Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31349.t1 | AES67379.2 | 98.1 | 691 | 12 | 1 | 194 | 884 | 534 | 1223 | 0.00E+00 | 1377.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31349.t1 | G7IU29 | 98.1 | 691 | 12 | 1 | 194 | 884 | 534 | 1223 | 0.0e+00 | 1377.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene31349 | 0.838239 | 3.24E-57 | -1.69E-46 |
| MS.gene049254 | MS.gene31349 | 0.824699 | 7.01E-54 | -1.69E-46 |
| MS.gene049343 | MS.gene31349 | 0.826311 | 2.91E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene31349 | 0.815535 | 8.79E-52 | -1.69E-46 |
| MS.gene049672 | MS.gene31349 | 0.80448 | 2.12E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene31349 | 0.821641 | 3.62E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene31349 | 0.823791 | 1.15E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene31349 | 0.834196 | 3.45E-56 | -1.69E-46 |
| MS.gene05045 | MS.gene31349 | 0.805379 | 1.37E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene31349 | 0.839125 | 1.91E-57 | -1.69E-46 |
| MS.gene051279 | MS.gene31349 | 0.809337 | 1.99E-50 | -1.69E-46 |
| MS.gene051332 | MS.gene31349 | 0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene31349 | 0.809786 | 1.59E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene31349 | 0.830282 | 3.21E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene31349 | 0.859229 | 4.78E-63 | -1.69E-46 |
| MS.gene052168 | MS.gene31349 | 0.800482 | 1.41E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene31349 | 0.803641 | 3.16E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene31349 | 0.813286 | 2.76E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene31349 | 0.805059 | 1.60E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene31349 | 0.815553 | 8.72E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene31349 | 0.828596 | 8.23E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene31349 | 0.809158 | 2.17E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene31349 | 0.826874 | 2.14E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene31349 | 0.818211 | 2.21E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene31349 | 0.83214 | 1.12E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene31349 | 0.851062 | 1.13E-60 | -1.69E-46 |
| MS.gene053296 | MS.gene31349 | 0.800598 | 1.34E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene31349 | 0.805568 | 1.25E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene31349 | 0.818116 | 2.32E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene31349 | 0.819798 | 9.61E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene31349 | 0.817909 | 2.58E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene31349 | 0.820119 | 8.12E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene31349 | 0.807572 | 4.73E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene31349 | 0.808347 | 3.24E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene31349 | -0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene31349 | 0.819056 | 1.42E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene31349 | 0.804348 | 2.26E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene31349 | 0.847252 | 1.30E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene31349 | 0.80354 | 3.32E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene31349 | 0.830195 | 3.37E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene31349 | 0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene31349 | 0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene31349 | 0.80805 | 3.75E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene31349 | 0.81103 | 8.58E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene31349 | 0.80211 | 6.55E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene31349 | 0.81788 | 2.62E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene31349 | 0.801492 | 8.78E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene31349 | 0.823121 | 1.64E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene31349 | 0.835404 | 1.71E-56 | -1.69E-46 |
| MS.gene058668 | MS.gene31349 | 0.82039 | 7.03E-53 | -1.69E-46 |
| MS.gene05894 | MS.gene31349 | 0.800384 | 1.48E-48 | -1.69E-46 |
| MS.gene059015 | MS.gene31349 | 0.804685 | 1.92E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene31349 | 0.802597 | 5.20E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene31349 | 0.817958 | 2.52E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene31349 | 0.83041 | 2.98E-55 | -1.69E-46 |
| MS.gene060519 | MS.gene31349 | 0.819625 | 1.05E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31349.t1 | MTR_2g092960 | 94.983 | 897 | 31 | 2 | 1 | 884 | 328 | 1223 | 0.0 | 1764 |
| MS.gene31349.t1 | MTR_8g017000 | 51.549 | 710 | 320 | 11 | 180 | 883 | 1 | 692 | 0.0 | 735 |
| MS.gene31349.t1 | MTR_2g037270 | 51.408 | 710 | 321 | 11 | 180 | 883 | 1 | 692 | 0.0 | 734 |
| MS.gene31349.t1 | MTR_3g011560 | 51.058 | 709 | 312 | 11 | 180 | 883 | 1 | 679 | 0.0 | 722 |
| MS.gene31349.t1 | MTR_0462s0020 | 50.512 | 293 | 142 | 2 | 585 | 876 | 1 | 291 | 2.97e-104 | 325 |
| MS.gene31349.t1 | MTR_4g048180 | 40.549 | 328 | 132 | 4 | 549 | 876 | 5 | 269 | 7.71e-77 | 251 |
| MS.gene31349.t1 | MTR_2g023630 | 34.852 | 439 | 163 | 11 | 446 | 880 | 1 | 320 | 5.73e-62 | 213 |
| MS.gene31349.t1 | MTR_7g046380 | 36.842 | 247 | 146 | 5 | 632 | 869 | 152 | 397 | 3.86e-46 | 171 |
| MS.gene31349.t1 | MTR_7g046380 | 41.667 | 168 | 73 | 6 | 404 | 547 | 5 | 171 | 7.77e-17 | 84.0 |
| MS.gene31349.t1 | MTR_0002s1270 | 36.614 | 254 | 151 | 5 | 633 | 877 | 145 | 397 | 1.47e-45 | 169 |
| MS.gene31349.t1 | MTR_5g077900 | 38.532 | 218 | 128 | 4 | 665 | 877 | 7 | 223 | 4.88e-44 | 159 |
| MS.gene31349.t1 | MTR_4g050295 | 40.179 | 224 | 117 | 7 | 467 | 689 | 27 | 234 | 5.72e-42 | 155 |
| MS.gene31349.t1 | MTR_6g006270 | 53.465 | 101 | 47 | 0 | 548 | 648 | 79 | 179 | 3.63e-30 | 119 |
| MS.gene31349.t1 | MTR_5g092250 | 39.796 | 98 | 51 | 1 | 664 | 761 | 33 | 122 | 2.02e-16 | 80.9 |
| MS.gene31349.t1 | MTR_5g020725 | 67.391 | 46 | 15 | 0 | 417 | 462 | 5 | 50 | 1.52e-12 | 63.9 |
| MS.gene31349.t1 | MTR_4g066310 | 35.385 | 130 | 75 | 4 | 426 | 547 | 11 | 139 | 3.01e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 200 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAAATTCATTCAGATATT+TGG | 0.056238 | 2.4:+8854330 | MS.gene31349:intron |
| GACAAAGTTCAAGAGTTATT+TGG | 0.142341 | 2.4:+8851741 | MS.gene31349:CDS |
| GCGACTGGACCCTGCCTTTC+AGG | 0.156060 | 2.4:+8852124 | MS.gene31349:CDS |
| GATATATACATGGGGATCTT+AGG | 0.202919 | 2.4:+8852036 | MS.gene31349:CDS |
| ACAAGGACGTAAAGATATTT+TGG | 0.221355 | 2.4:+8852594 | MS.gene31349:CDS |
