Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32740.t1 | XP_024635939.1 | 93.5 | 675 | 43 | 1 | 1 | 675 | 1 | 674 | 0.00E+00 | 1266.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32740.t1 | Q38961 | 41.4 | 365 | 198 | 8 | 316 | 671 | 119 | 476 | 5.8e-73 | 276.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32740.t1 | A0A396IZH0 | 93.5 | 675 | 43 | 1 | 1 | 675 | 1 | 674 | 0.0e+00 | 1266.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene32740 | 0.806286 | 8.85E-50 | -1.69E-46 |
| MS.gene049596 | MS.gene32740 | 0.83367 | 4.67E-56 | -1.69E-46 |
| MS.gene049989 | MS.gene32740 | 0.825439 | 4.69E-54 | -1.69E-46 |
| MS.gene050875 | MS.gene32740 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene05124 | MS.gene32740 | 0.861754 | 8.21E-64 | -1.69E-46 |
| MS.gene051896 | MS.gene32740 | 0.811723 | 6.07E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene32740 | 0.829058 | 6.37E-55 | -1.69E-46 |
| MS.gene052308 | MS.gene32740 | 0.829952 | 3.86E-55 | -1.69E-46 |
| MS.gene052367 | MS.gene32740 | 0.856984 | 2.22E-62 | -1.69E-46 |
| MS.gene053173 | MS.gene32740 | 0.860609 | 1.83E-63 | -1.69E-46 |
| MS.gene053348 | MS.gene32740 | 0.824131 | 9.53E-54 | -1.69E-46 |
| MS.gene053416 | MS.gene32740 | 0.859955 | 2.89E-63 | -1.69E-46 |
| MS.gene053417 | MS.gene32740 | 0.857759 | 1.31E-62 | -1.69E-46 |
| MS.gene054459 | MS.gene32740 | 0.837409 | 5.29E-57 | -1.69E-46 |
| MS.gene054551 | MS.gene32740 | 0.850754 | 1.38E-60 | -1.69E-46 |
| MS.gene054593 | MS.gene32740 | 0.832051 | 1.18E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene32740 | 0.833434 | 5.35E-56 | -1.69E-46 |
| MS.gene054662 | MS.gene32740 | 0.835381 | 1.73E-56 | -1.69E-46 |
| MS.gene054885 | MS.gene32740 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene055308 | MS.gene32740 | 0.83143 | 1.68E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene32740 | 0.823622 | 1.25E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene32740 | 0.8463 | 2.37E-59 | -1.69E-46 |
| MS.gene05640 | MS.gene32740 | 0.897119 | 1.92E-76 | -1.69E-46 |
| MS.gene056526 | MS.gene32740 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene057367 | MS.gene32740 | 0.823543 | 1.31E-53 | -1.69E-46 |
| MS.gene057458 | MS.gene32740 | 0.828786 | 7.41E-55 | -1.69E-46 |
| MS.gene058128 | MS.gene32740 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene058818 | MS.gene32740 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene058844 | MS.gene32740 | 0.808028 | 3.79E-50 | -1.69E-46 |
| MS.gene058853 | MS.gene32740 | 0.825633 | 4.21E-54 | -1.69E-46 |
| MS.gene059553 | MS.gene32740 | 0.861061 | 1.34E-63 | -1.69E-46 |
| MS.gene059616 | MS.gene32740 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene060473 | MS.gene32740 | 0.830927 | 2.23E-55 | -1.69E-46 |
| MS.gene060565 | MS.gene32740 | 0.832932 | 7.13E-56 | -1.69E-46 |
| MS.gene06093 | MS.gene32740 | 0.895909 | 6.12E-76 | -1.69E-46 |
| MS.gene061099 | MS.gene32740 | 0.827589 | 1.44E-54 | -1.69E-46 |
| MS.gene061260 | MS.gene32740 | 0.859977 | 2.85E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32740.t1 | MTR_3g105470 | 95.407 | 675 | 27 | 2 | 1 | 675 | 1 | 671 | 0.0 | 1319 |
| MS.gene32740.t1 | MTR_7g084670 | 40.762 | 341 | 190 | 6 | 340 | 673 | 170 | 505 | 2.70e-79 | 261 |
| MS.gene32740.t1 | MTR_7g084670 | 38.719 | 359 | 188 | 7 | 340 | 671 | 170 | 523 | 2.07e-74 | 249 |
| MS.gene32740.t1 | MTR_7g082860 | 36.443 | 343 | 200 | 7 | 342 | 673 | 43 | 378 | 1.00e-59 | 218 |
| MS.gene32740.t1 | MTR_7g082860 | 36.443 | 343 | 200 | 7 | 342 | 673 | 43 | 378 | 1.90e-59 | 217 |
| MS.gene32740.t1 | MTR_7g082860 | 36.443 | 343 | 200 | 7 | 342 | 673 | 43 | 378 | 2.63e-59 | 217 |
| MS.gene32740.t1 | MTR_7g082860 | 36.443 | 343 | 200 | 7 | 342 | 673 | 43 | 378 | 2.72e-59 | 217 |
| MS.gene32740.t1 | MTR_7g082860 | 36.443 | 343 | 200 | 7 | 342 | 673 | 43 | 378 | 2.93e-59 | 217 |
| MS.gene32740.t1 | MTR_0280s0030 | 28.235 | 340 | 181 | 11 | 368 | 654 | 18 | 347 | 1.60e-28 | 120 |
| MS.gene32740.t1 | MTR_1g052840 | 26.957 | 345 | 192 | 10 | 359 | 654 | 10 | 343 | 8.18e-27 | 114 |
| MS.gene32740.t1 | MTR_1g020070 | 93.478 | 46 | 3 | 0 | 402 | 447 | 1 | 46 | 2.62e-23 | 99.4 |
| MS.gene32740.t1 | MTR_8g465220 | 88.372 | 43 | 5 | 0 | 450 | 492 | 37 | 79 | 1.03e-20 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32740.t1 | AT2G45700 | 55.722 | 734 | 237 | 16 | 13 | 675 | 7 | 723 | 0.0 | 751 |
| MS.gene32740.t1 | AT2G45700 | 49.917 | 601 | 211 | 17 | 13 | 540 | 7 | 590 | 4.06e-174 | 511 |
| MS.gene32740.t1 | AT3G26680 | 40.921 | 369 | 201 | 9 | 312 | 671 | 116 | 476 | 1.91e-80 | 264 |
| MS.gene32740.t1 | AT3G26680 | 40.921 | 369 | 201 | 9 | 312 | 671 | 116 | 476 | 1.91e-80 | 264 |
| MS.gene32740.t1 | AT3G26680 | 40.921 | 369 | 201 | 9 | 312 | 671 | 116 | 476 | 1.91e-80 | 264 |
| MS.gene32740.t1 | AT1G66730 | 38.024 | 334 | 186 | 9 | 342 | 661 | 54 | 380 | 1.31e-61 | 224 |
| MS.gene32740.t1 | AT3G26680 | 39.404 | 302 | 168 | 8 | 312 | 606 | 116 | 409 | 4.83e-60 | 207 |
| MS.gene32740.t1 | AT1G27410 | 27.545 | 334 | 187 | 12 | 362 | 654 | 12 | 331 | 9.51e-30 | 122 |
Find 148 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTTGCAATTTGCCTTTC+TGG | 0.032332 | 3.1:-83255020 | None:intergenic |
| TTCTGGTTTCTAATCCTTCT+AGG | 0.191762 | 3.1:-83255003 | None:intergenic |
| GACGATGTGGGAGCTCAATT+TGG | 0.211717 | 3.1:+83254255 | MS.gene32740:CDS |
| CCTTGTATGGCACACCATTT+AGG | 0.239725 | 3.1:-83255243 | None:intergenic |
| TCTCCTACTGGTTGGACATT+TGG | 0.266596 | 3.1:+83258721 | MS.gene32740:CDS |
| TGTATTACAGCCTCTTGTTT+TGG | 0.274957 | 3.1:-83257827 | None:intergenic |
| ACCCTGCTGCCACCTTCTTC+CGG | 0.280118 | 3.1:-83258764 | None:intergenic |
| TACCAGCTATTTCAACCTTT+TGG | 0.280971 | 3.1:-83256563 | None:intergenic |
| ACCATTGCATCGGCAGATTC+TGG | 0.297717 | 3.1:-83259321 | None:intergenic |
| CGTTTGTTCCTCTTCTGTTT+CGG | 0.309214 | 3.1:+83253559 | MS.gene32740:CDS |
| AGGAAAAGAAAGACTATTCT+TGG | 0.321061 | 3.1:+83258133 | MS.gene32740:intron |
| CCCTGCTGCCACCTTCTTCC+GGG | 0.322980 | 3.1:-83258763 | None:intergenic |
| CACACTTGGTATAATATTAT+CGG | 0.325489 | 3.1:-83259286 | None:intergenic |
| AGGTTCAAAGAGTATAATTA+TGG | 0.338497 | 3.1:-83256625 | None:intergenic |
| TATGTTCATATTTACAAGTC+TGG | 0.362610 | 3.1:-83256502 | None:intergenic |
| TGGTCGTTGGATTTGACTAT+TGG | 0.369431 | 3.1:-83253408 | None:intergenic |
| ATAGTTGCTTTCTCTCCTAC+TGG | 0.374779 | 3.1:+83258709 | MS.gene32740:CDS |
| CCAAGCCTCACCTTACCATT+TGG | 0.382191 | 3.1:-83256648 | None:intergenic |
| AGTGGGAACAATCTCCTCTT+AGG | 0.384009 | 3.1:-83255692 | None:intergenic |
| GTAATTAATTTGTTTGCTGC+TGG | 0.388311 | 3.1:-83255078 | None:intergenic |
| TTCGTTTCATTTCGTTCTAC+AGG | 0.388709 | 3.1:-83255150 | None:intergenic |
