AlfalfaGEDB | MS.gene35600

M. sativa cultivar XinJiangDaYe / MS.gene35600

KEGG: K24193
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00083.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35600.t1	RHN68609.1	84	507	16	1	1	442	1	507	1.50E-225	792

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35600.t1	Q93Y91	54.2	502	161	4	1	433	1	502	3.4e-138	493.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35600.t1	A0A396ISD9	84.0	507	16	1	1	442	1	507	1.1e-225	792.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene35600	MS.gene031757	PPI
MS.gene35600	MS.gene48433	PPI
MS.gene35600	MS.gene066530	PPI
MS.gene35600	MS.gene04695	PPI
MS.gene35600	MS.gene50065	PPI
MS.gene055946	MS.gene35600	PPI
MS.gene31419	MS.gene35600	PPI
MS.gene35600	MS.gene056687	PPI
MS.gene35600	MS.gene41130	PPI
MS.gene35600	MS.gene56211	PPI
MS.gene35600	MS.gene065799	PPI
MS.gene35600	MS.gene072437	PPI
MS.gene064881	MS.gene35600	PPI
MS.gene35600	MS.gene018060	PPI
MS.gene35600	MS.gene031671	PPI
MS.gene35600	MS.gene04694	PPI
MS.gene066532	MS.gene35600	PPI
MS.gene35600	MS.gene072436	PPI
MS.gene35600	MS.gene78329	PPI
MS.gene35600	MS.gene56212	PPI
MS.gene35600	MS.gene78327	PPI
MS.gene006547	MS.gene35600	PPI
MS.gene04674	MS.gene35600	PPI
MS.gene35600	MS.gene009409	PPI
MS.gene35600	MS.gene72918	PPI
MS.gene35600	MS.gene006634	PPI
MS.gene35600	MS.gene52737	PPI
MS.gene055771	MS.gene35600	PPI
MS.gene25807	MS.gene35600	PPI
MS.gene35600	MS.gene006546	PPI
MS.gene35600	MS.gene052174	PPI
MS.gene35600	MS.gene23356	PPI
MS.gene35600	MS.gene45698	PPI
MS.gene35600	MS.gene66840	PPI
MS.gene35600	MS.gene52719	PPI
MS.gene058372	MS.gene35600	PPI
MS.gene35600	MS.gene50704	PPI
MS.gene35600	MS.gene30558	PPI
MS.gene062929	MS.gene35600	PPI
MS.gene35600	MS.gene003775	PPI
MS.gene35600	MS.gene78328	PPI
MS.gene35600	MS.gene29303	PPI
MS.gene35600	MS.gene004000	PPI
MS.gene065882	MS.gene35600	PPI
MS.gene35600	MS.gene069970	PPI
MS.gene35600	MS.gene044198	PPI
MS.gene35600	MS.gene018043	PPI
MS.gene35600	MS.gene014297	PPI
MS.gene35600	MS.gene013049	PPI
MS.gene29304	MS.gene35600	PPI
MS.gene35600	MS.gene78842	PPI
MS.gene35600	MS.gene003641	PPI
MS.gene70727	MS.gene35600	PPI
MS.gene35600	MS.gene021157	PPI
MS.gene020412	MS.gene35600	PPI
MS.gene35600	MS.gene066531	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35600.t1	MTR_3g074410	65.422	509	109	5	1	442	1	509	0.0	652
MS.gene35600.t1	MTR_3g074390	76.617	402	89	1	1	397	1	402	0.0	635
MS.gene35600.t1	MTR_3g074380	78.415	366	76	2	1	363	1	366	0.0	589
MS.gene35600.t1	MTR_3g074270	61.587	479	138	5	1	434	1	478	0.0	588
MS.gene35600.t1	MTR_3g074340	66.873	323	42	4	185	442	18	340	7.52e-142	409
MS.gene35600.t1	MTR_3g074370	67.183	323	41	4	185	442	18	340	1.14e-141	409
MS.gene35600.t1	MTR_3g074320	66.563	323	43	4	185	442	18	340	3.62e-141	407
MS.gene35600.t1	MTR_3g008160	51.768	396	181	7	8	397	6	397	2.68e-137	404
MS.gene35600.t1	MTR_3g074400	59.207	353	110	5	50	401	1	320	1.06e-132	389