| TAGTTGAGGGTTTGACCTTT+TGG | 0.228086 | 2.4:-8853286 | None:intergenic |
| AATACTACATTATTCTTCTT+AGG | 0.228253 | 2.4:-8853835 | None:intergenic |
| ATATGGGATGTTCCTAATTC+TGG | 0.229524 | 2.4:+8851942 | MS.gene31349:CDS |
| GTTGTGTAATATAGAAAATA+TGG | 0.260176 | 2.4:+8851925 | MS.gene31349:intron |
| GACTCCCAGGATGCAATTTC+CGG | 0.261380 | 2.4:+8849773 | MS.gene31349:CDS |
| TTCCTCATCAAGAAAATTAT+AGG | 0.264005 | 2.4:-8852078 | None:intergenic |
| TTTCGTAAGAAGCCAGAATT+AGG | 0.274071 | 2.4:-8851954 | None:intergenic |
| CGAATGTGAAGGATGAAATT+TGG | 0.275808 | 2.4:+8851821 | MS.gene31349:CDS |
| TGTACTTACTTATTGTAATA+AGG | 0.278754 | 2.4:-8853708 | None:intergenic |
| GCTCTCACAGAGAGATATTA+TGG | 0.299040 | 2.4:+8853398 | MS.gene31349:CDS |
| GAAGACTCACTTTGAGTTGT+TGG | 0.306920 | 2.4:-8849853 | None:intergenic |
| ACAAAGTTCAAGAGTTATTT+GGG | 0.315689 | 2.4:+8851742 | MS.gene31349:CDS |
| GAAATTGCATCCTGGGAGTC+TGG | 0.322509 | 2.4:-8849770 | None:intergenic |
| CAATCAACTGGGAAATCAAT+AGG | 0.331616 | 2.4:+8851709 | MS.gene31349:CDS |
| ATTGAATTTGATCAATCAAC+TGG | 0.335377 | 2.4:+8851697 | MS.gene31349:CDS |
| AAAACAAAAGCAAGATTCAT+TGG | 0.336900 | 2.4:+8852331 | MS.gene31349:CDS |
| ATGATAGAATGAAGTCTCTT+TGG | 0.348872 | 2.4:+8853376 | MS.gene31349:CDS |
| TCTCTTGCATTATCTTCTCT+TGG | 0.351555 | 2.4:-8852304 | None:intergenic |
| ACATACAATTCACATCGTTC+TGG | 0.352659 | 2.4:-8852925 | None:intergenic |
| CTCGCAGGTACAACGGTATT+AGG | 0.358068 | 2.4:-8852850 | None:intergenic |
| CTGATGGGATTATTGATTCA+TGG | 0.372249 | 2.4:+8854229 | MS.gene31349:CDS |
| TATGGCAATATTTACAAGTT+GGG | 0.375860 | 2.4:+8852973 | MS.gene31349:CDS |
| AATCAACTGGGAAATCAATA+GGG | 0.376514 | 2.4:+8851710 | MS.gene31349:CDS |
| CTGGCTTCTTACGAAAGAAA+TGG | 0.376567 | 2.4:+8851961 | MS.gene31349:CDS |
| TGCAATTTCCAGAGGATTCT+CGG | 0.378854 | 2.4:+8849664 | MS.gene31349:CDS |
| AGAGGAATTGATGCAGGATC+TGG | 0.380173 | 2.4:+8852780 | MS.gene31349:CDS |
| TCAAATGTTTAGGATGTTGA+TGG | 0.382640 | 2.4:+8853240 | MS.gene31349:intron |
| ATATATACATGGGGATCTTA+GGG | 0.384969 | 2.4:+8852037 | MS.gene31349:CDS |
| TTCAGAAGGTTCTCAGAGAA+TGG | 0.387935 | 2.4:+8849461 | MS.gene31349:CDS |
| TGCAATTTCCAGAGGATTCT+CGG | 0.389383 | 2.4:+8849697 | MS.gene31349:CDS |
| ACTAGATTCTGTTCAACAAT+TGG | 0.391789 | 2.4:+8853305 | MS.gene31349:CDS |
| TTCTTCAATGTAGTCGTCAT+TGG | 0.391932 | 2.4:+8853794 | MS.gene31349:intron |
| TGTGGAGATTGTTTCTGATA+AGG | 0.398799 | 2.4:+8853149 | MS.gene31349:CDS |
| CGGTATTAGGAGAGTGGGTT+GGG | 0.399694 | 2.4:-8852837 | None:intergenic |
| ACTGAGGATCTAACCTGCTT+CGG | 0.401096 | 2.4:-8851597 | None:intergenic |
| ATTTCATCCTCCTCTGGTAT+AGG | 0.406243 | 2.4:-8852901 | None:intergenic |
| CCACAATCGTAGAATAGTTA+TGG | 0.407588 | 2.4:-8853448 | None:intergenic |
| GTGGGTAAGAGTGACTTATA+TGG | 0.409433 | 2.4:+8853582 | MS.gene31349:CDS |
| AGATATTATGGAGTTGTGTA+TGG | 0.410122 | 2.4:+8853410 | MS.gene31349:CDS |
| GCAAGATTCATTGGGTGATT+CGG | 0.412865 | 2.4:+8852340 | MS.gene31349:CDS |
| TTAATTCTTGAATTTATTCA+AGG | 0.412870 | 2.4:+8854411 | MS.gene31349:CDS |
| CTGAGGATCTAACCTGCTTC+GGG | 0.418457 | 2.4:-8851596 | None:intergenic |
| TTCTAGTATCTGATTATGTA+TGG | 0.423796 | 2.4:-8853001 | None:intergenic |
| TCAGATACTAGAAAATGATA+TGG | 0.425143 | 2.4:+8853011 | MS.gene31349:CDS |
| TCCTCCGGAAATTGCATCCT+GGG | 0.429195 | 2.4:-8849777 | None:intergenic |
| TTTCTTCATGCAGTGGCCTA+TGG | 0.431013 | 2.4:+8852955 | MS.gene31349:CDS |
| AAGAGTTATTTGGGTTTCCT+TGG | 0.435068 | 2.4:+8851751 | MS.gene31349:CDS |
| CTCTGAGTCCGAGAATCCTC+TGG | 0.438453 | 2.4:-8849672 | None:intergenic |
| CATATGTGGGCGAGCGTTGG+AGG | 0.440328 | 2.4:+8851988 | MS.gene31349:CDS |
| TTAATACTATCATAGAGCTT+TGG | 0.441420 | 2.4:+8853986 | MS.gene31349:intron |
| TTCCATTGCTCATGGCGTGC+TGG | 0.442853 | 2.4:-8852383 | None:intergenic |
| CCATTGAATAAAATTGTTGA+GGG | 0.448770 | 2.4:-8853115 | None:intergenic |
| CATACAATTCACATCGTTCT+GGG | 0.449635 | 2.4:-8852924 | None:intergenic |
| ATGTAGGCCTCAGCATTACT+TGG | 0.450422 | 2.4:-8853642 | None:intergenic |
| TTAAACTTGCACAACGTTGT+CGG | 0.451793 | 2.4:-8854392 | None:intergenic |
| AAAGAAATGGATTGCATATG+TGG | 0.454826 | 2.4:+8851974 | MS.gene31349:CDS |
| ATCCTTCACATTCGCATCTA+CGG | 0.455050 | 2.4:-8851812 | None:intergenic |
| TGAAATTTGGACAGAGATCC+TGG | 0.457732 | 2.4:+8851834 | MS.gene31349:CDS |
| GTGGGTATTAAGCAATACTT+TGG | 0.461383 | 2.4:+8852673 | MS.gene31349:CDS |
| TGCATCCTCCGAGAATCCTC+TGG | 0.463974 | 2.4:-8849705 | None:intergenic |
| AAACAAAAGCAAGATTCATT+GGG | 0.466563 | 2.4:+8852332 | MS.gene31349:CDS |
| CAAGAGATTCTCAGACTCAA+AGG | 0.468245 | 2.4:+8849580 | MS.gene31349:CDS |
| CAAAGGATTCCCAGACTCCC+AGG | 0.468726 | 2.4:+8849760 | MS.gene31349:CDS |
| TGAGGTGGAAACGGTTGGGC+AGG | 0.472912 | 2.4:+8853092 | MS.gene31349:CDS |
| GTTGAACAGAATCTAGTTGA+GGG | 0.476248 | 2.4:-8853299 | None:intergenic |
| TCTGGGATTTCATCCTCCTC+TGG | 0.476626 | 2.4:-8852907 | None:intergenic |
| TATCAGCTCCTTCCCGAAGC+AGG | 0.483935 | 2.4:+8851584 | MS.gene31349:CDS |
| GATGCAGGATCTGGAAGCTA+TGG | 0.484325 | 2.4:+8852789 | MS.gene31349:CDS |
| GTTCAAGTAACCTGAAAGGC+AGG | 0.485139 | 2.4:-8852134 | None:intergenic |
| GCTTTCTTTCCAGCGAACAT+AGG | 0.488543 | 2.4:-8853858 | None:intergenic |
| GTTGTACCTGCGAGCACAAA+GGG | 0.489013 | 2.4:+8852859 | MS.gene31349:CDS |
| AAAGAAAGCTCAAATGAGTT+CGG | 0.490228 | 2.4:+8852232 | MS.gene31349:CDS |
| GTTGATTGATCAAATTCAAT+CGG | 0.494512 | 2.4:-8851694 | None:intergenic |
| TGCATTCTCTGAGAATCCTC+TGG | 0.495574 | 2.4:-8849612 | None:intergenic |
| AAGACAATGTTTCACCCAAA+AGG | 0.496909 | 2.4:+8853271 | MS.gene31349:CDS |
| GATTATTGATTCATGGAAGA+AGG | 0.498842 | 2.4:+8854236 | MS.gene31349:CDS |
| CCATAACTATTCTACGATTG+TGG | 0.504284 | 2.4:+8853448 | MS.gene31349:CDS |
| CTGATGAGGTGGAAACGGTT+GGG | 0.506355 | 2.4:+8853088 | MS.gene31349:CDS |
| AGAATCTATAAAGCTTGAGT+TGG | 0.506939 | 2.4:+8853350 | MS.gene31349:CDS |
| TGTAGTATTCCTATGTTCGC+TGG | 0.508486 | 2.4:+8853849 | MS.gene31349:CDS |
| AGAGCCCGACAAAAGCCATC+AGG | 0.510661 | 2.4:+8852407 | MS.gene31349:CDS |
| ATCCTCCGGAAATTGCATCC+TGG | 0.511074 | 2.4:-8849778 | None:intergenic |
| GCCATTGAATAAAATTGTTG+AGG | 0.511961 | 2.4:-8853116 | None:intergenic |
| CTATGGCAATATTTACAAGT+TGG | 0.513210 | 2.4:+8852972 | MS.gene31349:CDS |
| GGGCTCTCTTCCATTGCTCA+TGG | 0.515667 | 2.4:-8852391 | None:intergenic |
| ACTGATGAGGTGGAAACGGT+TGG | 0.516247 | 2.4:+8853087 | MS.gene31349:CDS |
| TCATGGCGTGCTGGTGGAGA+TGG | 0.517032 | 2.4:-8852374 | None:intergenic |
| TTTGTTCGTGGTGTTGGTCG+AGG | 0.524167 | 2.4:+8852649 | MS.gene31349:CDS |
| TCATCCTCATCGAATGGCTC+AGG | 0.524224 | 2.4:-8854357 | None:intergenic |
| CGTGGTGTTGGTCGAGGTGT+GGG | 0.525314 | 2.4:+8852655 | MS.gene31349:CDS |