| TAGGAGAGAAAGCAACTATA+AGG | 0.389667 | 3.1:-83258705 | None:intergenic |
| TGTTGATATTTCTAATTTAA+CGG | 0.391443 | 3.1:+83253721 | MS.gene32740:CDS |
| AGATTCGCGACATTCCTAAA+TGG | 0.397110 | 3.1:+83255229 | MS.gene32740:CDS |
| ATTAAAAGCTTCTGCTTGAA+TGG | 0.397535 | 3.1:-83257864 | None:intergenic |
| CCATGTATCCATTCAACAAC+AGG | 0.397971 | 3.1:-83254291 | None:intergenic |
| ATCAAAGTATCACCTTATAA+TGG | 0.404366 | 3.1:-83258788 | None:intergenic |
| CCTTCTGAAGGTTACGATAT+CGG | 0.405054 | 3.1:+83253488 | MS.gene32740:CDS |
| GGCAGCAGGGTACCATTATA+AGG | 0.406094 | 3.1:+83258776 | MS.gene32740:CDS |
| ATGCTGAGGTTGAGCCTAGA+AGG | 0.419950 | 3.1:+83254989 | MS.gene32740:CDS |
| AACGAAAACTTCTTCATACT+TGG | 0.420266 | 3.1:-83254325 | None:intergenic |
| TCAAGAATTAAAGTGTGAAT+AGG | 0.423144 | 3.1:-83256830 | None:intergenic |
| TGAGCTCCCACATCGTCATT+AGG | 0.423381 | 3.1:-83254249 | None:intergenic |
| CGTTAGGGAAGAAGTTGATT+GGG | 0.428295 | 3.1:+83254344 | MS.gene32740:CDS |
| CTCATTGGCAGCTATACAAT+TGG | 0.430101 | 3.1:+83257902 | MS.gene32740:CDS |
| AAATCTGAGCGAAAAGTTGA+TGG | 0.430864 | 3.1:+83255045 | MS.gene32740:CDS |
| TCGTTAGGGAAGAAGTTGAT+TGG | 0.433523 | 3.1:+83254343 | MS.gene32740:CDS |
| AAAATATGTAATTTATCATA+TGG | 0.437584 | 3.1:-83256531 | None:intergenic |
| GTGAATTTGTGTGACGAGTT+TGG | 0.438143 | 3.1:+83253671 | MS.gene32740:CDS |
| ACGATGTGGGAGCTCAATTT+GGG | 0.440843 | 3.1:+83254256 | MS.gene32740:CDS |
| TCGGAAAGGTGTTCCTTGTA+TGG | 0.443532 | 3.1:-83255256 | None:intergenic |
| TGTGAGAGAGGTTTGAGAAT+TGG | 0.444439 | 3.1:-83253383 | None:intergenic |
| GAATCAGAGTCTAATGTAGA+AGG | 0.447226 | 3.1:-83253533 | None:intergenic |
| AACGACTGTCTCGATAAATC+TGG | 0.456921 | 3.1:+83253767 | MS.gene32740:CDS |
| TCCCGGAAGAAGGTGGCAGC+AGG | 0.457757 | 3.1:+83258762 | MS.gene32740:CDS |
| TGACTATTGGATTGTGAGAG+AGG | 0.458063 | 3.1:-83253395 | None:intergenic |
| TTCCCACTGGTAGCAAATCC+CGG | 0.459567 | 3.1:-83255111 | None:intergenic |
| TGGGTTTCTTGGATGGTCGT+TGG | 0.460999 | 3.1:-83253421 | None:intergenic |
| TGGTATTGGCGTGACTTGTT+TGG | 0.463977 | 3.1:+83256581 | MS.gene32740:CDS |
| AACCAAAAGGTTGAAATAGC+TGG | 0.464893 | 3.1:+83256561 | MS.gene32740:CDS |
| TTGGATGCCAACCATTGTCC+AGG | 0.465014 | 3.1:+83256600 | MS.gene32740:CDS |
| AGCCTCACCTTACCATTTGG+AGG | 0.467125 | 3.1:-83256645 | None:intergenic |
| CCTAAATGGTGTGCCATACA+AGG | 0.467417 | 3.1:+83255243 | MS.gene32740:CDS |
| CTTTCCATGATTGAATGACT+TGG | 0.468183 | 3.1:-83256457 | None:intergenic |
| AAAACTCCCCTGTTGTTGAA+TGG | 0.469285 | 3.1:+83254283 | MS.gene32740:CDS |
| CTTAGAAGAGGAATCGCCTT+AGG | 0.471900 | 3.1:+83254931 | MS.gene32740:CDS |
| TTGCTTTCTCTCCTACTGGT+TGG | 0.480522 | 3.1:+83258713 | MS.gene32740:CDS |
| ATACCAAGTGTGAATAATGA+TGG | 0.481112 | 3.1:+83259297 | MS.gene32740:CDS |
| TCAGTAATTCATTAGAGTCC+AGG | 0.482765 | 3.1:+83253612 | MS.gene32740:CDS |
| ATACTCTTTGAACCTCCAAA+TGG | 0.489494 | 3.1:+83256633 | MS.gene32740:CDS |
| ACACTTGGTATAATATTATC+GGG | 0.493037 | 3.1:-83259285 | None:intergenic |
| AAGCTGCAATGCTCACTGTA+AGG | 0.494474 | 3.1:-83259228 | None:intergenic |
| CTCACCAAGTCATTCAATCA+TGG | 0.494648 | 3.1:+83256453 | MS.gene32740:CDS |
| AAGGTTGAAATAGCTGGTAT+TGG | 0.497008 | 3.1:+83256567 | MS.gene32740:CDS |
| CTCGCTTGAACTTGAAGAGG+AGG | 0.497023 | 3.1:-83254956 | None:intergenic |
| AGCTTGCAAGTGTCCACATA+GGG | 0.499017 | 3.1:-83258289 | None:intergenic |
| GTTGAATGGATACATGGTCT+CGG | 0.500479 | 3.1:+83254297 | MS.gene32740:CDS |
| ATAGGACATGTCCGCAGTAA+AGG | 0.503218 | 3.1:-83256812 | None:intergenic |
| TACCTGTGGGTTGCAGTATG+TGG | 0.505307 | 3.1:-83256855 | None:intergenic |
| TTGAATGGATACATGGTCTC+GGG | 0.505973 | 3.1:+83254298 | MS.gene32740:CDS |
| CCTGTTGTTGAATGGATACA+TGG | 0.506812 | 3.1:+83254291 | MS.gene32740:CDS |
| TATCTAGGCAGTACTTCATA+CGG | 0.511622 | 3.1:+83256754 | MS.gene32740:intron |
| AACAAAACGACACCGTTCCC+TGG | 0.520920 | 3.1:+83253449 | MS.gene32740:CDS |
| GAAGTGAGTGTGATCTGAAT+CGG | 0.522765 | 3.1:-83253306 | None:intergenic |
| TTGAAGGATCTCTTAAACAT+GGG | 0.525506 | 3.1:+83254859 | MS.gene32740:intron |
| AAAAGAAAGACTATTCTTGG+AGG | 0.527109 | 3.1:+83258136 | MS.gene32740:CDS |
| TTTCATTTCGTTCTACAGGA+GGG | 0.529107 | 3.1:-83255146 | None:intergenic |
| CTTGAAGGATCTCTTAAACA+TGG | 0.529942 | 3.1:+83254858 | MS.gene32740:intron |
| TTCATTTCGTTCTACAGGAG+GGG | 0.530245 | 3.1:-83255145 | None:intergenic |
| CTTTGAACCTCCAAATGGTA+AGG | 0.531062 | 3.1:+83256638 | MS.gene32740:CDS |
| GGTCCATCATTATTCACACT+TGG | 0.539610 | 3.1:-83259300 | None:intergenic |
| AAAAGAAGTCTCCCGGAAGA+AGG | 0.539697 | 3.1:+83258752 | MS.gene32740:CDS |
| TTTGTGAATGCAGATTATCA+AGG | 0.542931 | 3.1:+83256429 | MS.gene32740:intron |
| CGAAACAGAAGAGGAACAAA+CGG | 0.547884 | 3.1:-83253558 | None:intergenic |
| AAGCTTGCAAGTGTCCACAT+AGG | 0.550517 | 3.1:-83258290 | None:intergenic |
| GATGCTTTCAAATACCTAAG+AGG | 0.552944 | 3.1:+83255678 | MS.gene32740:CDS |
| ATATTCATGTTGCCCCTATG+TGG | 0.553521 | 3.1:+83258276 | MS.gene32740:CDS |
| TACAAGTCTGGCTGTAACAG+AGG | 0.554290 | 3.1:-83256490 | None:intergenic |
| ACCAGAATCTGCCGATGCAA+TGG | 0.554326 | 3.1:+83259320 | MS.gene32740:CDS |
| TTCCGGGATTTGCTACCAGT+GGG | 0.558013 | 3.1:+83255109 | MS.gene32740:CDS |
| TTTCTCGCTTGAACTTGAAG+AGG | 0.559015 | 3.1:-83254959 | None:intergenic |
| GTTTCATTTCGTTCTACAGG+AGG | 0.563033 | 3.1:-83255147 | None:intergenic |
| TATGGAACCTGGACAATGGT+TGG | 0.563928 | 3.1:-83256607 | None:intergenic |
| CTCTTCTGTCAGCCATTGCA+AGG | 0.565749 | 3.1:-83254370 | None:intergenic |
| TAAGAGGAGATTGTTCCCAC+TGG | 0.566874 | 3.1:+83255694 | MS.gene32740:CDS |
| TTTCAGCTCCGAAACAGAAG+AGG | 0.567275 | 3.1:-83253567 | None:intergenic |
| ATGTTTGGAGTTTACAGAGG+AGG | 0.568194 | 3.1:+83258217 | MS.gene32740:CDS |
| CGATATCGTAACCTTCAGAA+GGG | 0.570057 | 3.1:-83253487 | None:intergenic |
| ACTTGAAGAGGAGGTTCCTA+AGG | 0.571607 | 3.1:-83254947 | None:intergenic |
| GTTTCTCACACACTTCCACA+TGG | 0.572957 | 3.1:+83255716 | MS.gene32740:CDS |
| AACATGGGTATAACTGCACT+TGG | 0.574353 | 3.1:+83254874 | MS.gene32740:CDS |
| GGTGATTGAGTTTGAGTGAG+AGG | 0.575013 | 3.1:-83253362 | None:intergenic |
| AGACTTGTAAATATGAACAT+AGG | 0.576180 | 3.1:+83256504 | MS.gene32740:CDS |
| ATCTAGGCAGTACTTCATAC+GGG | 0.578082 | 3.1:+83256755 | MS.gene32740:intron |
| ATGTTCTCTTTACCAGGGAA+CGG | 0.583522 | 3.1:-83253461 | None:intergenic |
| AAGAGTATAATTATGGAACC+TGG | 0.584062 | 3.1:-83256618 | None:intergenic |
| CGAAATGAAACGAACACAAG+TGG | 0.584881 | 3.1:+83255159 | MS.gene32740:CDS |
| AAAATGTTTGGAGTTTACAG+AGG | 0.587038 | 3.1:+83258214 | MS.gene32740:CDS |
| TTTCCGGGATTTGCTACCAG+TGG | 0.590063 | 3.1:+83255108 | MS.gene32740:CDS |
| CCGATATCGTAACCTTCAGA+AGG | 0.595893 | 3.1:-83253488 | None:intergenic |
| ATGTTGCTTACCACTCGGAA+AGG | 0.604789 | 3.1:-83255270 | None:intergenic |
