1 | AT2G48020 | 27.915 | 283 | 195 | 3 | 82 | 363 | 68 | 342 | 2.69e-32 | 126 |
MS.gene29828.t1 | AT1G54730 | 29.496 | 278 | 172 | 6 | 82 | 351 | 72 | 333 | 5.64e-32 | 125 |
MS.gene29828.t1 | AT2G48020 | 27.817 | 284 | 196 | 3 | 81 | 363 | 67 | 342 | 6.15e-32 | 127 |
MS.gene29828.t1 | AT2G48020 | 27.817 | 284 | 196 | 3 | 81 | 363 | 67 | 342 | 6.15e-32 | 127 |
MS.gene29828.t1 | AT1G54730 | 29.496 | 278 | 172 | 6 | 82 | 351 | 72 | 333 | 1.18e-31 | 125 |
MS.gene29828.t1 | AT1G54730 | 29.496 | 278 | 172 | 6 | 82 | 351 | 72 | 333 | 1.18e-31 | 125 |
MS.gene29828.t1 | AT1G54730 | 29.496 | 278 | 172 | 6 | 82 | 351 | 72 | 333 | 1.32e-31 | 125 |
MS.gene29828.t1 | AT1G75220 | 27.090 | 299 | 211 | 2 | 82 | 380 | 88 | 379 | 2.03e-31 | 125 |
MS.gene29828.t1 | AT4G16480 | 30.172 | 348 | 215 | 7 | 34 | 371 | 38 | 367 | 2.27e-31 | 127 |
MS.gene29828.t1 | AT4G16480 | 30.172 | 348 | 215 | 7 | 34 | 371 | 38 | 367 | 2.27e-31 | 127 |
MS.gene29828.t1 | AT4G16480 | 30.172 | 348 | 215 | 7 | 34 | 371 | 38 | 367 | 2.27e-31 | 127 |
MS.gene29828.t1 | AT1G54730 | 29.496 | 278 | 172 | 6 | 82 | 351 | 72 | 333 | 2.74e-31 | 125 |
MS.gene29828.t1 | AT2G48020 | 27.174 | 276 | 193 | 2 | 82 | 357 | 68 | 335 | 5.79e-31 | 122 |
MS.gene29828.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 1.81e-30 | 120 |
MS.gene29828.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 1.81e-30 | 120 |
MS.gene29828.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 3.15e-30 | 121 |
MS.gene29828.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 3.74e-30 | 121 |
MS.gene29828.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 5.73e-30 | 121 |
MS.gene29828.t1 | AT5G17010 | 27.826 | 345 | 225 | 7 | 21 | 353 | 45 | 377 | 1.15e-29 | 121 |
MS.gene29828.t1 | AT5G17010 | 27.826 | 345 | 225 | 7 | 21 | 353 | 45 | 377 | 1.15e-29 | 121 |
MS.gene29828.t1 | AT5G17010 | 27.826 | 345 | 225 | 7 | 21 | 353 | 45 | 377 | 1.15e-29 | 121 |
MS.gene29828.t1 | AT3G05160 | 26.176 | 340 | 224 | 4 | 16 | 355 | 14 | 326 | 1.23e-29 | 120 |
MS.gene29828.t1 | AT3G05165 | 26.471 | 340 | 223 | 4 | 16 | 355 | 23 | 335 | 1.27e-29 | 120 |
MS.gene29828.t1 | AT3G05165 | 26.471 | 340 | 223 | 4 | 16 | 355 | 23 | 335 | 1.27e-29 | 120 |
MS.gene29828.t1 | AT1G08930 | 26.571 | 350 | 219 | 8 | 8 | 351 | 42 | 359 | 1.48e-29 | 120 |
MS.gene29828.t1 | AT1G08930 | 26.571 | 350 | 219 | 8 | 8 | 351 | 42 | 359 | 1.48e-29 | 120 |
