AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29831

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29831.t1 MTR_3g074270 91.365 498 23 1 1 498 1 478 0.0 911
MS.gene29831.t1 MTR_3g074390 66.471 510 164 3 1 503 1 510 0.0 712
MS.gene29831.t1 MTR_3g074410 67.530 502 160 2 1 499 1 502 0.0 712
MS.gene29831.t1 MTR_3g008160 50.607 494 237 5 16 505 16 506 2.28e-180 516
MS.gene29831.t1 MTR_3g074380 66.120 366 120 3 1 362 1 366 1.40e-176 501
MS.gene29831.t1 MTR_3g008170 49.307 505 248 6 5 504 4 505 1.59e-176 506
MS.gene29831.t1 MTR_5g006070 47.590 498 252 6 14 505 13 507 2.24e-176 506
MS.gene29831.t1 MTR_0204s0020 49.687 479 237 3 16 493 14 489 3.15e-173 497
MS.gene29831.t1 MTR_5g041550 50.196 510 248 4 1 505 1 509 1.13e-171 494
MS.gene29831.t1 MTR_7g091690 50.803 498 237 5 1 493 1 495 4.30e-171 492
MS.gene29831.t1 MTR_5g094760 49.509 509 245 5 1 502 1 504 8.36e-171 491
MS.gene29831.t1 MTR_4g116790 47.211 502 261 3 2 502 6 504 3.88e-170 490
MS.gene29831.t1 MTR_1g038630 48.780 492 249 2 16 505 16 506 6.90e-170 489
MS.gene29831.t1 MTR_0204s0020 49.061 479 237 4 16 493 14 486 4.93e-169 486
MS.gene29831.t1 MTR_0009s0370 49.087 493 245 4 18 505 16 507 7.17e-169 487
MS.gene29831.t1 MTR_5g082540 47.714 503 258 3 1 500 1 501 9.19e-169 486
MS.gene29831.t1 MTR_1g104750 45.908 501 263 6 1 496 1 498 1.84e-168 485
MS.gene29831.t1 MTR_0204s0040 46.386 498 263 3 3 499 9 503 5.19e-167 482
MS.gene29831.t1 MTR_3g093010 49.605 506 249 4 4 504 3 507 3.10e-165 478
MS.gene29831.t1 MTR_1g104770 45.418 502 265 6 1 496 1 499 4.02e-165 477
MS.gene29831.t1 MTR_1g104780 46.863 510 263 6 1 505 1 507 1.16e-164 476
MS.gene29831.t1 MTR_3g008160 50.000 460 223 5 50 505 1 457 2.59e-164 473
MS.gene29831.t1 MTR_4g116770 46.386 498 263 3 3 499 205 699 2.92e-164 482
MS.gene29831.t1 MTR_3g023480 47.454 491 252 4 18 503 16 505 4.65e-161 467
MS.gene29831.t1 MTR_3g074340 67.290 321 104 1 185 504 18 338 9.07e-161 459
MS.gene29831.t1 MTR_3g074320 66.978 321 105 1 185 504 18 338 4.36e-160 458
MS.gene29831.t1 MTR_8g102860 47.358 492 253 6 16 504 19 507 5.77e-159 462
MS.gene29831.t1 MTR_3g074370 66.667 321 106 1 185 504 18 338 8.76e-159 454
MS.gene29831.t1 MTR_5g006070 46.537 462 238 6 50 505 1 459 1.45e-158 459
MS.gene29831.t1 MTR_4g091370 50.305 491 238 5 14 499 14 503 2.20e-158 460
MS.gene29831.t1 MTR_6g087040 46.245 506 261 7 1 499 1 502 1.70e-156 455
MS.gene29831.t1 MTR_6g088375 46.245 506 261 7 1 499 1 502 1.70e-156 455
MS.gene29831.t1 MTR_1g038600 46.735 490 244 3 16 505 16 488 8.67e-156 453
MS.gene29831.t1 MTR_3g007910 47.686 497 226 6 4 497 3 468 2.24e-154 449
MS.gene29831.t1 MTR_4g090600 48.503 501 247 5 3 499 9 502 2.05e-148 435
MS.gene29831.t1 MTR_3g093060 48.107 449 226 4 50 492 1 448 2.13e-145 425
MS.gene29831.t1 MTR_3g074400 51.111 450 165 6 50 477 1 417 1.18e-144 422
MS.gene29831.t1 MTR_8g102860 46.725 458 238 6 50 504 1 455 1.47e-144 423
MS.gene29831.t1 MTR_4g116790 48.199 361 185 2 2 361 6 365 3.09e-120 358
MS.gene29831.t1 MTR_3g074330 67.089 158 45 1 1 151 1 158 1.13e-68 218
MS.gene29831.t1 MTR_3g074360 67.089 158 45 1 1 151 1 158 1.13e-68 218
MS.gene29831.t1 MTR_3g074310 66.456 158 46 1 1 151 1 158 6.62e-68 216
MS.gene29831.t1 MTR_6g088450 30.303 462 285 10 28 476 63 500 9.34e-57 197
MS.gene29831.t1 MTR_4g072030 31.905 420 256 10 94 490 79 491 2.05e-54 191
MS.gene29831.t1 MTR_8g103500 26.815 496 327 10 6 488 1 473 3.23e-53 187
MS.gene29831.t1 MTR_8g077890 29.448 489 291 10 28 489 24 485 9.62e-50 178
MS.gene29831.t1 MTR_4g069500 29.481 424 264 10 93 490 31 445 1.32e-49 177
MS.gene29831.t1 MTR_4g069500 29.481 424 264 10 93 490 81 495 3.63e-49 177
MS.gene29831.t1 MTR_2g013310 29.238 407 267 7 88 482 26 423 5.09e-49 175
MS.gene29831.t1 MTR_2g013310 29.238 407 267 7 88 482 99 496 8.86e-49 176
MS.gene29831.t1 MTR_4g077740 28.992 476 300 10 22 482 44 496 1.61e-48 175
MS.gene29831.t1 MTR_3g116240 28.455 492 292 14 27 488 32 493 6.40e-48 173
MS.gene29831.t1 MTR_5g096000 51.955 179 68 2 4 182 3 163 9.53e-48 167
MS.gene29831.t1 MTR_5g096000 44.697 132 72 1 367 497 168 299 1.24e-27 113
MS.gene29831.t1 MTR_7g082270 28.728 456 295 7 29 482 71 498 1.08e-46 170
MS.gene29831.t1 MTR_6g018790 28.665 457 294 7 29 482 111 538 2.57e-46 169
MS.gene29831.t1 MTR_7g094450 29.602 402 270 4 82 482 80 469 4.92e-46 167
MS.gene29831.t1 MTR_5g075300 26.772 508 311 12 14 489 7 485 1.31e-45 167
MS.gene29831.t1 MTR_7g005910 27.557 479 318 9 29 503 39 492 2.34e-45 166
MS.gene29831.t1 MTR_7g446340 26.446 484 315 10 12 482 43 498 3.03e-45 166
MS.gene29831.t1 MTR_6g007340 26.446 484 315 10 12 482 43 498 3.03e-45 166
MS.gene29831.t1 MTR_1g116660 26.596 470 316 9 29 492 41 487 8.04e-45 165
MS.gene29831.t1 MTR_3g084110 25.787 508 341 11 7 505 8 488 8.71e-44 162
MS.gene29831.t1 MTR_7g082270 29.250 400 254 6 29 427 71 442 1.66e-41 155
MS.gene29831.t1 MTR_8g077310 27.363 402 284 3 82 482 87 481 1.66e-41 155