| CCCCTCACAGATTGTCTCGT+GGG | 0.526889 | 2.4:+8852267 | MS.gene31349:CDS |
| GCTTACTCAGCAAATTAAAG+AGG | 0.528481 | 2.4:+8852762 | MS.gene31349:CDS |
| TAGCCGCACTCATAACTCTC+AGG | 0.529134 | 2.4:-8854174 | None:intergenic |
| GAATCGCCTCTCAATTAATG+TGG | 0.531144 | 2.4:+8853563 | MS.gene31349:CDS |
| ACAATTGAAGACCATAAAAG+TGG | 0.531744 | 2.4:+8852738 | MS.gene31349:CDS |
| TGCATCCTCTGAGAATCCTC+CGG | 0.534323 | 2.4:-8849792 | None:intergenic |
| AAATTGCATCCTGGGAGTCT+GGG | 0.535734 | 2.4:-8849769 | None:intergenic |
| CATTGCTCATGGCGTGCTGG+TGG | 0.536323 | 2.4:-8852380 | None:intergenic |
| AAGAGATTCTCAGACTCAAA+GGG | 0.537731 | 2.4:+8849581 | MS.gene31349:CDS |
| GAGTGGGTTGGGAAATTCGA+GGG | 0.537747 | 2.4:-8852826 | None:intergenic |
| ATGCAGGATCTGGAAGCTAT+GGG | 0.538205 | 2.4:+8852790 | MS.gene31349:CDS |
| CACCAGCACGCCATGAGCAA+TGG | 0.538655 | 2.4:+8852381 | MS.gene31349:CDS |
| TTGCATATGTGGGCGAGCGT+TGG | 0.540260 | 2.4:+8851985 | MS.gene31349:CDS |
| GCCCACTGATGAGGTGGAAA+CGG | 0.543518 | 2.4:+8853083 | MS.gene31349:CDS |
| GAACTACCCTTTGTGCTCGC+AGG | 0.546113 | 2.4:-8852865 | None:intergenic |
| TACTATCATAGAGCTTTGGA+TGG | 0.549154 | 2.4:+8853990 | MS.gene31349:intron |
| TTGTGTAATATAGAAAATAT+GGG | 0.550940 | 2.4:+8851926 | MS.gene31349:intron |
| AATTAAAGAGGAATTGATGC+AGG | 0.552547 | 2.4:+8852774 | MS.gene31349:CDS |
| AGTATCTGATTATGTATGGT+AGG | 0.552558 | 2.4:-8852997 | None:intergenic |
| ACGGTATTAGGAGAGTGGGT+TGG | 0.553692 | 2.4:-8852838 | None:intergenic |
| TTAGCACTTGACCGTACTGA+TGG | 0.556532 | 2.4:+8851661 | MS.gene31349:CDS |
| ATGTTGAAAATTGTATCTGA+TGG | 0.556750 | 2.4:+8854213 | MS.gene31349:CDS |
| ATGGCAATATTTACAAGTTG+GGG | 0.558612 | 2.4:+8852974 | MS.gene31349:CDS |
| TCATCCTCCTCTGGTATAGG+AGG | 0.558689 | 2.4:-8852898 | None:intergenic |
| AAAATATCTTTACGTCCTTG+TGG | 0.558947 | 2.4:-8852592 | None:intergenic |
| GATATTATGGAGTTGTGTAT+GGG | 0.560819 | 2.4:+8853411 | MS.gene31349:CDS |
| TCTGATGTGTAATCTCCTGA+TGG | 0.561489 | 2.4:-8852422 | None:intergenic |
| ATATGTGGGCGAGCGTTGGA+GGG | 0.562303 | 2.4:+8851989 | MS.gene31349:CDS |
| AACCGTTTCCACCTCATCAG+TGG | 0.562524 | 2.4:-8853085 | None:intergenic |
| CGAACAAAACCAGAGTGCTC+AGG | 0.564100 | 2.4:-8852634 | None:intergenic |
| TCGTGGTGTTGGTCGAGGTG+TGG | 0.566638 | 2.4:+8852654 | MS.gene31349:CDS |
| CAAAGGATTCTCAGACTCAG+AGG | 0.566977 | 2.4:+8849640 | MS.gene31349:CDS |
| AGCGTTTGTTCAGATGCGAC+TGG | 0.567532 | 2.4:+8852109 | MS.gene31349:CDS |
| TTGACTTCTAGATATATACA+TGG | 0.567563 | 2.4:+8852026 | MS.gene31349:CDS |
| ATAAGTTCATCCTCATCGAA+TGG | 0.570256 | 2.4:-8854363 | None:intergenic |
| TGTTGAACAGAATCTAGTTG+AGG | 0.570297 | 2.4:-8853300 | None:intergenic |
| ATTGGCAAACCTGAGCACTC+TGG | 0.570492 | 2.4:+8852625 | MS.gene31349:CDS |
| TGACTTCTAGATATATACAT+GGG | 0.570770 | 2.4:+8852027 | MS.gene31349:CDS |
| AGAGTGGGTTGGGAAATTCG+AGG | 0.573993 | 2.4:-8852827 | None:intergenic |
| ACTTATTGTAATAAGGTGCT+AGG | 0.575296 | 2.4:-8853701 | None:intergenic |
| TTCAAAAGAAGAAGCCAACA+TGG | 0.575873 | 2.4:+8854033 | MS.gene31349:CDS |
| CTGGTCGAGAAAACAGCTCA+AGG | 0.576958 | 2.4:+8852559 | MS.gene31349:CDS |
| GGTGAGGGTGGTTGTTAGCG+AGG | 0.579694 | 2.4:+8853032 | MS.gene31349:CDS |
| ACCGTTTCCACCTCATCAGT+GGG | 0.579868 | 2.4:-8853084 | None:intergenic |
| GAGTGGAATCGTCGAAGCAG+CGG | 0.582766 | 2.4:+8849361 | MS.gene31349:CDS |
| TAAAGGATTCTCAGATTCGG+TGG | 0.585078 | 2.4:+8849490 | MS.gene31349:CDS |
| TACTAGAAAATGATATGGTG+AGG | 0.585502 | 2.4:+8853016 | MS.gene31349:CDS |
| CAACTTGTAAATATTGCCAT+AGG | 0.591545 | 2.4:-8852971 | None:intergenic |
| AATCGCCTCTCAATTAATGT+GGG | 0.593317 | 2.4:+8853564 | MS.gene31349:CDS |
| ATCAACTGGGAAATCAATAG+GGG | 0.594644 | 2.4:+8851711 | MS.gene31349:CDS |
| GGGGTGGAATCACGTGAAAG+TGG | 0.594772 | 2.4:-8852697 | None:intergenic |
| GCCTATGCCCACTGATGAGG+TGG | 0.596324 | 2.4:+8853077 | MS.gene31349:CDS |
| CCCTCACAGATTGTCTCGTG+GGG | 0.598176 | 2.4:+8852268 | MS.gene31349:CDS |
| TACAACGGTATTAGGAGAGT+GGG | 0.599121 | 2.4:-8852842 | None:intergenic |
| TGGCGTGCTGGTGGAGATGG+AGG | 0.601012 | 2.4:-8852371 | None:intergenic |
| TCTTACCCACATTAATTGAG+AGG | 0.603015 | 2.4:-8853569 | None:intergenic |
| TGTTGAAAATTGTATCTGAT+GGG | 0.603161 | 2.4:+8854214 | MS.gene31349:CDS |
| AGAGTGCTCAGGTTTGCCAA+TGG | 0.603852 | 2.4:-8852623 | None:intergenic |
| ATAAGTTCAAGTAACCTGAA+AGG | 0.603929 | 2.4:-8852138 | None:intergenic |
| TTGTTGTTTAAATAGACACA+TGG | 0.605161 | 2.4:+8851555 | MS.gene31349:intron |
| TTCCGTAGATGCGAATGTGA+AGG | 0.608396 | 2.4:+8851810 | MS.gene31349:CDS |
| TAGTGAAGTACATGAAAGAG+TGG | 0.609138 | 2.4:+8849344 | MS.gene31349:CDS |
| TGCTAACTTCTTCATCAGTG+TGG | 0.610615 | 2.4:-8851644 | None:intergenic |
| CCCCACGAGACAATCTGTGA+GGG | 0.612279 | 2.4:-8852268 | None:intergenic |
| AGTGCCTATGCCCACTGATG+AGG | 0.613534 | 2.4:+8853074 | MS.gene31349:CDS |
| GCTAACTTCTTCATCAGTGT+GGG | 0.616189 | 2.4:-8851643 | None:intergenic |
| TCAGAGGATACAATCTTCAG+AGG | 0.616507 | 2.4:+8849536 | MS.gene31349:CDS |
| TTCAAGTAACCTGAAAGGCA+GGG | 0.617461 | 2.4:-8852133 | None:intergenic |
| CGTTGTACCTGCGAGCACAA+AGG | 0.617783 | 2.4:+8852858 | MS.gene31349:CDS |
| TGTTGACTTTGAATGAAACA+TGG | 0.618533 | 2.4:-8853615 | None:intergenic |
| ACTAGAAAATGATATGGTGA+GGG | 0.621336 | 2.4:+8853017 | MS.gene31349:CDS |
| CAGAGGATTCTCGGACTCAG+AGG | 0.624663 | 2.4:+8849673 | MS.gene31349:CDS |
| CGTTGTGCCTCCTATACCAG+AGG | 0.630159 | 2.4:+8852891 | MS.gene31349:CDS |
| CTTTGTGCTCGCAGGTACAA+CGG | 0.631658 | 2.4:-8852857 | None:intergenic |
| AAGAAATGGATTGCATATGT+GGG | 0.632917 | 2.4:+8851975 | MS.gene31349:CDS |
| TCCCAGGATGCAATTTCCGG+AGG | 0.634579 | 2.4:+8849776 | MS.gene31349:CDS |
| GGATCTAACCTGCTTCGGGA+AGG | 0.636341 | 2.4:-8851592 | None:intergenic |
| TAGGGGACAATCGCCTCTCG+AGG | 0.637360 | 2.4:+8852055 | MS.gene31349:CDS |
| GTACAACGGTATTAGGAGAG+TGG | 0.638670 | 2.4:-8852843 | None:intergenic |
| GATGGATATCATAAGCTGCA+AGG | 0.639332 | 2.4:+8854008 | MS.gene31349:CDS |
| GTATCCTTTGTCCATCAGTA+CGG | 0.641186 | 2.4:-8851672 | None:intergenic |
| AGAAAATGATATGGTGAGGG+TGG | 0.643088 | 2.4:+8853020 | MS.gene31349:CDS |
| TTGAATTTGATCAATCAACT+GGG | 0.645094 | 2.4:+8851698 | MS.gene31349:CDS |
| TCAGAGGATGCAATTTCCAG+AGG | 0.645963 | 2.4:+8849656 | MS.gene31349:CDS |
| TCAGAGGATGCAATTTCCAG+AGG | 0.645963 | 2.4:+8849689 | MS.gene31349:CDS |
| ATCAGGAGATTACACATCAG+AGG | 0.647952 | 2.4:+8852424 | MS.gene31349:CDS |
| TGTGCCTCCTATACCAGAGG+AGG | 0.648953 | 2.4:+8852894 | MS.gene31349:CDS |
| ACCCCTCACAGATTGTCTCG+TGG | 0.649609 | 2.4:+8852266 | MS.gene31349:CDS |
| GACTTCTAGATATATACATG+GGG | 0.652113 | 2.4:+8852028 | MS.gene31349:CDS |
| TATATACATGGGGATCTTAG+GGG | 0.653509 | 2.4:+8852038 | MS.gene31349:CDS |
| TCCACCTCATCAGTGGGCAT+AGG | 0.655000 | 2.4:-8853078 | None:intergenic |
