AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35599

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35599.t1 MTR_3g074390 78.125 512 107 1 1 507 1 512 0.0 834
MS.gene35599.t1 MTR_3g074410 76.621 509 117 1 1 507 1 509 0.0 812
MS.gene35599.t1 MTR_3g074270 67.936 499 139 2 1 499 1 478 0.0 700
MS.gene35599.t1 MTR_3g074340 96.273 322 12 0 186 507 19 340 0.0 632
MS.gene35599.t1 MTR_3g074370 95.963 322 13 0 186 507 19 340 0.0 629
MS.gene35599.t1 MTR_3g074320 95.342 322 15 0 186 507 19 340 0.0 627
MS.gene35599.t1 MTR_3g074380 77.596 366 79 2 1 363 1 366 0.0 583
MS.gene35599.t1 MTR_3g008160 51.697 501 232 7 8 502 6 502 0.0 535
MS.gene35599.t1 MTR_3g008170 52.157 510 228 7 5 501 4 510 0.0 521
MS.gene35599.t1 MTR_5g006070 49.899 495 238 7 15 503 14 504 2.12e-177 509
MS.gene35599.t1 MTR_0204s0020 48.866 485 243 4 12 495 10 490 9.20e-175 501
MS.gene35599.t1 MTR_5g041550 51.176 510 242 5 1 505 1 508 3.95e-174 500
MS.gene35599.t1 MTR_3g074400 59.161 453 131 6 50 481 1 420 2.72e-172 492
MS.gene35599.t1 MTR_0009s0370 49.301 501 246 6 8 503 7 504 6.40e-171 492
MS.gene35599.t1 MTR_0204s0020 48.247 485 243 5 12 495 10 487 1.41e-170 490
MS.gene35599.t1 MTR_3g093010 51.282 507 240 5 4 505 3 507 2.36e-170 491
MS.gene35599.t1 MTR_3g008160 50.985 457 216 6 50 502 1 453 4.69e-169 485
MS.gene35599.t1 MTR_1g038630 47.515 503 260 3 1 501 1 501 2.69e-168 485
MS.gene35599.t1 MTR_5g082540 47.984 496 252 4 10 501 8 501 2.08e-167 483
MS.gene35599.t1 MTR_7g091690 48.497 499 248 5 1 494 1 495 7.55e-167 481
MS.gene35599.t1 MTR_5g094760 48.898 499 246 5 1 494 1 495 3.32e-166 480
MS.gene35599.t1 MTR_4g116790 46.016 502 266 4 3 503 7 504 3.97e-166 480
MS.gene35599.t1 MTR_0204s0040 46.045 493 261 4 3 494 9 497 2.08e-164 475
MS.gene35599.t1 MTR_4g091370 52.664 488 225 5 15 498 15 500 2.02e-163 473
MS.gene35599.t1 MTR_1g104750 46.322 503 261 7 1 498 1 499 8.00e-163 471
MS.gene35599.t1 MTR_3g023480 47.887 497 252 5 15 506 13 507 1.05e-161 469
MS.gene35599.t1 MTR_4g116770 46.045 493 261 4 3 494 205 693 1.08e-161 475
MS.gene35599.t1 MTR_1g104770 45.328 503 267 6 1 498 1 500 2.22e-160 465
MS.gene35599.t1 MTR_5g006070 48.913 460 225 7 50 503 1 456 3.81e-160 463
MS.gene35599.t1 MTR_1g104780 47.431 506 255 8 1 500 1 501 9.06e-160 464
MS.gene35599.t1 MTR_3g007910 48.594 498 221 7 4 498 3 468 1.73e-157 457
MS.gene35599.t1 MTR_4g090600 51.378 508 237 6 7 506 3 508 2.03e-155 452
MS.gene35599.t1 MTR_1g038600 45.309 501 256 4 1 501 1 483 5.86e-154 448
MS.gene35599.t1 MTR_3g093060 50.552 453 216 5 50 496 1 451 2.31e-153 445
MS.gene35599.t1 MTR_6g087040 45.850 506 264 8 1 500 1 502 5.72e-153 446
MS.gene35599.t1 MTR_6g088375 45.850 506 264 8 1 500 1 502 5.72e-153 446
MS.gene35599.t1 MTR_8g102860 45.142 494 264 6 15 505 18 507 6.25e-152 444
MS.gene35599.t1 MTR_8g102860 45.098 459 245 6 50 505 1 455 2.24e-139 410
MS.gene35599.t1 MTR_4g116790 44.875 361 196 3 3 362 7 365 1.56e-110 333
MS.gene35599.t1 MTR_3g074330 92.405 158 5 1 1 151 1 158 2.20e-93 281
MS.gene35599.t1 MTR_3g074360 92.405 158 5 1 1 151 1 158 2.20e-93 281
MS.gene35599.t1 MTR_3g074310 91.772 158 6 1 1 151 1 158 1.33e-92 280
MS.gene35599.t1 MTR_4g069500 30.739 501 299 10 27 505 34 508 3.71e-60 206
MS.gene35599.t1 MTR_4g069500 32.569 436 265 8 92 505 30 458 2.37e-59 203
MS.gene35599.t1 MTR_4g072030 30.658 486 291 9 27 491 31 491 5.80e-59 203
MS.gene35599.t1 MTR_8g077890 31.365 491 280 13 28 490 24 485 2.65e-57 198
MS.gene35599.t1 MTR_3g116240 31.070 486 288 12 27 489 32 493 1.09e-56 197
MS.gene35599.t1 MTR_6g088450 31.545 466 275 12 28 477 63 500 3.78e-56 196
MS.gene35599.t1 MTR_8g103500 28.024 496 310 10 12 487 3 471 9.94e-55 191
MS.gene35599.t1 MTR_2g013310 28.903 474 301 8 24 487 53 500 2.21e-51 183
MS.gene35599.t1 MTR_2g013310 29.829 409 271 5 88 487 26 427 1.83e-50 179
MS.gene35599.t1 MTR_5g075300 29.796 490 289 12 28 490 24 485 4.99e-49 176
MS.gene35599.t1 MTR_7g446340 27.105 487 315 10 20 494 51 509 9.88e-48 173
MS.gene35599.t1 MTR_6g007340 27.105 487 315 10 20 494 51 509 9.88e-48 173
MS.gene35599.t1 MTR_5g096000 51.685 178 68 1 4 181 3 162 2.66e-47 166
MS.gene35599.t1 MTR_5g096000 51.515 132 63 1 368 498 168 299 1.57e-33 129
MS.gene35599.t1 MTR_4g077740 28.601 479 299 12 22 483 44 496 4.38e-44 162
MS.gene35599.t1 MTR_7g094450 28.747 407 274 5 79 483 77 469 5.00e-44 162
MS.gene35599.t1 MTR_8g077300 27.764 407 277 4 82 483 79 473 5.87e-44 162
MS.gene35599.t1 MTR_8g077310 27.861 402 283 2 82 483 87 481 3.87e-43 160
MS.gene35599.t1 MTR_8g077310 27.621 391 276 2 93 483 1 384 1.47e-42 156
MS.gene35599.t1 MTR_3g084110 25.625 480 321 10 34 506 39 489 3.37e-40 152
MS.gene35599.t1 MTR_7g094110 28.218 404 274 6 82 483 82 471 4.21e-40 151
MS.gene35599.t1 MTR_1g116660 26.634 413 286 8 102 506 98 501 6.66e-40 151
MS.gene35599.t1 MTR_7g005910 27.505 469 308 10 29 490 39 482 1.92e-39 150
MS.gene35599.t1 MTR_7g082270 26.305 479 318 10 9 483 51 498 4.66e-39 149
MS.gene35599.t1 MTR_6g018790 26.850 473 309 9 16 483 98 538 1.12e-38 148
MS.gene35599.t1 MTR_5g020270 26.799 403 286 4 82 483 90 484 1.21e-38 147
MS.gene35599.t1 MTR_7g113970 25.980 408 282 6 82 485 102 493 2.17e-38 147
MS.gene35599.t1 MTR_5g020270 26.531 392 279 4 93 483 1 384 3.77e-38 144
MS.gene35599.t1 MTR_7g113960 27.160 405 275 7 82 483 67 454 4.62e-38 145