MS.gene29831.t1 MTR_8g077310 27.366 391 276 3 93 482 1 384 2.98e-41 152
MS.gene29831.t1 MTR_1g116650 24.949 489 320 10 12 489 63 515 6.42e-41 154
MS.gene29831.t1 MTR_7g094110 28.358 402 275 4 82 482 82 471 1.37e-40 152
MS.gene29831.t1 MTR_8g077300 28.155 412 270 7 81 482 78 473 5.46e-40 151
MS.gene29831.t1 MTR_5g019870 26.667 495 301 14 27 489 18 482 1.14e-39 150
MS.gene29831.t1 MTR_2g020710 25.373 402 286 6 83 482 1 390 3.22e-37 141
MS.gene29831.t1 MTR_2g020710 25.248 404 288 6 81 482 88 479 6.99e-37 142
MS.gene29831.t1 MTR_2g049020 28.198 344 225 5 34 371 37 364 1.62e-36 142
MS.gene29831.t1 MTR_3g080240 26.464 461 302 10 28 482 98 527 2.54e-36 141
MS.gene29831.t1 MTR_5g020270 25.373 402 292 3 82 482 90 484 2.71e-36 140
MS.gene29831.t1 MTR_5g020270 25.320 391 284 3 93 482 1 384 5.64e-36 138
MS.gene29831.t1 MTR_7g113960 24.877 406 282 6 82 482 67 454 1.73e-35 138
MS.gene29831.t1 MTR_4g118610 25.485 412 277 7 81 482 91 482 2.05e-35 138
MS.gene29831.t1 MTR_7g113970 25.061 407 284 6 81 482 101 491 2.90e-35 138
MS.gene29831.t1 MTR_4g013205 24.837 459 310 8 28 482 41 468 4.35e-35 137
MS.gene29831.t1 MTR_5g077580 23.475 541 299 11 30 482 33 546 4.80e-35 138
MS.gene29831.t1 MTR_2g048720 30.031 323 203 5 34 351 37 341 5.13e-35 138
MS.gene29831.t1 MTR_1g022315 26.733 404 285 5 82 482 89 484 1.59e-34 135
MS.gene29831.t1 MTR_1g022315 26.718 393 277 5 93 482 1 385 1.88e-34 134
MS.gene29831.t1 MTR_0064s0040 44.966 149 69 2 4 151 5 141 5.10e-34 126
MS.gene29831.t1 MTR_7g094110 26.617 402 262 4 82 482 82 451 1.18e-33 133
MS.gene29831.t1 MTR_4g064820 28.272 382 241 7 5 370 78 442 3.78e-32 129
MS.gene29831.t1 MTR_6g087910 24.938 401 282 7 87 482 96 482 2.76e-31 126
MS.gene29831.t1 MTR_8g077310 27.972 286 198 3 81 365 86 364 2.10e-30 122
MS.gene29831.t1 MTR_2g026160 28.099 363 231 7 34 386 38 380 5.14e-30 124
MS.gene29831.t1 MTR_5g020270 24.631 406 269 7 82 482 90 463 5.74e-29 119
MS.gene29831.t1 MTR_1g038620 38.608 158 79 2 201 358 50 189 1.06e-28 112
MS.gene29831.t1 MTR_4g069500 27.796 313 193 9 202 490 3 306 3.65e-27 112
MS.gene29831.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.27e-26 112
MS.gene29831.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.30e-26 112
MS.gene29831.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.88e-26 110
MS.gene29831.t1 MTR_4g118610 25.073 343 227 7 81 413 91 413 3.35e-25 108
MS.gene29831.t1 MTR_7g113970 25.540 278 190 4 82 354 102 367 2.24e-24 105
MS.gene29831.t1 MTR_7g113960 25.455 275 188 4 82 351 67 329 3.33e-24 104
MS.gene29831.t1 MTR_1g114280 37.736 159 79 3 343 501 19 157 1.06e-23 97.8
MS.gene29831.t1 MTR_2g026140 26.031 388 246 8 3 380 4 360 5.78e-23 102
MS.gene29831.t1 MTR_5g024740 27.119 354 213 12 21 350 2 334 1.66e-20 95.5
MS.gene29831.t1 MTR_3g116060 33.929 168 105 3 94 257 56 221 1.89e-19 92.4
MS.gene29831.t1 MTR_8g073100 28.017 232 155 4 77 306 41 262 3.89e-19 91.3
MS.gene29831.t1 MTR_5g044910 29.885 174 116 3 83 252 47 218 9.45e-19 90.1
MS.gene29831.t1 MTR_3g118530 31.138 167 111 3 94 257 58 223 8.55e-16 80.9
MS.gene29831.t1 MTR_3g118530 31.138 167 111 3 94 257 58 223 2.72e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29831.t1 AT1G34580 60.558 502 193 3 1 497 1 502 0.0 628
MS.gene29831.t1 AT1G34580 59.649 456 180 2 50 501 1 456 0.0 564
MS.gene29831.t1 AT5G26340 49.203 502 248 5 1 497 1 500 0.0 518
MS.gene29831.t1 AT3G19930 50.301 499 244 3 4 499 3 500 1.65e-177 509
MS.gene29831.t1 AT3G19930 50.301 499 244 3 4 499 3 500 1.65e-177 509
MS.gene29831.t1 AT4G21480 52.567 487 228 3 14 498 14 499 6.72e-176 504
MS.gene29831.t1 AT1G11260 50.000 516 246 5 1 505 1 515 2.39e-175 504
MS.gene29831.t1 AT3G19940 50.518 483 236 3 19 499 21 502 6.59e-175 502
MS.gene29831.t1 AT1G50310 49.380 484 241 4 19 499 21 503 3.04e-172 496
MS.gene29831.t1 AT4G02050 47.896 499 250 5 1 493 1 495 1.16e-170 491
MS.gene29831.t1 AT4G02050 47.896 499 250 5 1 493 1 495 1.16e-170 491
MS.gene29831.t1 AT5G23270 48.400 500 252 4 1 495 1 499 1.21e-164 476
MS.gene29831.t1 AT5G61520 47.619 483 243 6 18 493 19 498 1.85e-164 476
MS.gene29831.t1 AT5G26250 46.774 496 255 5 16 505 15 507 1.24e-159 463
MS.gene29831.t1 AT3G05960 46.545 492 256 5 7 496 7 493 1.71e-157 457
MS.gene29831.t1 AT5G61520 46.681 452 231 6 49 493 2 450 8.02e-150 437
MS.gene29831.t1 AT1G77210 43.701 508 276 8 1 502 1 504 9.22e-150 438
MS.gene29831.t1 AT1G77210 43.701 508 276 8 1 502 1 504 9.22e-150 438
MS.gene29831.t1 AT1G07340 41.483 499 288 4 1 497 1 497 4.64e-139 410
MS.gene29831.t1 AT1G50310 47.009 351 183 3 151 499 11 360 1.16e-115 346
MS.gene29831.t1 AT1G77210 42.090 354 199 6 151 502 6 355 1.45e-98 301
MS.gene29831.t1 AT4G36670 27.921 505 303 12 27 505 21 490 2.40e-52 185
MS.gene29831.t1 AT3G18830 25.904 498 305 12 27 493 40 504 1.81e-50 181
MS.gene29831.t1 AT2G16130 27.273 484 310 10 27 489 30 492 5.00e-49 176