| TTGCCAAATGTCCAACCAGT+AGG | 0.605425 | 3.1:-83258724 | None:intergenic |
| AGAAGTCTCCCGGAAGAAGG+TGG | 0.608363 | 3.1:+83258755 | MS.gene32740:CDS |
| CGAGAAACATGAGGATGCTG+AGG | 0.613762 | 3.1:+83254975 | MS.gene32740:CDS |
| GCTCTCTCAGAACTTAGAAG+AGG | 0.616459 | 3.1:+83254919 | MS.gene32740:CDS |
| CATGAGAGAAACCATTGCAT+CGG | 0.617976 | 3.1:-83259331 | None:intergenic |
| TGAGCGAAAAGTTGATGGAA+CGG | 0.620111 | 3.1:+83255050 | MS.gene32740:CDS |
| GTATGACTTTCCAAAACAAG+AGG | 0.622699 | 3.1:+83257817 | MS.gene32740:intron |
| CACCACATACTGCAACCCAC+AGG | 0.625431 | 3.1:+83256853 | MS.gene32740:CDS |
| AAATATCAACACCACAGAGA+GGG | 0.625848 | 3.1:-83253709 | None:intergenic |
| CTTGCAATGGCTGACAGAAG+AGG | 0.630164 | 3.1:+83254371 | MS.gene32740:CDS |
| CCCGGAAGAAGGTGGCAGCA+GGG | 0.632641 | 3.1:+83258763 | MS.gene32740:CDS |
| AGAAGGATTAGAAACCAGAA+AGG | 0.634777 | 3.1:+83255006 | MS.gene32740:CDS |
| GCTCCCACATCGTCATTAGG+AGG | 0.635319 | 3.1:-83254246 | None:intergenic |
| GAAGGTTACGATATCGGTCA+CGG | 0.638207 | 3.1:+83253494 | MS.gene32740:CDS |
| TGTGCCTCCTAATGACGATG+TGG | 0.641693 | 3.1:+83254242 | MS.gene32740:CDS |
| ACTGGTTGGACATTTGGCAA+AGG | 0.642161 | 3.1:+83258727 | MS.gene32740:CDS |
| TCTGTTGATTGCCCTCTCTG+TGG | 0.643991 | 3.1:+83253698 | MS.gene32740:CDS |
| AAGTTCAAGCGAGAAACATG+AGG | 0.646074 | 3.1:+83254966 | MS.gene32740:CDS |
| CATGTATCCATTCAACAACA+GGG | 0.647033 | 3.1:-83254290 | None:intergenic |
| TAATTATGGAACCTGGACAA+TGG | 0.648706 | 3.1:-83256611 | None:intergenic |
| AAACAAACTTACGGTCCATG+TGG | 0.651379 | 3.1:-83255731 | None:intergenic |
| TGATATTTCTAATTTAACGG+AGG | 0.657150 | 3.1:+83253724 | MS.gene32740:CDS |
| TTGATTGGGATACCTTGCAA+TGG | 0.668184 | 3.1:+83254358 | MS.gene32740:CDS |
| GATATCGTAACCTTCAGAAG+GGG | 0.671458 | 3.1:-83253486 | None:intergenic |
| TTACAGAGGAGGATATGCAG+TGG | 0.677061 | 3.1:+83258228 | MS.gene32740:CDS |
| ATATCGTAACCTTCAGAAGG+GGG | 0.678710 | 3.1:-83253485 | None:intergenic |
| GGGGAATGTTCTCTTTACCA+GGG | 0.679021 | 3.1:-83253466 | None:intergenic |
| AACAGAAGAGGAACAAACGG+TGG | 0.680985 | 3.1:-83253555 | None:intergenic |
| GCACATATCAAGTCAATATG+CGG | 0.689672 | 3.1:+83258325 | MS.gene32740:CDS |
| GCTTGCAAGTGTCCACATAG+GGG | 0.691672 | 3.1:-83258288 | None:intergenic |
| GTGCCTCCTAATGACGATGT+GGG | 0.694456 | 3.1:+83254243 | MS.gene32740:CDS |
| GAAATATCAACACCACAGAG+AGG | 0.704824 | 3.1:-83253710 | None:intergenic |
| TGGCAAACAATCCTTTACTG+CGG | 0.706170 | 3.1:+83256801 | MS.gene32740:CDS |
| ACAAGGAACACCTTTCCGAG+TGG | 0.728495 | 3.1:+83255260 | MS.gene32740:CDS |
| GAAGTGTGTGAGAAACCAGT+GGG | 0.728648 | 3.1:-83255709 | None:intergenic |
| ATGTATCCATTCAACAACAG+GGG | 0.731322 | 3.1:-83254289 | None:intergenic |
| GGAAGTGTGTGAGAAACCAG+TGG | 0.737251 | 3.1:-83255710 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGTAATTTATCATA+TGG | - | chr3.1:83256534-83256553 | None:intergenic | 10.0% |
| !! | AATGAACTTAAATAAAATTA+AGG | - | chr3.1:83256960-83256979 | None:intergenic | 10.0% |
| !! | CATTAAATAATTTATGTATT+TGG | - | chr3.1:83258934-83258953 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAATATCAAC+AGG | - | chr3.1:83255307-83255326 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAATACATCTGA+TGG | - | chr3.1:83258666-83258685 | None:intergenic | 15.0% |
| !! | ATGCAAAAATTATTAGAAAA+AGG | - | chr3.1:83257535-83257554 | None:intergenic | 15.0% |
| !! | CATTAAAAGAAATAAACAAA+TGG | - | chr3.1:83257155-83257174 | None:intergenic | 15.0% |
| !! | TTACAATAAAAAGAACATAT+TGG | - | chr3.1:83257398-83257417 | None:intergenic | 15.0% |
| !! | TTCAAAAAAAAAGAACATAT+TGG | - | chr3.1:83257372-83257391 | None:intergenic | 15.0% |
| !!! | ATAAAATAATTTTTTTTCCC+AGG | + | chr3.1:83256338-83256357 | MS.gene32740:intron | 15.0% |
| !!! | ATAATTTATGTATTTGGTTT+AGG | - | chr3.1:83258928-83258947 | None:intergenic | 15.0% |
| !!! | ATTAATTACTGAATATTTTC+CGG | + | chr3.1:83255092-83255111 | MS.gene32740:CDS | 15.0% |
| !!! | TGTTGATATTTCTAATTTAA+CGG | + | chr3.1:83253721-83253740 | MS.gene32740:CDS | 15.0% |
| !!! | TTAAATTAATTTGAATTTCG+AGG | - | chr3.1:83255964-83255983 | None:intergenic | 15.0% |
| !!! | TTATCTTTAAAAAGGTTTTT+AGG | - | chr3.1:83257279-83257298 | None:intergenic | 15.0% |
| !!! | TTCTTTTTATTGTAAGATTA+GGG | + | chr3.1:83257403-83257422 | MS.gene32740:intron | 15.0% |
| !!! | TTTATATCTTTATTTCTCAA+CGG | - | chr3.1:83257247-83257266 | None:intergenic | 15.0% |
| !!! | TTTGATAGGTTTTTATTTTT+TGG | + | chr3.1:83253916-83253935 | MS.gene32740:intron | 15.0% |
| !!! | TTTTTTTTTTTATTCAGAGT+CGG | + | chr3.1:83258677-83258696 | MS.gene32740:intron | 15.0% |
| !! | AAATATGTCATATAAAAGTG+TGG | + | chr3.1:83256171-83256190 | MS.gene32740:intron | 20.0% |
| !! | ATGAAATATATTGTGTCTTA+AGG | - | chr3.1:83255350-83255369 | None:intergenic | 20.0% |
| !! | ATTATTAGAAAAAGGCTAAA+TGG | - | chr3.1:83257527-83257546 | None:intergenic | 20.0% |
| !! | ATTGTAATAATCTGCTAATA+AGG | - | chr3.1:83256373-83256392 | None:intergenic | 20.0% |
| !! | ATTGTATAAAACATGATTGA+GGG | - | chr3.1:83255543-83255562 | None:intergenic | 20.0% |
| !! | CCAAAATAATCTAGTAATAA+AGG | - | chr3.1:83258816-83258835 | None:intergenic | 20.0% |
| !! | GAACAATCAAATAAATTCAA+AGG | - | chr3.1:83254470-83254489 | None:intergenic | 20.0% |
| !! | GTTTAAAAAAACCATATTTG+AGG | - | chr3.1:83257580-83257599 | None:intergenic | 20.0% |
| !! | TAAAGATATCTGATATGTTA+AGG | - | chr3.1:83254030-83254049 | None:intergenic | 20.0% |
| !! | TGAACTAGTTAATACTAATA+GGG | + | chr3.1:83259112-83259131 | MS.gene32740:intron | 20.0% |
| !! | TTAAGACACAATATATTTCA+TGG | + | chr3.1:83255349-83255368 | MS.gene32740:intron | 20.0% |
| !!! | ACAGTTTAGAATTTAAGTTT+TGG | + | chr3.1:83256008-83256027 | MS.gene32740:intron | 20.0% |
| !!! | ACTCTGATTGTAATAATTTT+CGG | - | chr3.1:83256246-83256265 | None:intergenic | 20.0% |
| !!! | CACATTATTTTAGTAAGTAT+AGG | + | chr3.1:83257690-83257709 | MS.gene32740:intron | 20.0% |
| !!! | CCTTTATTACTAGATTATTT+TGG | + | chr3.1:83258813-83258832 | MS.gene32740:intron | 20.0% |
| !!! | CTGATATTTTCTTTTTTATC+AGG | + | chr3.1:83259196-83259215 | MS.gene32740:intron | 20.0% |
| !!! | CTTTATTGTTTAAGTTTGAT+AGG | + | chr3.1:83253902-83253921 | MS.gene32740:intron | 20.0% |
| !!! | GTAAATTGTTTCTTGTAAAT+AGG | + | chr3.1:83258964-83258983 | MS.gene32740:intron | 20.0% |
| !!! | GTTCTTTTTATTGTAAGATT+AGG | + | chr3.1:83257402-83257421 | MS.gene32740:intron | 20.0% |
| !!! | GTTTTTAATTAAGAAAGAAG+AGG | + | chr3.1:83254088-83254107 | MS.gene32740:intron | 20.0% |
| !!! | GTTTTTGTTTTTGTTTATCT+AGG | + | chr3.1:83256739-83256758 | MS.gene32740:intron | 20.0% |
| !!! | TAAACTCCAAACATTTTAAA+AGG | - | chr3.1:83258211-83258230 | None:intergenic | 20.0% |
| !!! | TAATATATTTCTGTAGGAAA+TGG | - | chr3.1:83257346-83257365 | None:intergenic | 20.0% |