MS.gene35599.t1 MTR_5g019870 26.879 439 293 9 75 490 49 482 1.73e-37 144
MS.gene35599.t1 MTR_2g020710 27.586 406 273 7 83 483 1 390 2.91e-37 142
MS.gene35599.t1 MTR_1g116650 26.980 404 272 7 107 505 146 531 4.33e-37 144
MS.gene35599.t1 MTR_2g020710 27.518 407 274 7 82 483 89 479 5.85e-37 142
MS.gene35599.t1 MTR_4g069500 30.462 325 197 8 202 505 3 319 1.79e-35 135
MS.gene35599.t1 MTR_4g118610 26.034 411 275 8 82 483 92 482 8.37e-35 136
MS.gene35599.t1 MTR_7g082270 26.230 427 281 9 9 432 51 446 1.58e-34 135
MS.gene35599.t1 MTR_3g080240 27.489 462 297 13 28 483 98 527 2.69e-34 135
MS.gene35599.t1 MTR_0064s0040 47.651 149 65 2 4 151 5 141 5.01e-34 126
MS.gene35599.t1 MTR_1g022315 25.610 410 283 5 82 483 89 484 5.70e-34 134
MS.gene35599.t1 MTR_1g022315 25.000 396 281 4 93 483 1 385 2.26e-33 130
MS.gene35599.t1 MTR_5g077580 24.581 537 291 11 34 483 37 546 5.48e-33 132
MS.gene35599.t1 MTR_2g049020 30.792 341 208 8 34 364 37 359 5.48e-33 132
MS.gene35599.t1 MTR_7g094110 27.047 403 260 7 82 483 82 451 7.43e-33 130
MS.gene35599.t1 MTR_2g048720 29.882 338 213 8 34 365 37 356 1.20e-32 131
MS.gene35599.t1 MTR_4g013205 26.180 466 300 12 28 485 41 470 1.28e-32 130
MS.gene35599.t1 MTR_5g020270 25.743 404 268 7 82 483 90 463 2.43e-32 129
MS.gene35599.t1 MTR_8g077310 27.817 284 198 2 82 365 87 363 3.07e-29 119
MS.gene35599.t1 MTR_6g087910 25.369 406 268 9 92 485 102 484 2.07e-28 118
MS.gene35599.t1 MTR_2g026160 29.710 276 184 3 106 372 94 368 4.59e-28 118
MS.gene35599.t1 MTR_7g113970 26.277 274 194 3 82 355 102 367 4.68e-26 110
MS.gene35599.t1 MTR_2g020710 26.627 338 227 7 82 414 89 410 4.84e-26 110
MS.gene35599.t1 MTR_7g113960 27.407 270 188 3 82 351 67 328 5.84e-26 109
MS.gene35599.t1 MTR_2g020710 27.715 267 184 4 82 347 89 347 7.72e-26 110
MS.gene35599.t1 MTR_2g020710 27.715 267 184 4 82 347 89 347 1.07e-25 108
MS.gene35599.t1 MTR_4g064820 26.741 359 234 8 22 363 95 441 3.62e-25 108
MS.gene35599.t1 MTR_4g118610 24.854 342 228 8 82 414 92 413 3.59e-24 105
MS.gene35599.t1 MTR_1g038620 34.375 160 86 3 201 360 50 190 8.63e-24 99.0
MS.gene35599.t1 MTR_1g114280 34.868 152 80 2 346 497 21 153 2.43e-21 91.3
MS.gene35599.t1 MTR_2g026140 25.648 347 218 8 29 365 30 346 3.78e-20 94.0
MS.gene35599.t1 MTR_3g116060 30.636 173 113 4 90 258 52 221 7.32e-17 84.3
MS.gene35599.t1 MTR_3g116060 27.586 232 147 6 263 481 488 711 3.21e-13 72.8
MS.gene35599.t1 MTR_3g118530 30.409 171 116 3 90 258 54 223 7.19e-16 81.3
MS.gene35599.t1 MTR_3g118530 27.727 220 139 5 274 481 510 721 4.01e-12 69.3
MS.gene35599.t1 MTR_3g118530 30.409 171 116 3 90 258 54 223 1.47e-15 80.1
MS.gene35599.t1 MTR_5g044910 28.902 173 120 3 83 253 47 218 3.91e-15 78.6
MS.gene35599.t1 MTR_5g024740 27.119 236 150 7 21 253 2 218 7.56e-15 77.8
MS.gene35599.t1 MTR_8g073100 27.933 179 126 3 77 253 41 218 1.41e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35599.t1 AT1G34580 63.147 502 181 3 1 498 1 502 0.0 644
MS.gene35599.t1 AT1G34580 62.389 452 167 2 50 498 1 452 0.0 579
MS.gene35599.t1 AT1G11260 52.941 510 234 5 1 506 1 508 0.0 527
MS.gene35599.t1 AT3G19930 52.000 500 235 4 4 500 3 500 5.30e-179 513
MS.gene35599.t1 AT3G19930 52.000 500 235 4 4 500 3 500 5.30e-179 513
MS.gene35599.t1 AT4G21480 52.191 502 236 4 1 500 1 500 4.11e-177 508
MS.gene35599.t1 AT5G26340 48.527 509 254 6 1 504 1 506 1.18e-175 504
MS.gene35599.t1 AT5G23270 51.690 503 232 7 1 496 1 499 6.35e-175 502
MS.gene35599.t1 AT3G19940 50.405 494 236 5 19 505 21 512 8.61e-175 502
MS.gene35599.t1 AT4G02050 47.945 511 254 6 1 506 1 504 1.11e-172 496
MS.gene35599.t1 AT4G02050 47.945 511 254 6 1 506 1 504 1.11e-172 496
MS.gene35599.t1 AT1G50310 50.515 485 235 5 19 500 21 503 2.60e-170 491
MS.gene35599.t1 AT5G61520 47.119 486 246 5 17 495 18 499 3.82e-161 467
MS.gene35599.t1 AT5G26250 45.783 498 264 5 9 504 8 501 2.53e-155 452
MS.gene35599.t1 AT3G05960 44.600 500 271 5 9 506 7 502 3.80e-150 439
MS.gene35599.t1 AT5G61520 46.256 454 233 5 49 495 2 451 2.18e-146 428
MS.gene35599.t1 AT1G77210 43.222 509 278 9 1 503 1 504 2.18e-146 429
MS.gene35599.t1 AT1G77210 43.222 509 278 9 1 503 1 504 2.18e-146 429
MS.gene35599.t1 AT1G07340 43.426 502 275 6 1 498 1 497 2.35e-139 411
MS.gene35599.t1 AT1G50310 49.432 352 174 4 151 500 11 360 2.09e-118 353
MS.gene35599.t1 AT1G77210 40.845 355 203 7 151 503 6 355 6.48e-97 297
MS.gene35599.t1 AT3G18830 31.315 479 283 9 27 483 40 494 4.81e-59 204
MS.gene35599.t1 AT2G16120 30.539 501 301 13 27 505 30 505 1.64e-58 202
MS.gene35599.t1 AT2G16130 30.595 487 291 12 27 490 30 492 1.44e-56 197
MS.gene35599.t1 AT2G18480 31.702 470 270 11 38 483 37 479 1.90e-54 191
MS.gene35599.t1 AT4G36670 29.652 489 292 12 27 490 21 482 3.78e-52 184
MS.gene35599.t1 AT2G20780 27.254 477 311 10 20 487 51 500 3.20e-47 172
MS.gene35599.t1 AT2G48020 28.676 408 273 6 82 486 68 460 6.50e-46 167
MS.gene35599.t1 AT2G48020 28.676 408 273 6 82 486 68 460 6.50e-46 167
MS.gene35599.t1 AT2G20780 27.873 409 279 6 87 487 42 442 1.51e-45 166
MS.gene35599.t1 AT1G75220 27.612 402 284 2 82 483 88 482 2.57e-44 163
MS.gene35599.t1 AT1G54730 28.467 411 264 8 82 483 72 461 5.04e-44 162
MS.gene35599.t1 AT5G17010 29.436 479 297 12 21 483 45 498 4.42e-43 160
MS.gene35599.t1 AT5G17010 29.436 479 297 12 21 483 45 498 4.42e-43 160
MS.gene35599.t1 AT5G17010 29.436 479 297 12 21 483 45 498 4.42e-43 160