MS.gene29831.t1 AT2G18480 31.002 429 253 10 88 486 68 483 7.96e-49 176
MS.gene29831.t1 AT2G16120 26.860 484 312 10 27 489 30 492 3.12e-48 174
MS.gene29831.t1 AT5G16150 29.387 473 296 8 16 482 98 538 5.58e-47 171
MS.gene29831.t1 AT5G16150 29.387 473 296 8 16 482 98 538 5.58e-47 171
MS.gene29831.t1 AT5G16150 29.387 473 296 8 16 482 98 538 5.58e-47 171
MS.gene29831.t1 AT5G59250 29.555 494 305 9 6 482 85 552 3.75e-44 164
MS.gene29831.t1 AT1G75220 27.764 407 284 4 82 486 88 486 8.25e-44 162
MS.gene29831.t1 AT2G48020 27.833 406 280 5 81 485 67 460 1.13e-43 160
MS.gene29831.t1 AT2G48020 27.833 406 280 5 81 485 67 460 1.13e-43 160
MS.gene29831.t1 AT3G05160 26.860 484 318 7 1 482 1 450 1.52e-42 157
MS.gene29831.t1 AT2G20780 25.000 480 325 10 12 482 43 496 2.39e-42 158
MS.gene29831.t1 AT2G20780 26.420 405 281 8 87 482 42 438 5.73e-42 156
MS.gene29831.t1 AT3G05160 28.250 400 274 4 84 482 14 401 1.58e-41 154
MS.gene29831.t1 AT3G05160 28.250 400 274 4 84 482 14 401 1.58e-41 154
MS.gene29831.t1 AT5G17010 26.611 481 317 7 16 482 40 498 6.43e-41 154
MS.gene29831.t1 AT5G17010 26.611 481 317 7 16 482 40 498 6.43e-41 154
MS.gene29831.t1 AT5G17010 26.611 481 317 7 16 482 40 498 6.43e-41 154
MS.gene29831.t1 AT3G05165 26.226 469 312 6 16 482 23 459 7.23e-41 153
MS.gene29831.t1 AT3G05165 26.226 469 312 6 16 482 23 459 7.23e-41 153
MS.gene29831.t1 AT3G05165 26.226 469 312 6 16 482 23 459 7.23e-41 153
MS.gene29831.t1 AT1G19450 27.792 403 281 4 82 482 89 483 8.66e-41 153
MS.gene29831.t1 AT1G08930 25.847 472 314 8 14 482 49 487 1.82e-40 152
MS.gene29831.t1 AT1G08930 25.847 472 314 8 14 482 49 487 1.82e-40 152
MS.gene29831.t1 AT1G54730 27.340 406 274 5 82 482 72 461 1.89e-39 149
MS.gene29831.t1 AT5G27350 25.726 482 322 7 4 482 12 460 3.41e-39 149
MS.gene29831.t1 AT1G08900 28.960 404 270 7 82 482 23 412 4.07e-39 147
MS.gene29831.t1 AT4G04760 27.913 412 281 6 82 489 12 411 5.35e-39 147
MS.gene29831.t1 AT1G08900 28.960 404 270 7 82 482 65 454 7.20e-39 147
MS.gene29831.t1 AT1G08900 28.960 404 270 7 82 482 65 454 7.20e-39 147
MS.gene29831.t1 AT1G08900 28.960 404 270 7 82 482 57 446 7.42e-39 147
MS.gene29831.t1 AT4G04760 28.117 409 278 6 82 486 71 467 1.57e-38 147
MS.gene29831.t1 AT3G05150 28.362 409 267 9 82 482 75 465 2.26e-38 146
MS.gene29831.t1 AT3G05150 28.362 409 267 9 82 482 75 465 2.26e-38 146
MS.gene29831.t1 AT3G05150 28.362 409 267 9 82 482 75 465 2.34e-38 146
MS.gene29831.t1 AT3G05400 26.733 404 281 5 81 482 65 455 6.51e-38 145
MS.gene29831.t1 AT5G27360 24.426 479 328 7 6 482 18 464 9.73e-38 144
MS.gene29831.t1 AT5G18840 25.610 410 279 5 81 482 83 474 9.91e-38 145
MS.gene29831.t1 AT5G27360 24.426 479 328 7 6 482 66 512 1.10e-37 145
MS.gene29831.t1 AT3G03090 29.612 412 265 6 85 482 98 498 3.63e-37 143
MS.gene29831.t1 AT4G04750 26.733 404 281 5 82 482 76 467 4.92e-37 143
MS.gene29831.t1 AT4G04750 26.733 404 281 5 82 482 76 467 4.92e-37 143
MS.gene29831.t1 AT3G05165 26.168 428 282 6 16 441 23 418 5.37e-37 142
MS.gene29831.t1 AT3G05165 26.168 428 282 6 16 441 23 418 5.37e-37 142
MS.gene29831.t1 AT4G04750 26.667 405 282 5 81 482 119 511 7.27e-37 143
MS.gene29831.t1 AT3G05165 26.714 423 275 7 5 425 13 402 9.21e-37 142
MS.gene29831.t1 AT1G79820 26.087 460 303 8 28 482 59 486 1.32e-36 142
MS.gene29831.t1 AT1G79820 26.087 460 303 8 28 482 59 486 1.32e-36 142
MS.gene29831.t1 AT1G67300 25.974 462 304 8 28 482 56 486 1.45e-36 142
MS.gene29831.t1 AT3G05155 25.432 405 283 7 81 482 66 454 4.50e-36 139
MS.gene29831.t1 AT1G67300 26.683 416 261 8 28 434 56 436 5.57e-36 139
MS.gene29831.t1 AT1G67300 26.683 416 261 8 28 434 56 436 5.57e-36 139
MS.gene29831.t1 AT2G43330 24.638 483 341 8 27 505 35 498 6.30e-36 140
MS.gene29831.t1 AT1G67300 26.282 468 294 10 28 482 56 485 2.23e-35 138
MS.gene29831.t1 AT1G67300 26.282 468 294 10 28 482 56 485 2.23e-35 138
MS.gene29831.t1 AT1G08900 28.871 381 248 8 82 452 65 432 2.43e-35 137
MS.gene29831.t1 AT4G04760 27.873 409 276 6 82 486 71 464 4.55e-35 137
MS.gene29831.t1 AT1G54730 27.397 365 244 5 82 441 72 420 9.55e-35 135
MS.gene29831.t1 AT3G05400 27.688 372 254 5 113 482 77 435 1.16e-34 135
MS.gene29831.t1 AT1G05030 25.217 460 307 10 29 482 85 513 3.29e-34 135
MS.gene29831.t1 AT1G54730 25.485 412 253 5 82 482 72 440 3.86e-34 134
MS.gene29831.t1 AT1G05030 26.119 402 278 7 87 482 73 461 6.15e-34 134
MS.gene29831.t1 AT1G08890 23.868 486 336 9 1 482 1 456 1.13e-33 133
MS.gene29831.t1 AT1G67300 26.161 409 258 8 28 427 56 429 2.15e-33 131
MS.gene29831.t1 AT1G67300 26.161 409 258 8 28 427 56 429 2.15e-33 131
MS.gene29831.t1 AT4G16480 28.421 380 244 6 3 370 4 367 2.73e-33 133
MS.gene29831.t1 AT4G16480 28.421 380 244 6 3 370 4 367 2.73e-33 133
MS.gene29831.t1 AT4G16480 28.421 380 244 6 3 370 4 367 2.73e-33 133
MS.gene29831.t1 AT1G30220 28.916 332 214 6 34 359 39 354 3.04e-33 133
MS.gene29831.t1 AT1G79820 25.245 408 273 6 28 433 59 436 1.08e-32 130