| !!! | TGGTATTAATATATTTCTGT+AGG | - | chr3.1:83257352-83257371 | None:intergenic | 20.0% |
| !!! | TTAACTTTGAAATTTTACTC+TGG | + | chr3.1:83256991-83257010 | MS.gene32740:intron | 20.0% |
| !!! | TTAATTACTGAATATTTTCC+GGG | + | chr3.1:83255093-83255112 | MS.gene32740:CDS | 20.0% |
| ! | AAAAAAAGATAGGGCAAAAT+TGG | - | chr3.1:83255607-83255626 | None:intergenic | 25.0% |
| ! | AAATTCTTAATATTGTACGC+AGG | + | chr3.1:83254218-83254237 | MS.gene32740:intron | 25.0% |
| ! | AACTAAAAAGTTGCGTTATT+CGG | - | chr3.1:83258625-83258644 | None:intergenic | 25.0% |
| ! | AATACCAAAAAGTTAGCATA+TGG | - | chr3.1:83258381-83258400 | None:intergenic | 25.0% |
| ! | AATAGTTTAATACACTTCGT+CGG | - | chr3.1:83257474-83257493 | None:intergenic | 25.0% |
| ! | ACACTTGGTATAATATTATC+GGG | - | chr3.1:83259288-83259307 | None:intergenic | 25.0% |
| ! | ACATTATGTAACGTAAAAGA+TGG | - | chr3.1:83255415-83255434 | None:intergenic | 25.0% |
| ! | ACGTTTCAAACAAATACTAA+AGG | - | chr3.1:83257990-83258009 | None:intergenic | 25.0% |
| ! | AGACTTGTAAATATGAACAT+AGG | + | chr3.1:83256504-83256523 | MS.gene32740:CDS | 25.0% |
| ! | AGATCAAAATATATTGAAGC+GGG | + | chr3.1:83257764-83257783 | MS.gene32740:intron | 25.0% |
| ! | ATCCACATCAAAAAAAGATA+GGG | - | chr3.1:83255616-83255635 | None:intergenic | 25.0% |
| ! | ATCTAAAAATATGTCTGGTT+TGG | + | chr3.1:83254688-83254707 | MS.gene32740:intron | 25.0% |
| ! | ATGGAGACAATAAAATTCAT+TGG | - | chr3.1:83256271-83256290 | None:intergenic | 25.0% |
| ! | ATTCGTGAATTGTTTCAATT+TGG | + | chr3.1:83255934-83255953 | MS.gene32740:intron | 25.0% |
| ! | CAACGATAATTAAGCTTATT+AGG | - | chr3.1:83256682-83256701 | None:intergenic | 25.0% |
| ! | CAATTCACGAATATTTAACA+AGG | - | chr3.1:83255926-83255945 | None:intergenic | 25.0% |
| ! | CACACTTGGTATAATATTAT+CGG | - | chr3.1:83259289-83259308 | None:intergenic | 25.0% |
| ! | CATTGTATAAAACATGATTG+AGG | - | chr3.1:83255544-83255563 | None:intergenic | 25.0% |
| ! | CGTTTCAAACAAATACTAAA+GGG | - | chr3.1:83257989-83258008 | None:intergenic | 25.0% |
| ! | CTAATAAGCTTAATTATCGT+TGG | + | chr3.1:83256680-83256699 | MS.gene32740:intron | 25.0% |
| ! | CTGAACTAGTTAATACTAAT+AGG | + | chr3.1:83259111-83259130 | MS.gene32740:intron | 25.0% |
| ! | GAACTAGTTAATACTAATAG+GGG | + | chr3.1:83259113-83259132 | MS.gene32740:intron | 25.0% |
| ! | GAGATCAAAATATATTGAAG+CGG | + | chr3.1:83257763-83257782 | MS.gene32740:intron | 25.0% |
| ! | GATCATTCATTATTCATATG+TGG | - | chr3.1:83256884-83256903 | None:intergenic | 25.0% |
| ! | GTTACCAAATTGTACTAAAT+TGG | - | chr3.1:83256055-83256074 | None:intergenic | 25.0% |
| ! | TAGAGATCTAAAAATATGTC+TGG | + | chr3.1:83254683-83254702 | MS.gene32740:intron | 25.0% |
| ! | TATGTTCATATTTACAAGTC+TGG | - | chr3.1:83256505-83256524 | None:intergenic | 25.0% |
| ! | TCAAGAATTAAAGTGTGAAT+AGG | - | chr3.1:83256833-83256852 | None:intergenic | 25.0% |
| ! | TTATTATTATATACTCCCTC+CGG | + | chr3.1:83258838-83258857 | MS.gene32740:intron | 25.0% |
| ! | TTCAAGTACAAAAAGTAAAG+AGG | - | chr3.1:83254844-83254863 | None:intergenic | 25.0% |
| ! | TTGTATAAAACATGATTGAG+GGG | - | chr3.1:83255542-83255561 | None:intergenic | 25.0% |
| !! | AGGTTCAAAGAGTATAATTA+TGG | - | chr3.1:83256628-83256647 | None:intergenic | 25.0% |
| !! | ATCAAAGTATCACCTTATAA+TGG | - | chr3.1:83258791-83258810 | None:intergenic | 25.0% |
| !! | CTAACACGTTTAATTTATAC+AGG | + | chr3.1:83255656-83255675 | MS.gene32740:intron | 25.0% |
| !! | CTCTGATTGTAATAATTTTC+GGG | - | chr3.1:83256245-83256264 | None:intergenic | 25.0% |
| !! | CTGGAAGTTTATCTTTAAAA+AGG | - | chr3.1:83257287-83257306 | None:intergenic | 25.0% |
| !! | TATTTCTGATTCCTTATTTC+CGG | + | chr3.1:83255434-83255453 | MS.gene32740:intron | 25.0% |
| !! | TGATATTTCTAATTTAACGG+AGG | + | chr3.1:83253724-83253743 | MS.gene32740:CDS | 25.0% |
| !! | TTTGACTTATAAACTAGAAG+AGG | - | chr3.1:83254139-83254158 | None:intergenic | 25.0% |
| !!! | AATTTGAAAATTAGCTCTGT+AGG | + | chr3.1:83254531-83254550 | MS.gene32740:intron | 25.0% |
| !!! | ATAGTTTTGAAGTGTAGATT+TGG | + | chr3.1:83258022-83258041 | MS.gene32740:intron | 25.0% |
| !!! | ATTGTAATAATTTTCGGGTA+GGG | - | chr3.1:83256240-83256259 | None:intergenic | 25.0% |
| !!! | ATTTGGTAACAGTTTAGTTT+TGG | + | chr3.1:83256065-83256084 | MS.gene32740:intron | 25.0% |
| !!! | GGTATTTTTCAATGTTGAAA+AGG | + | chr3.1:83258395-83258414 | MS.gene32740:intron | 25.0% |
| !!! | TCTTTACTTTTTGTACTTGA+AGG | + | chr3.1:83254843-83254862 | MS.gene32740:intron | 25.0% |
| !!! | TGTGCTTTTTATGTTTCTAT+AGG | + | chr3.1:83258113-83258132 | MS.gene32740:intron | 25.0% |
| !!! | TTCTTAAAAGCATTTTAGCA+AGG | + | chr3.1:83257659-83257678 | MS.gene32740:intron | 25.0% |
| !!! | TTTCTTTTTTATCAGGTATG+AGG | + | chr3.1:83259203-83259222 | MS.gene32740:intron | 25.0% |
| AAAAGAAAGACTATTCTTGG+AGG | + | chr3.1:83258136-83258155 | MS.gene32740:CDS | 30.0% | |
| AAACAAAAACAAAAACCAGC+TGG | - | chr3.1:83256735-83256754 | None:intergenic | 30.0% | |
| AAACATGTTTGCCTCAAATA+TGG | + | chr3.1:83257566-83257585 | MS.gene32740:intron | 30.0% | |
| AAAGGAACATATCTTAAAGC+AGG | + | chr3.1:83258413-83258432 | MS.gene32740:intron | 30.0% | |
| AACGAAAACTTCTTCATACT+TGG | - | chr3.1:83254328-83254347 | None:intergenic | 30.0% | |
| AATTCAAAGGAATAAGTCTC+TGG | - | chr3.1:83254457-83254476 | None:intergenic | 30.0% | |
| AATTCACTTTGACACTATCT+TGG | - | chr3.1:83257021-83257040 | None:intergenic | 30.0% | |
| AGGAAAAGAAAGACTATTCT+TGG | + | chr3.1:83258133-83258152 | MS.gene32740:intron | 30.0% | |
| ATACCAAGTGTGAATAATGA+TGG | + | chr3.1:83259297-83259316 | MS.gene32740:CDS | 30.0% | |
| ATAGTTTAATACACTTCGTC+GGG | - | chr3.1:83257473-83257492 | None:intergenic | 30.0% | |
| ATTAAAAGCTTCTGCTTGAA+TGG | - | chr3.1:83257867-83257886 | None:intergenic | 30.0% | |
| ATTCACTTTGACACTATCTT+GGG | - | chr3.1:83257020-83257039 | None:intergenic | 30.0% | |
| CAAATTGTACTAAATTGGTG+AGG | - | chr3.1:83256050-83256069 | None:intergenic | 30.0% | |
| CATCACATGATAAAACTCAT+TGG | + | chr3.1:83256288-83256307 | MS.gene32740:intron | 30.0% | |
| CTCACCAATTTAGTACAATT+TGG | + | chr3.1:83256048-83256067 | MS.gene32740:intron | 30.0% | |
| GATCCACATCAAAAAAAGAT+AGG | - | chr3.1:83255617-83255636 | None:intergenic | 30.0% | |
| GTAAGAATCAAAATGCATCA+AGG | - | chr3.1:83259088-83259107 | None:intergenic | 30.0% | |
| GTCAACTTTCTCTTGTAAAT+AGG | - | chr3.1:83258865-83258884 | None:intergenic | 30.0% | |
| GTCTTAAGGAAATGCATAAA+GGG | - | chr3.1:83255336-83255355 | None:intergenic | 30.0% | |
| TAAGTCAAAACAGATTGATG+AGG | + | chr3.1:83254150-83254169 | MS.gene32740:intron | 30.0% | |
| TATATTGCATAGACACAGAA+AGG | - | chr3.1:83255824-83255843 | None:intergenic | 30.0% | |
| TGTAAAAGATCAATGTACCA+TGG | + | chr3.1:83254575-83254594 | MS.gene32740:intron | 30.0% | |
| TGTCTTAAGGAAATGCATAA+AGG | - | chr3.1:83255337-83255356 | None:intergenic | 30.0% | |