| CAGAGGATACAATCTTCAGA+GGG | 0.656447 | 2.4:+8849537 | MS.gene31349:CDS |
| ACGACAGGGACAATCCATGT+TGG | 0.656668 | 2.4:-8854047 | None:intergenic |
| ACATGATCCAAGTAATGCTG+AGG | 0.659330 | 2.4:+8853635 | MS.gene31349:CDS |
| CTCTGGTATAGGAGGCACAA+CGG | 0.681623 | 2.4:-8852890 | None:intergenic |
| TCAAAGGGTGCAATATCCAG+AGG | 0.681673 | 2.4:+8849596 | MS.gene31349:CDS |
| AGAAAATTATAGGCCTCGAG+AGG | 0.687645 | 2.4:-8852068 | None:intergenic |
| AAATCCTGAGCCATTCGATG+AGG | 0.689499 | 2.4:+8854353 | MS.gene31349:CDS |
| TTGACCGTACTGATGGACAA+AGG | 0.697921 | 2.4:+8851668 | MS.gene31349:CDS |
| CCCACGAGACAATCTGTGAG+GGG | 0.701434 | 2.4:-8852267 | None:intergenic |
| CCTCACAGATTGTCTCGTGG+GGG | 0.705999 | 2.4:+8852269 | MS.gene31349:CDS |
| AATCTTCAGAGGGTTCTCAG+AGG | 0.735908 | 2.4:+8849547 | MS.gene31349:CDS |
| CAACCTGAGAGTTATGAGTG+CGG | 0.745301 | 2.4:+8854171 | MS.gene31349:CDS |
| AATTTCCGGAGGATTCTCAG+AGG | 0.761842 | 2.4:+8849787 | MS.gene31349:CDS |
| AATTTCCAGAGGATTCTCGG+AGG | 0.786184 | 2.4:+8849700 | MS.gene31349:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATATATGATGATTT+CGG | + | chr2.4:8851107-8851126 | MS.gene31349:intron | 10.0% |
| !!! | TTTAGTTTATTTATTATACA+TGG | + | chr2.4:8853919-8853938 | MS.gene31349:intron | 10.0% |
| !! | ATATTATATATGATGATTTC+GGG | + | chr2.4:8851108-8851127 | MS.gene31349:intron | 15.0% |
| !! | ATCACTTATTATATAATAGA+GGG | - | chr2.4:8850784-8850803 | None:intergenic | 15.0% |
| !! | TTAATTCTTGAATTTATTCA+AGG | + | chr2.4:8854411-8854430 | MS.gene31349:CDS | 15.0% |
| !! | TTAGCTAAGTTTATAAAAAA+AGG | - | chr2.4:8853486-8853505 | None:intergenic | 15.0% |
| !! | TTGTGTAATATAGAAAATAT+GGG | + | chr2.4:8851926-8851945 | MS.gene31349:intron | 15.0% |
| !! | TTTGGTACTAAAAATAAATT+TGG | - | chr2.4:8852179-8852198 | None:intergenic | 15.0% |
| !!! | GTTTGAATAATATTTTTATC+TGG | - | chr2.4:8853883-8853902 | None:intergenic | 15.0% |
| !!! | TACTTCAATTTCAATATTTT+AGG | + | chr2.4:8853535-8853554 | MS.gene31349:intron | 15.0% |
| !! | AAATTATTGAGATATACTCA+TGG | - | chr2.4:8851418-8851437 | None:intergenic | 20.0% |
| !! | AACATTTCTCTTATCTAATT+GGG | + | chr2.4:8850931-8850950 | MS.gene31349:intron | 20.0% |
| !! | AATACTACATTATTCTTCTT+AGG | - | chr2.4:8853838-8853857 | None:intergenic | 20.0% |
| !! | ACATTAAGGAAATAGAAATT+TGG | - | chr2.4:8850745-8850764 | None:intergenic | 20.0% |
| !! | ACTTGAACTTATAATTTAGT+TGG | + | chr2.4:8852149-8852168 | MS.gene31349:intron | 20.0% |
| !! | AGTAATCAAAGTAAAAACTA+CGG | - | chr2.4:8851294-8851313 | None:intergenic | 20.0% |
| !! | CAAAAATAATTACAATTACC+AGG | - | chr2.4:8851855-8851874 | None:intergenic | 20.0% |
| !! | CATCACTTATTATATAATAG+AGG | - | chr2.4:8850785-8850804 | None:intergenic | 20.0% |
| !! | CATTAATTAACATATTCAAG+AGG | - | chr2.4:8853213-8853232 | None:intergenic | 20.0% |
| !! | CCATATGAATTAATTATATC+CGG | - | chr2.4:8851001-8851020 | None:intergenic | 20.0% |
| !! | GCAATCAAAGTATATATTAT+TGG | - | chr2.4:8851449-8851468 | None:intergenic | 20.0% |
| !! | GTTGTGTAATATAGAAAATA+TGG | + | chr2.4:8851925-8851944 | MS.gene31349:intron | 20.0% |
| !! | TAACATTTCTCTTATCTAAT+TGG | + | chr2.4:8850930-8850949 | MS.gene31349:intron | 20.0% |
| !! | TATATAATAGAGGGAAATAA+TGG | - | chr2.4:8850775-8850794 | None:intergenic | 20.0% |
| !! | TCAAAATTCATTCAGATATT+TGG | + | chr2.4:8854330-8854349 | MS.gene31349:intron | 20.0% |
| !! | TGAAATAAAACTATCATATG+TGG | - | chr2.4:8851359-8851378 | None:intergenic | 20.0% |
| !! | TGTACTTACTTATTGTAATA+AGG | - | chr2.4:8853711-8853730 | None:intergenic | 20.0% |
| !! | TTAATTACTAAATTCACCTT+TGG | + | chr2.4:8854126-8854145 | MS.gene31349:intron | 20.0% |
| !!! | GTATTTACTTACAATTTTCT+CGG | - | chr2.4:8852465-8852484 | None:intergenic | 20.0% |
| !!! | TATTTTAGAAAATTGTGAGT+TGG | - | chr2.4:8852514-8852533 | None:intergenic | 20.0% |
| ! | AAAACAAAAGCAAGATTCAT+TGG | + | chr2.4:8852331-8852350 | MS.gene31349:CDS | 25.0% |
| ! | AAAATACCTAAGTAATTTCG+TGG | - | chr2.4:8851144-8851163 | None:intergenic | 25.0% |
| ! | AAACAAAAGCAAGATTCATT+GGG | + | chr2.4:8852332-8852351 | MS.gene31349:CDS | 25.0% |
| ! | AAACAAATCTCAAATGCATT+TGG | + | chr2.4:8850667-8850686 | MS.gene31349:intron | 25.0% |
| ! | AAATAGAAATTTGGAGAGAA+TGG | - | chr2.4:8850736-8850755 | None:intergenic | 25.0% |
| ! | AACAAATCTCAAATGCATTT+GGG | + | chr2.4:8850668-8850687 | MS.gene31349:intron | 25.0% |
| ! | AATTGTTCACTACTAAAAAC+AGG | - | chr2.4:8852724-8852743 | None:intergenic | 25.0% |
| ! | ACAAAGTTCAAGAGTTATTT+GGG | + | chr2.4:8851742-8851761 | MS.gene31349:CDS | 25.0% |
| ! | ACACTAAATTTGAATACCAA+AGG | - | chr2.4:8854145-8854164 | None:intergenic | 25.0% |
| ! | ATGTTCAATCTCAAATGTTT+AGG | + | chr2.4:8853230-8853249 | MS.gene31349:intron | 25.0% |
| ! | ATGTTGAAAATTGTATCTGA+TGG | + | chr2.4:8854213-8854232 | MS.gene31349:CDS | 25.0% |
| ! | ATTGAATTTGATCAATCAAC+TGG | + | chr2.4:8851697-8851716 | MS.gene31349:CDS | 25.0% |
| ! | CCATTGAATAAAATTGTTGA+GGG | - | chr2.4:8853118-8853137 | None:intergenic | 25.0% |
| ! | CCGGATATAATTAATTCATA+TGG | + | chr2.4:8850998-8851017 | MS.gene31349:intron | 25.0% |
| ! | GAGACAAAAACTATCATATT+CGG | - | chr2.4:8851488-8851507 | None:intergenic | 25.0% |
| ! | GTTGATTGATCAAATTCAAT+CGG | - | chr2.4:8851697-8851716 | None:intergenic | 25.0% |
| ! | TATGGCAATATTTACAAGTT+GGG | + | chr2.4:8852973-8852992 | MS.gene31349:CDS | 25.0% |
| ! | TCAGATACTAGAAAATGATA+TGG | + | chr2.4:8853011-8853030 | MS.gene31349:CDS | 25.0% |
| ! | TGACTTCTAGATATATACAT+GGG | + | chr2.4:8852027-8852046 | MS.gene31349:CDS | 25.0% |
| ! | TGTTGAAAATTGTATCTGAT+GGG | + | chr2.4:8854214-8854233 | MS.gene31349:CDS | 25.0% |
| ! | TTAATACTATCATAGAGCTT+TGG | + | chr2.4:8853986-8854005 | MS.gene31349:intron | 25.0% |
| ! | TTCCTCATCAAGAAAATTAT+AGG | - | chr2.4:8852081-8852100 | None:intergenic | 25.0% |
| ! | TTCTAGTATCTGATTATGTA+TGG | - | chr2.4:8853004-8853023 | None:intergenic | 25.0% |
| ! | TTCTATATTACACAACAAGA+TGG | - | chr2.4:8851921-8851940 | None:intergenic | 25.0% |
| ! | TTGAATTTGATCAATCAACT+GGG | + | chr2.4:8851698-8851717 | MS.gene31349:CDS | 25.0% |
| ! | TTGACTTCTAGATATATACA+TGG | + | chr2.4:8852026-8852045 | MS.gene31349:CDS | 25.0% |
| !! | AATTTAAAACAACTTACGAC+AGG | - | chr2.4:8854065-8854084 | None:intergenic | 25.0% |
| !! | ATAATGGAAACAACACATTA+AGG | - | chr2.4:8850759-8850778 | None:intergenic | 25.0% |
| !! | ATTTAAAACAACTTACGACA+GGG | - | chr2.4:8854064-8854083 | None:intergenic | 25.0% |
| !! | TCAGAGAATGGAATTTTTAA+AGG | + | chr2.4:8849473-8849492 | MS.gene31349:CDS | 25.0% |
| !! | TTGATTCAAGTTATGGAATA+TGG | + | chr2.4:8850546-8850565 | MS.gene31349:intron | 25.0% |
| !! | TTTACTTTGTTTGCTTACAA+TGG | + | chr2.4:8851385-8851404 | MS.gene31349:intron | 25.0% |