MS.gene29831.t1 AT5G27360 26.404 356 247 5 129 482 18 360 2.38e-32 127
MS.gene29831.t1 AT5G27360 26.404 356 247 5 129 482 18 360 2.38e-32 127
MS.gene29831.t1 AT1G08920 24.510 408 290 6 82 482 72 468 1.20e-29 122
MS.gene29831.t1 AT1G54730 25.337 371 223 5 82 441 72 399 1.34e-29 120
MS.gene29831.t1 AT2G48020 27.719 285 197 3 82 365 68 344 2.52e-29 119
MS.gene29831.t1 AT1G54730 27.300 337 224 5 82 413 72 392 3.51e-29 119
MS.gene29831.t1 AT1G54730 27.300 337 224 5 82 413 72 392 3.51e-29 119
MS.gene29831.t1 AT2G35740 27.378 347 227 5 34 371 37 367 6.75e-29 120
MS.gene29831.t1 AT1G08920 24.816 407 283 7 82 482 72 461 7.23e-29 119
MS.gene29831.t1 AT2G48020 27.798 277 191 3 81 356 67 335 8.40e-29 117
MS.gene29831.t1 AT1G54730 28.000 275 181 4 82 351 72 334 4.55e-27 112
MS.gene29831.t1 AT5G27360 23.706 367 248 6 6 369 18 355 3.92e-26 111
MS.gene29831.t1 AT1G54730 27.309 249 167 3 82 325 72 311 1.77e-25 107
MS.gene29831.t1 AT1G54730 27.309 249 167 3 82 325 72 311 1.77e-25 107
MS.gene29831.t1 AT1G54730 27.309 249 167 3 82 325 72 311 3.67e-25 107
MS.gene29831.t1 AT1G08920 24.571 350 241 7 82 425 72 404 3.91e-25 108
MS.gene29831.t1 AT3G05155 23.867 331 219 7 23 351 27 326 1.47e-24 104
MS.gene29831.t1 AT3G20460 23.325 403 296 5 81 482 92 482 4.74e-24 105
MS.gene29831.t1 AT5G17010 24.689 482 265 13 16 482 37 435 2.63e-23 102
MS.gene29831.t1 AT1G79820 22.707 458 273 6 28 482 59 438 2.66e-23 102
MS.gene29831.t1 AT3G51490 29.644 253 157 7 22 271 3 237 1.52e-21 99.0
MS.gene29831.t1 AT3G51490 29.644 253 157 7 22 271 3 237 1.66e-21 98.6
MS.gene29831.t1 AT3G51490 31.016 187 126 3 87 271 2 187 2.70e-20 94.7
MS.gene29831.t1 AT1G20840 30.645 186 127 2 94 277 56 241 1.00e-18 90.1
MS.gene29831.t1 AT1G20840 30.645 186 127 2 94 277 56 241 1.00e-18 90.1
MS.gene29831.t1 AT1G79820 23.546 361 212 5 125 482 77 376 1.35e-18 88.2
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.36e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.36e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.36e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.36e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.36e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.36e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.36e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.59e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.59e-18 89.0
MS.gene29831.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.59e-18 89.0

Find 98 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATATGACCTTGGAATTTC+AGG 0.170370 3.4:+72865361 MS.gene29831:CDS
CTTGTGGGTGGTGCCATTAC+TGG 0.172040 3.4:+72865794 MS.gene29831:CDS
AATATTGCTATGCTCATTAT+TGG 0.232942 3.4:+72865827 MS.gene29831:CDS
CTTAATGCTCCTCGCCATTT+TGG 0.247223 3.4:-72866241 None:intergenic
AAATGAAGTCCTTTGGTTTC+AGG 0.252457 3.4:-72867318 None:intergenic
CTTTCTTGTTCCATGGTACT+TGG 0.252907 3.4:+72867259 MS.gene29831:CDS
TGGTGTGTCGTATATAATTA+AGG 0.283943 3.4:-72866401 None:intergenic
CGGAAATCGCTCCACCAAAA+TGG 0.309836 3.4:+72866227 MS.gene29831:CDS
GCAGCCTTCTCAAGGACTTC+AGG 0.312481 3.4:-72865611 None:intergenic
TATTGGCGCTACTACGTTAA+AGG 0.334241 3.4:+72867375 MS.gene29831:CDS
TTACTTCTCGGCTTTGGAAT+TGG 0.340499 3.4:+72865854 MS.gene29831:CDS
AGTGTCTACTCTGCAGGTTT+TGG 0.343218 3.4:+72867078 MS.gene29831:CDS
CAAACCCAATCGATACAAAA+AGG 0.344412 3.4:-72866672 None:intergenic
TGAAACCAAAGGACTTCATT+TGG 0.348457 3.4:+72867320 MS.gene29831:CDS
CGTAGAAACACCATCATGTT+GGG 0.353809 3.4:+72865758 MS.gene29831:CDS
GGTCGATTACTTCTCGGCTT+TGG 0.353860 3.4:+72865848 MS.gene29831:CDS
GGCTACTCCATTGTACCTTT+CGG 0.362825 3.4:+72866207 MS.gene29831:intron
CTTCTCAACCATTGTTGATC+GGG 0.374414 3.4:+72866759 MS.gene29831:CDS
CCTTTGAAAATCAGAACAAC+TGG 0.375616 3.4:+72867147 MS.gene29831:CDS
ATTCACGTCCTCACTGTATC+TGG 0.378077 3.4:+72865685 MS.gene29831:CDS
ATTATTGGTCGATTACTTCT+CGG 0.379515 3.4:+72865842 MS.gene29831:CDS
ACAACTCACGGGGATCAATA+TGG 0.380415 3.4:+72866630 MS.gene29831:CDS
CCACGCTCCACCAAACTGTT+TGG 0.383713 3.4:-72866421 None:intergenic
TTGCTCTCAACATCCACTTC+TGG 0.383843 3.4:-72865280 None:intergenic
TGTTGCCGCAAAACACCCTT+GGG 0.384293 3.4:+72866321 MS.gene29831:CDS
TGGGGATGGCGAATCTCTCT+TGG 0.392847 3.4:+72866340 MS.gene29831:CDS
TGAATCCAAATGAAGTCCTT+TGG 0.395713 3.4:-72867325 None:intergenic
TGGATTCAATCTATGACATA+TGG 0.404244 3.4:+72867340 MS.gene29831:CDS
TCGATATTGTCTCTCCAATA+TGG 0.407944 3.4:-72866569 None:intergenic
TGTGTTGTCTCAGACATTCA+TGG 0.408561 3.4:+72867209 MS.gene29831:CDS
TTGCTTGGCAACATTATACT+TGG 0.420380 3.4:+72866709 MS.gene29831:CDS
ACGTCCTCACTGTATCTGGC+TGG 0.427126 3.4:+72865689 MS.gene29831:CDS
TATGGTGCTTTCTTGTTCCA+TGG 0.437263 3.4:+72867252 MS.gene29831:CDS
ATGTTATGTCACTTGAAGTA+TGG 0.438209 3.4:+72867234 MS.gene29831:CDS
ATACGACACACCAAACAGTT+TGG 0.446900 3.4:+72866411 MS.gene29831:CDS
CTTGGAATTATCCACAATAG+AGG 0.466419 3.4:-72867114 None:intergenic