MS.gene35599.t1 AT5G16150 29.310 406 265 6 86 485 151 540 1.76e-41 156
MS.gene35599.t1 AT5G16150 29.310 406 265 6 86 485 151 540 1.76e-41 156
MS.gene35599.t1 AT5G16150 29.310 406 265 6 86 485 151 540 1.76e-41 156
MS.gene35599.t1 AT1G08930 25.880 483 314 10 8 483 42 487 1.23e-40 153
MS.gene35599.t1 AT1G08930 25.880 483 314 10 8 483 42 487 1.23e-40 153
MS.gene35599.t1 AT1G19450 26.617 402 288 2 82 483 89 483 1.77e-40 152
MS.gene35599.t1 AT1G08900 27.363 402 280 4 82 483 23 412 1.87e-40 151
MS.gene35599.t1 AT5G59250 29.278 485 291 14 22 483 97 552 3.01e-40 153
MS.gene35599.t1 AT1G08900 27.363 402 280 4 82 483 57 446 4.51e-40 150
MS.gene35599.t1 AT1G08900 27.363 402 280 4 82 483 65 454 4.67e-40 151
MS.gene35599.t1 AT1G08900 27.363 402 280 4 82 483 65 454 4.67e-40 151
MS.gene35599.t1 AT5G27350 26.980 404 279 5 84 485 73 462 7.28e-40 150
MS.gene35599.t1 AT1G54730 27.561 410 248 9 82 483 72 440 3.07e-39 148
MS.gene35599.t1 AT1G54730 28.649 370 234 8 82 442 72 420 4.37e-39 147
MS.gene35599.t1 AT3G05160 26.068 468 315 5 16 483 14 450 7.18e-39 147
MS.gene35599.t1 AT3G03090 30.383 418 255 10 85 483 98 498 1.28e-38 147
MS.gene35599.t1 AT3G05165 26.068 468 315 5 16 483 23 459 3.73e-38 145
MS.gene35599.t1 AT3G05165 26.068 468 315 5 16 483 23 459 3.73e-38 145
MS.gene35599.t1 AT3G05165 26.068 468 315 5 16 483 23 459 3.73e-38 145
MS.gene35599.t1 AT3G05400 26.667 405 283 5 82 485 66 457 4.25e-38 145
MS.gene35599.t1 AT3G05160 27.000 400 280 3 84 483 14 401 5.16e-38 144
MS.gene35599.t1 AT3G05160 27.000 400 280 3 84 483 14 401 5.16e-38 144
MS.gene35599.t1 AT4G04760 27.833 406 276 5 82 483 12 404 1.02e-37 143
MS.gene35599.t1 AT3G05400 29.032 372 249 6 116 485 79 437 1.70e-37 143
MS.gene35599.t1 AT4G04760 27.833 406 276 5 82 483 71 463 3.19e-37 143
MS.gene35599.t1 AT1G08890 28.218 404 274 8 82 483 67 456 2.05e-36 140
MS.gene35599.t1 AT1G08900 28.116 345 236 4 82 426 65 397 3.48e-36 139
MS.gene35599.t1 AT4G04750 26.895 409 275 6 82 483 76 467 4.21e-36 140
MS.gene35599.t1 AT4G04750 26.895 409 275 6 82 483 76 467 4.21e-36 140
MS.gene35599.t1 AT2G43330 29.040 396 261 11 107 492 99 484 4.93e-36 140
MS.gene35599.t1 AT4G04760 27.654 405 275 5 82 483 71 460 5.24e-36 140
MS.gene35599.t1 AT4G04750 26.895 409 275 6 82 483 120 511 6.73e-36 140
MS.gene35599.t1 AT5G18840 25.558 403 287 4 82 483 84 474 8.98e-36 139
MS.gene35599.t1 AT3G05150 29.167 408 266 7 82 483 75 465 9.72e-36 139
MS.gene35599.t1 AT3G05150 29.167 408 266 7 82 483 75 465 9.72e-36 139
MS.gene35599.t1 AT3G05150 28.501 407 270 6 82 483 75 465 1.13e-35 139
MS.gene35599.t1 AT5G27360 25.250 400 287 4 84 483 77 464 2.71e-35 138
MS.gene35599.t1 AT5G27360 25.250 400 287 4 84 483 125 512 6.94e-35 137
MS.gene35599.t1 AT3G05155 25.248 404 284 7 82 483 67 454 7.02e-35 136
MS.gene35599.t1 AT1G54730 27.642 369 218 9 82 442 72 399 2.36e-34 134
MS.gene35599.t1 AT3G05165 26.034 411 273 5 16 426 23 402 3.75e-34 135
MS.gene35599.t1 AT1G54730 28.363 342 215 8 82 414 72 392 4.14e-34 133
MS.gene35599.t1 AT1G54730 28.363 342 215 8 82 414 72 392 4.14e-34 133
MS.gene35599.t1 AT1G30220 31.609 348 206 8 34 374 39 361 5.84e-34 135
MS.gene35599.t1 AT3G05165 26.034 411 273 5 16 426 23 402 1.24e-33 133
MS.gene35599.t1 AT3G05165 26.034 411 273 5 16 426 23 402 1.24e-33 133
MS.gene35599.t1 AT5G27360 25.352 355 253 4 129 483 18 360 3.60e-33 130
MS.gene35599.t1 AT5G27360 25.352 355 253 4 129 483 18 360 3.60e-33 130
MS.gene35599.t1 AT1G79820 26.877 413 271 11 83 485 97 488 5.34e-32 129
MS.gene35599.t1 AT1G79820 26.877 413 271 11 83 485 97 488 5.34e-32 129
MS.gene35599.t1 AT1G67300 28.256 407 257 11 92 485 103 487 6.15e-32 128
MS.gene35599.t1 AT1G67300 28.256 407 257 11 92 485 103 487 6.15e-32 128
MS.gene35599.t1 AT2G48020 27.915 283 195 3 82 363 68 342 1.18e-31 126
MS.gene35599.t1 AT1G54730 29.496 278 172 6 82 351 72 333 2.67e-31 124
MS.gene35599.t1 AT1G67300 27.966 354 225 9 92 435 103 436 7.13e-31 125
MS.gene35599.t1 AT1G67300 27.966 354 225 9 92 435 103 436 7.13e-31 125
MS.gene35599.t1 AT4G16480 30.172 348 215 7 34 371 38 367 8.30e-31 126
MS.gene35599.t1 AT4G16480 30.172 348 215 7 34 371 38 367 8.30e-31 126
MS.gene35599.t1 AT4G16480 30.172 348 215 7 34 371 38 367 8.30e-31 126
MS.gene35599.t1 AT2G48020 27.174 276 193 2 82 357 68 335 1.86e-30 122
MS.gene35599.t1 AT1G67300 28.010 407 259 11 92 485 103 488 2.20e-30 124
MS.gene35599.t1 AT1G67300 28.909 339 211 9 92 420 103 421 5.33e-30 122
MS.gene35599.t1 AT1G67300 28.909 339 211 9 92 420 103 421 5.33e-30 122
MS.gene35599.t1 AT1G54730 30.040 253 156 5 82 326 72 311 6.10e-30 120
MS.gene35599.t1 AT1G54730 30.040 253 156 5 82 326 72 311 6.10e-30 120
MS.gene35599.t1 AT1G05030 24.947 469 314 12 21 483 77 513 8.04e-30 122
MS.gene35599.t1 AT1G54730 30.040 253 156 5 82 326 72 311 1.34e-29 120
MS.gene35599.t1 AT1G05030 25.990 404 277 9 87 483 73 461 2.06e-29 121
MS.gene35599.t1 AT3G20460 24.814 403 289 6 82 483 93 482 6.04e-29 120
MS.gene35599.t1 AT2G35740 26.437 348 230 5 34 372 37 367 1.66e-27 116
MS.gene35599.t1 AT1G08920 23.775 408 287 6 82 483 72 461 2.27e-27 115
MS.gene35599.t1 AT1G08920 22.906 406 300 5 82 483 72 468 2.84e-27 115
MS.gene35599.t1 AT1G79820 26.966 356 238 10 83 433 97 435 9.73e-27 113
MS.gene35599.t1 AT5G27360 23.442 337 246 4 84 420 77 401 8.15e-25 107