MS.gene35600.t1	MTR_5g082540	48.724	392	195	4	10	397	8	397	3.88e-129	383
MS.gene35600.t1	MTR_5g041550	48.507	402	200	5	1	397	1	400	5.34e-129	383
MS.gene35600.t1	MTR_3g008170	50.754	398	188	6	5	397	4	398	2.32e-128	381
MS.gene35600.t1	MTR_1g038630	47.118	399	207	3	1	397	1	397	3.35e-128	380
MS.gene35600.t1	MTR_5g006070	49.227	388	188	6	15	397	14	397	1.41e-125	374
MS.gene35600.t1	MTR_3g093010	49.118	397	195	5	4	395	3	397	4.48e-124	370
MS.gene35600.t1	MTR_4g091370	51.938	387	180	5	15	397	15	399	9.57e-124	369
MS.gene35600.t1	MTR_0009s0370	47.848	395	198	6	8	397	7	398	9.00e-123	367
MS.gene35600.t1	MTR_4g090600	50.498	402	189	6	7	400	3	402	4.72e-120	360
MS.gene35600.t1	MTR_0204s0020	46.494	385	201	4	12	395	10	390	9.50e-120	358
MS.gene35600.t1	MTR_1g104780	46.517	402	205	7	1	397	1	397	2.56e-118	355
MS.gene35600.t1	MTR_3g008160	50.568	352	166	6	50	397	1	348	1.73e-117	351
MS.gene35600.t1	MTR_3g023480	45.619	388	204	5	15	397	13	398	1.71e-116	350
MS.gene35600.t1	MTR_0204s0020	45.714	385	201	5	12	395	10	387	8.21e-116	348
MS.gene35600.t1	MTR_5g094760	46.392	388	199	5	1	383	1	384	8.25e-115	346
MS.gene35600.t1	MTR_7g091690	46.134	388	200	5	1	383	1	384	1.08e-114	346
MS.gene35600.t1	MTR_1g038600	44.081	397	204	4	1	397	1	379	4.46e-114	344
MS.gene35600.t1	MTR_1g104770	43.890	401	218	5	1	397	1	398	2.32e-113	342
MS.gene35600.t1	MTR_1g104750	44.888	401	213	6	1	397	1	397	4.27e-113	342
MS.gene35600.t1	MTR_0204s0040	42.893	394	220	4	3	395	9	398	9.67e-113	341
MS.gene35600.t1	MTR_4g116790	44.875	361	196	3	3	362	7	365	1.09e-111	334
MS.gene35600.t1	MTR_6g087040	46.782	404	204	8	1	397	1	400	2.03e-111	337
MS.gene35600.t1	MTR_6g088375	46.782	404	204	8	1	397	1	400	2.03e-111	337
MS.gene35600.t1	MTR_4g116790	43.832	381	209	4	3	382	7	383	8.04e-111	336
MS.gene35600.t1	MTR_8g102860	47.287	387	196	8	15	397	18	400	8.37e-111	336
MS.gene35600.t1	MTR_4g116770	42.893	394	220	4	3	395	205	594	1.39e-110	341
MS.gene35600.t1	MTR_3g093060	47.727	352	176	5	50	395	1	350	8.68e-110	332
MS.gene35600.t1	MTR_5g006070	47.592	353	176	6	50	397	1	349	2.16e-107	326
MS.gene35600.t1	MTR_3g007910	45.823	395	179	7	4	395	3	365	1.70e-106	324
MS.gene35600.t1	MTR_8g102860	47.159	352	178	8	50	397	1	348	1.75e-97	300
MS.gene35600.t1	MTR_3g074330	91.139	158	7	1	1	151	1	158	6.74e-93	278
MS.gene35600.t1	MTR_3g074360	91.139	158	7	1	1	151	1	158	6.74e-93	278
MS.gene35600.t1	MTR_3g074310	90.506	158	8	1	1	151	1	158	3.87e-92	276
MS.gene35600.t1	MTR_5g096000	52.047	171	64	1	4	174	3	155	8.49e-47	164
MS.gene35600.t1	MTR_4g072030	27.855	359	219	7	27	365	31	369	2.99e-38	145
MS.gene35600.t1	MTR_2g013310	29.859	355	221	6	24	369	53	388	1.65e-37	143
MS.gene35600.t1	MTR_4g069500	28.889	360	215	7	27	365	34	373	2.99e-37	142
MS.gene35600.t1	MTR_6g088450	27.806	392	249	9	28	410	63	429	3.80e-37	142
MS.gene35600.t1	MTR_2g013310	31.724	290	190	3	88	369	26	315	4.43e-37	141
MS.gene35600.t1	MTR_4g069500	31.525	295	180	5	92	365	30	323	5.57e-37	141
MS.gene35600.t1	MTR_8g103500	26.741	359	225	7	18	361	13	348	1.04e-36	140