GCGACTGGTGTTCACGGAAC+AGG 0.469212 3.4:+72867012 MS.gene29831:CDS
CGAAGAGTCTTGTTCATCAT+AGG 0.469654 3.4:+72866787 MS.gene29831:CDS
TCTTCTCAACCATTGTTGAT+CGG 0.472011 3.4:+72866758 MS.gene29831:CDS
TCAACCATTGTTGATCGGGT+TGG 0.475506 3.4:+72866763 MS.gene29831:CDS
TTGTTGCCGCAAAACACCCT+TGG 0.476530 3.4:+72866320 MS.gene29831:CDS
TTGATGAGTGTCTACTCTGC+AGG 0.483118 3.4:+72867072 MS.gene29831:CDS
TCTAACAAGTTCTTCTAACT+CGG 0.490740 3.4:-72866503 None:intergenic
TATGGTGTAAACACTGGTAT+TGG 0.490926 3.4:+72867358 MS.gene29831:CDS
GGTCATGGGGTCCTCTATTG+TGG 0.495738 3.4:+72867103 MS.gene29831:CDS
TGCATTGTTGCAGCATCTAG+TGG 0.496424 3.4:+72865328 MS.gene29831:CDS
CCGATAGTGATCAATGCTGC+TGG 0.500955 3.4:-72866376 None:intergenic
GGTCACCAAGCAGCTTTGCT+TGG 0.501441 3.4:+72866694 MS.gene29831:CDS
GCAAGAAGAGTATAATAAAG+AGG 0.511393 3.4:-72867296 None:intergenic
GCAATGGCGACTGGTGTTCA+CGG 0.513386 3.4:+72867006 MS.gene29831:CDS
CAAAGCAGACACACCAGAAG+TGG 0.514148 3.4:+72865267 MS.gene29831:CDS
GGTATCATCTTTCTTGTGGG+TGG 0.517222 3.4:+72865782 MS.gene29831:CDS
CTTTCCTGAAGTCCTTGAGA+AGG 0.524113 3.4:+72865607 MS.gene29831:CDS
CATAGAAGGTTCAACATGGC+TGG 0.524744 3.4:+72865235 None:intergenic
CTAACAAGTTCTTCTAACTC+GGG 0.526141 3.4:-72866502 None:intergenic
ATTGTGATGGCAATGGCGAC+TGG 0.537992 3.4:+72866997 MS.gene29831:CDS
CGTCCTCACTGTATCTGGCT+GGG 0.541796 3.4:+72865690 MS.gene29831:CDS
CCGCAAAACACCCTTGGGGA+TGG 0.542471 3.4:+72866326 MS.gene29831:CDS
CGACACACCAAACAGTTTGG+TGG 0.546423 3.4:+72866414 MS.gene29831:CDS
CCAGCAGCATTGATCACTAT+CGG 0.547786 3.4:+72866376 MS.gene29831:CDS
GAGACAATATCGACCTCACT+TGG 0.559094 3.4:+72866579 MS.gene29831:CDS
CCAAACAGTTTGGTGGAGCG+TGG 0.560048 3.4:+72866421 MS.gene29831:CDS
CCTTGAGAAGGCTGCAAAAG+CGG 0.563843 3.4:+72865619 MS.gene29831:CDS
AGGTTCAACATGGCTGGTGG+AGG 0.564731 3.4:+72865241 None:intergenic
CAAGAAGAGTATAATAAAGA+GGG 0.565630 3.4:-72867295 None:intergenic
GATCAATGCTGCTGGAACCA+CGG 0.567606 3.4:-72866368 None:intergenic
CGGAACAGGTAGCATATCGA+AGG 0.581483 3.4:+72867026 MS.gene29831:CDS
ACGTAGAAACACCATCATGT+TGG 0.585374 3.4:+72865757 MS.gene29831:CDS
AGAGAGATTCGCCATCCCCA+AGG 0.594124 3.4:-72866337 None:intergenic
AGAAGGTTCAACATGGCTGG+TGG 0.594456 3.4:+72865238 None:intergenic
TAGTCGAATCACATCCACAC+TGG 0.602221 3.4:+72865733 MS.gene29831:CDS
AAAGCTTTGCATAAAATCAG+AGG 0.605462 3.4:+72866463 MS.gene29831:CDS
GCGATTTCCGAAAGGTACAA+TGG 0.605466 3.4:-72866214 None:intergenic
AGTCGAATCACATCCACACT+GGG 0.608510 3.4:+72865734 MS.gene29831:CDS
GGCGAGGAGCATTAAGCACA+TGG 0.611189 3.4:+72866248 MS.gene29831:CDS
AATCTCTCTTGGCTTAGCCG+TGG 0.614280 3.4:+72866351 MS.gene29831:CDS
CTCTTCTTGCCTGAAACCAA+AGG 0.616625 3.4:+72867309 MS.gene29831:CDS
GAGAGATTCGCCATCCCCAA+GGG 0.619261 3.4:-72866336 None:intergenic
TGTTGCCAAGCAAAGCTGCT+TGG 0.620105 3.4:-72866699 None:intergenic
ATGACATATGGTGTAAACAC+TGG 0.624663 3.4:+72867352 MS.gene29831:CDS
AGAGTCTTGTTCATCATAGG+TGG 0.627266 3.4:+72866790 MS.gene29831:CDS
CAAACAGTTTGGTGGAGCGT+GGG 0.635003 3.4:+72866422 MS.gene29831:CDS
GTAGAAACACCATCATGTTG+GGG 0.637596 3.4:+72865759 MS.gene29831:CDS
TCGACCAACCCGATCAACAA+TGG 0.638791 3.4:-72866767 None:intergenic
TTGGTGGAGCGATTTCCGAA+AGG 0.640849 3.4:-72866222 None:intergenic
ATCGCTCCACCAAAATGGCG+AGG 0.640935 3.4:+72866232 MS.gene29831:CDS
TGACAACAATCCAAGTACCA+TGG 0.646403 3.4:-72867269 None:intergenic
GCAACTGCTATCACCAAGTG+AGG 0.648762 3.4:-72866592 None:intergenic
GTGGGTGGTGCCATTACTGG+AGG 0.653067 3.4:+72865797 MS.gene29831:CDS
TATTGCTATGAAGATTGCGG+TGG 0.662302 3.4:+72866972 MS.gene29831:intron
GGTGGCTATTGTGATGGCAA+TGG 0.669652 3.4:+72866990 MS.gene29831:CDS
GATTGCGGTGGCTATTGTGA+TGG 0.674554 3.4:+72866984 MS.gene29831:intron
GGAACAGGTAGCATATCGAA+GGG 0.679938 3.4:+72867027 MS.gene29831:CDS
TAGAAACACCATCATGTTGG+GGG 0.693319 3.4:+72865760 MS.gene29831:CDS
GGTGTTTCTACGTCCCAGTG+TGG 0.701991 3.4:-72865747 None:intergenic
AGAAACACCATCATGTTGGG+GGG 0.714656 3.4:+72865761 MS.gene29831:CDS
GTTGCCGCAAAACACCCTTG+GGG 0.729000 3.4:+72866322 MS.gene29831:CDS
TAACCCAGCCAGATACAGTG+AGG 0.761395 3.4:-72865693 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAATCATAAAATATTACA+CGG - chr3.4:72865903-72865922 None:intergenic 15.0%
!! AGAATTAAAGATAGAAATCT+AGG - chr3.4:72866853-72866872 None:intergenic 20.0%
!!! TACATTTTGAAGATTCAAAA+TGG - chr3.4:72865928-72865947 None:intergenic 20.0%
!!! TTTCAATTTTTTATGCAAGT+TGG + chr3.4:72866271-72866290 MS.gene29831:CDS 20.0%
! AATATTGCTATGCTCATTAT+TGG + chr3.4:72865827-72865846 MS.gene29831:CDS 25.0%
! ATACAACCATTATTGAAGTA+TGG + chr3.4:72866172-72866191 MS.gene29831:intron 25.0%
! ATCAATTCAATTGATGAAAC+TGG + chr3.4:72866034-72866053 MS.gene29831:intron 25.0%
! ATTTCCATCAAGAATTGAAT+TGG - chr3.4:72865537-72865556 None:intergenic 25.0%
! ATTTCTATCTTTAATTCTCC+CGG + chr3.4:72866855-72866874 MS.gene29831:intron 25.0%
! GATGGAAATGTTAAAATTTC+AGG + chr3.4:72865548-72865567 MS.gene29831:intron 25.0%