MS.gene29828.t1 | AT3G05165 | 26.471 | 340 | 223 | 4 | 16 | 355 | 23 | 335 | 1.71e-29 | 120 |
MS.gene29828.t1 | AT3G05165 | 26.471 | 340 | 223 | 4 | 16 | 355 | 23 | 335 | 2.13e-29 | 120 |
MS.gene29828.t1 | AT3G05165 | 26.471 | 340 | 223 | 4 | 16 | 355 | 23 | 335 | 2.13e-29 | 120 |
MS.gene29828.t1 | AT3G05165 | 26.471 | 340 | 223 | 4 | 16 | 355 | 23 | 335 | 2.13e-29 | 120 |
MS.gene29828.t1 | AT1G19450 | 26.421 | 299 | 213 | 2 | 82 | 380 | 89 | 380 | 5.51e-29 | 119 |
MS.gene29828.t1 | AT3G05400 | 27.815 | 302 | 204 | 5 | 82 | 382 | 66 | 354 | 7.61e-29 | 118 |
MS.gene29828.t1 | AT3G05160 | 27.574 | 272 | 189 | 2 | 84 | 355 | 14 | 277 | 1.09e-28 | 117 |
MS.gene29828.t1 | AT3G05160 | 27.574 | 272 | 189 | 2 | 84 | 355 | 14 | 277 | 1.09e-28 | 117 |
MS.gene29828.t1 | AT1G08900 | 27.957 | 279 | 193 | 3 | 82 | 360 | 65 | 335 | 2.69e-28 | 116 |
MS.gene29828.t1 | AT1G08900 | 27.957 | 279 | 193 | 3 | 82 | 360 | 23 | 293 | 2.89e-28 | 116 |
MS.gene29828.t1 | AT3G05400 | 31.227 | 269 | 170 | 6 | 116 | 382 | 79 | 334 | 3.44e-28 | 116 |
MS.gene29828.t1 | AT1G08900 | 27.957 | 279 | 193 | 3 | 82 | 360 | 65 | 335 | 4.17e-28 | 116 |
MS.gene29828.t1 | AT1G08900 | 27.957 | 279 | 193 | 3 | 82 | 360 | 65 | 335 | 4.17e-28 | 116 |
MS.gene29828.t1 | AT1G08900 | 27.957 | 279 | 193 | 3 | 82 | 360 | 57 | 327 | 5.13e-28 | 115 |
MS.gene29828.t1 | AT5G59250 | 27.874 | 348 | 222 | 8 | 22 | 353 | 97 | 431 | 5.78e-28 | 116 |
MS.gene29828.t1 | AT2G35740 | 26.724 | 348 | 229 | 5 | 34 | 372 | 37 | 367 | 6.58e-28 | 116 |
MS.gene29828.t1 | AT1G67300 | 28.421 | 285 | 188 | 6 | 92 | 373 | 103 | 374 | 7.44e-28 | 115 |
MS.gene29828.t1 | AT1G67300 | 28.421 | 285 | 188 | 6 | 92 | 373 | 103 | 374 | 7.44e-28 | 115 |
MS.gene29828.t1 | AT1G67300 | 28.421 | 285 | 188 | 6 | 92 | 373 | 103 | 374 | 7.67e-28 | 115 |
MS.gene29828.t1 | AT1G67300 | 28.421 | 285 | 188 | 6 | 92 | 373 | 103 | 374 | 7.67e-28 | 115 |
MS.gene29828.t1 | AT1G67300 | 28.421 | 285 | 188 | 6 | 92 | 373 | 103 | 374 | 1.13e-27 | 115 |
MS.gene29828.t1 | AT1G67300 | 28.421 | 285 | 188 | 6 | 92 | 373 | 103 | 374 | 1.13e-27 | 115 |
MS.gene29828.t1 | AT1G67300 | 28.137 | 263 | 180 | 5 | 92 | 351 | 103 | 359 | 5.58e-27 | 113 |
MS.gene29828.t1 | AT4G04760 | 29.630 | 270 | 179 | 3 | 82 | 348 | 71 | 332 | 6.23e-27 | 113 |
MS.gene29828.t1 | AT4G04760 | 29.225 | 284 | 189 | 4 | 82 | 361 | 12 | 287 | 8.32e-27 | 112 |
MS.gene29828.t1 | AT5G27350 | 25.316 | 316 | 220 | 5 | 84 | 397 | 73 | 374 | 9.06e-27 | 112 |