MS.gene35600.t1	MTR_0064s0040	48.322	149	64	2	4	151	5	141	1.76e-35	129
MS.gene35600.t1	MTR_3g116240	27.978	361	219	9	27	365	32	373	1.77e-35	137
MS.gene35600.t1	MTR_8g077890	25.726	482	254	13	28	425	24	485	9.05e-35	135
MS.gene35600.t1	MTR_2g049020	31.897	348	195	11	34	364	37	359	1.75e-34	135
MS.gene35600.t1	MTR_7g446340	27.778	360	232	7	20	370	51	391	6.45e-34	133
MS.gene35600.t1	MTR_6g007340	27.778	360	232	7	20	370	51	391	6.45e-34	133
MS.gene35600.t1	MTR_2g048720	30.746	335	207	8	34	361	37	353	4.38e-33	131
MS.gene35600.t1	MTR_7g082270	27.019	359	239	6	9	365	51	388	1.66e-32	129
MS.gene35600.t1	MTR_7g082270	27.035	344	230	5	9	352	51	373	3.27e-32	128
MS.gene35600.t1	MTR_6g018790	27.300	337	224	5	16	352	98	413	5.50e-32	128
MS.gene35600.t1	MTR_7g094450	27.182	401	223	9	79	418	77	469	2.21e-30	122
MS.gene35600.t1	MTR_2g026160	27.989	368	223	8	34	385	38	379	1.02e-29	122
MS.gene35600.t1	MTR_5g075300	26.087	391	245	10	28	397	24	391	1.79e-29	120
MS.gene35600.t1	MTR_8g077300	26.910	301	213	2	82	382	79	372	5.02e-29	119
MS.gene35600.t1	MTR_8g077310	28.521	284	196	2	82	365	87	363	7.64e-29	117
MS.gene35600.t1	MTR_8g077310	28.521	284	196	2	82	365	87	363	1.26e-28	118
MS.gene35600.t1	MTR_7g094110	28.042	378	223	8	82	418	82	451	1.55e-28	117
MS.gene35600.t1	MTR_8g077310	28.205	273	189	2	93	365	1	266	1.06e-27	114
MS.gene35600.t1	MTR_3g080240	26.765	340	223	8	28	364	98	414	1.26e-27	115
MS.gene35600.t1	MTR_5g077580	27.701	361	189	8	34	349	37	370	1.50e-27	115
MS.gene35600.t1	MTR_7g113970	25.914	301	212	5	82	381	102	392	3.89e-27	112
MS.gene35600.t1	MTR_4g077740	25.000	344	234	7	22	353	44	375	4.11e-27	114
MS.gene35600.t1	MTR_7g113970	25.914	301	212	5	82	381	102	392	4.77e-27	113
MS.gene35600.t1	MTR_7g094110	28.114	281	193	3	82	361	82	354	1.83e-26	111
MS.gene35600.t1	MTR_5g019870	26.733	303	200	6	75	356	49	350	2.43e-26	111
MS.gene35600.t1	MTR_3g084110	26.234	385	239	11	34	408	39	388	2.69e-26	111
MS.gene35600.t1	MTR_2g020710	27.341	267	185	5	82	347	89	347	2.97e-26	109
MS.gene35600.t1	MTR_2g020710	27.341	267	185	5	82	347	89	347	2.99e-26	110
MS.gene35600.t1	MTR_2g020710	27.444	266	184	5	83	347	1	258	3.37e-26	109
MS.gene35600.t1	MTR_2g020710	27.509	269	186	5	82	349	89	349	3.54e-26	110
MS.gene35600.t1	MTR_7g113960	26.667	270	190	3	82	351	67	328	4.89e-26	109
MS.gene35600.t1	MTR_2g020710	27.341	267	185	5	82	347	89	347	6.34e-26	110
MS.gene35600.t1	MTR_1g022315	26.408	284	202	2	82	365	89	365	7.53e-26	110
MS.gene35600.t1	MTR_7g113960	26.667	270	190	3	82	351	67	328	8.57e-26	109
MS.gene35600.t1	MTR_1g038620	35.625	160	84	3	201	360	50	190	1.14e-25	103
MS.gene35600.t1	MTR_1g022315	26.007	273	195	2	93	365	1	266	3.84e-25	106
MS.gene35600.t1	MTR_7g005910	27.859	341	224	8	29	365	39	361	4.44e-25	107
MS.gene35600.t1	MTR_5g020270	26.408	284	202	2	82	365	90	366	3.75e-24	105
MS.gene35600.t1	MTR_4g064820	26.796	362	234	7	22	366	95	442	7.48e-24	104
MS.gene35600.t1	MTR_2g026140	27.378	347	212	8	29	365	30	346	1.95e-23	103