! TACGAATCAACAAATTAGTT+TGG + chr3.4:72865975-72865994 MS.gene29831:intron 25.0%
! TGACAAACATCTAAATTGAT+TGG - chr3.4:72866014-72866033 None:intergenic 25.0%
! TTCAAAGGAAAAATTTCACT+TGG - chr3.4:72867135-72867154 None:intergenic 25.0%
! TTCTAAACTAAATTTAGTGC+CGG - chr3.4:72866877-72866896 None:intergenic 25.0%
!! ATTTTCGTTGAGATAATTGT+AGG + chr3.4:72865490-72865509 MS.gene29831:intron 25.0%
!! CAAGAAGAGTATAATAAAGA+GGG - chr3.4:72867298-72867317 None:intergenic 25.0%
!! GAGATAATTGTAGGTTTTTA+AGG + chr3.4:72865499-72865518 MS.gene29831:intron 25.0%
!!! AATGTAGAATTTTGACAAGT+AGG + chr3.4:72865942-72865961 MS.gene29831:intron 25.0%
AAAAAGAACCTGAAATTCCA+AGG - chr3.4:72865372-72865391 None:intergenic 30.0%
AAAGCTTTGCATAAAATCAG+AGG + chr3.4:72866463-72866482 MS.gene29831:CDS 30.0%
ATCTATTGCTATGAAGATTG+CGG + chr3.4:72866969-72866988 MS.gene29831:intron 30.0%
ATTATTGGTCGATTACTTCT+CGG + chr3.4:72865842-72865861 MS.gene29831:CDS 30.0%
ATTCAATTGATGAAACTGGA+TGG + chr3.4:72866038-72866057 MS.gene29831:intron 30.0%
CTAACCAATTCAATTCTTGA+TGG + chr3.4:72865530-72865549 MS.gene29831:intron 30.0%
GGAAATGTTAAAATTTCAGG+AGG + chr3.4:72865551-72865570 MS.gene29831:intron 30.0%
TCTAAACTAAATTTAGTGCC+GGG - chr3.4:72866876-72866895 None:intergenic 30.0%
TCTAACAAGTTCTTCTAACT+CGG - chr3.4:72866506-72866525 None:intergenic 30.0%
TGGATTCAATCTATGACATA+TGG + chr3.4:72867340-72867359 MS.gene29831:CDS 30.0%
TGGTGTGTCGTATATAATTA+AGG - chr3.4:72866404-72866423 None:intergenic 30.0%
! ATGTTATGTCACTTGAAGTA+TGG + chr3.4:72867234-72867253 MS.gene29831:CDS 30.0%
! GATTTTATGCAAAGCTTTTC+TGG - chr3.4:72866461-72866480 None:intergenic 30.0%
! GCAAGAAGAGTATAATAAAG+AGG - chr3.4:72867299-72867318 None:intergenic 30.0%
! TCTATACTTGATGCTTTAGA+AGG - chr3.4:72865433-72865452 None:intergenic 30.0%
!! CTATACTTGATGCTTTAGAA+GGG - chr3.4:72865432-72865451 None:intergenic 30.0%
!! TATACTTGATGCTTTAGAAG+GGG - chr3.4:72865431-72865450 None:intergenic 30.0%
!!! CTAACCTTTTTGTATCGATT+GGG + chr3.4:72866668-72866687 MS.gene29831:CDS 30.0%
ATGACATATGGTGTAAACAC+TGG + chr3.4:72867352-72867371 MS.gene29831:CDS 35.0%
CAAACCCAATCGATACAAAA+AGG - chr3.4:72866675-72866694 None:intergenic 35.0%
CAATCGCCATACTTCAATAA+TGG - chr3.4:72866181-72866200 None:intergenic 35.0%
CCAATCGATACAAAAAGGTT+AGG - chr3.4:72866670-72866689 None:intergenic 35.0%
CTAACAAGTTCTTCTAACTC+GGG - chr3.4:72866505-72866524 None:intergenic 35.0%
CTCTCCAATATGGTCAAAAA+AGG - chr3.4:72866562-72866581 None:intergenic 35.0%
CTTGGAATTATCCACAATAG+AGG - chr3.4:72867117-72867136 None:intergenic 35.0%
TATGGTGTAAACACTGGTAT+TGG + chr3.4:72867358-72867377 MS.gene29831:CDS 35.0%
TCGATATTGTCTCTCCAATA+TGG - chr3.4:72866572-72866591 None:intergenic 35.0%
TCTTCTCAACCATTGTTGAT+CGG + chr3.4:72866758-72866777 MS.gene29831:CDS 35.0%
TGAAACCAAAGGACTTCATT+TGG + chr3.4:72867320-72867339 MS.gene29831:CDS 35.0%
TGAATCCAAATGAAGTCCTT+TGG - chr3.4:72867328-72867347 None:intergenic 35.0%
TTGCTTGGCAACATTATACT+TGG + chr3.4:72866709-72866728 MS.gene29831:CDS 35.0%
! AAATGAAGTCCTTTGGTTTC+AGG - chr3.4:72867321-72867340 None:intergenic 35.0%
! CCAGTTGTTCTGATTTTCAA+AGG - chr3.4:72867150-72867169 None:intergenic 35.0%
! CCTTTGAAAATCAGAACAAC+TGG + chr3.4:72867147-72867166 MS.gene29831:CDS 35.0%
! CTTCAGGAAAGAATTTTTCG+AGG - chr3.4:72865598-72865617 None:intergenic 35.0%
! GAAGTATGGCGATTGATTTA+AGG + chr3.4:72866186-72866205 MS.gene29831:intron 35.0%
!! CCTAACCTTTTTGTATCGAT+TGG + chr3.4:72866667-72866686 MS.gene29831:CDS 35.0%
!! CTCATTTTTGGATATGACCT+TGG + chr3.4:72865352-72865371 MS.gene29831:CDS 35.0%
!! TTTTATGCAAGTTGGCGTTT+TGG + chr3.4:72866279-72866298 MS.gene29831:CDS 35.0%
!!! AGAGCCTTTTTTGACCATAT+TGG + chr3.4:72866555-72866574 MS.gene29831:CDS 35.0%
!!! CTTTTTGTATCGATTGGGTT+TGG + chr3.4:72866673-72866692 MS.gene29831:CDS 35.0%
!!! GGAAAGAATTTTTCGAGGAA+TGG - chr3.4:72865593-72865612 None:intergenic 35.0%
ACGTAGAAACACCATCATGT+TGG + chr3.4:72865757-72865776 MS.gene29831:CDS 40.0%
ATACGACACACCAAACAGTT+TGG + chr3.4:72866411-72866430 MS.gene29831:CDS 40.0%
CGTAGAAACACCATCATGTT+GGG + chr3.4:72865758-72865777 MS.gene29831:CDS 40.0%
CTTCTCAACCATTGTTGATC+GGG + chr3.4:72866759-72866778 MS.gene29831:CDS 40.0%
CTTTCTTGTTCCATGGTACT+TGG + chr3.4:72867259-72867278 MS.gene29831:CDS 40.0%
GGATATGACCTTGGAATTTC+AGG + chr3.4:72865361-72865380 MS.gene29831:CDS 40.0%
GTAGAAACACCATCATGTTG+GGG + chr3.4:72865759-72865778 MS.gene29831:CDS 40.0%
TAGAAACACCATCATGTTGG+GGG + chr3.4:72865760-72865779 MS.gene29831:CDS 40.0%
TATGGTGCTTTCTTGTTCCA+TGG + chr3.4:72867252-72867271 MS.gene29831:CDS 40.0%
TATTGCTATGAAGATTGCGG+TGG + chr3.4:72866972-72866991 MS.gene29831:intron 40.0%
TATTGGCGCTACTACGTTAA+AGG + chr3.4:72867375-72867394 MS.gene29831:CDS 40.0%
TGACAACAATCCAAGTACCA+TGG - chr3.4:72867272-72867291 None:intergenic 40.0%
TGTGTTGTCTCAGACATTCA+TGG + chr3.4:72867209-72867228 MS.gene29831:CDS 40.0%