MS.gene29828.t1 | AT4G04760 | 29.225 | 284 | 189 | 4 | 82 | 361 | 71 | 346 | 1.28e-26 | 112 |
MS.gene29828.t1 | AT3G05150 | 29.195 | 298 | 195 | 4 | 82 | 374 | 75 | 361 | 4.96e-26 | 110 |
MS.gene29828.t1 | AT3G05150 | 29.195 | 298 | 195 | 4 | 82 | 374 | 75 | 361 | 4.96e-26 | 110 |
MS.gene29828.t1 | AT3G05150 | 29.195 | 298 | 195 | 4 | 82 | 374 | 75 | 361 | 5.31e-26 | 110 |
MS.gene29828.t1 | AT1G05030 | 24.147 | 381 | 259 | 9 | 21 | 398 | 77 | 430 | 2.68e-25 | 108 |
MS.gene29828.t1 | AT3G03090 | 28.826 | 281 | 187 | 4 | 85 | 353 | 98 | 377 | 4.48e-25 | 107 |
MS.gene29828.t1 | AT1G79820 | 27.574 | 272 | 186 | 6 | 83 | 351 | 97 | 360 | 5.05e-25 | 107 |
MS.gene29828.t1 | AT5G27360 | 25.651 | 269 | 192 | 3 | 84 | 352 | 77 | 337 | 5.33e-25 | 107 |
MS.gene29828.t1 | AT1G05030 | 25.316 | 316 | 222 | 6 | 87 | 398 | 73 | 378 | 6.41e-25 | 107 |
MS.gene29828.t1 | AT5G27360 | 25.651 | 269 | 192 | 3 | 84 | 352 | 125 | 385 | 6.96e-25 | 107 |
MS.gene29828.t1 | AT5G27360 | 25.651 | 269 | 192 | 3 | 84 | 352 | 77 | 337 | 7.03e-25 | 107 |
MS.gene29828.t1 | AT4G04750 | 28.231 | 294 | 193 | 5 | 82 | 368 | 76 | 358 | 8.18e-25 | 107 |
MS.gene29828.t1 | AT4G04750 | 28.231 | 294 | 193 | 5 | 82 | 368 | 76 | 358 | 8.18e-25 | 107 |
MS.gene29828.t1 | AT3G05155 | 24.923 | 325 | 222 | 8 | 82 | 405 | 67 | 370 | 8.61e-25 | 106 |
MS.gene29828.t1 | AT1G79820 | 27.574 | 272 | 186 | 6 | 83 | 351 | 97 | 360 | 9.11e-25 | 107 |
MS.gene29828.t1 | AT1G79820 | 27.574 | 272 | 186 | 6 | 83 | 351 | 97 | 360 | 9.11e-25 | 107 |
MS.gene29828.t1 | AT4G04750 | 28.231 | 294 | 193 | 5 | 82 | 368 | 120 | 402 | 9.29e-25 | 107 |
MS.gene29828.t1 | AT1G08890 | 27.619 | 315 | 214 | 6 | 82 | 395 | 67 | 368 | 1.64e-24 | 105 |
MS.gene29828.t1 | AT3G05155 | 23.985 | 271 | 193 | 4 | 82 | 351 | 67 | 325 | 8.28e-24 | 102 |
MS.gene29828.t1 | AT3G20460 | 25.887 | 282 | 197 | 5 | 81 | 361 | 92 | 362 | 4.20e-23 | 102 |
MS.gene29828.t1 | AT2G43330 | 28.417 | 278 | 187 | 7 | 107 | 376 | 99 | 372 | 6.51e-23 | 101 |
MS.gene29828.t1 | AT5G18840 | 24.653 | 288 | 209 | 3 | 82 | 368 | 84 | 364 | 9.73e-23 | 100 |
MS.gene29828.t1 | AT5G27360 | 25.893 | 224 | 158 | 3 | 129 | 352 | 18 | 233 | 4.97e-22 | 97.4 |
MS.gene29828.t1 | AT5G27360 | 25.893 | 224 | 158 | 3 | 129 | 352 | 18 | 233 | 4.97e-22 | 97.4 |
MS.gene29828.t1 | AT1G08920 | 23.913 | 276 | 200 | 4 | 82 | 355 | 72 | 339 | 1.27e-21 | 97.4 |
MS.gene29828.t1 | AT1G08920 | 23.913 | 276 | 200 | 4 | 82 | 355 | 72 | 339 | 1.50e-21 | 97.1 |