MS.gene35600.t1	MTR_1g116660	24.870	386	253	9	29	408	41	395	2.07e-23	102
MS.gene35600.t1	MTR_5g020270	26.007	273	195	2	93	365	1	266	2.78e-23	101
MS.gene35600.t1	MTR_4g118610	24.164	269	195	5	82	349	92	352	3.10e-23	101
MS.gene35600.t1	MTR_4g118610	24.164	269	195	5	82	349	92	352	6.34e-23	101
MS.gene35600.t1	MTR_1g116650	26.629	353	209	10	25	365	78	392	1.47e-21	97.4
MS.gene35600.t1	MTR_4g013205	23.547	327	222	5	28	351	41	342	1.50e-21	97.1
MS.gene35600.t1	MTR_6g087910	22.481	258	195	3	92	349	102	354	2.78e-21	96.7
MS.gene35600.t1	MTR_5g020270	25.763	295	198	5	82	364	90	375	5.10e-20	92.4
MS.gene35600.t1	MTR_4g069500	30.435	184	106	5	202	365	3	184	6.17e-17	82.0
MS.gene35600.t1	MTR_3g116060	28.655	171	119	3	90	258	52	221	1.48e-15	79.3
MS.gene35600.t1	MTR_3g118530	28.655	171	119	3	90	258	54	223	9.32e-15	77.0
MS.gene35600.t1	MTR_3g118530	28.655	171	119	3	90	258	54	223	1.99e-14	75.9
MS.gene35600.t1	MTR_5g024740	26.141	241	146	8	21	253	2	218	2.33e-14	75.9
MS.gene35600.t1	MTR_5g044910	28.324	173	121	3	83	253	47	218	7.55e-14	74.3
MS.gene35600.t1	MTR_8g073100	27.174	184	121	4	77	253	41	218	2.22e-12	69.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35600.t1	AT1G34580	62.095	401	148	3	1	397	1	401	1.47e-170	488
MS.gene35600.t1	AT1G34580	60.684	351	135	2	50	397	1	351	8.02e-145	421
MS.gene35600.t1	AT3G19930	51.385	397	188	4	4	397	3	397	8.72e-136	400
MS.gene35600.t1	AT3G19930	51.385	397	188	4	4	397	3	397	8.72e-136	400
MS.gene35600.t1	AT1G11260	50.623	401	192	5	1	397	1	399	2.86e-135	399
MS.gene35600.t1	AT4G21480	51.128	399	191	4	1	397	1	397	3.06e-133	393
MS.gene35600.t1	AT5G23270	50.495	404	189	7	1	397	1	400	1.37e-130	387
MS.gene35600.t1	AT3G19940	50.914	383	180	5	19	397	21	399	1.59e-126	376
MS.gene35600.t1	AT1G50310	50.000	382	186	5	19	397	21	400	9.79e-125	372
MS.gene35600.t1	AT5G26340	47.631	401	203	5	1	397	1	398	4.03e-123	368
MS.gene35600.t1	AT4G02050	45.500	400	209	5	1	395	1	396	4.05e-118	355
MS.gene35600.t1	AT4G02050	45.500	400	209	5	1	395	1	396	4.05e-118	355
MS.gene35600.t1	AT5G61520	46.175	366	187	5	17	375	18	380	1.63e-115	348
MS.gene35600.t1	AT5G26250	45.405	370	199	3	9	377	8	375	1.94e-110	335
MS.gene35600.t1	AT3G05960	44.595	370	202	3	9	377	7	374	5.23e-107	326
MS.gene35600.t1	AT1G07340	43.750	400	217	5	1	397	1	395	5.76e-106	323
MS.gene35600.t1	AT1G77210	42.643	401	220	7	1	395	1	397	2.65e-105	322
MS.gene35600.t1	AT1G77210	42.643	401	220	7	1	395	1	397	2.65e-105	322
MS.gene35600.t1	AT5G61520	44.611	334	175	5	49	375	2	332	5.67e-100	306
MS.gene35600.t1	AT1G50310	47.390	249	127	4	151	397	11	257	1.25e-72	233
MS.gene35600.t1	AT1G77210	39.271	247	144	5	151	395	6	248	6.24e-56	189
MS.gene35600.t1	AT3G18830	28.056	360	219	7	27	365	40	380	1.00e-37	144
MS.gene35600.t1	AT2G16120	28.889	360	216	9	27	365	30	370	1.65e-36	140
MS.gene35600.t1	AT2G16130	29.565	345	205	8	27	352	30	355	3.01e-36	140
MS.gene35600.t1	AT2G18480	29.714	350	206	8	37	365	36	366	1.83e-35	137