MS.gene35599.t1 AT1G08920 23.647 351 244 6 82 426 72 404 1.38e-23 103
MS.gene35599.t1 AT5G17010 25.826 484 248 14 21 483 42 435 2.59e-23 102
MS.gene35599.t1 AT3G05155 23.985 271 193 4 82 351 67 325 3.11e-23 100
MS.gene35599.t1 AT1G79820 25.799 407 235 11 83 485 97 440 1.06e-21 98.2
MS.gene35599.t1 AT3G51490 31.383 188 125 4 87 272 2 187 3.45e-20 94.7
MS.gene35599.t1 AT3G51490 27.155 232 150 6 262 481 440 664 2.85e-12 69.7
MS.gene35599.t1 AT3G51490 31.383 188 125 4 87 272 52 237 4.72e-20 94.4
MS.gene35599.t1 AT3G51490 31.383 188 125 4 87 272 52 237 5.21e-20 94.0
MS.gene35599.t1 AT3G51490 27.155 232 150 6 262 481 490 714 3.21e-12 69.7
MS.gene35599.t1 AT1G79820 25.753 365 204 11 125 485 77 378 5.62e-17 83.2
MS.gene35599.t1 AT1G20840 27.225 191 136 3 90 278 52 241 1.25e-16 83.6
MS.gene35599.t1 AT1G20840 27.225 191 136 3 90 278 52 241 1.25e-16 83.6
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.50e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.50e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.50e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.50e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.50e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.50e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.50e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 518 720 9.84e-11 64.7
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.56e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 508 710 8.29e-11 65.1
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.56e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 508 710 8.29e-11 65.1
MS.gene35599.t1 AT4G35300 32.184 174 114 4 87 258 52 223 2.56e-16 82.4
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 508 710 8.29e-11 65.1
MS.gene35599.t1 AT4G35300 27.830 212 131 6 283 481 321 523 7.92e-11 64.7

Find 112 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTTGTTCTATGCATTT+TGG 0.096323 3.3:+64160423 MS.gene35599:CDS
GGTCGTATTCTTCTTGGTTT+TGG 0.158443 3.3:+64158904 MS.gene35599:CDS
TGGAGTCAATGTACATTATA+TGG 0.160882 3.3:+64160504 MS.gene35599:CDS
CTTGCTGGTGCTGCTATTAA+TGG 0.180124 3.3:+64158850 MS.gene35599:CDS
GGATATGACATTGGGATTTC+AGG 0.189475 3.3:+64158103 MS.gene35599:CDS
TTACTTTCTGCCGTTATTCT+TGG 0.197875 3.3:+64159793 MS.gene35599:CDS
ATTCTTGGTCGTATTCTTCT+TGG 0.241656 3.3:+64158898 MS.gene35599:CDS
TGTTTCTATGCAGCAGGTTT+TGG 0.253764 3.3:+64160242 MS.gene35599:CDS
CTCTTTCAATCTGTGGGTTT+AGG 0.277247 3.3:+64159757 MS.gene35599:CDS
TATTGGCAGCGGTTTGTTAA+AGG 0.281916 3.3:+64160539 MS.gene35599:CDS
GGTGGTGCCATCTTTCTTGC+TGG 0.282200 3.3:+64158835 MS.gene35599:CDS
CTCTCAAAGATGGTCATAAA+TGG 0.284366 3.3:-64159643 None:intergenic
TTTGCAATGCTTTCCTGGCT+TGG 0.290814 3.3:-64159534 None:intergenic
CATTCTATTGCTTGTCTGTC+TGG 0.306011 3.3:+64159897 MS.gene35599:CDS
CTGAAATAGCTCCACCAAAA+TGG 0.311778 3.3:+64159308 MS.gene35599:CDS
AATATTGCTATGCTCATTCT+TGG 0.318012 3.3:+64158883 MS.gene35599:CDS
CTGAAAGCACCTCGCCATTT+TGG 0.328065 3.3:-64159322 None:intergenic
GCACCTTCCAATGGCTTTGA+TGG 0.330273 3.3:+64158019 MS.gene35599:CDS
ATGCTATGCCACTTCAAGTT+TGG 0.341229 3.3:+64160398 MS.gene35599:CDS
CGAAGATTCTTGTTCATTAC+GGG 0.343244 3.3:+64159871 MS.gene35599:CDS
GCATCTAGTGGACTCATTCT+TGG 0.350307 3.3:+64158082 MS.gene35599:CDS
CGCCAACTCCTATGAAGAAT+TGG 0.355831 3.3:-64159354 None:intergenic
GGTCTTGGGGCCCACTCACC+TGG 0.356458 3.3:+64160267 MS.gene35599:CDS
TCGAAGATTCTTGTTCATTA+CGG 0.369531 3.3:+64159870 MS.gene35599:CDS
GGAGTCAATGTACATTATAT+GGG 0.376356 3.3:+64160505 MS.gene35599:CDS
ACAGGCTTCCAATTCTTCAT+AGG 0.386056 3.3:+64159346 MS.gene35599:CDS
GGTGTCTGCTTTGCTAGCTT+TGG 0.387628 3.3:+64160154 MS.gene35599:CDS
GCTGCCTTTCTTAGAATATC+CGG 0.392951 3.3:-64158667 None:intergenic
ATTTCTCAATAAATTCTTCC+CGG 0.399065 3.3:+64158648 MS.gene35599:CDS
GCTTTGGCGACTGGTGTTGA+TGG 0.405109 3.3:+64160170 MS.gene35599:CDS
TATGGGGCAAACATTGGTAT+TGG 0.411822 3.3:+64160522 MS.gene35599:CDS
GGGAAGAATTTATTGAGAAA+TGG 0.413138 3.3:-64158646 None:intergenic
TGGGGCTGGCGACTCTCTCT+TGG 0.414296 3.3:+64159421 MS.gene35599:CDS
TTACTATGTTTCTATGCAGC+AGG 0.416244 3.3:+64160236 MS.gene35599:CDS
TGACTCCAAAGCAATTCCTT+TGG 0.421772 3.3:-64160489 None:intergenic
GCCACGTTCAACCAAGCTGC+TGG 0.422123 3.3:-64159503 None:intergenic
AAAGCAATTCCTTTGGTCTC+AGG 0.428168 3.3:-64160482 None:intergenic
GCTTTGCTAGCTTTGGCGAC+TGG 0.429820 3.3:+64160161 MS.gene35599:CDS
CCCACAGATTGAAAGAGGTT+TGG 0.431157 3.3:-64159751 None:intergenic
GGGCAATGCAACATTAGTAT+TGG 0.438296 3.3:+64160211 MS.gene35599:CDS
CTCATTCTTGGATATGACAT+TGG 0.445169 3.3:+64158094 MS.gene35599:CDS
TCATTCTTGGATATGACATT+GGG 0.445844 3.3:+64158095 MS.gene35599:CDS
TGAGACCAAAGGAATTGCTT+TGG 0.446229 3.3:+64160484 MS.gene35599:CDS
CTTAATGAGTTCTTCTAACT+CGG 0.449686 3.3:-64159587 None:intergenic
CTAAACCCACAGATTGAAAG+AGG 0.452624 3.3:-64159756 None:intergenic
GCCATTGGAAGGTGCATCAA+TGG 0.461494 3.3:-64158011 None:intergenic
GCCATTGATGCACCTTCCAA+TGG 0.471156 3.3:+64158010 MS.gene35599:CDS
CTTCCCGGATATTCTAAGAA+AGG 0.471446 3.3:+64158663 MS.gene35599:CDS
GCTATTTCAGAAAGGTATAG+TGG 0.472124 3.3:-64159295 None:intergenic
TTCCAATTCTTCATAGGAGT+TGG 0.473326 3.3:+64159352 MS.gene35599:CDS
CCAAACCTCTTTCAATCTGT+GGG 0.474306 3.3:+64159751 MS.gene35599:CDS
CCAATTGTCATCACGGCTGC+AGG 0.478121 3.3:-64159457 None:intergenic