MS.gene29828.t1 | AT1G08920 | 23.188 | 276 | 204 | 3 | 82 | 357 | 72 | 339 | 2.22e-21 | 96.7 |
MS.gene29828.t1 | AT5G17010 | 25.000 | 444 | 237 | 12 | 21 | 418 | 42 | 435 | 3.89e-21 | 95.9 |
MS.gene29828.t1 | AT3G51490 | 31.383 | 188 | 125 | 4 | 87 | 272 | 2 | 187 | 7.21e-21 | 95.9 |
MS.gene29828.t1 | AT3G51490 | 31.383 | 188 | 125 | 4 | 87 | 272 | 52 | 237 | 9.30e-21 | 95.5 |
MS.gene29828.t1 | AT3G51490 | 31.383 | 188 | 125 | 4 | 87 | 272 | 52 | 237 | 9.72e-21 | 95.5 |
MS.gene29828.t1 | AT1G20840 | 27.225 | 191 | 136 | 3 | 90 | 278 | 52 | 241 | 4.40e-17 | 84.3 |
MS.gene29828.t1 | AT1G20840 | 27.225 | 191 | 136 | 3 | 90 | 278 | 52 | 241 | 4.40e-17 | 84.3 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 7.35e-17 | 83.6 |
MS.gene29828.t1 | AT1G79820 | 26.633 | 199 | 143 | 3 | 83 | 280 | 97 | 293 | 2.18e-16 | 81.3 |
MS.gene29828.t1 | AT1G79820 | 26.752 | 157 | 112 | 3 | 125 | 280 | 77 | 231 | 5.83e-12 | 67.4 |
Find 103 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTCGTATTCTTCTTGGTTT+TGG | 0.158443 | 3.4:+72891533 | MS.gene29828:CDS |
TGGAGTCAATGTACATTATA+TGG | 0.160882 | 3.4:+72899122 | MS.gene29828:CDS |
CTTGCTGGTGCTGCTATTAA+TGG | 0.180124 | 3.4:+72891479 | MS.gene29828:CDS |
GGATATGACATTGGGATTTC+AGG | 0.189475 | 3.4:+72890732 | MS.gene29828:CDS |
TTACTTTCTGCCGTTATTCT+TGG | 0.197875 | 3.4:+72898415 | MS.gene29828:CDS |
ATTCTTGGTCGTATTCTTCT+TGG | 0.241656 | 3.4:+72891527 | MS.gene29828:CDS |
CTCTTTCAATCTGTGGGTTT+AGG | 0.277247 | 3.4:+72898379 | MS.gene29828:CDS |
TATTGGCGGCGGTTTGTTAA+AGG | 0.282193 | 3.4:+72899157 | MS.gene29828:CDS |
GGTGGTGCCATCTTTCTTGC+TGG | 0.282200 | 3.4:+72891464 | MS.gene29828:CDS |
CTCTCAAAGATGGTCATAAA+TGG | 0.284366 | 3.4:-72898265 | None:intergenic |
TTTGCAATGCTTTCCTGGCT+TGG | 0.290814 | 3.4:-72898156 | None:intergenic |
CATTCTATTGCTTGTCTGTC+TGG | 0.306011 | 3.4:+72898519 | MS.gene29828:CDS |
CTGAAATAGCTCCACCAAAA+TGG | 0.311778 | 3.4:+72897930 | MS.gene29828:CDS |
AATATTGCTATGCTCATTCT+TGG | 0.318012 | 3.4:+72891512 | MS.gene29828:CDS |
CTGAAAGCACCTCGCCATTT+TGG | 0.328065 | 3.4:-72897944 | None:intergenic |
GCACCTTCCAATGGCTTTGA+TGG | 0.330273 | 3.4:+72890648 | MS.gene29828:CDS |
CGAAGATTCTTGTTCATTAC+GGG | 0.343244 | 3.4:+72898493 | MS.gene29828:CDS |
GCATCTAGTGGACTCATTCT+TGG | 0.350307 | 3.4:+72890711 | MS.gene29828:CDS |
CGCCAACTCCTATGAAGAAT+TGG | 0.355831 | 3.4:-72897976 | None:intergenic |