MS.gene35600.t1	AT2G20780	27.479	353	230	7	20	365	51	384	6.06e-34	133
MS.gene35600.t1	AT1G30220	31.385	325	198	7	34	351	39	345	8.37e-34	134
MS.gene35600.t1	AT5G16150	27.059	340	221	5	16	352	98	413	2.21e-33	132
MS.gene35600.t1	AT5G16150	27.059	340	221	5	16	352	98	413	2.21e-33	132
MS.gene35600.t1	AT5G16150	27.059	340	221	5	16	352	98	413	2.21e-33	132
MS.gene35600.t1	AT2G20780	28.772	285	197	3	87	365	42	326	5.75e-33	130
MS.gene35600.t1	AT4G36670	27.100	369	227	8	27	373	21	369	5.63e-32	127
MS.gene35600.t1	AT4G16480	30.387	362	209	10	34	378	38	373	5.90e-32	128
MS.gene35600.t1	AT4G16480	30.387	362	209	10	34	378	38	373	5.90e-32	128
MS.gene35600.t1	AT4G16480	30.387	362	209	10	34	378	38	373	5.90e-32	128
MS.gene35600.t1	AT2G48020	27.915	283	195	3	82	363	68	342	6.42e-32	125
MS.gene35600.t1	AT2G48020	27.915	283	195	3	82	363	68	342	1.36e-31	126
MS.gene35600.t1	AT2G48020	27.915	283	195	3	82	363	68	342	1.36e-31	126
MS.gene35600.t1	AT1G54730	28.399	331	194	9	29	351	38	333	1.69e-31	123
MS.gene35600.t1	AT1G54730	26.471	374	242	8	29	401	38	379	2.70e-31	125
MS.gene35600.t1	AT3G05160	26.519	362	217	6	16	365	14	338	3.07e-31	125
MS.gene35600.t1	AT1G54730	28.399	331	194	9	29	351	38	333	3.91e-31	124
MS.gene35600.t1	AT1G54730	28.399	331	194	9	29	351	38	333	3.91e-31	124
MS.gene35600.t1	AT1G75220	26.316	361	240	4	20	380	45	379	5.49e-31	124
MS.gene35600.t1	AT1G54730	26.471	374	242	8	29	401	38	379	8.19e-31	124
MS.gene35600.t1	AT1G08930	27.520	367	223	9	8	368	42	371	1.12e-30	124
MS.gene35600.t1	AT1G08930	27.520	367	223	9	8	368	42	371	1.12e-30	124
MS.gene35600.t1	AT2G48020	27.407	270	188	2	82	351	68	329	1.32e-30	121
MS.gene35600.t1	AT1G54730	27.852	298	191	4	29	326	38	311	3.96e-30	119
MS.gene35600.t1	AT1G54730	27.852	298	191	4	29	326	38	311	3.96e-30	119
MS.gene35600.t1	AT1G54730	28.758	306	178	7	29	326	38	311	9.25e-30	120
MS.gene35600.t1	AT1G54730	27.852	298	191	5	29	326	38	311	1.08e-29	120
MS.gene35600.t1	AT3G05160	27.891	294	182	4	84	365	14	289	1.31e-29	119
MS.gene35600.t1	AT3G05160	27.891	294	182	4	84	365	14	289	1.31e-29	119
MS.gene35600.t1	AT3G05165	26.243	362	218	6	16	365	23	347	1.48e-29	120
MS.gene35600.t1	AT3G05165	26.243	362	218	6	16	365	23	347	1.48e-29	120
MS.gene35600.t1	AT3G05400	28.975	283	188	5	82	361	66	338	1.64e-29	120
MS.gene35600.t1	AT3G05165	26.243	362	218	6	16	365	23	347	1.88e-29	120
MS.gene35600.t1	AT1G54730	28.758	306	178	8	29	326	38	311	2.10e-29	119
MS.gene35600.t1	AT3G05165	26.243	362	218	6	16	365	23	347	2.51e-29	119
MS.gene35600.t1	AT3G05165	26.243	362	218	6	16	365	23	347	2.51e-29	119
MS.gene35600.t1	AT3G05165	26.243	362	218	6	16	365	23	347	2.51e-29	119
MS.gene35600.t1	AT1G19450	26.039	361	241	4	20	380	46	380	1.09e-28	118
MS.gene35600.t1	AT1G08900	26.019	319	218	4	82	397	23	326	1.77e-28	116
MS.gene35600.t1	AT2G35740	27.920	351	211	9	34	367	37	362	1.88e-28	118
MS.gene35600.t1	AT1G08900	26.415	318	218	5	82	397	65	368	2.46e-28	116
MS.gene35600.t1	AT3G05400	32.400	250	155	6	116	361	79	318	3.24e-28	116