! ATTTTGAGCACCTCCAGTAA+TGG - chr3.4:72865810-72865829 None:intergenic 40.0%
!! AGAGTCTTGTTCATCATAGG+TGG + chr3.4:72866790-72866809 MS.gene29831:CDS 40.0%
!! CGAAGAGTCTTGTTCATCAT+AGG + chr3.4:72866787-72866806 MS.gene29831:CDS 40.0%
!! TTACTTCTCGGCTTTGGAAT+TGG + chr3.4:72865854-72865873 MS.gene29831:CDS 40.0%
!!! GCATCTAGTGGACTCATTTT+TGG + chr3.4:72865340-72865359 MS.gene29831:CDS 40.0%
!!! TCCGCTTTTTCAACAACTCA+CGG + chr3.4:72866618-72866637 MS.gene29831:CDS 40.0%
ACAACTCACGGGGATCAATA+TGG + chr3.4:72866630-72866649 MS.gene29831:CDS 45.0%
AGAAACACCATCATGTTGGG+GGG + chr3.4:72865761-72865780 MS.gene29831:CDS 45.0%
AGTCGAATCACATCCACACT+GGG + chr3.4:72865734-72865753 MS.gene29831:CDS 45.0%
ATTCACGTCCTCACTGTATC+TGG + chr3.4:72865685-72865704 MS.gene29831:CDS 45.0%
CCCGTGAGTTGTTGAAAAAG+CGG - chr3.4:72866622-72866641 None:intergenic 45.0%
CTCTTCTTGCCTGAAACCAA+AGG + chr3.4:72867309-72867328 MS.gene29831:CDS 45.0%
CTTTCCTGAAGTCCTTGAGA+AGG + chr3.4:72865607-72865626 MS.gene29831:CDS 45.0%
GAGACAATATCGACCTCACT+TGG + chr3.4:72866579-72866598 MS.gene29831:CDS 45.0%
GGAACAGGTAGCATATCGAA+GGG + chr3.4:72867027-72867046 MS.gene29831:CDS 45.0%
GGCTACTCCATTGTACCTTT+CGG + chr3.4:72866207-72866226 MS.gene29831:intron 45.0%
GGTATCATCTTTCTTGTGGG+TGG + chr3.4:72865782-72865801 MS.gene29831:CDS 45.0%
TAGTCGAATCACATCCACAC+TGG + chr3.4:72865733-72865752 MS.gene29831:CDS 45.0%
TCAACCATTGTTGATCGGGT+TGG + chr3.4:72866763-72866782 MS.gene29831:CDS 45.0%
TGCATTGTTGCAGCATCTAG+TGG + chr3.4:72865328-72865347 MS.gene29831:CDS 45.0%
TTGATGAGTGTCTACTCTGC+AGG + chr3.4:72867072-72867091 MS.gene29831:CDS 45.0%
TTGCTCTCAACATCCACTTC+TGG - chr3.4:72865283-72865302 None:intergenic 45.0%
! AGTGTCTACTCTGCAGGTTT+TGG + chr3.4:72867078-72867097 MS.gene29831:CDS 45.0%
! CTTAATGCTCCTCGCCATTT+TGG - chr3.4:72866244-72866263 None:intergenic 45.0%
! GCGATTTCCGAAAGGTACAA+TGG - chr3.4:72866217-72866236 None:intergenic 45.0%
!! CCAGCAGCATTGATCACTAT+CGG + chr3.4:72866376-72866395 MS.gene29831:CDS 45.0%
!! GGGGGTATCATCTTTCTTGT+GGG + chr3.4:72865779-72865798 MS.gene29831:CDS 45.0%
!! TCTACTCTGCAGGTTTTGGT+TGG + chr3.4:72867082-72867101 MS.gene29831:CDS 45.0%
!!! CCGCTTTTTCAACAACTCAC+GGG + chr3.4:72866619-72866638 MS.gene29831:CDS 45.0%
!!! CGCTTTTTCAACAACTCACG+GGG + chr3.4:72866620-72866639 MS.gene29831:CDS 45.0%
!!! TGCAGGTTTTGGTTGGTCAT+GGG + chr3.4:72867089-72867108 MS.gene29831:CDS 45.0%
AATCTCTCTTGGCTTAGCCG+TGG + chr3.4:72866351-72866370 MS.gene29831:CDS 50.0%
ATTGTGATGGCAATGGCGAC+TGG + chr3.4:72866997-72867016 MS.gene29831:CDS 50.0%
CAAAGCAGACACACCAGAAG+TGG + chr3.4:72865267-72865286 MS.gene29831:CDS 50.0%
CCGATAGTGATCAATGCTGC+TGG - chr3.4:72866379-72866398 None:intergenic 50.0%
CCTTGAGAAGGCTGCAAAAG+CGG + chr3.4:72865619-72865638 MS.gene29831:CDS 50.0%
CGACACACCAAACAGTTTGG+TGG + chr3.4:72866414-72866433 MS.gene29831:CDS 50.0%
CGGAAATCGCTCCACCAAAA+TGG + chr3.4:72866227-72866246 MS.gene29831:CDS 50.0%
CGGAACAGGTAGCATATCGA+AGG + chr3.4:72867026-72867045 MS.gene29831:CDS 50.0%
GATCAATGCTGCTGGAACCA+CGG - chr3.4:72866371-72866390 None:intergenic 50.0%
GATGATACCCCCCAACATGA+TGG - chr3.4:72865771-72865790 None:intergenic 50.0%
GATTGCGGTGGCTATTGTGA+TGG + chr3.4:72866984-72867003 MS.gene29831:intron 50.0%
GCAACTGCTATCACCAAGTG+AGG - chr3.4:72866595-72866614 None:intergenic 50.0%
GGTCGATTACTTCTCGGCTT+TGG + chr3.4:72865848-72865867 MS.gene29831:CDS 50.0%
GGTGGCTATTGTGATGGCAA+TGG + chr3.4:72866990-72867009 MS.gene29831:CDS 50.0%
TAACCCAGCCAGATACAGTG+AGG - chr3.4:72865696-72865715 None:intergenic 50.0%
TCGACCAACCCGATCAACAA+TGG - chr3.4:72866770-72866789 None:intergenic 50.0%
TGTTGCCAAGCAAAGCTGCT+TGG - chr3.4:72866702-72866721 None:intergenic 50.0%
TGTTGCCGCAAAACACCCTT+GGG + chr3.4:72866321-72866340 MS.gene29831:CDS 50.0%
TTGGTGGAGCGATTTCCGAA+AGG - chr3.4:72866225-72866244 None:intergenic 50.0%
TTGTTGCCGCAAAACACCCT+TGG + chr3.4:72866320-72866339 MS.gene29831:CDS 50.0%
! CAAACAGTTTGGTGGAGCGT+GGG + chr3.4:72866422-72866441 MS.gene29831:CDS 50.0%
!! AATGCTCCTCGCCATTTTGG+TGG - chr3.4:72866241-72866260 None:intergenic 50.0%
!! GGGGGGTATCATCTTTCTTG+TGG + chr3.4:72865778-72865797 MS.gene29831:CDS 50.0%
!!! CTGCAGGTTTTGGTTGGTCA+TGG + chr3.4:72867088-72867107 MS.gene29831:CDS 50.0%
!!! GCAGGTTTTGGTTGGTCATG+GGG + chr3.4:72867090-72867109 MS.gene29831:CDS 50.0%
ACGTCCTCACTGTATCTGGC+TGG + chr3.4:72865689-72865708 MS.gene29831:CDS 55.0%
AGAGAGATTCGCCATCCCCA+AGG - chr3.4:72866340-72866359 None:intergenic 55.0%
ATCGCTCCACCAAAATGGCG+AGG + chr3.4:72866232-72866251 MS.gene29831:CDS 55.0%
CCACGCTCCACCAAACTGTT+TGG - chr3.4:72866424-72866443 None:intergenic 55.0%
CGTCCTCACTGTATCTGGCT+GGG + chr3.4:72865690-72865709 MS.gene29831:CDS 55.0%
GAGAGATTCGCCATCCCCAA+GGG - chr3.4:72866339-72866358 None:intergenic 55.0%
GCAATGGCGACTGGTGTTCA+CGG + chr3.4:72867006-72867025 MS.gene29831:CDS 55.0%
GCAGCCTTCTCAAGGACTTC+AGG - chr3.4:72865614-72865633 None:intergenic 55.0%