TCGAAGATTCTTGTTCATTA+CGG | 0.369531 | 3.4:+72898492 | MS.gene29828:CDS |
GGAGTCAATGTACATTATAT+GGG | 0.376356 | 3.4:+72899123 | MS.gene29828:CDS |
ACAGGCTTCCAATTCTTCAT+AGG | 0.386056 | 3.4:+72897968 | MS.gene29828:CDS |
GGTGTCTGCTTTGCTAGCTT+TGG | 0.387628 | 3.4:+72898772 | MS.gene29828:CDS |
GCTGCCTTTCTTAGAATATC+CGG | 0.392951 | 3.4:-72891296 | None:intergenic |
ATTTCTCAATAAATTCTTCC+CGG | 0.399065 | 3.4:+72891277 | MS.gene29828:CDS |
GCTTTGGCGACTGGTGTTGA+TGG | 0.405109 | 3.4:+72898788 | MS.gene29828:CDS |
GGGAAGAATTTATTGAGAAA+TGG | 0.413138 | 3.4:-72891275 | None:intergenic |
TGGGGCTGGCGACTCTCTCT+TGG | 0.414296 | 3.4:+72898043 | MS.gene29828:CDS |
TTACTATGTTTCTATGCAGC+AGG | 0.416244 | 3.4:+72898854 | MS.gene29828:CDS |
TGACTCCAAAGCAATTCCTT+TGG | 0.421772 | 3.4:-72899107 | None:intergenic |
GCCACGTTCAACCAAGCTGC+TGG | 0.422123 | 3.4:-72898125 | None:intergenic |
TATGGGGCAAACATTGGTAT+TGG | 0.425302 | 3.4:+72899140 | MS.gene29828:CDS |
AAAGCAATTCCTTTGGTCTC+AGG | 0.428168 | 3.4:-72899100 | None:intergenic |
GCTTTGCTAGCTTTGGCGAC+TGG | 0.429820 | 3.4:+72898779 | MS.gene29828:CDS |
CCCACAGATTGAAAGAGGTT+TGG | 0.431157 | 3.4:-72898373 | None:intergenic |
GGGCAATGCAACATTAGTAT+TGG | 0.438296 | 3.4:+72898829 | MS.gene29828:CDS |
CTCATTCTTGGATATGACAT+TGG | 0.445169 | 3.4:+72890723 | MS.gene29828:CDS |
TCATTCTTGGATATGACATT+GGG | 0.445844 | 3.4:+72890724 | MS.gene29828:CDS |
TGAGACCAAAGGAATTGCTT+TGG | 0.446229 | 3.4:+72899102 | MS.gene29828:CDS |
CTTAATGAGTTCTTCTAACT+CGG | 0.449686 | 3.4:-72898209 | None:intergenic |
CTAAACCCACAGATTGAAAG+AGG | 0.452624 | 3.4:-72898378 | None:intergenic |
GCCATTGGAAGGTGCATCAA+TGG | 0.461494 | 3.4:-72890640 | None:intergenic |
GCCATTGATGCACCTTCCAA+TGG | 0.471156 | 3.4:+72890639 | MS.gene29828:CDS |
CTTCCCGGATATTCTAAGAA+AGG | 0.471446 | 3.4:+72891292 | MS.gene29828:CDS |
GCTATTTCAGAAAGGTATAG+TGG | 0.472124 | 3.4:-72897917 | None:intergenic |
TTCCAATTCTTCATAGGAGT+TGG | 0.473326 | 3.4:+72897974 | MS.gene29828:CDS |
CCAAACCTCTTTCAATCTGT+GGG | 0.474306 | 3.4:+72898373 | MS.gene29828:CDS |
CCAATTGTCATCACGGCTGC+AGG | 0.478121 | 3.4:-72898079 | None:intergenic |
ACCAAACCTCTTTCAATCTG+TGG | 0.482629 | 3.4:+72898372 | MS.gene29828:CDS |
CGAAGAAATACCATCGTGTT+GGG | 0.482762 | 3.4:+72891443 | MS.gene29828:CDS |
TCGCCAGCCCCATGTGTGCT+TGG | 0.486469 | 3.4:-72898032 | None:intergenic |
TGGCGAGGTGCTTTCAGCAC+AGG | 0.490579 | 3.4:+72897950 | MS.gene29828:CDS |
CCTGCAGCCGTGATGACAAT+TGG | 0.499809 | 3.4:+72898079 | MS.gene29828:CDS |