MS.gene35600.t1	AT5G17010	25.966	466	265	11	21	418	45	498	3.30e-28	117
MS.gene35600.t1	AT5G17010	25.966	466	265	11	21	418	45	498	3.30e-28	117
MS.gene35600.t1	AT5G17010	25.966	466	265	11	21	418	45	498	3.30e-28	117
MS.gene35600.t1	AT1G08900	26.019	319	218	4	82	397	57	360	3.66e-28	116
MS.gene35600.t1	AT1G08900	26.019	319	218	4	82	397	65	368	4.29e-28	116
MS.gene35600.t1	AT1G08900	26.019	319	218	4	82	397	65	368	4.29e-28	116
MS.gene35600.t1	AT5G27350	25.215	349	231	6	16	362	24	344	2.87e-27	114
MS.gene35600.t1	AT1G67300	27.368	285	191	6	92	373	103	374	4.48e-26	110
MS.gene35600.t1	AT1G67300	27.368	285	191	6	92	373	103	374	4.48e-26	110
MS.gene35600.t1	AT3G05150	28.859	298	196	4	82	374	75	361	6.24e-26	110
MS.gene35600.t1	AT1G67300	27.368	285	191	6	92	373	103	374	6.26e-26	109
MS.gene35600.t1	AT1G67300	27.368	285	191	6	92	373	103	374	6.26e-26	109
MS.gene35600.t1	AT3G05150	28.859	298	196	4	82	374	75	361	6.54e-26	110
MS.gene35600.t1	AT3G05150	28.859	298	196	4	82	374	75	361	6.54e-26	110
MS.gene35600.t1	AT1G67300	27.368	285	191	6	92	373	103	374	7.18e-26	110
MS.gene35600.t1	AT1G67300	27.368	285	191	6	92	373	103	374	7.18e-26	110
MS.gene35600.t1	AT5G27360	23.009	339	230	4	16	352	28	337	1.12e-25	108
MS.gene35600.t1	AT5G27360	23.009	339	230	4	16	352	28	337	1.75e-25	108
MS.gene35600.t1	AT1G67300	27.174	276	192	5	92	364	103	372	2.06e-25	108
MS.gene35600.t1	AT4G04760	28.889	270	181	4	82	348	71	332	2.32e-25	108
MS.gene35600.t1	AT4G04760	28.521	284	191	5	82	361	12	287	2.50e-25	107
MS.gene35600.t1	AT5G27360	23.324	343	224	5	16	352	76	385	2.58e-25	108
MS.gene35600.t1	AT3G05155	24.615	325	223	8	82	405	67	370	4.19e-25	107
MS.gene35600.t1	AT4G04760	28.521	284	191	5	82	361	71	346	5.35e-25	107
MS.gene35600.t1	AT5G59250	26.801	347	227	7	22	353	97	431	5.36e-25	108
MS.gene35600.t1	AT1G05030	23.885	381	260	9	21	398	77	430	6.82e-25	107
MS.gene35600.t1	AT3G05155	24.354	271	192	4	82	351	67	325	7.50e-25	104
MS.gene35600.t1	AT1G79820	25.449	334	207	9	28	351	59	360	1.55e-24	105
MS.gene35600.t1	AT3G20460	26.690	281	194	5	82	361	93	362	1.69e-24	106
MS.gene35600.t1	AT1G79820	25.449	334	207	9	28	351	59	360	2.00e-24	105
MS.gene35600.t1	AT1G79820	25.449	334	207	9	28	351	59	360	2.00e-24	105
MS.gene35600.t1	AT1G08890	26.984	315	216	5	82	395	67	368	2.71e-24	105
MS.gene35600.t1	AT1G05030	24.684	316	224	6	87	398	73	378	6.83e-24	104
MS.gene35600.t1	AT4G04750	27.148	291	200	4	82	368	76	358	1.07e-23	103
MS.gene35600.t1	AT4G04750	27.148	291	200	4	82	368	76	358	1.07e-23	103
MS.gene35600.t1	AT4G04750	27.148	291	200	4	82	368	120	402	1.21e-23	103
MS.gene35600.t1	AT3G03090	25.221	452	258	11	35	418	59	498	7.26e-23	101
MS.gene35600.t1	AT5G27360	25.877	228	153	3	129	352	18	233	1.08e-22	99.4
MS.gene35600.t1	AT5G27360	25.877	228	153	3	129	352	18	233	1.08e-22	99.4
MS.gene35600.t1	AT1G08920	25.714	280	190	6	82	355	72	339	2.69e-22	99.4
MS.gene35600.t1	AT1G08920	23.913	276	200	3	82	355	72	339	3.56e-22	99.0
MS.gene35600.t1	AT5G18840	25.000	288	208	4	82	368	84	364	8.16e-22	98.2