| TTGAAGGATCTCTTAAACAT+GGG | + | chr3.1:83254859-83254878 | MS.gene32740:intron | 30.0% | |
| TTTACAGCTTTCAAATGTGA+TGG | + | chr3.1:83258593-83258612 | MS.gene32740:intron | 30.0% | |
| TTTGTGAATGCAGATTATCA+AGG | + | chr3.1:83256429-83256448 | MS.gene32740:intron | 30.0% | |
| ! | AAAATGTTTGGAGTTTACAG+AGG | + | chr3.1:83258214-83258233 | MS.gene32740:CDS | 30.0% |
| ! | AAACATAAAAAGCACACACA+AGG | - | chr3.1:83258109-83258128 | None:intergenic | 30.0% |
| ! | AACATAAAAAGCACACACAA+GGG | - | chr3.1:83258108-83258127 | None:intergenic | 30.0% |
| ! | AAGAGTATAATTATGGAACC+TGG | - | chr3.1:83256621-83256640 | None:intergenic | 30.0% |
| ! | ACAACCATATGCTAACTTTT+TGG | + | chr3.1:83258374-83258393 | MS.gene32740:intron | 30.0% |
| ! | AGGTTTAAAGTTTCTGTTGA+TGG | + | chr3.1:83254808-83254827 | MS.gene32740:intron | 30.0% |
| ! | AGTATGAAGAAGTTTTCGTT+AGG | + | chr3.1:83254328-83254347 | MS.gene32740:CDS | 30.0% |
| ! | ATAAAATGTTGCTTACCACT+CGG | - | chr3.1:83255278-83255297 | None:intergenic | 30.0% |
| ! | CGAGTAATCATTTTGCAATT+AGG | + | chr3.1:83254613-83254632 | MS.gene32740:intron | 30.0% |
| ! | GTATGAAGAAGTTTTCGTTA+GGG | + | chr3.1:83254329-83254348 | MS.gene32740:CDS | 30.0% |
| ! | TATTTTGCCTCTAAACCAAA+AGG | + | chr3.1:83256548-83256567 | MS.gene32740:CDS | 30.0% |
| ! | TCTCATTAGTTTCCTGTAAT+TGG | - | chr3.1:83258072-83258091 | None:intergenic | 30.0% |
| ! | TTGTTTCTTGTAAATAGGAC+CGG | + | chr3.1:83258969-83258988 | MS.gene32740:intron | 30.0% |
| ! | TTTTCGTTACAGTGAAGAAA+TGG | + | chr3.1:83256781-83256800 | MS.gene32740:CDS | 30.0% |
| ! | TTTTCTAGACCGTTTCAAAA+AGG | - | chr3.1:83255386-83255405 | None:intergenic | 30.0% |
| !! | AGAAGAAAGCCTTTTTGAAA+CGG | + | chr3.1:83255374-83255393 | MS.gene32740:intron | 30.0% |
| !! | CAATGAGTTTTATCATGTGA+TGG | - | chr3.1:83256290-83256309 | None:intergenic | 30.0% |
| !! | CAGAAAAAAAGCTTTGGATT+CGG | + | chr3.1:83253646-83253665 | MS.gene32740:CDS | 30.0% |
| !! | GTAATTAATTTGTTTGCTGC+TGG | - | chr3.1:83255081-83255100 | None:intergenic | 30.0% |
| !!! | AGCATGTACAATCTTTTTTC+TGG | - | chr3.1:83254902-83254921 | None:intergenic | 30.0% |
| !!! | ATTTCAACCTTTTGGTTTAG+AGG | - | chr3.1:83256558-83256577 | None:intergenic | 30.0% |
| !!! | GATTGTAATAATTTTCGGGT+AGG | - | chr3.1:83256241-83256260 | None:intergenic | 30.0% |
| !!! | GCATGTACAATCTTTTTTCT+GGG | - | chr3.1:83254901-83254920 | None:intergenic | 30.0% |
| !!! | GTTACGCCTTTTAAAATGTT+TGG | + | chr3.1:83258202-83258221 | MS.gene32740:CDS | 30.0% |
| !!! | TTGTAATAATTTTCGGGTAG+GGG | - | chr3.1:83256239-83256258 | None:intergenic | 30.0% |
| AAAGGTAAAAAGAAGTCTCC+CGG | + | chr3.1:83258745-83258764 | MS.gene32740:CDS | 35.0% | |
| AAATATCAACACCACAGAGA+GGG | - | chr3.1:83253712-83253731 | None:intergenic | 35.0% | |
| AAATCTGAGCGAAAAGTTGA+TGG | + | chr3.1:83255045-83255064 | MS.gene32740:CDS | 35.0% | |
| AACCAAAAGGTTGAAATAGC+TGG | + | chr3.1:83256561-83256580 | MS.gene32740:CDS | 35.0% | |
| AAGGTTGAAATAGCTGGTAT+TGG | + | chr3.1:83256567-83256586 | MS.gene32740:CDS | 35.0% | |
| AATGATTACTCGACTCAACT+AGG | - | chr3.1:83254605-83254624 | None:intergenic | 35.0% | |
| AGAAGAGGTTTGTAGTTACT+AGG | + | chr3.1:83254103-83254122 | MS.gene32740:intron | 35.0% | |
| AGAAGGATTAGAAACCAGAA+AGG | + | chr3.1:83255006-83255025 | MS.gene32740:CDS | 35.0% | |
| AGATAGGGCAAAATTGGTAA+TGG | - | chr3.1:83255601-83255620 | None:intergenic | 35.0% | |
| ATACTCTTTGAACCTCCAAA+TGG | + | chr3.1:83256633-83256652 | MS.gene32740:CDS | 35.0% | |
| ATGTATCCATTCAACAACAG+GGG | - | chr3.1:83254292-83254311 | None:intergenic | 35.0% | |
| ATTGATGAGGTTGTGTGATT+TGG | + | chr3.1:83254163-83254182 | MS.gene32740:intron | 35.0% | |
| CAAGATTGTTTCGTCTCATA+TGG | - | chr3.1:83254064-83254083 | None:intergenic | 35.0% | |
| CACATGCAGAAACAAACTTA+CGG | - | chr3.1:83255743-83255762 | None:intergenic | 35.0% | |
| CAGAGTTCCAATTTGTACTT+TGG | + | chr3.1:83256393-83256412 | MS.gene32740:intron | 35.0% | |
| CATGTATCCATTCAACAACA+GGG | - | chr3.1:83254293-83254312 | None:intergenic | 35.0% | |
| CTAAACTACCTTTAGCTGTT+TGG | + | chr3.1:83256205-83256224 | MS.gene32740:intron | 35.0% | |
| CTTGAAGGATCTCTTAAACA+TGG | + | chr3.1:83254858-83254877 | MS.gene32740:intron | 35.0% | |
| CTTTCCATGATTGAATGACT+TGG | - | chr3.1:83256460-83256479 | None:intergenic | 35.0% | |
| CTTTCTCTTGTAAATAGGAC+CGG | - | chr3.1:83258860-83258879 | None:intergenic | 35.0% | |
| GAATCAGAGTCTAATGTAGA+AGG | - | chr3.1:83253536-83253555 | None:intergenic | 35.0% | |
| GAGTTCAATTCATCTCATTC+TGG | + | chr3.1:83257927-83257946 | MS.gene32740:intron | 35.0% | |
| GATGCTTTCAAATACCTAAG+AGG | + | chr3.1:83255678-83255697 | MS.gene32740:CDS | 35.0% | |
| GCACATATCAAGTCAATATG+CGG | + | chr3.1:83258325-83258344 | MS.gene32740:CDS | 35.0% | |
| GTATGACTTTCCAAAACAAG+AGG | + | chr3.1:83257817-83257836 | MS.gene32740:intron | 35.0% | |
| TAATAAGGAGCTAAACACCT+GGG | - | chr3.1:83256358-83256377 | None:intergenic | 35.0% | |
| TAATTATGGAACCTGGACAA+TGG | - | chr3.1:83256614-83256633 | None:intergenic | 35.0% | |
| TAGGAGAGAAAGCAACTATA+AGG | - | chr3.1:83258708-83258727 | None:intergenic | 35.0% | |
| TATCTAGGCAGTACTTCATA+CGG | + | chr3.1:83256754-83256773 | MS.gene32740:intron | 35.0% | |
| TATCTGATATGTTAAGGTGC+AGG | - | chr3.1:83254024-83254043 | None:intergenic | 35.0% | |
| TATGGTTGTGATAGAGAAAC+AGG | - | chr3.1:83258363-83258382 | None:intergenic | 35.0% | |
| TCACAGTGCAAGAAAATAGT+TGG | - | chr3.1:83257120-83257139 | None:intergenic | 35.0% | |
| TCAGTAATTCATTAGAGTCC+AGG | + | chr3.1:83253612-83253631 | MS.gene32740:CDS | 35.0% | |
| TGAGACGAAACAATCTTGAT+AGG | + | chr3.1:83254066-83254085 | MS.gene32740:intron | 35.0% | |
| TGGTAATACTGTCCAATTAC+AGG | + | chr3.1:83258057-83258076 | MS.gene32740:intron | 35.0% | |
| TTCAATCTGTGTCATCTTCT+CGG | + | chr3.1:83255770-83255789 | MS.gene32740:intron | 35.0% | |
| TTCGTTTCATTTCGTTCTAC+AGG | - | chr3.1:83255153-83255172 | None:intergenic | 35.0% | |
| TTTCATTTCGTTCTACAGGA+GGG | - | chr3.1:83255149-83255168 | None:intergenic | 35.0% | |
| ! | ACATAAAAAGCACACACAAG+GGG | - | chr3.1:83258107-83258126 | None:intergenic | 35.0% |
| ! | ATTCCTTATTTCCGGAAAAG+GGG | + | chr3.1:83255442-83255461 | MS.gene32740:intron | 35.0% |
| ! | CATTGATCTTTTACAGCAAG+TGG | - | chr3.1:83254570-83254589 | None:intergenic | 35.0% |
| ! | CATTGCATAGCATCAGTTTT+AGG | + | chr3.1:83254419-83254438 | MS.gene32740:intron | 35.0% |
| ! | GATTCCTTATTTCCGGAAAA+GGG | + | chr3.1:83255441-83255460 | MS.gene32740:intron | 35.0% |
| ! | GTCAGTTCTAGTGAAACAAT+GGG | - | chr3.1:83256713-83256732 | None:intergenic | 35.0% |
| ! | TAATACTAATAGGGGCACAA+AGG | + | chr3.1:83259121-83259140 | MS.gene32740:intron | 35.0% |
| ! | TGATTCCTTATTTCCGGAAA+AGG | + | chr3.1:83255440-83255459 | MS.gene32740:intron | 35.0% |