TATCTTTCCATCAAAGCCAT+TGG | 0.503256 | 3.4:-72890655 | None:intergenic |
CTGCCAAGCACACATGGGGC+TGG | 0.506056 | 3.4:+72898029 | MS.gene29828:CDS |
CGACAAAAGCAGTTGAGACT+AGG | 0.517339 | 3.4:-72898459 | None:intergenic |
ACGTGACTGCCAAGCACACA+TGG | 0.517471 | 3.4:+72898023 | MS.gene29828:CDS |
CTGCCTTTCTTAGAATATCC+GGG | 0.528095 | 3.4:-72891295 | None:intergenic |
AGTTAGAAGAACTCATTAAG+TGG | 0.530071 | 3.4:+72898212 | MS.gene29828:CDS |
TGCTGGGTGTGTCGGATATG+AGG | 0.531185 | 3.4:-72898108 | None:intergenic |
AGGTTGAAAATGGCAGGTGG+AGG | 0.531701 | 3.4:+72890612 | None:intergenic |
AACCAAGCTGCTGGGTGTGT+CGG | 0.542991 | 3.4:-72898116 | None:intergenic |
GGGGCAAACATTGGTATTGG+CGG | 0.547729 | 3.4:+72899143 | MS.gene29828:CDS |
GCAAACATTGGTATTGGCGG+CGG | 0.548832 | 3.4:+72899146 | MS.gene29828:CDS |
AGCAGCACCAGCAAGAAAGA+TGG | 0.549935 | 3.4:-72891471 | None:intergenic |
AGCAAAGTCACTGCAGCTAT+CGG | 0.550701 | 3.4:+72891419 | MS.gene29828:CDS |
TGTATCGTTGCTGCATCTAG+TGG | 0.552864 | 3.4:+72890699 | MS.gene29828:CDS |
ACATTATATGGGGCAAACAT+TGG | 0.553331 | 3.4:+72899134 | MS.gene29828:CDS |
AGGACAAGGTTGAAAATGGC+AGG | 0.553852 | 3.4:+72890606 | None:intergenic |
TCGATATTGTCTCTCAAAGA+TGG | 0.553960 | 3.4:-72898275 | None:intergenic |
TCGAAGAAATACCATCGTGT+TGG | 0.559517 | 3.4:+72891442 | MS.gene29828:CDS |
ATATCGACCTCACTTAATCA+TGG | 0.560389 | 3.4:+72898291 | MS.gene29828:CDS |
ATCCGACACACCCAGCAGCT+TGG | 0.562187 | 3.4:+72898114 | MS.gene29828:CDS |
TTGGTGGAGCTATTTCAGAA+AGG | 0.562320 | 3.4:-72897925 | None:intergenic |
CCACGTTCAACCAAGCTGCT+GGG | 0.564694 | 3.4:-72898124 | None:intergenic |
GGTACAAAGGACATGTCAAA+GGG | 0.571326 | 3.4:+72898809 | MS.gene29828:CDS |
TTAATGAGTTCTTCTAACTC+GGG | 0.576345 | 3.4:-72898208 | None:intergenic |
GGTTGAAAATGGCAGGTGGA+GGG | 0.582573 | 3.4:+72890613 | None:intergenic |
TAACTCGGGCTCAACATCGA+TGG | 0.583460 | 3.4:-72898194 | None:intergenic |
GTGGCATGATAAACCAAGCC+AGG | 0.584674 | 3.4:+72898143 | MS.gene29828:CDS |
TGGTACAAAGGACATGTCAA+AGG | 0.584833 | 3.4:+72898808 | MS.gene29828:CDS |
TTTCCATCAAAGCCATTGGA+AGG | 0.597415 | 3.4:-72890651 | None:intergenic |
GAGTCAATGTACATTATATG+GGG | 0.599950 | 3.4:+72899124 | MS.gene29828:CDS |
CCCAGCAGCTTGGTTGAACG+TGG | 0.607250 | 3.4:+72898124 | MS.gene29828:CDS |
GTTGACGAGTCCAAGAATAA+CGG | 0.609102 | 3.4:-72898425 | None:intergenic |
AGATTCTTGTTCATTACGGG+TGG | 0.611668 | 3.4:+72898496 | MS.gene29828:CDS |