MS.gene35600.t1	AT1G08920	25.182	274	189	5	82	351	72	333	8.88e-22	97.8
MS.gene35600.t1	AT2G43330	26.420	352	221	9	27	365	35	361	1.48e-21	97.4
MS.gene35600.t1	AT3G51490	30.851	188	126	4	87	272	2	187	5.17e-20	93.2
MS.gene35600.t1	AT3G51490	30.851	188	126	4	87	272	52	237	6.07e-20	93.2
MS.gene35600.t1	AT5G17010	24.775	444	238	12	21	418	42	435	6.12e-20	92.0
MS.gene35600.t1	AT3G51490	30.851	188	126	4	87	272	52	237	6.19e-20	93.2
MS.gene35600.t1	AT1G20840	26.178	191	138	3	90	278	52	241	4.02e-16	81.3
MS.gene35600.t1	AT1G20840	26.178	191	138	3	90	278	52	241	4.02e-16	81.3
MS.gene35600.t1	AT1G79820	24.138	261	164	6	28	280	59	293	5.25e-16	80.1
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	5.57e-16	80.9
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	5.57e-16	80.9
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	5.57e-16	80.9
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	6.77e-16	80.5
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	6.77e-16	80.5
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	6.77e-16	80.5
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	6.77e-16	80.5
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	6.77e-16	80.5
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	6.77e-16	80.5
MS.gene35600.t1	AT4G35300	31.609	174	115	4	87	258	52	223	6.77e-16	80.5
MS.gene35600.t1	AT1G79820	26.829	164	103	4	125	280	77	231	1.78e-11	65.9

Find 99 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGAGTCAATGTACATTATA+TGG	0.160882	3.3:+64143488	MS.gene35600:CDS
CTTGCTGGTGCTGCTATTAA+TGG	0.178937	3.3:+64141868	MS.gene35600:CDS
GCAGCCTTTCTTAGAATATC+TGG	0.181761	3.3:-64141685	None:intergenic
GGTCGTATTCTTCTTGGTTT+TGG	0.185325	3.3:+64141922	MS.gene35600:CDS
GGATATGACATTGGGATTTC+AGG	0.189475	3.3:+64141153	MS.gene35600:CDS
TTACTTTCTGCCGTTATTCT+TGG	0.197875	3.3:+64142778	MS.gene35600:CDS
ATCCTTGGTCGTATTCTTCT+TGG	0.222527	3.3:+64141916	MS.gene35600:CDS
ACGGGCTTCCAATTCTTCTT+AGG	0.243749	3.3:+64142331	MS.gene35600:CDS
CTGAAATTGCTCCACCAAAA+TGG	0.273388	3.3:+64142293	MS.gene35600:CDS
CTCTTTCAATCTGTGGGTTT+AGG	0.277247	3.3:+64142742	MS.gene35600:CDS
CTGAAAGCACCTCGCCATTT+TGG	0.278725	3.3:-64142307	None:intergenic
GGTGGTGCCATCTTTCTTGC+TGG	0.282200	3.3:+64141853	MS.gene35600:CDS
CTCTCAAATATGGTCATAAA+TGG	0.289729	3.3:-64142628	None:intergenic
TCTGCAATGCTTTCCTGGCT+TGG	0.290814	3.3:-64142519	None:intergenic
TATGGGGCAAACATTGGTTT+TGG	0.323870	3.3:+64143506	MS.gene35600:CDS
CGAAGATTCTTGTTCATTAC+GGG	0.351064	3.3:+64142856	MS.gene35600:CDS
CGACAACTCCTAAGAAGAAT+TGG	0.353486	3.3:-64142339	None:intergenic
GATGGCACCACCCAACATTA+TGG	0.359537	3.3:-64141842	None:intergenic
GCCACGTTCAACCAAGCTGC+TGG	0.360284	3.3:-64142488	None:intergenic
TCGATATTGTCTCTCAAATA+TGG	0.363219	3.3:-64142638	None:intergenic
GGAGTCAATGTACATTATAT+GGG	0.376356	3.3:+64143489	MS.gene35600:CDS
ACGAAGATTCTTGTTCATTA+CGG	0.390145	3.3:+64142855	MS.gene35600:CDS