| !!! | AAATATGTTTTAGGATTCTC+TGG | + | chr2.4:8852540-8852559 | MS.gene31349:intron | 25.0% |
| !!! | CAGTATTTTGATAGAAGATT+GGG | + | chr2.4:8851786-8851805 | MS.gene31349:CDS | 25.0% |
| !!! | GCATAACTTATTTTGTATGT+AGG | - | chr2.4:8853661-8853680 | None:intergenic | 25.0% |
| !!! | TCAGTATTTTGATAGAAGAT+TGG | + | chr2.4:8851785-8851804 | MS.gene31349:CDS | 25.0% |
| !!! | TCATATGTGGATTTTTTTGT+CGG | - | chr2.4:8851346-8851365 | None:intergenic | 25.0% |
| !!! | TGTTCAACAATTGGTTTTAA+AGG | + | chr2.4:8853314-8853333 | MS.gene31349:CDS | 25.0% |
| !!! | TTGTTGTTTAAATAGACACA+TGG | + | chr2.4:8851555-8851574 | MS.gene31349:intron | 25.0% |
| !!! | TTTTAAAGGATTCTCAGATT+CGG | + | chr2.4:8849487-8849506 | MS.gene31349:CDS | 25.0% |
| AAAATATCTTTACGTCCTTG+TGG | - | chr2.4:8852595-8852614 | None:intergenic | 30.0% | |
| AAAGAAAGCTCAAATGAGTT+CGG | + | chr2.4:8852232-8852251 | MS.gene31349:CDS | 30.0% | |
| AATCAACTGGGAAATCAATA+GGG | + | chr2.4:8851710-8851729 | MS.gene31349:CDS | 30.0% | |
| AATTAAAGAGGAATTGATGC+AGG | + | chr2.4:8852774-8852793 | MS.gene31349:CDS | 30.0% | |
| ACAATTGAAGACCATAAAAG+TGG | + | chr2.4:8852738-8852757 | MS.gene31349:CDS | 30.0% | |
| ACATTGAAGAACAAACAGTT+AGG | - | chr2.4:8853785-8853804 | None:intergenic | 30.0% | |
| ACTAGAAAATGATATGGTGA+GGG | + | chr2.4:8853017-8853036 | MS.gene31349:CDS | 30.0% | |
| ACTAGATTCTGTTCAACAAT+TGG | + | chr2.4:8853305-8853324 | MS.gene31349:CDS | 30.0% | |
| AGAATCTATAAAGCTTGAGT+TGG | + | chr2.4:8853350-8853369 | MS.gene31349:CDS | 30.0% | |
| AGATATTATGGAGTTGTGTA+TGG | + | chr2.4:8853410-8853429 | MS.gene31349:CDS | 30.0% | |
| AGTATCTGATTATGTATGGT+AGG | - | chr2.4:8853000-8853019 | None:intergenic | 30.0% | |
| ATAAGTTCAAGTAACCTGAA+AGG | - | chr2.4:8852141-8852160 | None:intergenic | 30.0% | |
| ATATATACATGGGGATCTTA+GGG | + | chr2.4:8852037-8852056 | MS.gene31349:CDS | 30.0% | |
| ATGATAGAATGAAGTCTCTT+TGG | + | chr2.4:8853376-8853395 | MS.gene31349:CDS | 30.0% | |
| ATGGCAATATTTACAAGTTG+GGG | + | chr2.4:8852974-8852993 | MS.gene31349:CDS | 30.0% | |
| ATTAAGCTGTTTATCCATAC+TGG | + | chr2.4:8850214-8850233 | MS.gene31349:intron | 30.0% | |
| CAAAGAACCTACAAGTTAAA+TGG | - | chr2.4:8850400-8850419 | None:intergenic | 30.0% | |
| CAACTTGTAAATATTGCCAT+AGG | - | chr2.4:8852974-8852993 | None:intergenic | 30.0% | |
| CTAGTAGATAAGCTCAAATA+AGG | - | chr2.4:8850039-8850058 | None:intergenic | 30.0% | |
| CTATGGCAATATTTACAAGT+TGG | + | chr2.4:8852972-8852991 | MS.gene31349:CDS | 30.0% | |
| GACAAAGTTCAAGAGTTATT+TGG | + | chr2.4:8851741-8851760 | MS.gene31349:CDS | 30.0% | |
| GACTTCTAGATATATACATG+GGG | + | chr2.4:8852028-8852047 | MS.gene31349:CDS | 30.0% | |
| GATATTATGGAGTTGTGTAT+GGG | + | chr2.4:8853411-8853430 | MS.gene31349:CDS | 30.0% | |
| GATTGAAGAATGTGTTTGAT+GGG | + | chr2.4:8851176-8851195 | MS.gene31349:intron | 30.0% | |
| GCCATTGAATAAAATTGTTG+AGG | - | chr2.4:8853119-8853138 | None:intergenic | 30.0% | |
| TACTAGAAAATGATATGGTG+AGG | + | chr2.4:8853016-8853035 | MS.gene31349:CDS | 30.0% | |
| TATATAAGATTCACAAGAGC+AGG | - | chr2.4:8850957-8850976 | None:intergenic | 30.0% | |
| TATATTACACAACAAGATGG+AGG | - | chr2.4:8851918-8851937 | None:intergenic | 30.0% | |
| TATCTGATCATGCTTCTATT+AGG | + | chr2.4:8850463-8850482 | MS.gene31349:intron | 30.0% | |
| TCAACCCAAAAGTAACAATA+AGG | - | chr2.4:8850249-8850268 | None:intergenic | 30.0% | |
| TCATGCAAATTTAAGTAGGT+AGG | - | chr2.4:8851074-8851093 | None:intergenic | 30.0% | |
| TCTACCAAAAAGAAAGTTAG+AGG | + | chr2.4:8851619-8851638 | MS.gene31349:CDS | 30.0% | |
| TGATTGAAGAATGTGTTTGA+TGG | + | chr2.4:8851175-8851194 | MS.gene31349:intron | 30.0% | |
| TTAAGCTGTTTATCCATACT+GGG | + | chr2.4:8850215-8850234 | MS.gene31349:intron | 30.0% | |
| TTGTAGTTCATCGCTTATAA+TGG | + | chr2.4:8853737-8853756 | MS.gene31349:intron | 30.0% | |
| ! | AATTTTCAAAGGATTCTCAG+AGG | + | chr2.4:8849430-8849449 | MS.gene31349:CDS | 30.0% |
| ! | ACAAGGACGTAAAGATATTT+TGG | + | chr2.4:8852594-8852613 | MS.gene31349:CDS | 30.0% |
| ! | ACAGAAGATGCAATTTTCAA+AGG | + | chr2.4:8849419-8849438 | MS.gene31349:CDS | 30.0% |
| ! | ACTTATTGTAATAAGGTGCT+AGG | - | chr2.4:8853704-8853723 | None:intergenic | 30.0% |
| ! | ATTTTCAAAGGATTCTCAGA+GGG | + | chr2.4:8849431-8849450 | MS.gene31349:CDS | 30.0% |
| ! | ATTTTCTTGATGAGGAAACA+TGG | + | chr2.4:8852084-8852103 | MS.gene31349:CDS | 30.0% |
| ! | CCCTCAACAATTTTATTCAA+TGG | + | chr2.4:8853115-8853134 | MS.gene31349:CDS | 30.0% |
| ! | TCAAATGTTTAGGATGTTGA+TGG | + | chr2.4:8853240-8853259 | MS.gene31349:intron | 30.0% |
| ! | TCAGAGAATGCAATTTTCAA+AGG | + | chr2.4:8849623-8849642 | MS.gene31349:CDS | 30.0% |
| !! | AAAGAAATGGATTGCATATG+TGG | + | chr2.4:8851974-8851993 | MS.gene31349:CDS | 30.0% |
| !! | AAGAAATGGATTGCATATGT+GGG | + | chr2.4:8851975-8851994 | MS.gene31349:CDS | 30.0% |
| !! | AAGAGTGTTGATTCAAGTTA+TGG | + | chr2.4:8850539-8850558 | MS.gene31349:intron | 30.0% |
| !! | GATTATTGATTCATGGAAGA+AGG | + | chr2.4:8854236-8854255 | MS.gene31349:CDS | 30.0% |
| !! | TACGGTTCAATTTTCTAAGA+TGG | - | chr2.4:8851276-8851295 | None:intergenic | 30.0% |
| !! | TTTTATGCACTGTCTTGTTA+GGG | + | chr2.4:8850000-8850019 | MS.gene31349:intron | 30.0% |
| !!! | CTCTTTTTTCTTTCAGTCAT+TGG | - | chr2.4:8850846-8850865 | None:intergenic | 30.0% |
| AAGACAATGTTTCACCCAAA+AGG | + | chr2.4:8853271-8853290 | MS.gene31349:CDS | 35.0% | |
| AAGAGATTCTCAGACTCAAA+GGG | + | chr2.4:8849581-8849600 | MS.gene31349:CDS | 35.0% | |
| AATCGCCTCTCAATTAATGT+GGG | + | chr2.4:8853564-8853583 | MS.gene31349:CDS | 35.0% | |
| AATTCGCGTGTATGCATAAT+AGG | + | chr2.4:8852202-8852221 | MS.gene31349:intron | 35.0% | |
| ACAAGTTAAATGGTCATCAC+AGG | - | chr2.4:8850390-8850409 | None:intergenic | 35.0% | |
| ACATACAATTCACATCGTTC+TGG | - | chr2.4:8852928-8852947 | None:intergenic | 35.0% | |
| ACCTAAACTGATGACAAACA+GGG | + | chr2.4:8850609-8850628 | MS.gene31349:intron | 35.0% | |
| ATAAGTTCATCCTCATCGAA+TGG | - | chr2.4:8854366-8854385 | None:intergenic | 35.0% | |
| ATATGGGATGTTCCTAATTC+TGG | + | chr2.4:8851942-8851961 | MS.gene31349:CDS | 35.0% | |
| ATCAACTGGGAAATCAATAG+GGG | + | chr2.4:8851711-8851730 | MS.gene31349:CDS | 35.0% | |
| CAATCAACTGGGAAATCAAT+AGG | + | chr2.4:8851709-8851728 | MS.gene31349:CDS | 35.0% | |
| CACTCGTGATGATCATAAAA+AGG | + | chr2.4:8851224-8851243 | MS.gene31349:intron | 35.0% | |
| CATACAAATTTGTGCTTCTC+AGG | + | chr2.4:8849903-8849922 | MS.gene31349:intron | 35.0% | |
| CATACAATTCACATCGTTCT+GGG | - | chr2.4:8852927-8852946 | None:intergenic | 35.0% | |
| CCACAATCGTAGAATAGTTA+TGG | - | chr2.4:8853451-8853470 | None:intergenic | 35.0% | |
| CCATAACTATTCTACGATTG+TGG | + | chr2.4:8853448-8853467 | MS.gene31349:CDS | 35.0% | |