ACCAAACCTCTTTCAATCTG+TGG 0.482629 3.3:+64159750 MS.gene35599:CDS
CGAAGAAATACCATCGTGTT+GGG 0.482762 3.3:+64158814 MS.gene35599:CDS
TCGCCAGCCCCATGTGTGCT+TGG 0.486469 3.3:-64159410 None:intergenic
TGGCGAGGTGCTTTCAGCAC+AGG 0.490579 3.3:+64159328 MS.gene35599:CDS
CCTGCAGCCGTGATGACAAT+TGG 0.499809 3.3:+64159457 MS.gene35599:CDS
TATCTTTCCATCAAAGCCAT+TGG 0.503256 3.3:-64158026 None:intergenic
AATTTCACTTGGAATTAGCC+AGG 0.504907 3.3:-64160285 None:intergenic
CTGCCAAGCACACATGGGGC+TGG 0.506056 3.3:+64159407 MS.gene35599:CDS
CGACAAAAGCAGTTGAGACT+AGG 0.517339 3.3:-64159837 None:intergenic
ACGTGACTGCCAAGCACACA+TGG 0.517471 3.3:+64159401 MS.gene35599:CDS
CTGCCTTTCTTAGAATATCC+GGG 0.528095 3.3:-64158666 None:intergenic
AGTTAGAAGAACTCATTAAG+TGG 0.530071 3.3:+64159590 MS.gene35599:CDS
TGCTGGGTGTGTCGGATATG+AGG 0.531185 3.3:-64159486 None:intergenic
AGGTTGAAAATGGCAGGTGG+AGG 0.531701 3.3:+64157983 None:intergenic
AACCAAGCTGCTGGGTGTGT+CGG 0.542991 3.3:-64159494 None:intergenic
AGCAGCACCAGCAAGAAAGA+TGG 0.549935 3.3:-64158842 None:intergenic
AGCAAAGTCACTGCAGCTAT+CGG 0.550701 3.3:+64158790 MS.gene35599:CDS
GCAAACATTGGTATTGGCAG+CGG 0.551125 3.3:+64160528 MS.gene35599:CDS
TGTATCGTTGCTGCATCTAG+TGG 0.552864 3.3:+64158070 MS.gene35599:CDS
ACATTATATGGGGCAAACAT+TGG 0.553331 3.3:+64160516 MS.gene35599:CDS
AGGACAAGGTTGAAAATGGC+AGG 0.553852 3.3:+64157977 None:intergenic
TCGATATTGTCTCTCAAAGA+TGG 0.553960 3.3:-64159653 None:intergenic
TCGAAGAAATACCATCGTGT+TGG 0.559517 3.3:+64158813 MS.gene35599:CDS
ATATCGACCTCACTTAATCA+TGG 0.560389 3.3:+64159669 MS.gene35599:CDS
ATCCGACACACCCAGCAGCT+TGG 0.562187 3.3:+64159492 MS.gene35599:CDS
TTGGTGGAGCTATTTCAGAA+AGG 0.562320 3.3:-64159303 None:intergenic
AGAAAGCACCAAACTTGAAG+TGG 0.564619 3.3:-64160406 None:intergenic
CCACGTTCAACCAAGCTGCT+GGG 0.564694 3.3:-64159502 None:intergenic
GGTACAAAGGACATGTCAAA+GGG 0.571326 3.3:+64160191 MS.gene35599:CDS
TTAATGAGTTCTTCTAACTC+GGG 0.576345 3.3:-64159586 None:intergenic
TTTAAGGGGAAAATTTCACT+TGG 0.579987 3.3:-64160296 None:intergenic
GGTTGAAAATGGCAGGTGGA+GGG 0.582573 3.3:+64157984 None:intergenic
TAACTCGGGCTCAACATCGA+TGG 0.583460 3.3:-64159572 None:intergenic
GTGGCATGATAAACCAAGCC+AGG 0.584674 3.3:+64159521 MS.gene35599:CDS
TGGTACAAAGGACATGTCAA+AGG 0.584833 3.3:+64160190 MS.gene35599:CDS
TTTCCATCAAAGCCATTGGA+AGG 0.597415 3.3:-64158022 None:intergenic
TTGGAATTAGCCAGGTGAGT+GGG 0.599809 3.3:-64160277 None:intergenic
GAGTCAATGTACATTATATG+GGG 0.599950 3.3:+64160506 MS.gene35599:CDS
CCCAGCAGCTTGGTTGAACG+TGG 0.607250 3.3:+64159502 MS.gene35599:CDS
GTTGACGAGTCCAAGAATAA+CGG 0.609102 3.3:-64159803 None:intergenic
AGATTCTTGTTCATTACGGG+TGG 0.611668 3.3:+64159874 MS.gene35599:CDS
GAAGGCACCAATTGTCATCA+CGG 0.622211 3.3:-64159464 None:intergenic
AAAAGCAGTTGAGACTAGGA+TGG 0.625099 3.3:-64159833 None:intergenic
GATATTCTAAGAAAGGCAGC+TGG 0.631809 3.3:+64158670 MS.gene35599:CDS
CGTGACTGCCAAGCACACAT+GGG 0.636076 3.3:+64159402 MS.gene35599:CDS
TTCAGGAGGTGTTACAACAA+TGG 0.637356 3.3:+64158621 MS.gene35599:intron
ATTCTTCATAGGAGTTGGCG+TGG 0.640365 3.3:+64159357 MS.gene35599:CDS
GCTGGTGCTGCTATTAATGG+CGG 0.645779 3.3:+64158853 MS.gene35599:CDS
AGAAATACCATCGTGTTGGG+TGG 0.646781 3.3:+64158817 MS.gene35599:CDS
TCTGTGGGTTTAGGAAACAA+TGG 0.653625 3.3:+64159766 MS.gene35599:CDS
ACTGGACAAAGTATAGCAGT+TGG 0.655773 3.3:+64160329 MS.gene35599:CDS
CTTGGAATTAGCCAGGTGAG+TGG 0.659267 3.3:-64160278 None:intergenic
TTGAGACTAGGATGGAAGCA+AGG 0.659590 3.3:-64159825 None:intergenic
ACAAGGTTGAAAATGGCAGG+TGG 0.665030 3.3:+64157980 None:intergenic
GCAAATGCCATGATTAAGTG+AGG 0.668086 3.3:-64159676 None:intergenic
GGGTGTGTCGGATATGAGGA+AGG 0.669650 3.3:-64159482 None:intergenic
GTGACTGCCAAGCACACATG+GGG 0.687081 3.3:+64159403 MS.gene35599:CDS
ATAGCTCCACCAAAATGGCG+AGG 0.691221 3.3:+64159313 MS.gene35599:CDS
GATGGCACCACCCAACACGA+TGG 0.695361 3.3:-64158824 None:intergenic
GACTGGTGTTGATGGTACAA+AGG 0.706853 3.3:+64160178 MS.gene35599:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAGTTAAACTAAAAAAA+GGG - chr3.3:64159047-64159066 None:intergenic 10.0%
!! TAAATAATATTATACACATA+TGG - chr3.3:64159939-64159958 None:intergenic 10.0%
!! TTTATAATGAAAAAACAAAA+AGG - chr3.3:64158136-64158155 None:intergenic 10.0%
!!! AGTAGAAAAATTTTAAATAA+AGG - chr3.3:64159196-64159215 None:intergenic 10.0%
!! AAAAGTTAAACTAAAAAAAG+GGG - chr3.3:64159046-64159065 None:intergenic 15.0%
!! ATTTATTTATTGTACATTCT+AGG + chr3.3:64159960-64159979 MS.gene35599:intron 15.0%
!! CTAAAAGTTAAACTAAAAAA+AGG - chr3.3:64159048-64159067 None:intergenic 15.0%
!! TAGATGGAGAAATTAAAATA+AGG - chr3.3:64160071-64160090 None:intergenic 20.0%
!! TGAAAAATGTTATCAAATTC+AGG + chr3.3:64158604-64158623 MS.gene35599:intron 20.0%
!! TTAGTAGTACAAATCTAAAT+AGG + chr3.3:64158476-64158495 MS.gene35599:intron 20.0%
!!! AACATTGCTATTTAAAATTG+CGG - chr3.3:64159071-64159090 None:intergenic 20.0%
!!! AAGCAAATTCATTTTAAACA+TGG - chr3.3:64159237-64159256 None:intergenic 20.0%
!!! TTTTATCTTCAAAATGTACT+TGG + chr3.3:64158543-64158562 MS.gene35599:intron 20.0%
! AAAATGTTATCAAATTCAGG+AGG + chr3.3:64158607-64158626 MS.gene35599:intron 25.0%
! AGTAAAAAACATGCTCTAAT+TGG - chr3.3:64158163-64158182 None:intergenic 25.0%
! AGTACAAATCTAAATAGGTT+TGG + chr3.3:64158481-64158500 MS.gene35599:intron 25.0%
! ATATAACTCGAGAATTAAAC+TGG + chr3.3:64158333-64158352 MS.gene35599:intron 25.0%