| ! | TTGACTCGAGAAAACATGTT+TGG | - | chr3.1:83257063-83257082 | None:intergenic | 35.0% |
| !! | AAAAAAAGCTTTGGATTCGG+AGG | + | chr3.1:83253649-83253668 | MS.gene32740:CDS | 35.0% |
| !! | TACCAGCTATTTCAACCTTT+TGG | - | chr3.1:83256566-83256585 | None:intergenic | 35.0% |
| !! | TGTATTACAGCCTCTTGTTT+TGG | - | chr3.1:83257830-83257849 | None:intergenic | 35.0% |
| !! | TTCTGGTTTCTAATCCTTCT+AGG | - | chr3.1:83255006-83255025 | None:intergenic | 35.0% |
| !!! | ACAGTTTAGTTTTGGACAAG+TGG | + | chr3.1:83256073-83256092 | MS.gene32740:intron | 35.0% |
| !!! | CGAATCCAAAGCTTTTTTTC+TGG | - | chr3.1:83253648-83253667 | None:intergenic | 35.0% |
| !!! | TGCCCTATCTTTTTTTGATG+TGG | + | chr3.1:83255611-83255630 | MS.gene32740:intron | 35.0% |
| !!! | TTTGTTGGTTTTGGGTTTCT+TGG | - | chr3.1:83253435-83253454 | None:intergenic | 35.0% |
| AAAACTCCCCTGTTGTTGAA+TGG | + | chr3.1:83254283-83254302 | MS.gene32740:CDS | 40.0% | |
| AAACAAACTTACGGTCCATG+TGG | - | chr3.1:83255734-83255753 | None:intergenic | 40.0% | |
| AACATGGGTATAACTGCACT+TGG | + | chr3.1:83254874-83254893 | MS.gene32740:CDS | 40.0% | |
| AACGACTGTCTCGATAAATC+TGG | + | chr3.1:83253767-83253786 | MS.gene32740:CDS | 40.0% | |
| AAGCTGTAAAACTGCTTAGC+AGG | - | chr3.1:83258583-83258602 | None:intergenic | 40.0% | |
| AAGTTCAAGCGAGAAACATG+AGG | + | chr3.1:83254966-83254985 | MS.gene32740:CDS | 40.0% | |
| ACACACAATGATGAGAAGTG+GGG | + | chr3.1:83253983-83254002 | MS.gene32740:intron | 40.0% | |
| ACACACACAATGATGAGAAG+TGG | + | chr3.1:83253981-83254000 | MS.gene32740:intron | 40.0% | |
| AGAAAAGTTTACCAGCTACC+TGG | + | chr3.1:83255494-83255513 | MS.gene32740:intron | 40.0% | |
| AGACAATTCGAAAGAGAGAG+TGG | + | chr3.1:83256118-83256137 | MS.gene32740:intron | 40.0% | |
| AGATTCGCGACATTCCTAAA+TGG | + | chr3.1:83255229-83255248 | MS.gene32740:CDS | 40.0% | |
| AGATTTGGCAGTTGTGTTTG+TGG | + | chr3.1:83258037-83258056 | MS.gene32740:intron | 40.0% | |
| ATATCGTAACCTTCAGAAGG+GGG | - | chr3.1:83253488-83253507 | None:intergenic | 40.0% | |
| ATATTCATGTTGCCCCTATG+TGG | + | chr3.1:83258276-83258295 | MS.gene32740:CDS | 40.0% | |
| ATCTAGGCAGTACTTCATAC+GGG | + | chr3.1:83256755-83256774 | MS.gene32740:intron | 40.0% | |
| ATGTTCTCTTTACCAGGGAA+CGG | - | chr3.1:83253464-83253483 | None:intergenic | 40.0% | |
| ATTACTCGACTCAACTAGGT+TGG | - | chr3.1:83254601-83254620 | None:intergenic | 40.0% | |
| CACACACAATGATGAGAAGT+GGG | + | chr3.1:83253982-83254001 | MS.gene32740:intron | 40.0% | |
| CATGAGAGAAACCATTGCAT+CGG | - | chr3.1:83259334-83259353 | None:intergenic | 40.0% | |
| CATGTTGCAATTTGCCTTTC+TGG | - | chr3.1:83255023-83255042 | None:intergenic | 40.0% | |
| CCAAAGCAAACACTTGATAC+AGG | - | chr3.1:83256932-83256951 | None:intergenic | 40.0% | |
| CCAACAGCCAAAGTACAAAT+TGG | - | chr3.1:83256403-83256422 | None:intergenic | 40.0% | |
| CCAATTTGTACTTTGGCTGT+TGG | + | chr3.1:83256400-83256419 | MS.gene32740:intron | 40.0% | |
| CCAGAAGTAGAGAGAAAGAA+AGG | - | chr3.1:83259058-83259077 | None:intergenic | 40.0% | |
| CCATGTATCCATTCAACAAC+AGG | - | chr3.1:83254294-83254313 | None:intergenic | 40.0% | |
| CCTGTATCAAGTGTTTGCTT+TGG | + | chr3.1:83256929-83256948 | MS.gene32740:intron | 40.0% | |
| CCTGTTGTTGAATGGATACA+TGG | + | chr3.1:83254291-83254310 | MS.gene32740:CDS | 40.0% | |
| CCTTTCTTTCTCTCTACTTC+TGG | + | chr3.1:83259055-83259074 | MS.gene32740:intron | 40.0% | |
| CGAAACAGAAGAGGAACAAA+CGG | - | chr3.1:83253561-83253580 | None:intergenic | 40.0% | |
| CGAAATGAAACGAACACAAG+TGG | + | chr3.1:83255159-83255178 | MS.gene32740:CDS | 40.0% | |
| CGATATCGTAACCTTCAGAA+GGG | - | chr3.1:83253490-83253509 | None:intergenic | 40.0% | |
| CGTTTGTTCCTCTTCTGTTT+CGG | + | chr3.1:83253559-83253578 | MS.gene32740:CDS | 40.0% | |
| CTAATAAGGAGCTAAACACC+TGG | - | chr3.1:83256359-83256378 | None:intergenic | 40.0% | |
| CTCACCAAGTCATTCAATCA+TGG | + | chr3.1:83256453-83256472 | MS.gene32740:CDS | 40.0% | |
| CTCATTGGCAGCTATACAAT+TGG | + | chr3.1:83257902-83257921 | MS.gene32740:CDS | 40.0% | |
| CTTGTTCAGAATGCTACTCT+AGG | - | chr3.1:83254639-83254658 | None:intergenic | 40.0% | |
| CTTTGAACCTCCAAATGGTA+AGG | + | chr3.1:83256638-83256657 | MS.gene32740:CDS | 40.0% | |
| GAAATATCAACACCACAGAG+AGG | - | chr3.1:83253713-83253732 | None:intergenic | 40.0% | |
| GAAGTAGAGAGAAAGAAAGG+AGG | - | chr3.1:83259055-83259074 | None:intergenic | 40.0% | |
| GAAGTGAGTGTGATCTGAAT+CGG | - | chr3.1:83253309-83253328 | None:intergenic | 40.0% | |
| GAGAGACATTTCATGCAAAC+AGG | - | chr3.1:83254767-83254786 | None:intergenic | 40.0% | |
| GATATCGTAACCTTCAGAAG+GGG | - | chr3.1:83253489-83253508 | None:intergenic | 40.0% | |
| GGTCCATCATTATTCACACT+TGG | - | chr3.1:83259303-83259322 | None:intergenic | 40.0% | |
| GTGAATTTGTGTGACGAGTT+TGG | + | chr3.1:83253671-83253690 | MS.gene32740:CDS | 40.0% | |
| GTTGAATGGATACATGGTCT+CGG | + | chr3.1:83254297-83254316 | MS.gene32740:CDS | 40.0% | |
| GTTTCATTTCGTTCTACAGG+AGG | - | chr3.1:83255150-83255169 | None:intergenic | 40.0% | |
| TCAAAGTCAGACATGCACAT+TGG | - | chr3.1:83257314-83257333 | None:intergenic | 40.0% | |
| TCATATGTGGACTTACCTGT+GGG | - | chr3.1:83256871-83256890 | None:intergenic | 40.0% | |
| TGACTATTGGATTGTGAGAG+AGG | - | chr3.1:83253398-83253417 | None:intergenic | 40.0% | |
| TGCCAATGAGAAAAAGAGTC+CGG | - | chr3.1:83257892-83257911 | None:intergenic | 40.0% | |
| TGCGTCCAGAAAAAAAGCTT+TGG | + | chr3.1:83253640-83253659 | MS.gene32740:CDS | 40.0% | |
| TGGCAAACAATCCTTTACTG+CGG | + | chr3.1:83256801-83256820 | MS.gene32740:CDS | 40.0% | |
| TGGTCGTTGGATTTGACTAT+TGG | - | chr3.1:83253411-83253430 | None:intergenic | 40.0% | |
| TGTGAGAGAGGTTTGAGAAT+TGG | - | chr3.1:83253386-83253405 | None:intergenic | 40.0% | |
| TGTGTGTGAGTTTCATCACT+AGG | - | chr3.1:83253968-83253987 | None:intergenic | 40.0% | |
| TTCATATGTGGACTTACCTG+TGG | - | chr3.1:83256872-83256891 | None:intergenic | 40.0% | |
| TTCATTTCGTTCTACAGGAG+GGG | - | chr3.1:83255148-83255167 | None:intergenic | 40.0% | |
| TTCTTGTAAATAGGACCGGA+GGG | + | chr3.1:83258973-83258992 | MS.gene32740:intron | 40.0% | |
| TTGAATGGATACATGGTCTC+GGG | + | chr3.1:83254298-83254317 | MS.gene32740:CDS | 40.0% | |
| TTGATTGGGATACCTTGCAA+TGG | + | chr3.1:83254358-83254377 | MS.gene32740:CDS | 40.0% | |
| TTTCTCGCTTGAACTTGAAG+AGG | - | chr3.1:83254962-83254981 | None:intergenic | 40.0% | |
| TTTCTTGTAAATAGGACCGG+AGG | + | chr3.1:83258972-83258991 | MS.gene32740:intron | 40.0% | |
| ! | AAGCAGAAGCTTTTAATCCC+CGG | + | chr3.1:83257870-83257889 | MS.gene32740:CDS | 40.0% |
| ! | AATGCCTTGTTGGCTGATAA+AGG | + | chr3.1:83258534-83258553 | MS.gene32740:intron | 40.0% |
| ! | ATAGTTGCTTTCTCTCCTAC+TGG | + | chr3.1:83258709-83258728 | MS.gene32740:CDS | 40.0% |
| ! | ATGTTTGGAGTTTACAGAGG+AGG | + | chr3.1:83258217-83258236 | MS.gene32740:CDS | 40.0% |