| CGAATGTGAAGGATGAAATT+TGG | + | chr2.4:8851821-8851840 | MS.gene31349:CDS | 35.0% | |
| CGCTTCATGCAAATTTAAGT+AGG | - | chr2.4:8851078-8851097 | None:intergenic | 35.0% | |
| GATATATACATGGGGATCTT+AGG | + | chr2.4:8852036-8852055 | MS.gene31349:CDS | 35.0% | |
| GCATACACGCGAATTAAATT+TGG | - | chr2.4:8852197-8852216 | None:intergenic | 35.0% | |
| GCTTACTCAGCAAATTAAAG+AGG | + | chr2.4:8852762-8852781 | MS.gene31349:CDS | 35.0% | |
| GTGGGTATTAAGCAATACTT+TGG | + | chr2.4:8852673-8852692 | MS.gene31349:CDS | 35.0% | |
| GTTCACTACTAAAAACAGGT+GGG | - | chr2.4:8852720-8852739 | None:intergenic | 35.0% | |
| GTTGAACAGAATCTAGTTGA+GGG | - | chr2.4:8853302-8853321 | None:intergenic | 35.0% | |
| TACCTAAACTGATGACAAAC+AGG | + | chr2.4:8850608-8850627 | MS.gene31349:intron | 35.0% | |
| TAGGTAGGTTGTAGATAACT+CGG | - | chr2.4:8851059-8851078 | None:intergenic | 35.0% | |
| TAGTGAAGTACATGAAAGAG+TGG | + | chr2.4:8849344-8849363 | MS.gene31349:CDS | 35.0% | |
| TATATACATGGGGATCTTAG+GGG | + | chr2.4:8852038-8852057 | MS.gene31349:CDS | 35.0% | |
| TCAGTAGCTCTTCTAAATGA+TGG | - | chr2.4:8851522-8851541 | None:intergenic | 35.0% | |
| TCATCACAGGTAATGTTATG+TGG | - | chr2.4:8850377-8850396 | None:intergenic | 35.0% | |
| TCTCTTGCATTATCTTCTCT+TGG | - | chr2.4:8852307-8852326 | None:intergenic | 35.0% | |
| TCTTACCCACATTAATTGAG+AGG | - | chr2.4:8853572-8853591 | None:intergenic | 35.0% | |
| TGGCATATTGAAATAACCAC+AGG | - | chr2.4:8851206-8851225 | None:intergenic | 35.0% | |
| TGTTCACTACTAAAAACAGG+TGG | - | chr2.4:8852721-8852740 | None:intergenic | 35.0% | |
| TGTTGAACAGAATCTAGTTG+AGG | - | chr2.4:8853303-8853322 | None:intergenic | 35.0% | |
| TTAAACTTGCACAACGTTGT+CGG | - | chr2.4:8854395-8854414 | None:intergenic | 35.0% | |
| TTATATCCGGCAGAATAAAG+AGG | - | chr2.4:8850988-8851007 | None:intergenic | 35.0% | |
| TTCAAAAGAAGAAGCCAACA+TGG | + | chr2.4:8854033-8854052 | MS.gene31349:CDS | 35.0% | |
| TTCACTACTAAAAACAGGTG+GGG | - | chr2.4:8852719-8852738 | None:intergenic | 35.0% | |
| TTCATTCCTCTTTATTCTGC+CGG | + | chr2.4:8850979-8850998 | MS.gene31349:intron | 35.0% | |
| TTCTTCAATGTAGTCGTCAT+TGG | + | chr2.4:8853794-8853813 | MS.gene31349:intron | 35.0% | |
| TTTCGTAAGAAGCCAGAATT+AGG | - | chr2.4:8851957-8851976 | None:intergenic | 35.0% | |
| TTTCTTTCAGTCATTGGTGT+CGG | - | chr2.4:8850840-8850859 | None:intergenic | 35.0% | |
| ! | AAGAGTTATTTGGGTTTCCT+TGG | + | chr2.4:8851751-8851770 | MS.gene31349:CDS | 35.0% |
| ! | ACAATCTCCACAAGTCTTTT+TGG | - | chr2.4:8853141-8853160 | None:intergenic | 35.0% |
| ! | AGAGTGTGTGATTCAAGTTA+TGG | + | chr2.4:8850510-8850529 | MS.gene31349:intron | 35.0% |
| ! | CTGAGAAGCACAAATTTGTA+TGG | - | chr2.4:8849905-8849924 | None:intergenic | 35.0% |
| ! | CTTTTTATGATCATCACGAG+TGG | - | chr2.4:8851226-8851245 | None:intergenic | 35.0% |
| ! | GGCCTATAATTTTCTTGATG+AGG | + | chr2.4:8852076-8852095 | MS.gene31349:CDS | 35.0% |
| ! | TCAGAGGATGCAATTTTCAA+AGG | + | chr2.4:8849563-8849582 | MS.gene31349:CDS | 35.0% |
| ! | TGATGATTTTCTTCATGCAG+TGG | + | chr2.4:8852948-8852967 | MS.gene31349:CDS | 35.0% |
| !! | ACTTTCTTTTTGGTAGACTG+AGG | - | chr2.4:8851616-8851635 | None:intergenic | 35.0% |
| !! | CTGATGGGATTATTGATTCA+TGG | + | chr2.4:8854229-8854248 | MS.gene31349:CDS | 35.0% |
| !! | GTGATGACCATTTAACTTGT+AGG | + | chr2.4:8850390-8850409 | MS.gene31349:intron | 35.0% |
| !! | GTTTTATGCACTGTCTTGTT+AGG | + | chr2.4:8849999-8850018 | MS.gene31349:intron | 35.0% |
| !! | TACTATCATAGAGCTTTGGA+TGG | + | chr2.4:8853990-8854009 | MS.gene31349:intron | 35.0% |
| !! | TGTGGAGATTGTTTCTGATA+AGG | + | chr2.4:8853149-8853168 | MS.gene31349:CDS | 35.0% |
| !! | TTGGGTTGATGTAGAATTGT+AGG | + | chr2.4:8850260-8850279 | MS.gene31349:intron | 35.0% |
| !!! | TGGGCCTTATTGTTACTTTT+GGG | + | chr2.4:8850242-8850261 | MS.gene31349:intron | 35.0% |
| AAAGTAACAATAAGGCCCAC+TGG | - | chr2.4:8850241-8850260 | None:intergenic | 40.0% | |
| ACATGATCCAAGTAATGCTG+AGG | + | chr2.4:8853635-8853654 | MS.gene31349:CDS | 40.0% | |
| AGAAAATGATATGGTGAGGG+TGG | + | chr2.4:8853020-8853039 | MS.gene31349:CDS | 40.0% | |
| AGAAAATTATAGGCCTCGAG+AGG | - | chr2.4:8852071-8852090 | None:intergenic | 40.0% | |
| ATATGATGATTTCGGGCCTA+AGG | + | chr2.4:8851115-8851134 | MS.gene31349:intron | 40.0% | |
| ATCAGGAGATTACACATCAG+AGG | + | chr2.4:8852424-8852443 | MS.gene31349:CDS | 40.0% | |
| ATCCTTCACATTCGCATCTA+CGG | - | chr2.4:8851815-8851834 | None:intergenic | 40.0% | |
| ATTTCATCCTCCTCTGGTAT+AGG | - | chr2.4:8852904-8852923 | None:intergenic | 40.0% | |
| CAAGAGATTCTCAGACTCAA+AGG | + | chr2.4:8849580-8849599 | MS.gene31349:CDS | 40.0% | |
| CAGAGGATACAATCTTCAGA+GGG | + | chr2.4:8849537-8849556 | MS.gene31349:CDS | 40.0% | |
| CAGTAGTTCTTGCTTGATGT+GGG | + | chr2.4:8850307-8850326 | MS.gene31349:intron | 40.0% | |
| CCTAAACTGATGACAAACAG+GGG | + | chr2.4:8850610-8850629 | MS.gene31349:intron | 40.0% | |
| CTAAACTGATGACAAACAGG+GGG | + | chr2.4:8850611-8850630 | MS.gene31349:intron | 40.0% | |
| CTGGCTTCTTACGAAAGAAA+TGG | + | chr2.4:8851961-8851980 | MS.gene31349:CDS | 40.0% | |
| GAATCGCCTCTCAATTAATG+TGG | + | chr2.4:8853563-8853582 | MS.gene31349:CDS | 40.0% | |
| GATGGATATCATAAGCTGCA+AGG | + | chr2.4:8854008-8854027 | MS.gene31349:CDS | 40.0% | |
| GCAAGATTCATTGGGTGATT+CGG | + | chr2.4:8852340-8852359 | MS.gene31349:CDS | 40.0% | |
| GCTAACTTCTTCATCAGTGT+GGG | - | chr2.4:8851646-8851665 | None:intergenic | 40.0% | |
| GCTCTCACAGAGAGATATTA+TGG | + | chr2.4:8853398-8853417 | MS.gene31349:CDS | 40.0% | |
| GTATCCTTTGTCCATCAGTA+CGG | - | chr2.4:8851675-8851694 | None:intergenic | 40.0% | |
| GTGGGTAAGAGTGACTTATA+TGG | + | chr2.4:8853582-8853601 | MS.gene31349:CDS | 40.0% | |
| TAAAGGATTCTCAGATTCGG+TGG | + | chr2.4:8849490-8849509 | MS.gene31349:CDS | 40.0% | |
| TACAACGGTATTAGGAGAGT+GGG | - | chr2.4:8852845-8852864 | None:intergenic | 40.0% | |
| TCAATGGCCAAAAAGACTTG+TGG | + | chr2.4:8853131-8853150 | MS.gene31349:CDS | 40.0% | |
| TCAGAGGATACAATCTTCAG+AGG | + | chr2.4:8849536-8849555 | MS.gene31349:CDS | 40.0% | |
| TCAGTAGTTCTTGCTTGATG+TGG | + | chr2.4:8850306-8850325 | MS.gene31349:intron | 40.0% | |
| TCTGATGTGTAATCTCCTGA+TGG | - | chr2.4:8852425-8852444 | None:intergenic | 40.0% | |
| TGAAATTTGGACAGAGATCC+TGG | + | chr2.4:8851834-8851853 | MS.gene31349:CDS | 40.0% | |
| TGCAATTTCCAGAGGATTCT+CGG | + | chr2.4:8849664-8849683 | MS.gene31349:CDS | 40.0% | |
| TGCTAACTTCTTCATCAGTG+TGG | - | chr2.4:8851647-8851666 | None:intergenic | 40.0% | |
| TGTAGATAACTCGGAGAACA+AGG | - | chr2.4:8851050-8851069 | None:intergenic | 40.0% | |
| TGTAGTATTCCTATGTTCGC+TGG | + | chr2.4:8853849-8853868 | MS.gene31349:CDS | 40.0% | |
| TTCAAGTAACCTGAAAGGCA+GGG | - | chr2.4:8852136-8852155 | None:intergenic | 40.0% | |