! ATTTCTCAATAAATTCTTCC+CGG + chr3.3:64158648-64158667 MS.gene35599:CDS 25.0%
! TAAACTAAAAAAAGGGGAAA+TGG - chr3.3:64159040-64159059 None:intergenic 25.0%
! TAAAGGATGCTATCAAAATT+TGG - chr3.3:64159179-64159198 None:intergenic 25.0%
! TAAGGACGAAAATTTAGATA+CGG - chr3.3:64160053-64160072 None:intergenic 25.0%
!! TTTCTTGTTCTATGCATTTT+GGG + chr3.3:64160424-64160443 MS.gene35599:CDS 25.0%
!!! TTTTATTTTGTTGACGATGT+TGG - chr3.3:64158991-64159010 None:intergenic 25.0%
AATATTGCTATGCTCATTCT+TGG + chr3.3:64158883-64158902 MS.gene35599:CDS 30.0%
AATTAACTACAGAAAGATCG+TGG + chr3.3:64160013-64160032 MS.gene35599:intron 30.0%
ACTGTATTACATGATGCAAT+TGG + chr3.3:64159261-64159280 MS.gene35599:intron 30.0%
AGATCACTATTTGAATCACA+TGG + chr3.3:64158290-64158309 MS.gene35599:intron 30.0%
AGTTAGAAGAACTCATTAAG+TGG + chr3.3:64159590-64159609 MS.gene35599:CDS 30.0%
ATTATTAGTACCAATACCAC+AGG - chr3.3:64160103-64160122 None:intergenic 30.0%
CCTGTAAACTGTTGAAAAAA+CGG - chr3.3:64159706-64159725 None:intergenic 30.0%
CTGTAAACTGTTGAAAAAAC+GGG - chr3.3:64159705-64159724 None:intergenic 30.0%
CTTAATGAGTTCTTCTAACT+CGG - chr3.3:64159590-64159609 None:intergenic 30.0%
GAGTCAATGTACATTATATG+GGG + chr3.3:64160506-64160525 MS.gene35599:CDS 30.0%
GCATAAATATCATAACCTTG+TGG + chr3.3:64159152-64159171 MS.gene35599:intron 30.0%
GGAGTCAATGTACATTATAT+GGG + chr3.3:64160505-64160524 MS.gene35599:CDS 30.0%
GGGAAGAATTTATTGAGAAA+TGG - chr3.3:64158649-64158668 None:intergenic 30.0%
TCATTCTTGGATATGACATT+GGG + chr3.3:64158095-64158114 MS.gene35599:CDS 30.0%
TCGAAGATTCTTGTTCATTA+CGG + chr3.3:64159870-64159889 MS.gene35599:CDS 30.0%
TGATTCAAATAGTGATCTAC+TGG - chr3.3:64158288-64158307 None:intergenic 30.0%
TGGAGTCAATGTACATTATA+TGG + chr3.3:64160504-64160523 MS.gene35599:CDS 30.0%
TTAATGAGTTCTTCTAACTC+GGG - chr3.3:64159589-64159608 None:intergenic 30.0%
TTACATGATGCAATTGGAAA+AGG + chr3.3:64159267-64159286 MS.gene35599:intron 30.0%
TTTAAGGGGAAAATTTCACT+TGG - chr3.3:64160299-64160318 None:intergenic 30.0%
! ATCTTTAAGAACAAGAATCG+CGG - chr3.3:64159095-64159114 None:intergenic 30.0%
! CCAGTTGTTCTGATTTTTAA+GGG - chr3.3:64160314-64160333 None:intergenic 30.0%
! CTTTCTTGTTCTATGCATTT+TGG + chr3.3:64160423-64160442 MS.gene35599:CDS 30.0%
! TCCAGTTGTTCTGATTTTTA+AGG - chr3.3:64160315-64160334 None:intergenic 30.0%
!! AAAGCATTGCAAAAAATCAG+AGG + chr3.3:64159544-64159563 MS.gene35599:CDS 30.0%
!! CAGTTGTTCTGATTTTTAAG+GGG - chr3.3:64160313-64160332 None:intergenic 30.0%
!!! CGTTTTTTCAACAGTTTACA+GGG + chr3.3:64159704-64159723 MS.gene35599:CDS 30.0%
AATTTCACTTGGAATTAGCC+AGG - chr3.3:64160288-64160307 None:intergenic 35.0%
ACATTATATGGGGCAAACAT+TGG + chr3.3:64160516-64160535 MS.gene35599:CDS 35.0%
AGTCATTATACCTGTGGTAT+TGG + chr3.3:64160090-64160109 MS.gene35599:intron 35.0%
ATATCGACCTCACTTAATCA+TGG + chr3.3:64159669-64159688 MS.gene35599:CDS 35.0%
ATTCTTGGTCGTATTCTTCT+TGG + chr3.3:64158898-64158917 MS.gene35599:CDS 35.0%
CCCTTAAAAATCAGAACAAC+TGG + chr3.3:64160311-64160330 MS.gene35599:CDS 35.0%
CGAAGATTCTTGTTCATTAC+GGG + chr3.3:64159871-64159890 MS.gene35599:CDS 35.0%
CTATCAAAATTTGGACCACA+AGG - chr3.3:64159170-64159189 None:intergenic 35.0%
CTCATTCTTGGATATGACAT+TGG + chr3.3:64158094-64158113 MS.gene35599:CDS 35.0%
CTCTCAAAGATGGTCATAAA+TGG - chr3.3:64159646-64159665 None:intergenic 35.0%
GATCAATCATTGTTGTATCG+TGG + chr3.3:64159121-64159140 MS.gene35599:intron 35.0%
TATCTTTCCATCAAAGCCAT+TGG - chr3.3:64158029-64158048 None:intergenic 35.0%
TCGATATTGTCTCTCAAAGA+TGG - chr3.3:64159656-64159675 None:intergenic 35.0%
TTACTTTCTGCCGTTATTCT+TGG + chr3.3:64159793-64159812 MS.gene35599:CDS 35.0%
TTCCAATTCTTCATAGGAGT+TGG + chr3.3:64159352-64159371 MS.gene35599:CDS 35.0%
! AAGTGTGAGCTTTATGACTT+TGG - chr3.3:64158576-64158595 None:intergenic 35.0%
! GCTATTTCAGAAAGGTATAG+TGG - chr3.3:64159298-64159317 None:intergenic 35.0%
! TTACTATGTTTCTATGCAGC+AGG + chr3.3:64160236-64160255 MS.gene35599:CDS 35.0%
! TTCTTTTTACCTGAGACCAA+AGG + chr3.3:64160473-64160492 MS.gene35599:CDS 35.0%
!! GTCGTATTCTTCTTGGTTTT+GGG + chr3.3:64158905-64158924 MS.gene35599:CDS 35.0%
!!! ATTCTTCTTGGTTTTGGGAT+CGG + chr3.3:64158910-64158929 MS.gene35599:CDS 35.0%
!!! CCGTTTTTTCAACAGTTTAC+AGG + chr3.3:64159703-64159722 MS.gene35599:CDS 35.0%
!!! GATTTTTTGCAATGCTTTCC+TGG - chr3.3:64159542-64159561 None:intergenic 35.0%
AAAAGCAGTTGAGACTAGGA+TGG - chr3.3:64159836-64159855 None:intergenic 40.0%
AAAGCAATTCCTTTGGTCTC+AGG - chr3.3:64160485-64160504 None:intergenic 40.0%
ACAGGCTTCCAATTCTTCAT+AGG + chr3.3:64159346-64159365 MS.gene35599:CDS 40.0%
ACCAAACCTCTTTCAATCTG+TGG + chr3.3:64159750-64159769 MS.gene35599:CDS 40.0%
ACTGGACAAAGTATAGCAGT+TGG + chr3.3:64160329-64160348 MS.gene35599:CDS 40.0%
AGATTCTTGTTCATTACGGG+TGG + chr3.3:64159874-64159893 MS.gene35599:CDS 40.0%
CATGATGCAATTGGAAAAGG+CGG + chr3.3:64159270-64159289 MS.gene35599:intron 40.0%
CATTCTATTGCTTGTCTGTC+TGG + chr3.3:64159897-64159916 MS.gene35599:CDS 40.0%
CCAAACCTCTTTCAATCTGT+GGG + chr3.3:64159751-64159770 MS.gene35599:CDS 40.0%
CCACAGGTATAATGACTAGA+TGG - chr3.3:64160087-64160106 None:intergenic 40.0%
CCATCTAGTCATTATACCTG+TGG + chr3.3:64160084-64160103 MS.gene35599:intron 40.0%
CGAAGAAATACCATCGTGTT+GGG + chr3.3:64158814-64158833 MS.gene35599:CDS 40.0%
CTAAACCCACAGATTGAAAG+AGG - chr3.3:64159759-64159778 None:intergenic 40.0%