GGTCACCAAGCAGCTTTGCT+TGG + chr3.4:72866694-72866713 MS.gene29831:CDS 55.0%
GGTCATGGGGTCCTCTATTG+TGG + chr3.4:72867103-72867122 MS.gene29831:CDS 55.0%
GTTGCCGCAAAACACCCTTG+GGG + chr3.4:72866322-72866341 MS.gene29831:CDS 55.0%
TGGGGATGGCGAATCTCTCT+TGG + chr3.4:72866340-72866359 MS.gene29831:CDS 55.0%
! CCAAACAGTTTGGTGGAGCG+TGG + chr3.4:72866421-72866440 MS.gene29831:CDS 55.0%
! GGTGTTTCTACGTCCCAGTG+TGG - chr3.4:72865750-72865769 None:intergenic 55.0%
!! CCGCTTTTGCAGCCTTCTCA+AGG - chr3.4:72865622-72865641 None:intergenic 55.0%
!! CTTGTGGGTGGTGCCATTAC+TGG + chr3.4:72865794-72865813 MS.gene29831:CDS 55.0%
!! GGCGAGGAGCATTAAGCACA+TGG + chr3.4:72866248-72866267 MS.gene29831:CDS 55.0%
!!! AAGTTGGCGTTTTGGCTGCG+GGG + chr3.4:72866287-72866306 MS.gene29831:CDS 55.0%
!!! CAAGTTGGCGTTTTGGCTGC+GGG + chr3.4:72866286-72866305 MS.gene29831:CDS 55.0%
!!! CCATCCCCAAGGGTGTTTTG+CGG - chr3.4:72866329-72866348 None:intergenic 55.0%
!!! GCAAGTTGGCGTTTTGGCTG+CGG + chr3.4:72866285-72866304 MS.gene29831:CDS 55.0%
CCGCAAAACACCCTTGGGGA+TGG + chr3.4:72866326-72866345 MS.gene29831:CDS 60.0%
GCGACTGGTGTTCACGGAAC+AGG + chr3.4:72867012-72867031 MS.gene29831:CDS 60.0%
!! GTGGGTGGTGCCATTACTGG+AGG + chr3.4:72865797-72865816 MS.gene29831:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 72865250 72867422 72865250 ID=MS.gene29831
chr3.4 mRNA 72865250 72867422 72865250 ID=MS.gene29831.t1;Parent=MS.gene29831
chr3.4 exon 72865250 72865382 72865250 ID=MS.gene29831.t1.exon1;Parent=MS.gene29831.t1
chr3.4 CDS 72865250 72865382 72865250 ID=cds.MS.gene29831.t1;Parent=MS.gene29831.t1
chr3.4 exon 72865570 72865889 72865570 ID=MS.gene29831.t1.exon2;Parent=MS.gene29831.t1
chr3.4 CDS 72865570 72865889 72865570 ID=cds.MS.gene29831.t1;Parent=MS.gene29831.t1
chr3.4 exon 72866208 72866834 72866208 ID=MS.gene29831.t1.exon3;Parent=MS.gene29831.t1
chr3.4 CDS 72866208 72866834 72866208 ID=cds.MS.gene29831.t1;Parent=MS.gene29831.t1
chr3.4 exon 72866985 72867422 72866985 ID=MS.gene29831.t1.exon4;Parent=MS.gene29831.t1
chr3.4 CDS 72866985 72867422 72866985 ID=cds.MS.gene29831.t1;Parent=MS.gene29831.t1
Gene Sequence

>MS.gene29831

ATGGCTGGTGGAGGACTCAAAGCAGACACACCAGAAGTGGATGTTGAGAGCAAGATAACAATCTCAGTTGTCATCACTTGCATTGTTGCAGCATCTAGTGGACTCATTTTTGGATATGACCTTGGAATTTCAGGTTCTTTTTTCATGTTATAACTTTCATTATAAATGTTTCTGCTATCCCCTTCTAAAGCATCAAGTATAGAAGCATGATATATTATACATTTATAGTCATTTAAACGAATTTTCGTTGAGATAATTGTAGGTTTTTAAGGTGTTTAAGCTAACCAATTCAATTCTTGATGGAAATGTTAAAATTTCAGGAGGTGTTACTACGATGATGCCATTCCTCGAAAAATTCTTTCCTGAAGTCCTTGAGAAGGCTGCAAAAGCGGAATCAAACACATATTGTGTGTATGATAGTCACATGTTAACATTATTCACGTCCTCACTGTATCTGGCTGGGTTAGTAACTTCTCTAATAGCTAGTCGAATCACATCCACACTGGGACGTAGAAACACCATCATGTTGGGGGGTATCATCTTTCTTGTGGGTGGTGCCATTACTGGAGGTGCTCAAAATATTGCTATGCTCATTATTGGTCGATTACTTCTCGGCTTTGGAATTGGTTTCACTAATCAAGTGAGTTATTCCGTGTAATATTTTATGATTGATTACCATTTTGAATCTTCAAAATGTAGAATTTTGACAAGTAGGTTTCTAAGTTTACGAATCAACAAATTAGTTTGGAAATTGAAGATCGCCAATCAATTTAGATGTTTGTCAATCAATTCAATTGATGAAACTGGATGGCATGATATCGAATTATTGATAGAATTGATTAGCGAAATGCTTAAATTGATTGACAATATTCAATTTTAGAGACTGATTTGACATTTATGATTTTAAAAAAAAAATGTAAATATACAACCATTATTGAAGTATGGCGATTGATTTAAGGCTACTCCATTGTACCTTTCGGAAATCGCTCCACCAAAATGGCGAGGAGCATTAAGCACATGGTTTCAATTTTTTATGCAAGTTGGCGTTTTGGCTGCGGGGTTCATAAACTTTGTTGCCGCAAAACACCCTTGGGGATGGCGAATCTCTCTTGGCTTAGCCGTGGTTCCAGCAGCATTGATCACTATCGGCGCCTTAATTATATACGACACACCAAACAGTTTGGTGGAGCGTGGGAAGATAGATGAAGCCAGAAAAGCTTTGCATAAAATCAGAGGCTCAGACAATGTTGAACCCGAGTTAGAAGAACTTGTTAGACAATCACAATATGCAAAATCTTTGAATCAAGAGCCTTTTTTGACCATATTGGAGAGACAATATCGACCTCACTTGGTGATAGCAGTTGCTATTCCGCTTTTTCAACAACTCACGGGGATCAATATGGTTGCATTCTATGCACCTAACCTTTTTGTATCGATTGGGTTTGGTCACCAAGCAGCTTTGCTTGGCAACATTATACTTGGACTTGTTAACATTGTTTCAGTCATCGTCTTCTCAACCATTGTTGATCGGGTTGGTCGAAGAGTCTTGTTCATCATAGGTGGCATTCAGATGCTTATCAGTCAAGTAAGCTTAATACTACCTAGATTTCTATCTTTAATTCTCCCGGCACTAAATTTAGTTTAGAAATTAGATAGAGATAGTACTATATTACACACATAATTTGCATTGCGCATCTTATTATGTTACTAATTTGTGTTATCTATTGCTATGAAGATTGCGGTGGCTATTGTGATGGCAATGGCGACTGGTGTTCACGGAACAGGTAGCATATCGAAGGGAAATGATACATTGTTATTAGTGTTGATGAGTGTCTACTCTGCAGGTTTTGGTTGGTCATGGGGTCCTCTATTGTGGATAATTCCAAGTGAAATTTTTCCTTTGAAAATCAGAACAACTGGACAAAGCATAGCTATTTCTGTGCAATTCATAACTATATTTGTGTTGTCTCAGACATTCATGGCAATGTTATGTCACTTGAAGTATGGTGCTTTCTTGTTCCATGGTACTTGGATTGTTGTCATGACCCTCTTTATTATACTCTTCTTGCCTGAAACCAAAGGACTTCATTTGGATTCAATCTATGACATATGGTGTAAACACTGGTATTGGCGCTACTACGTTAAAGGAGACGTTACAAAAAATCAAAACTGA
Protein sequence

>MS.gene29831.t1

MAGGGLKADTPEVDVESKITISVVITCIVAASSGLIFGYDLGISGGVTTMMPFLEKFFPEVLEKAAKAESNTYCVYDSHMLTLFTSSLYLAGLVTSLIASRITSTLGRRNTIMLGGIIFLVGGAITGGAQNIAMLIIGRLLLGFGIGFTNQATPLYLSEIAPPKWRGALSTWFQFFMQVGVLAAGFINFVAAKHPWGWRISLGLAVVPAALITIGALIIYDTPNSLVERGKIDEARKALHKIRGSDNVEPELEELVRQSQYAKSLNQEPFLTILERQYRPHLVIAVAIPLFQQLTGINMVAFYAPNLFVSIGFGHQAALLGNIILGLVNIVSVIVFSTIVDRVGRRVLFIIGGIQMLISQIAVAIVMAMATGVHGTGSISKGNDTLLLVLMSVYSAGFGWSWGPLLWIIPSEIFPLKIRTTGQSIAISVQFITIFVLSQTFMAMLCHLKYGAFLFHGTWIVVMTLFIILFLPETKGLHLDSIYDIWCKHWYWRYYVKGDVTKNQN