| TTCAGAAGGTTCTCAGAGAA+TGG | + | chr2.4:8849461-8849480 | MS.gene31349:CDS | 40.0% | |
| ! | AATCTCCTGATGGCTTTTGT+CGG | - | chr2.4:8852415-8852434 | None:intergenic | 40.0% |
| ! | AGTTGAGGGTTTGACCTTTT+GGG | - | chr2.4:8853288-8853307 | None:intergenic | 40.0% |
| ! | CAAGGAACTTTTGTTCCACA+AGG | + | chr2.4:8852577-8852596 | MS.gene31349:CDS | 40.0% |
| ! | GGGACCTCTAACTTTCTTTT+TGG | - | chr2.4:8851626-8851645 | None:intergenic | 40.0% |
| ! | TAGTTGAGGGTTTGACCTTT+TGG | - | chr2.4:8853289-8853308 | None:intergenic | 40.0% |
| ! | TCGGAGGATGCAATTTTCAA+AGG | + | chr2.4:8849716-8849735 | MS.gene31349:CDS | 40.0% |
| !! | CTGAGTAAGCTCCACTTTTA+TGG | - | chr2.4:8852752-8852771 | None:intergenic | 40.0% |
| !! | GAAGACTCACTTTGAGTTGT+TGG | - | chr2.4:8849856-8849875 | None:intergenic | 40.0% |
| !! | TCGGTGGATGCAATTTTTAG+AGG | + | chr2.4:8849506-8849525 | MS.gene31349:CDS | 40.0% |
| !!! | GATATTTTGGCAGAAGCCAT+TGG | + | chr2.4:8852607-8852626 | MS.gene31349:CDS | 40.0% |
| !!! | GTGGGCCTTATTGTTACTTT+TGG | + | chr2.4:8850241-8850260 | MS.gene31349:intron | 40.0% |
| !!! | TACTGATTTTGCTTCGACCA+AGG | - | chr2.4:8851771-8851790 | None:intergenic | 40.0% |
| AAATCCTGAGCCATTCGATG+AGG | + | chr2.4:8854353-8854372 | MS.gene31349:CDS | 45.0% | |
| AAATTGCATCCTGGGAGTCT+GGG | - | chr2.4:8849772-8849791 | None:intergenic | 45.0% | |
| AATCTTCAGAGGGTTCTCAG+AGG | + | chr2.4:8849547-8849566 | MS.gene31349:CDS | 45.0% | |
| AATTTCCAGAGGATTCTCGG+AGG | + | chr2.4:8849667-8849686 | MS.gene31349:CDS | 45.0% | |
| AATTTCCGGAGGATTCTCAG+AGG | + | chr2.4:8849787-8849806 | MS.gene31349:CDS | 45.0% | |
| ACTACTAAAAACAGGTGGGG+TGG | - | chr2.4:8852716-8852735 | None:intergenic | 45.0% | |
| ACTGAGGATCTAACCTGCTT+CGG | - | chr2.4:8851600-8851619 | None:intergenic | 45.0% | |
| AGAGGAATTGATGCAGGATC+TGG | + | chr2.4:8852780-8852799 | MS.gene31349:CDS | 45.0% | |
| AGGCAGCCACGAAATTACTT+AGG | + | chr2.4:8851135-8851154 | MS.gene31349:intron | 45.0% | |
| AGTAATTTCGTGGCTGCCTT+AGG | - | chr2.4:8851134-8851153 | None:intergenic | 45.0% | |
| ATGCAGGATCTGGAAGCTAT+GGG | + | chr2.4:8852790-8852809 | MS.gene31349:CDS | 45.0% | |
| ATGTAGGCCTCAGCATTACT+TGG | - | chr2.4:8853645-8853664 | None:intergenic | 45.0% | |
| CAAAGGATTCTCAGACTCAG+AGG | + | chr2.4:8849640-8849659 | MS.gene31349:CDS | 45.0% | |
| CAACCTGAGAGTTATGAGTG+CGG | + | chr2.4:8854171-8854190 | MS.gene31349:CDS | 45.0% | |
| CAAGATGGAGGAGTTAGTGA+AGG | - | chr2.4:8851906-8851925 | None:intergenic | 45.0% | |
| CCCCTGTTTGTCATCAGTTT+AGG | - | chr2.4:8850613-8850632 | None:intergenic | 45.0% | |
| GCAGCGGAAAAATGTGGATT+TGG | + | chr2.4:8849377-8849396 | MS.gene31349:CDS | 45.0% | |
| GCTTTCTTTCCAGCGAACAT+AGG | - | chr2.4:8853861-8853880 | None:intergenic | 45.0% | |
| GTACAACGGTATTAGGAGAG+TGG | - | chr2.4:8852846-8852865 | None:intergenic | 45.0% | |
| GTTCAAGTAACCTGAAAGGC+AGG | - | chr2.4:8852137-8852156 | None:intergenic | 45.0% | |
| TCAGAGGATGCAATTTCCAG+AGG | + | chr2.4:8849656-8849675 | MS.gene31349:CDS | 45.0% | |
| TTAGCACTTGACCGTACTGA+TGG | + | chr2.4:8851661-8851680 | MS.gene31349:CDS | 45.0% | |
| TTCCGTAGATGCGAATGTGA+AGG | + | chr2.4:8851810-8851829 | MS.gene31349:CDS | 45.0% | |
| TTGGAGAGAATGGAAGAAGC+AGG | - | chr2.4:8850726-8850745 | None:intergenic | 45.0% | |
| TTGTGACTCGTGAGACTGTT+TGG | + | chr2.4:8850068-8850087 | MS.gene31349:intron | 45.0% | |
| TTTATCCATACTGGGCCAGT+GGG | + | chr2.4:8850223-8850242 | MS.gene31349:intron | 45.0% | |
| TTTCTTCATGCAGTGGCCTA+TGG | + | chr2.4:8852955-8852974 | MS.gene31349:CDS | 45.0% | |
| ! | ATCTCCTGATGGCTTTTGTC+GGG | - | chr2.4:8852414-8852433 | None:intergenic | 45.0% |
| ! | TCAAAGGGTGCAATATCCAG+AGG | + | chr2.4:8849596-8849615 | MS.gene31349:CDS | 45.0% |
| ! | TGCATTCTCTGAGAATCCTC+TGG | - | chr2.4:8849615-8849634 | None:intergenic | 45.0% |
| ! | TTGACCGTACTGATGGACAA+AGG | + | chr2.4:8851668-8851687 | MS.gene31349:CDS | 45.0% |
| !! | CAGAGGGTGCAATTTTCAGA+AGG | + | chr2.4:8849447-8849466 | MS.gene31349:CDS | 45.0% |
| !! | TTTTAGAGGAGCAGACTCAG+AGG | + | chr2.4:8849520-8849539 | MS.gene31349:CDS | 45.0% |
| !!! | TCTGGTTTTGTTCGTGGTGT+TGG | + | chr2.4:8852643-8852662 | MS.gene31349:CDS | 45.0% |
| !!! | ATATTTTTTAAATATGTTTT+AGG | + | chr2.4:8852531-8852550 | MS.gene31349:intron | 5.0% |
| AACCGTTTCCACCTCATCAG+TGG | - | chr2.4:8853088-8853107 | None:intergenic | 50.0% | |
| ACCGTTTCCACCTCATCAGT+GGG | - | chr2.4:8853087-8853106 | None:intergenic | 50.0% | |
| ACGACAGGGACAATCCATGT+TGG | - | chr2.4:8854050-8854069 | None:intergenic | 50.0% | |
| ACGGTATTAGGAGAGTGGGT+TGG | - | chr2.4:8852841-8852860 | None:intergenic | 50.0% | |
| ACTGATGACAAACAGGGGGT+CGG | + | chr2.4:8850615-8850634 | MS.gene31349:intron | 50.0% | |
| ACTGATGAGGTGGAAACGGT+TGG | + | chr2.4:8853087-8853106 | MS.gene31349:CDS | 50.0% | |
| AGCGTTTGTTCAGATGCGAC+TGG | + | chr2.4:8852109-8852128 | MS.gene31349:CDS | 50.0% | |
| ATCCTCCGGAAATTGCATCC+TGG | - | chr2.4:8849781-8849800 | None:intergenic | 50.0% | |
| ATTGGCAAACCTGAGCACTC+TGG | + | chr2.4:8852625-8852644 | MS.gene31349:CDS | 50.0% | |
| CTCGCAGGTACAACGGTATT+AGG | - | chr2.4:8852853-8852872 | None:intergenic | 50.0% | |
| CTGAGGATCTAACCTGCTTC+GGG | - | chr2.4:8851599-8851618 | None:intergenic | 50.0% | |
| CTGATGAGGTGGAAACGGTT+GGG | + | chr2.4:8853088-8853107 | MS.gene31349:CDS | 50.0% | |
| CTGGTCGAGAAAACAGCTCA+AGG | + | chr2.4:8852559-8852578 | MS.gene31349:CDS | 50.0% | |
| CTTTGTGCTCGCAGGTACAA+CGG | - | chr2.4:8852860-8852879 | None:intergenic | 50.0% | |
| GAAATTGCATCCTGGGAGTC+TGG | - | chr2.4:8849773-8849792 | None:intergenic | 50.0% | |
| GACTCCCAGGATGCAATTTC+CGG | + | chr2.4:8849773-8849792 | MS.gene31349:CDS | 50.0% | |
| GATGCAGGATCTGGAAGCTA+TGG | + | chr2.4:8852789-8852808 | MS.gene31349:CDS | 50.0% | |
| GTCGAAGCAGCGGAAAAATG+TGG | + | chr2.4:8849371-8849390 | MS.gene31349:CDS | 50.0% | |
| GTTGTACCTGCGAGCACAAA+GGG | + | chr2.4:8852859-8852878 | MS.gene31349:CDS | 50.0% | |
| GTTTATCCATACTGGGCCAG+TGG | + | chr2.4:8850222-8850241 | MS.gene31349:intron | 50.0% | |
| TAGCCGCACTCATAACTCTC+AGG | - | chr2.4:8854177-8854196 | None:intergenic | 50.0% | |
| TCATCCTCATCGAATGGCTC+AGG | - | chr2.4:8854360-8854379 | None:intergenic | 50.0% | |
| TCATCCTCCTCTGGTATAGG+AGG | - | chr2.4:8852901-8852920 | None:intergenic | 50.0% | |
| TCCTCCGGAAATTGCATCCT+GGG | - | chr2.4:8849780-8849799 | None:intergenic | 50.0% | |
| ! | AGAGTGCTCAGGTTTGCCAA+TGG | - | chr2.4:8852626-8852645 | None:intergenic | 50.0% |
| ! | CGAACAAAACCAGAGTGCTC+AGG | - | chr2.4:8852637-8852656 | None:intergenic | 50.0% |
| ! | CGGTATTAGGAGAGTGGGTT+GGG | - | chr2.4:8852840-8852859 | None:intergenic | 50.0% |