CTCTTTCAATCTGTGGGTTT+AGG + chr3.3:64159757-64159776 MS.gene35599:CDS 40.0%
CTGAAATAGCTCCACCAAAA+TGG + chr3.3:64159308-64159327 MS.gene35599:CDS 40.0%
CTGCCTTTCTTAGAATATCC+GGG - chr3.3:64158669-64158688 None:intergenic 40.0%
GCAAATGCCATGATTAAGTG+AGG - chr3.3:64159679-64159698 None:intergenic 40.0%
GCTGCCTTTCTTAGAATATC+CGG - chr3.3:64158670-64158689 None:intergenic 40.0%
GGATATGACATTGGGATTTC+AGG + chr3.3:64158103-64158122 MS.gene35599:CDS 40.0%
GGGCAATGCAACATTAGTAT+TGG + chr3.3:64160211-64160230 MS.gene35599:CDS 40.0%
GGTACAAAGGACATGTCAAA+GGG + chr3.3:64160191-64160210 MS.gene35599:CDS 40.0%
GTTGACGAGTCCAAGAATAA+CGG - chr3.3:64159806-64159825 None:intergenic 40.0%
TATGGGGCAAACATTGGTAT+TGG + chr3.3:64160522-64160541 MS.gene35599:CDS 40.0%
TCGAAGAAATACCATCGTGT+TGG + chr3.3:64158813-64158832 MS.gene35599:CDS 40.0%
TCTGTGGGTTTAGGAAACAA+TGG + chr3.3:64159766-64159785 MS.gene35599:CDS 40.0%
TGACTCCAAAGCAATTCCTT+TGG - chr3.3:64160492-64160511 None:intergenic 40.0%
TGAGACCAAAGGAATTGCTT+TGG + chr3.3:64160484-64160503 MS.gene35599:CDS 40.0%
TGGTACAAAGGACATGTCAA+AGG + chr3.3:64160190-64160209 MS.gene35599:CDS 40.0%
TTTCCATCAAAGCCATTGGA+AGG - chr3.3:64158025-64158044 None:intergenic 40.0%
! ATGCTATGCCACTTCAAGTT+TGG + chr3.3:64160398-64160417 MS.gene35599:CDS 40.0%
! CTTCCCGGATATTCTAAGAA+AGG + chr3.3:64158663-64158682 MS.gene35599:CDS 40.0%
! GATATTCTAAGAAAGGCAGC+TGG + chr3.3:64158670-64158689 MS.gene35599:CDS 40.0%
! GATCTACTGGTTAGTGACTT+TGG - chr3.3:64158275-64158294 None:intergenic 40.0%
! GGTCGTATTCTTCTTGGTTT+TGG + chr3.3:64158904-64158923 MS.gene35599:CDS 40.0%
! TTGGTGGAGCTATTTCAGAA+AGG - chr3.3:64159306-64159325 None:intergenic 40.0%
!! AGAAAGCACCAAACTTGAAG+TGG - chr3.3:64160409-64160428 None:intergenic 40.0%
!! GTTGACGCTTTGAAAGATTG+CGG + chr3.3:64160133-64160152 MS.gene35599:intron 40.0%
!! TATTGGCAGCGGTTTGTTAA+AGG + chr3.3:64160539-64160558 MS.gene35599:CDS 40.0%
!! TCTCAACTGCTTTTGTCGAT+CGG + chr3.3:64159842-64159861 MS.gene35599:CDS 40.0%
!! TGTTTCTATGCAGCAGGTTT+TGG + chr3.3:64160242-64160261 MS.gene35599:CDS 40.0%
!! TTCAGGAGGTGTTACAACAA+TGG + chr3.3:64158621-64158640 MS.gene35599:intron 40.0%
AGAAATACCATCGTGTTGGG+TGG + chr3.3:64158817-64158836 MS.gene35599:CDS 45.0%
AGCAAAGTCACTGCAGCTAT+CGG + chr3.3:64158790-64158809 MS.gene35599:CDS 45.0%
ATTCTTCATAGGAGTTGGCG+TGG + chr3.3:64159357-64159376 MS.gene35599:CDS 45.0%
ATTGTTGTATCGTGGTCGCT+GGG + chr3.3:64159129-64159148 MS.gene35599:intron 45.0%
CCCACAGATTGAAAGAGGTT+TGG - chr3.3:64159754-64159773 None:intergenic 45.0%
CGACAAAAGCAGTTGAGACT+AGG - chr3.3:64159840-64159859 None:intergenic 45.0%
CGCCAACTCCTATGAAGAAT+TGG - chr3.3:64159357-64159376 None:intergenic 45.0%
TGTATCGTTGCTGCATCTAG+TGG + chr3.3:64158070-64158089 MS.gene35599:CDS 45.0%
TTGAGACTAGGATGGAAGCA+AGG - chr3.3:64159828-64159847 None:intergenic 45.0%
TTGGAATTAGCCAGGTGAGT+GGG - chr3.3:64160280-64160299 None:intergenic 45.0%
TTTGCAATGCTTTCCTGGCT+TGG - chr3.3:64159537-64159556 None:intergenic 45.0%
!! ACTGCTTTTGTCGATCGGTT+TGG + chr3.3:64159847-64159866 MS.gene35599:CDS 45.0%
!! CTTGCTGGTGCTGCTATTAA+TGG + chr3.3:64158850-64158869 MS.gene35599:CDS 45.0%
!! GAAGGCACCAATTGTCATCA+CGG - chr3.3:64159467-64159486 None:intergenic 45.0%
!! GACTGGTGTTGATGGTACAA+AGG + chr3.3:64160178-64160197 MS.gene35599:CDS 45.0%
!! GCAAACATTGGTATTGGCAG+CGG + chr3.3:64160528-64160547 MS.gene35599:CDS 45.0%
!! GCATCTAGTGGACTCATTCT+TGG + chr3.3:64158082-64158101 MS.gene35599:CDS 45.0%
!! TCTATGCAGCAGGTTTTGGT+TGG + chr3.3:64160246-64160265 MS.gene35599:CDS 45.0%
!!! AGCAGGTTTTGGTTGGTCTT+GGG + chr3.3:64160253-64160272 MS.gene35599:CDS 45.0%
AGCAGCACCAGCAAGAAAGA+TGG - chr3.3:64158845-64158864 None:intergenic 50.0%
ATAGCTCCACCAAAATGGCG+AGG + chr3.3:64159313-64159332 MS.gene35599:CDS 50.0%
CATTGTTGTATCGTGGTCGC+TGG + chr3.3:64159128-64159147 MS.gene35599:intron 50.0%
CTTGGAATTAGCCAGGTGAG+TGG - chr3.3:64160281-64160300 None:intergenic 50.0%
GCCATTGATGCACCTTCCAA+TGG + chr3.3:64158010-64158029 MS.gene35599:CDS 50.0%
GGTTAGTGACTTTGGCGAGT+CGG - chr3.3:64158267-64158286 None:intergenic 50.0%
GTGGCATGATAAACCAAGCC+AGG + chr3.3:64159521-64159540 MS.gene35599:CDS 50.0%
TAACTCGGGCTCAACATCGA+TGG - chr3.3:64159575-64159594 None:intergenic 50.0%
TTGTTGTATCGTGGTCGCTG+GGG + chr3.3:64159130-64159149 MS.gene35599:intron 50.0%
! GCCATTGGAAGGTGCATCAA+TGG - chr3.3:64158014-64158033 None:intergenic 50.0%
! GGTGTCTGCTTTGCTAGCTT+TGG + chr3.3:64160154-64160173 MS.gene35599:CDS 50.0%
!! AAAGCACCTCGCCATTTTGG+TGG - chr3.3:64159322-64159341 None:intergenic 50.0%
!! GCACCTTCCAATGGCTTTGA+TGG + chr3.3:64158019-64158038 MS.gene35599:CDS 50.0%
!! GCTGGTGCTGCTATTAATGG+CGG + chr3.3:64158853-64158872 MS.gene35599:CDS 50.0%
!!! CAGCAGGTTTTGGTTGGTCT+TGG + chr3.3:64160252-64160271 MS.gene35599:CDS 50.0%
!!! CTGAAAGCACCTCGCCATTT+TGG - chr3.3:64159325-64159344 None:intergenic 50.0%
!!! GCAGGTTTTGGTTGGTCTTG+GGG + chr3.3:64160254-64160273 MS.gene35599:CDS 50.0%
AACCAAGCTGCTGGGTGTGT+CGG - chr3.3:64159497-64159516 None:intergenic 55.0%
ACGTGACTGCCAAGCACACA+TGG + chr3.3:64159401-64159420 MS.gene35599:CDS 55.0%
CCAATTGTCATCACGGCTGC+AGG - chr3.3:64159460-64159479 None:intergenic 55.0%
CCACGTTCAACCAAGCTGCT+GGG - chr3.3:64159505-64159524 None:intergenic 55.0%
CCTGCAGCCGTGATGACAAT+TGG + chr3.3:64159457-64159476 MS.gene35599:CDS 55.0%