| ! | CAACTGTTTGTTAGAGGCAT+TGG | + | chr3.1:83257080-83257099 | MS.gene32740:intron | 40.0% |
| ! | CCTTCTGAAGGTTACGATAT+CGG | + | chr3.1:83253488-83253507 | MS.gene32740:CDS | 40.0% |
| ! | CGTTAGGGAAGAAGTTGATT+GGG | + | chr3.1:83254344-83254363 | MS.gene32740:CDS | 40.0% |
| ! | CTGCTGTCACATACACTTTT+TGG | - | chr3.1:83258178-83258197 | None:intergenic | 40.0% |
| ! | GCTGGTAAACTTTTCTTGAC+TGG | - | chr3.1:83255490-83255509 | None:intergenic | 40.0% |
| ! | GGTCAGTTCTAGTGAAACAA+TGG | - | chr3.1:83256714-83256733 | None:intergenic | 40.0% |
| ! | TCAACAACAGGGGAGTTTTT+CGG | - | chr3.1:83254282-83254301 | None:intergenic | 40.0% |
| ! | TCGAGTCAACTGTTTGTTAG+AGG | + | chr3.1:83257074-83257093 | MS.gene32740:intron | 40.0% |
| ! | TCGTTAGGGAAGAAGTTGAT+TGG | + | chr3.1:83254343-83254362 | MS.gene32740:CDS | 40.0% |
| ! | TTCCTTATTTCCGGAAAAGG+GGG | + | chr3.1:83255443-83255462 | MS.gene32740:intron | 40.0% |
| ! | TTGCTTTGCTTCGTTGGTAA+AGG | + | chr3.1:83254788-83254807 | MS.gene32740:intron | 40.0% |
| !! | AGAAAGGAGGCATGTTTTGA+AGG | - | chr3.1:83259042-83259061 | None:intergenic | 40.0% |
| !! | AGACACAGAAAGGCATTCAT+TGG | - | chr3.1:83255814-83255833 | None:intergenic | 40.0% |
| !! | CATCATGAATGTTGACTCCA+CGG | - | chr3.1:83254189-83254208 | None:intergenic | 40.0% |
| !! | GACACAGAAAGGCATTCATT+GGG | - | chr3.1:83255813-83255832 | None:intergenic | 40.0% |
| !! | TATCAGCCAACAAGGCATTT+TGG | - | chr3.1:83258533-83258552 | None:intergenic | 40.0% |
| !! | TGAGCGAAAAGTTGATGGAA+CGG | + | chr3.1:83255050-83255069 | MS.gene32740:CDS | 40.0% |
| !!! | GGTGTCGTTTTGTTGGTTTT+GGG | - | chr3.1:83253443-83253462 | None:intergenic | 40.0% |
| !!! | TGTTTTGAAGGATGCAATGC+AGG | - | chr3.1:83259030-83259049 | None:intergenic | 40.0% |
| !!! | TTGGTTTTGGGTTTCTTGGA+TGG | - | chr3.1:83253431-83253450 | None:intergenic | 40.0% |
| AAAAGAAGTCTCCCGGAAGA+AGG | + | chr3.1:83258752-83258771 | MS.gene32740:CDS | 45.0% | |
| AACAGAAGAGGAACAAACGG+TGG | - | chr3.1:83253558-83253577 | None:intergenic | 45.0% | |
| AACCTCCAAATGGTAAGGTG+AGG | + | chr3.1:83256643-83256662 | MS.gene32740:intron | 45.0% | |
| AACTGCTTAGCAGGTAAACC+AGG | - | chr3.1:83258574-83258593 | None:intergenic | 45.0% | |
| AAGCTGCAATGCTCACTGTA+AGG | - | chr3.1:83259231-83259250 | None:intergenic | 45.0% | |
| AAGCTTGCAAGTGTCCACAT+AGG | - | chr3.1:83258293-83258312 | None:intergenic | 45.0% | |
| AAGTTTACCAGCTACCTGGA+TGG | + | chr3.1:83255498-83255517 | MS.gene32740:intron | 45.0% | |
| ACGATGTGGGAGCTCAATTT+GGG | + | chr3.1:83254256-83254275 | MS.gene32740:CDS | 45.0% | |
| ACTGGTTGGACATTTGGCAA+AGG | + | chr3.1:83258727-83258746 | MS.gene32740:CDS | 45.0% | |
| ACTTGAAGAGGAGGTTCCTA+AGG | - | chr3.1:83254950-83254969 | None:intergenic | 45.0% | |
| AGCTTGCAAGTGTCCACATA+GGG | - | chr3.1:83258292-83258311 | None:intergenic | 45.0% | |
| AGTGGGAACAATCTCCTCTT+AGG | - | chr3.1:83255695-83255714 | None:intergenic | 45.0% | |
| ATAGGACATGTCCGCAGTAA+AGG | - | chr3.1:83256815-83256834 | None:intergenic | 45.0% | |
| CCAATGAGAAAAAGAGTCCG+GGG | - | chr3.1:83257890-83257909 | None:intergenic | 45.0% | |
| CCGATATCGTAACCTTCAGA+AGG | - | chr3.1:83253491-83253510 | None:intergenic | 45.0% | |
| CCTAAATGGTGTGCCATACA+AGG | + | chr3.1:83255243-83255262 | MS.gene32740:CDS | 45.0% | |
| CCTTGTATGGCACACCATTT+AGG | - | chr3.1:83255246-83255265 | None:intergenic | 45.0% | |
| CGTGGAGTCAACATTCATGA+TGG | + | chr3.1:83254187-83254206 | MS.gene32740:intron | 45.0% | |
| CTCAGTTTGAATTGCCATCC+AGG | - | chr3.1:83255515-83255534 | None:intergenic | 45.0% | |
| CTCTCTTTGCTTTGCTTCGT+TGG | + | chr3.1:83254782-83254801 | MS.gene32740:intron | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | - | chr3.1:83258856-83258875 | None:intergenic | 45.0% | |
| CTTAGAAGAGGAATCGCCTT+AGG | + | chr3.1:83254931-83254950 | MS.gene32740:CDS | 45.0% | |
| GAAGGTTACGATATCGGTCA+CGG | + | chr3.1:83253494-83253513 | MS.gene32740:CDS | 45.0% | |
| GAAGTGTGTGAGAAACCAGT+GGG | - | chr3.1:83255712-83255731 | None:intergenic | 45.0% | |
| GCCAATGAGAAAAAGAGTCC+GGG | - | chr3.1:83257891-83257910 | None:intergenic | 45.0% | |
| GCTCTCTCAGAACTTAGAAG+AGG | + | chr3.1:83254919-83254938 | MS.gene32740:CDS | 45.0% | |
| GGATCCTTTATCAGCCAACA+AGG | - | chr3.1:83258541-83258560 | None:intergenic | 45.0% | |
| GGGGAATGTTCTCTTTACCA+GGG | - | chr3.1:83253469-83253488 | None:intergenic | 45.0% | |
| GGTGATTGAGTTTGAGTGAG+AGG | - | chr3.1:83253365-83253384 | None:intergenic | 45.0% | |
| GTTTCTCACACACTTCCACA+TGG | + | chr3.1:83255716-83255735 | MS.gene32740:CDS | 45.0% | |
| TAAGAGGAGATTGTTCCCAC+TGG | + | chr3.1:83255694-83255713 | MS.gene32740:CDS | 45.0% | |
| TACAAGTCTGGCTGTAACAG+AGG | - | chr3.1:83256493-83256512 | None:intergenic | 45.0% | |
| TATGGAACCTGGACAATGGT+TGG | - | chr3.1:83256610-83256629 | None:intergenic | 45.0% | |
| TCAACCATAAGTACTCCCTC+CGG | - | chr3.1:83258991-83259010 | None:intergenic | 45.0% | |
| TCCATGCCAAAATGCCTTGT+TGG | + | chr3.1:83258524-83258543 | MS.gene32740:intron | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | - | chr3.1:83258857-83258876 | None:intergenic | 45.0% | |
| TGATGAGAAGTGGGGAATTG+CGG | + | chr3.1:83253991-83254010 | MS.gene32740:intron | 45.0% | |
| TTACAGAGGAGGATATGCAG+TGG | + | chr3.1:83258228-83258247 | MS.gene32740:CDS | 45.0% | |
| TTGCCAAATGTCCAACCAGT+AGG | - | chr3.1:83258727-83258746 | None:intergenic | 45.0% | |
| TTGCTTTCTCTCCTACTGGT+TGG | + | chr3.1:83258713-83258732 | MS.gene32740:CDS | 45.0% | |
| TTTCACTAGAACTGACCAGC+TGG | + | chr3.1:83256717-83256736 | MS.gene32740:intron | 45.0% | |
| TTTCAGCTCCGAAACAGAAG+AGG | - | chr3.1:83253570-83253589 | None:intergenic | 45.0% | |
| ! | AACCCCCTTTTCCGGAAATA+AGG | - | chr3.1:83255448-83255467 | None:intergenic | 45.0% |
| ! | ATGTTGCTTACCACTCGGAA+AGG | - | chr3.1:83255273-83255292 | None:intergenic | 45.0% |
| ! | CACATGAAAACCCCCTTTTC+CGG | - | chr3.1:83255456-83255475 | None:intergenic | 45.0% |
| ! | GGAAAAGGGGGTTTTCATGT+GGG | + | chr3.1:83255455-83255474 | MS.gene32740:intron | 45.0% |
| ! | TCTCCTACTGGTTGGACATT+TGG | + | chr3.1:83258721-83258740 | MS.gene32740:CDS | 45.0% |
| ! | TTTTCTGGACGCAACTAACC+TGG | - | chr3.1:83253633-83253652 | None:intergenic | 45.0% |
| !! | TACCTTTAGCTGTTTGGTGC+CGG | + | chr3.1:83256211-83256230 | MS.gene32740:intron | 45.0% |
| !! | TCGGAAAGGTGTTCCTTGTA+TGG | - | chr3.1:83255259-83255278 | None:intergenic | 45.0% |
| !! | TGGTATTGGCGTGACTTGTT+TGG | + | chr3.1:83256581-83256600 | MS.gene32740:CDS | 45.0% |
| !!! | CGGTGTCGTTTTGTTGGTTT+TGG | - | chr3.1:83253444-83253463 | None:intergenic | 45.0% |
| !!! | GGCAGAAACTTTTTTCCCAC+TGG | - | chr3.1:83255127-83255146 | None:intergenic | 45.0% |
| !! | ATATATATATATATATAGTT+TGG | + | chr3.1:83255894-83255913 | MS.gene32740:intron | 5.0% |