| ! | CTCTGGTATAGGAGGCACAA+CGG | - | chr2.4:8852893-8852912 | None:intergenic | 50.0% |
| ! | GTGTTTGATGGGTATGCCTG+TGG | + | chr2.4:8851187-8851206 | MS.gene31349:intron | 50.0% |
| ! | TCTGGGATTTCATCCTCCTC+TGG | - | chr2.4:8852910-8852929 | None:intergenic | 50.0% |
| ! | TGCATCCTCTGAGAATCCTC+CGG | - | chr2.4:8849795-8849814 | None:intergenic | 50.0% |
| !! | AGAGTGGGTTGGGAAATTCG+AGG | - | chr2.4:8852830-8852849 | None:intergenic | 50.0% |
| !! | GAGTGGGTTGGGAAATTCGA+GGG | - | chr2.4:8852829-8852848 | None:intergenic | 50.0% |
| !! | TTGGTGTCGGAGTACAGAGT+TGG | - | chr2.4:8850827-8850846 | None:intergenic | 50.0% |
| !! | TTTGTTCGTGGTGTTGGTCG+AGG | + | chr2.4:8852649-8852668 | MS.gene31349:CDS | 50.0% |
| !!! | GAGCACTCTGGTTTTGTTCG+TGG | + | chr2.4:8852637-8852656 | MS.gene31349:CDS | 50.0% |
| ACCCCTCACAGATTGTCTCG+TGG | + | chr2.4:8852266-8852285 | MS.gene31349:CDS | 55.0% | |
| AGAGCCCGACAAAAGCCATC+AGG | + | chr2.4:8852407-8852426 | MS.gene31349:CDS | 55.0% | |
| AGTGCCTATGCCCACTGATG+AGG | + | chr2.4:8853074-8853093 | MS.gene31349:CDS | 55.0% | |
| CAAAGGATTCCCAGACTCCC+AGG | + | chr2.4:8849760-8849779 | MS.gene31349:CDS | 55.0% | |
| CAGAGGATTCTCGGACTCAG+AGG | + | chr2.4:8849673-8849692 | MS.gene31349:CDS | 55.0% | |
| CCCACGAGACAATCTGTGAG+GGG | - | chr2.4:8852270-8852289 | None:intergenic | 55.0% | |
| CCCCACGAGACAATCTGTGA+GGG | - | chr2.4:8852271-8852290 | None:intergenic | 55.0% | |
| CCCCTCACAGATTGTCTCGT+GGG | + | chr2.4:8852267-8852286 | MS.gene31349:CDS | 55.0% | |
| CCCTCACAGATTGTCTCGTG+GGG | + | chr2.4:8852268-8852287 | MS.gene31349:CDS | 55.0% | |
| CCTCACAGATTGTCTCGTGG+GGG | + | chr2.4:8852269-8852288 | MS.gene31349:CDS | 55.0% | |
| CGTTGTACCTGCGAGCACAA+AGG | + | chr2.4:8852858-8852877 | MS.gene31349:CDS | 55.0% | |
| CGTTGTGCCTCCTATACCAG+AGG | + | chr2.4:8852891-8852910 | MS.gene31349:CDS | 55.0% | |
| CTCTGAGTCCGAGAATCCTC+TGG | - | chr2.4:8849675-8849694 | None:intergenic | 55.0% | |
| GAACTACCCTTTGTGCTCGC+AGG | - | chr2.4:8852868-8852887 | None:intergenic | 55.0% | |
| GAGTGGAATCGTCGAAGCAG+CGG | + | chr2.4:8849361-8849380 | MS.gene31349:CDS | 55.0% | |
| GCCCACTGATGAGGTGGAAA+CGG | + | chr2.4:8853083-8853102 | MS.gene31349:CDS | 55.0% | |
| GGATCTAACCTGCTTCGGGA+AGG | - | chr2.4:8851595-8851614 | None:intergenic | 55.0% | |
| GGGCTCTCTTCCATTGCTCA+TGG | - | chr2.4:8852394-8852413 | None:intergenic | 55.0% | |
| GGGGTGGAATCACGTGAAAG+TGG | - | chr2.4:8852700-8852719 | None:intergenic | 55.0% | |
| TATCAGCTCCTTCCCGAAGC+AGG | + | chr2.4:8851584-8851603 | MS.gene31349:CDS | 55.0% | |
| TCCACCTCATCAGTGGGCAT+AGG | - | chr2.4:8853081-8853100 | None:intergenic | 55.0% | |
| TCCCAGGATGCAATTTCCGG+AGG | + | chr2.4:8849776-8849795 | MS.gene31349:CDS | 55.0% | |
| TGCATCCTCCGAGAATCCTC+TGG | - | chr2.4:8849708-8849727 | None:intergenic | 55.0% | |
| TGTGCCTCCTATACCAGAGG+AGG | + | chr2.4:8852894-8852913 | MS.gene31349:CDS | 55.0% | |
| TTCCATTGCTCATGGCGTGC+TGG | - | chr2.4:8852386-8852405 | None:intergenic | 55.0% | |
| TTGCATATGTGGGCGAGCGT+TGG | + | chr2.4:8851985-8852004 | MS.gene31349:CDS | 55.0% | |
| !! | ATATGTGGGCGAGCGTTGGA+GGG | + | chr2.4:8851989-8852008 | MS.gene31349:CDS | 55.0% |
| CACCAGCACGCCATGAGCAA+TGG | + | chr2.4:8852381-8852400 | MS.gene31349:CDS | 60.0% | |
| CATTGCTCATGGCGTGCTGG+TGG | - | chr2.4:8852383-8852402 | None:intergenic | 60.0% | |
| CCCCCACGAGACAATCTGTG+AGG | - | chr2.4:8852272-8852291 | None:intergenic | 60.0% | |
| GCCTATGCCCACTGATGAGG+TGG | + | chr2.4:8853077-8853096 | MS.gene31349:CDS | 60.0% | |
| GGTGAGGGTGGTTGTTAGCG+AGG | + | chr2.4:8853032-8853051 | MS.gene31349:CDS | 60.0% | |
| TAAGGCCCACTGGCCCAGTA+TGG | - | chr2.4:8850231-8850250 | None:intergenic | 60.0% | |
| TAGGGGACAATCGCCTCTCG+AGG | + | chr2.4:8852055-8852074 | MS.gene31349:CDS | 60.0% | |
| TGAGGTGGAAACGGTTGGGC+AGG | + | chr2.4:8853092-8853111 | MS.gene31349:CDS | 60.0% | |
| ! | TCATGGCGTGCTGGTGGAGA+TGG | - | chr2.4:8852377-8852396 | None:intergenic | 60.0% |
| !! | CATATGTGGGCGAGCGTTGG+AGG | + | chr2.4:8851988-8852007 | MS.gene31349:CDS | 60.0% |
| !! | CGTGGTGTTGGTCGAGGTGT+GGG | + | chr2.4:8852655-8852674 | MS.gene31349:CDS | 60.0% |
| !! | TCGTGGTGTTGGTCGAGGTG+TGG | + | chr2.4:8852654-8852673 | MS.gene31349:CDS | 60.0% |
| GCGACTGGACCCTGCCTTTC+AGG | + | chr2.4:8852124-8852143 | MS.gene31349:CDS | 65.0% | |
| ! | TGGCGTGCTGGTGGAGATGG+AGG | - | chr2.4:8852374-8852393 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 8849333 | 8854449 | 8849333 | ID=MS.gene31349 |
| chr2.4 | mRNA | 8849333 | 8854449 | 8849333 | ID=MS.gene31349.t1;Parent=MS.gene31349 |
| chr2.4 | exon | 8849333 | 8849865 | 8849333 | ID=MS.gene31349.t1.exon1;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8849333 | 8849865 | 8849333 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8851570 | 8851855 | 8851570 | ID=MS.gene31349.t1.exon2;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8851570 | 8851855 | 8851570 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8851939 | 8852145 | 8851939 | ID=MS.gene31349.t1.exon3;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8851939 | 8852145 | 8851939 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8852224 | 8852472 | 8852224 | ID=MS.gene31349.t1.exon4;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8852224 | 8852472 | 8852224 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8852553 | 8853170 | 8852553 | ID=MS.gene31349.t1.exon5;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8852553 | 8853170 | 8852553 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8853252 | 8853475 | 8853252 | ID=MS.gene31349.t1.exon6;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8853252 | 8853475 | 8853252 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8853557 | 8853721 | 8853557 | ID=MS.gene31349.t1.exon7;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8853557 | 8853721 | 8853557 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8853807 | 8853911 | 8853807 | ID=MS.gene31349.t1.exon8;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8853807 | 8853911 | 8853807 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8854001 | 8854067 | 8854001 | ID=MS.gene31349.t1.exon9;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8854001 | 8854067 | 8854001 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8854162 | 8854257 | 8854162 | ID=MS.gene31349.t1.exon10;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8854162 | 8854257 | 8854162 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| chr2.4 | exon | 8854345 | 8854449 | 8854345 | ID=MS.gene31349.t1.exon11;Parent=MS.gene31349.t1 |
| chr2.4 | CDS | 8854345 | 8854449 | 8854345 | ID=cds.MS.gene31349.t1;Parent=MS.gene31349.t1 |
| Gene Sequence |
| Protein sequence |