CGTGACTGCCAAGCACACAT+GGG + chr3.3:64159402-64159421 MS.gene35599:CDS 55.0%
GGGTGTGTCGGATATGAGGA+AGG - chr3.3:64159485-64159504 None:intergenic 55.0%
GTGACTGCCAAGCACACATG+GGG + chr3.3:64159403-64159422 MS.gene35599:CDS 55.0%
TGCTGGGTGTGTCGGATATG+AGG - chr3.3:64159489-64159508 None:intergenic 55.0%
! GCTTTGGCGACTGGTGTTGA+TGG + chr3.3:64160170-64160189 MS.gene35599:CDS 55.0%
!! GCTTTGCTAGCTTTGGCGAC+TGG + chr3.3:64160161-64160180 MS.gene35599:CDS 55.0%
!! GGTGGTGCCATCTTTCTTGC+TGG + chr3.3:64158835-64158854 MS.gene35599:CDS 55.0%
ATCCGACACACCCAGCAGCT+TGG + chr3.3:64159492-64159511 MS.gene35599:CDS 60.0%
CCCAGCAGCTTGGTTGAACG+TGG + chr3.3:64159502-64159521 MS.gene35599:CDS 60.0%
GATGGCACCACCCAACACGA+TGG - chr3.3:64158827-64158846 None:intergenic 60.0%
GCCACGTTCAACCAAGCTGC+TGG - chr3.3:64159506-64159525 None:intergenic 60.0%
! TGGCGAGGTGCTTTCAGCAC+AGG + chr3.3:64159328-64159347 MS.gene35599:CDS 60.0%
CTGCCAAGCACACATGGGGC+TGG + chr3.3:64159407-64159426 MS.gene35599:CDS 65.0%
TCGCCAGCCCCATGTGTGCT+TGG - chr3.3:64159413-64159432 None:intergenic 65.0%
! TGGGGCTGGCGACTCTCTCT+TGG + chr3.3:64159421-64159440 MS.gene35599:CDS 65.0%
GGTCTTGGGGCCCACTCACC+TGG + chr3.3:64160267-64160286 MS.gene35599:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 64157992 64160589 64157992 ID=MS.gene35599
chr3.3 mRNA 64157992 64160589 64157992 ID=MS.gene35599.t1;Parent=MS.gene35599
chr3.3 exon 64157992 64158124 64157992 ID=MS.gene35599.t1.exon1;Parent=MS.gene35599.t1
chr3.3 CDS 64157992 64158124 64157992 ID=cds.MS.gene35599.t1;Parent=MS.gene35599.t1
chr3.3 exon 64158626 64158945 64158626 ID=MS.gene35599.t1.exon2;Parent=MS.gene35599.t1
chr3.3 CDS 64158626 64158945 64158626 ID=cds.MS.gene35599.t1;Parent=MS.gene35599.t1
chr3.3 exon 64159289 64159918 64159289 ID=MS.gene35599.t1.exon3;Parent=MS.gene35599.t1
chr3.3 CDS 64159289 64159918 64159289 ID=cds.MS.gene35599.t1;Parent=MS.gene35599.t1
chr3.3 exon 64160149 64160589 64160149 ID=MS.gene35599.t1.exon4;Parent=MS.gene35599.t1
chr3.3 CDS 64160149 64160589 64160149 ID=cds.MS.gene35599.t1;Parent=MS.gene35599.t1
Gene Sequence

>MS.gene35599

ATGGCAGGTGGAGGGTTTGCCATTGATGCACCTTCCAATGGCTTTGATGGAAAGATAACACTCTCAGTTATCATTACTTGTATCGTTGCTGCATCTAGTGGACTCATTCTTGGATATGACATTGGGATTTCAGGTTTTCTTCCTTTTTGTTTTTTCATTATAAAGTATCCAATTAGAGCATGTTTTTTACTTTCTAAAGTATCTTGTATTATTCTGCTACATCAATCTTTGCTCAAAAATGAAAGAAAATGTTTTAAACAATGTTTCAGAAACCGACTCGCCAAAGTCACTAACCAGTAGATCACTATTTGAATCACATGGTTAAATTGAATGATTTGATCATATAACTCGAGAATTAAACTGGACTCAGCACGATGTTTGTTTATGTAGAAAATTCTAAAAAAAAAATTTATATCTATAAAATGTCAAAATCATTAGAGAAATTAACATTATTGCACAAGCTCAATCTTCAAATTTAAAACTTTTAGTAGTACAAATCTAAATAGGTTTGGACAAAGTCTAATTGCATGATGCTATATATATTTTTTGCATTTTATCTTCAAAATGTACTTGGAGAAGAACCAAAGTCATAAAGCTCACACTTTTTACTAATGAAAAATGTTATCAAATTCAGGAGGTGTTACAACAATGGTGCCATTTCTCAATAAATTCTTCCCGGATATTCTAAGAAAGGCAGCTGGTACTGAAGTAAACATGTACTGTGTGTATGACAGTCAAATGTTGACATTGTTTACGTCTTCTCTGTATTTAGCTGCGTTAGTGTCAACTCTTGTAGCTAGCAAAGTCACTGCAGCTATCGGTCGAAGAAATACCATCGTGTTGGGTGGTGCCATCTTTCTTGCTGGTGCTGCTATTAATGGCGGTTCTGAAAATATTGCTATGCTCATTCTTGGTCGTATTCTTCTTGGTTTTGGGATCGGTTTCTCTAGTCAAGTAAGTGAACATATACAATCATACACATTTGTTAATAGTAGTCCAACATCGTCAACAAAATAAAATTTTCTATTATACATAAGCATTGAGACCATTTCCCCTTTTTTTAGTTTAACTTTTAGCCGCAATTTTAAATAGCAATGTTGCCGCGATTCTTGTTCTTAAAGATAATTGTGATCAATCATTGTTGTATCGTGGTCGCTGGGGCATAAATATCATAACCTTGTGGTCCAAATTTTGATAGCATCCTTTATTTAAAATTTTTCTACTAACTTTTAACTTAAGAAACCATGTTTAAAATGAATTTGCTTGCTAACTGTATTACATGATGCAATTGGAAAAGGCGGCTCCACTATACCTTTCTGAAATAGCTCCACCAAAATGGCGAGGTGCTTTCAGCACAGGCTTCCAATTCTTCATAGGAGTTGGCGTGGTTGCTGCATGTTGCATAAATTACGTGACTGCCAAGCACACATGGGGCTGGCGACTCTCTCTTGGACTAGCAGTAGTGCCTGCAGCCGTGATGACAATTGGTGCCTTCCTCATATCCGACACACCCAGCAGCTTGGTTGAACGTGGCATGATAAACCAAGCCAGGAAAGCATTGCAAAAAATCAGAGGATCATCCATCGATGTTGAGCCCGAGTTAGAAGAACTCATTAAGTGGACAGAAATTTCGAAAGCAGTGCAACAAGAGCCATTTATGACCATCTTTGAGAGACAATATCGACCTCACTTAATCATGGCATTTGCAATCCCGTTTTTTCAACAGTTTACAGGGATCAACATCGTCGCTTTCTATTCACCAAACCTCTTTCAATCTGTGGGTTTAGGAAACAATGGTGCTTTACTTTCTGCCGTTATTCTTGGACTCGTCAACCTTGCTTCCATCCTAGTCTCAACTGCTTTTGTCGATCGGTTTGGTCGAAGATTCTTGTTCATTACGGGTGGCATTCTATTGCTTGTCTGTCTGGTAAGCAAATTAAGCAACCATATGTGTATAATATTATTTATATTTATTTATTGTACATTCTAGGTTTTTCATACTCTCAACTACTAAATAAATGAATTAACTACAGAAAGATCGTGGTACTAATGCTTTTTCCGTATCTAAATTTTCGTCCTTATTTTAATTTCTCCATCTAGTCATTATACCTGTGGTATTGGTACTAATAATTATAATTTGTGTTGACGCTTTGAAAGATTGCGGTGTCTGCTTTGCTAGCTTTGGCGACTGGTGTTGATGGTACAAAGGACATGTCAAAGGGCAATGCAACATTAGTATTGGTTTTACTATGTTTCTATGCAGCAGGTTTTGGTTGGTCTTGGGGCCCACTCACCTGGCTAATTCCAAGTGAAATTTTCCCCTTAAAAATCAGAACAACTGGACAAAGTATAGCAGTTGGTGTACAATTCATAATCTTGTTTGTGTTATCACAAACATTCTTGACAATGCTATGCCACTTCAAGTTTGGTGCTTTCTTGTTCTATGCATTTTGGGTTGCAGTGATGACACTATTTATTATTTTCTTTTTACCTGAGACCAAAGGAATTGCTTTGGAGTCAATGTACATTATATGGGGCAAACATTGGTATTGGCAGCGGTTTGTTAAAGGAGAAGTTGATAAAAACAATCTTCCATGA
Protein sequence

>MS.gene35599.t1

MAGGGFAIDAPSNGFDGKITLSVIITCIVAASSGLILGYDIGISGGVTTMVPFLNKFFPDILRKAAGTEVNMYCVYDSQMLTLFTSSLYLAALVSTLVASKVTAAIGRRNTIVLGGAIFLAGAAINGGSENIAMLILGRILLGFGIGFSSQAAPLYLSEIAPPKWRGAFSTGFQFFIGVGVVAACCINYVTAKHTWGWRLSLGLAVVPAAVMTIGAFLISDTPSSLVERGMINQARKALQKIRGSSIDVEPELEELIKWTEISKAVQQEPFMTIFERQYRPHLIMAFAIPFFQQFTGINIVAFYSPNLFQSVGLGNNGALLSAVILGLVNLASILVSTAFVDRFGRRFLFITGGILLLVCLIAVSALLALATGVDGTKDMSKGNATLVLVLLCFYAAGFGWSWGPLTWLIPSEIFPLKIRTTGQSIAVGVQFIILFVLSQTFLTMLCHFKFGAFLFYAFWVAVMTLFIIFFLPETKGIALESMYIIWGKHWYWQRFVKGEVDKNNLP