GAAGGCACCAATTGTCATCA+CGG | 0.622211 | 3.4:-72898086 | None:intergenic |
AAAAGCAGTTGAGACTAGGA+TGG | 0.625099 | 3.4:-72898455 | None:intergenic |
GATATTCTAAGAAAGGCAGC+TGG | 0.631809 | 3.4:+72891299 | MS.gene29828:CDS |
CGTGACTGCCAAGCACACAT+GGG | 0.636076 | 3.4:+72898024 | MS.gene29828:CDS |
TTCAGGAGGTGTTACAACAA+TGG | 0.637356 | 3.4:+72891250 | MS.gene29828:intron |
ATTCTTCATAGGAGTTGGCG+TGG | 0.640365 | 3.4:+72897979 | MS.gene29828:CDS |
GCTGGTGCTGCTATTAATGG+CGG | 0.645779 | 3.4:+72891482 | MS.gene29828:CDS |
AGAAATACCATCGTGTTGGG+TGG | 0.646781 | 3.4:+72891446 | MS.gene29828:CDS |
TCTGTGGGTTTAGGAAACAA+TGG | 0.653625 | 3.4:+72898388 | MS.gene29828:CDS |
TTGAGACTAGGATGGAAGCA+AGG | 0.659590 | 3.4:-72898447 | None:intergenic |
ACAAGGTTGAAAATGGCAGG+TGG | 0.665030 | 3.4:+72890609 | None:intergenic |
GCAAATGCCATGATTAAGTG+AGG | 0.668086 | 3.4:-72898298 | None:intergenic |
GGGTGTGTCGGATATGAGGA+AGG | 0.669650 | 3.4:-72898104 | None:intergenic |
GTGACTGCCAAGCACACATG+GGG | 0.687081 | 3.4:+72898025 | MS.gene29828:CDS |
ATAGCTCCACCAAAATGGCG+AGG | 0.691221 | 3.4:+72897935 | MS.gene29828:CDS |
GATGGCACCACCCAACACGA+TGG | 0.695361 | 3.4:-72891453 | None:intergenic |
GACTGGTGTTGATGGTACAA+AGG | 0.706853 | 3.4:+72898796 | MS.gene29828:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 72890621 | 72899207 | 72890621 | ID=MS.gene29828 |
chr3.4 | mRNA | 72890621 | 72899207 | 72890621 | ID=MS.gene29828.t1;Parent=MS.gene29828 |
chr3.4 | exon | 72890621 | 72890753 | 72890621 | ID=MS.gene29828.t1.exon1;Parent=MS.gene29828.t1 |
chr3.4 | CDS | 72890621 | 72890753 | 72890621 | ID=cds.MS.gene29828.t1;Parent=MS.gene29828.t1 |
chr3.4 | exon | 72891255 | 72891574 | 72891255 | ID=MS.gene29828.t1.exon2;Parent=MS.gene29828.t1 |
chr3.4 | CDS | 72891255 | 72891574 | 72891255 | ID=cds.MS.gene29828.t1;Parent=MS.gene29828.t1 |
chr3.4 | exon | 72897911 | 72898540 | 72897911 | ID=MS.gene29828.t1.exon3;Parent=MS.gene29828.t1 |
chr3.4 | CDS | 72897911 | 72898540 | 72897911 | ID=cds.MS.gene29828.t1;Parent=MS.gene29828.t1 |
chr3.4 | exon | 72898767 | 72898875 | 72898767 | ID=MS.gene29828.t1.exon4;Parent=MS.gene29828.t1 |
chr3.4 | CDS | 72898767 | 72898875 | 72898767 | ID=cds.MS.gene29828.t1;Parent=MS.gene29828.t1 |
chr3.4 | exon | 72899071 | 72899207 | 72899071 | ID=MS.gene29828.t1.exon5;Parent=MS.gene29828.t1 |
chr3.4 | CDS | 72899071 | 72899207 | 72899071 | ID=cds.MS.gene29828.t1;Parent=MS.gene29828.t1 |
Gene Sequence |
Protein sequence |