| AACAAAACGACACCGTTCCC+TGG | + | chr3.1:83253449-83253468 | MS.gene32740:CDS | 50.0% | |
| AAGGATCCACAGTTGCTACC+TGG | + | chr3.1:83258553-83258572 | MS.gene32740:intron | 50.0% | |
| ACAAGGAACACCTTTCCGAG+TGG | + | chr3.1:83255260-83255279 | MS.gene32740:CDS | 50.0% | |
| ACCAGAATCTGCCGATGCAA+TGG | + | chr3.1:83259320-83259339 | MS.gene32740:CDS | 50.0% | |
| AGACATGCACATTGGCACTC+TGG | - | chr3.1:83257306-83257325 | None:intergenic | 50.0% | |
| AGCCTCACCTTACCATTTGG+AGG | - | chr3.1:83256648-83256667 | None:intergenic | 50.0% | |
| ATGCTGAGGTTGAGCCTAGA+AGG | + | chr3.1:83254989-83255008 | MS.gene32740:CDS | 50.0% | |
| CCAAATGGTAAGGTGAGGCT+TGG | + | chr3.1:83256648-83256667 | MS.gene32740:intron | 50.0% | |
| CCAAGCCTCACCTTACCATT+TGG | - | chr3.1:83256651-83256670 | None:intergenic | 50.0% | |
| CGAGAAACATGAGGATGCTG+AGG | + | chr3.1:83254975-83254994 | MS.gene32740:CDS | 50.0% | |
| CTCGCTTGAACTTGAAGAGG+AGG | - | chr3.1:83254959-83254978 | None:intergenic | 50.0% | |
| CTCTTCTGTCAGCCATTGCA+AGG | - | chr3.1:83254373-83254392 | None:intergenic | 50.0% | |
| CTTGCAATGGCTGACAGAAG+AGG | + | chr3.1:83254371-83254390 | MS.gene32740:CDS | 50.0% | |
| GACGATGTGGGAGCTCAATT+TGG | + | chr3.1:83254255-83254274 | MS.gene32740:CDS | 50.0% | |
| GAGAACATTCCCCCTTCTGA+AGG | + | chr3.1:83253476-83253495 | MS.gene32740:CDS | 50.0% | |
| GATGAGAAGTGGGGAATTGC+GGG | + | chr3.1:83253992-83254011 | MS.gene32740:intron | 50.0% | |
| GCTTGCAAGTGTCCACATAG+GGG | - | chr3.1:83258291-83258310 | None:intergenic | 50.0% | |
| GGGGGAATGTTCTCTTTACC+AGG | - | chr3.1:83253470-83253489 | None:intergenic | 50.0% | |
| GGTAAACCAGGTAGCAACTG+TGG | - | chr3.1:83258562-83258581 | None:intergenic | 50.0% | |
| GTGCCTCCTAATGACGATGT+GGG | + | chr3.1:83254243-83254262 | MS.gene32740:CDS | 50.0% | |
| TGAATTGCCATCCAGGTAGC+TGG | - | chr3.1:83255508-83255527 | None:intergenic | 50.0% | |
| TGAGCTCCCACATCGTCATT+AGG | - | chr3.1:83254252-83254271 | None:intergenic | 50.0% | |
| TGGGTTTCTTGGATGGTCGT+TGG | - | chr3.1:83253424-83253443 | None:intergenic | 50.0% | |
| TGTGCCTCCTAATGACGATG+TGG | + | chr3.1:83254242-83254261 | MS.gene32740:CDS | 50.0% | |
| TTCCCACTGGTAGCAAATCC+CGG | - | chr3.1:83255114-83255133 | None:intergenic | 50.0% | |
| TTGGATGCCAACCATTGTCC+AGG | + | chr3.1:83256600-83256619 | MS.gene32740:CDS | 50.0% | |
| ! | ACCATTGCATCGGCAGATTC+TGG | - | chr3.1:83259324-83259343 | None:intergenic | 50.0% |
| ! | CCCCGGACTCTTTTTCTCAT+TGG | + | chr3.1:83257887-83257906 | MS.gene32740:CDS | 50.0% |
| ! | CGGAAAAGGGGGTTTTCATG+TGG | + | chr3.1:83255454-83255473 | MS.gene32740:intron | 50.0% |
| ! | GGAAGTGTGTGAGAAACCAG+TGG | - | chr3.1:83255713-83255732 | None:intergenic | 50.0% |
| ! | GGCAGCAGGGTACCATTATA+AGG | + | chr3.1:83258776-83258795 | MS.gene32740:CDS | 50.0% |
| ! | TACCTGTGGGTTGCAGTATG+TGG | - | chr3.1:83256858-83256877 | None:intergenic | 50.0% |
| ! | TCTGTTGATTGCCCTCTCTG+TGG | + | chr3.1:83253698-83253717 | MS.gene32740:CDS | 50.0% |
| !! | GCCAACAAGGCATTTTGGCA+TGG | - | chr3.1:83258528-83258547 | None:intergenic | 50.0% |
| !! | TTCCGGGATTTGCTACCAGT+GGG | + | chr3.1:83255109-83255128 | MS.gene32740:CDS | 50.0% |
| !! | TTTCCGGGATTTGCTACCAG+TGG | + | chr3.1:83255108-83255127 | MS.gene32740:CDS | 50.0% |
| !!! | AGGGAACGGTGTCGTTTTGT+TGG | - | chr3.1:83253450-83253469 | None:intergenic | 50.0% |
| !!! | TAATTTTCGGGTAGGGGAGC+CGG | - | chr3.1:83256233-83256252 | None:intergenic | 50.0% |
| AGAAGTCTCCCGGAAGAAGG+TGG | + | chr3.1:83258755-83258774 | MS.gene32740:CDS | 55.0% | |
| AGAGTGGCAGTGCTGTGCAT+CGG | + | chr3.1:83256134-83256153 | MS.gene32740:intron | 55.0% | |
| AGCCGGCACCAAACAGCTAA+AGG | - | chr3.1:83256216-83256235 | None:intergenic | 55.0% | |
| CACCACATACTGCAACCCAC+AGG | + | chr3.1:83256853-83256872 | MS.gene32740:CDS | 55.0% | |
| GCTCCCACATCGTCATTAGG+AGG | - | chr3.1:83254249-83254268 | None:intergenic | 55.0% | |
| ! | CGACTCAACTAGGTTGGCCA+TGG | - | chr3.1:83254595-83254614 | None:intergenic | 55.0% |
| ! | GAGGTTGTGTGATTTGGCCG+TGG | + | chr3.1:83254169-83254188 | MS.gene32740:intron | 55.0% |
| !! | AGGACCGGAGGGAGTACTTA+TGG | + | chr3.1:83258984-83259003 | MS.gene32740:intron | 55.0% |
| ACCCTGCTGCCACCTTCTTC+CGG | - | chr3.1:83258767-83258786 | None:intergenic | 60.0% | |
| CCCGGAAGAAGGTGGCAGCA+GGG | + | chr3.1:83258763-83258782 | MS.gene32740:CDS | 65.0% | |
| CCCTGCTGCCACCTTCTTCC+GGG | - | chr3.1:83258766-83258785 | None:intergenic | 65.0% | |
| TCCCGGAAGAAGGTGGCAGC+AGG | + | chr3.1:83258762-83258781 | MS.gene32740:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83253302 | 83259362 | 83253302 | ID=MS.gene32740 |
| chr3.1 | mRNA | 83253302 | 83259362 | 83253302 | ID=MS.gene32740.t1;Parent=MS.gene32740 |
| chr3.1 | exon | 83253302 | 83253796 | 83253302 | ID=MS.gene32740.t1.exon1;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83253302 | 83253796 | 83253302 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83254240 | 83254392 | 83254240 | ID=MS.gene32740.t1.exon2;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83254240 | 83254392 | 83254240 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83254865 | 83255281 | 83254865 | ID=MS.gene32740.t1.exon3;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83254865 | 83255281 | 83254865 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83255678 | 83255741 | 83255678 | ID=MS.gene32740.t1.exon4;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83255678 | 83255741 | 83255678 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83256442 | 83256659 | 83256442 | ID=MS.gene32740.t1.exon5;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83256442 | 83256659 | 83256442 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83256761 | 83256874 | 83256761 | ID=MS.gene32740.t1.exon6;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83256761 | 83256874 | 83256761 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83257818 | 83257923 | 83257818 | ID=MS.gene32740.t1.exon7;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83257818 | 83257923 | 83257818 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83258135 | 83258346 | 83258135 | ID=MS.gene32740.t1.exon8;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83258135 | 83258346 | 83258135 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83258694 | 83258797 | 83258694 | ID=MS.gene32740.t1.exon9;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83258694 | 83258797 | 83258694 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| chr3.1 | exon | 83259218 | 83259362 | 83259218 | ID=MS.gene32740.t1.exon10;Parent=MS.gene32740.t1 |
| chr3.1 | CDS | 83259218 | 83259362 | 83259218 | ID=cds.MS.gene32740.t1;Parent=MS.gene32740.t1 |
| Gene Sequence |
| Protein sequence |