CATTCTAATGCTTGTCTGCC+TGG	0.399154	3.3:+64142882	MS.gene35600:CDS
GGGAAGAATTTATTGAGAAA+TGG	0.402684	3.3:-64141664	None:intergenic
GGGCAACGCAACATTGGTAT+TGG	0.408706	3.3:+64143195	MS.gene35600:CDS
TGGGGCTGGCGACTCTCTCT+TGG	0.414296	3.3:+64142406	MS.gene35600:CDS
TGACTCCAAAGCAATTCCTT+TGG	0.421772	3.3:-64143473	None:intergenic
CTTCCCAGATATTCTAAGAA+AGG	0.422736	3.3:+64141681	MS.gene35600:CDS
AAAGCAATTCCTTTGGTCTC+AGG	0.428168	3.3:-64143466	None:intergenic
CCCACAGATTGAAAGAGGTT+TGG	0.431157	3.3:-64142736	None:intergenic
TGAGACCAAAGGAATTGCTT+TGG	0.446229	3.3:+64143468	MS.gene35600:CDS
CCTGCAGCCGTGATGACAAT+TGG	0.446393	3.3:+64142442	MS.gene35600:CDS
AAGGTTGAAAATGGCAGGTG+GGG	0.448174	3.3:+64141032	None:intergenic
CTAAACCCACAGATTGAAAG+AGG	0.452624	3.3:-64142741	None:intergenic
GCTTTGACGACTGGTATTCA+TGG	0.460359	3.3:+64143154	MS.gene35600:CDS
AATATTGTTATGCTCATCCT+TGG	0.469597	3.3:+64141901	MS.gene35600:CDS
GGAGTTGTCGTGGTTGCTGC+AGG	0.471280	3.3:+64142352	MS.gene35600:CDS
GCAATTTCAGAAAGGTATAG+TGG	0.472124	3.3:-64142280	None:intergenic
CCAAACCTCTTTCAATCTGT+GGG	0.474306	3.3:+64142736	MS.gene35600:CDS
GCCATTCGAAGGTGCATCAA+TGG	0.477746	3.3:-64141061	None:intergenic
CCAATTGTCATCACGGCTGC+AGG	0.478121	3.3:-64142442	None:intergenic
TCGCCAGCCCCATGTGTGCT+TGG	0.478528	3.3:-64142395	None:intergenic
ACCAAACCTCTTTCAATCTG+TGG	0.482629	3.3:+64142735	MS.gene35600:CDS
TGTATTGTTGCTGCATCTAG+TGG	0.488167	3.3:+64141120	MS.gene35600:CDS
ACGCGACCGCCAAGCACACA+TGG	0.491049	3.3:+64142386	MS.gene35600:CDS
CCGCCAAGCACACATGGGGC+TGG	0.492419	3.3:+64142392	MS.gene35600:CDS
GCTTTGCTAGCTTTGACGAC+TGG	0.494629	3.3:+64143145	MS.gene35600:CDS
TGGCGAGGTGCTTTCAGCAC+GGG	0.494901	3.3:+64142313	MS.gene35600:CDS
TTACTATGTTTCTATGCCGC+AGG	0.496329	3.3:+64143220	MS.gene35600:CDS
GCCATTGATGCACCTTCGAA+TGG	0.498649	3.3:+64141060	MS.gene35600:CDS
CAGCCTTTCTTAGAATATCT+GGG	0.503890	3.3:-64141684	None:intergenic
AGGTTGAAAATGGCAGGTGG+GGG	0.513919	3.3:+64141033	None:intergenic
CAACAAAAGCAGTTGAGACT+AGG	0.518496	3.3:-64142822	None:intergenic
CAAGGTTGAAAATGGCAGGT+GGG	0.519890	3.3:+64141031	None:intergenic
ATCCTCCATCGATGTTGAGC+CGG	0.528672	3.3:+64142552	MS.gene35600:CDS
TGCTGGGTGTGTCGGATATG+AGG	0.531185	3.3:-64142471	None:intergenic
CCAGCCCCATGTGTGCTTGG+CGG	0.531705	3.3:-64142392	None:intergenic
CCACGTTCAACCAAGCTGCT+GGG	0.533955	3.3:-64142487	None:intergenic
ACATTATATGGGGCAAACAT+TGG	0.535333	3.3:+64143500	MS.gene35600:CDS
AGTTAAAAGAACTCATTAAG+TGG	0.535827	3.3:+64142575	MS.gene35600:CDS
AGGACAAGGTTGAAAATGGC+AGG	0.542297	3.3:+64141027	None:intergenic
AACCAAGCTGCTGGGTGTGT+CGG	0.542991	3.3:-64142479	None:intergenic
TGTTAAAGGAGAAGTTGAGA+AGG	0.546071	3.3:+64143537	MS.gene35600:CDS
AGCAGCACCAGCAAGAAAGA+TGG	0.549935	3.3:-64141860	None:intergenic
AGCAAAGTCACTGCAGCTAT+CGG	0.550701	3.3:+64141808	MS.gene35600:CDS
GCACCTTCGAATGGCTTCGA+CGG	0.551765	3.3:+64141069	MS.gene35600:CDS
ATATCGACCTCACTTAATCA+TGG	0.560389	3.3:+64142654	MS.gene35600:CDS
ATCCGACACACCCAGCAGCT+TGG	0.562187	3.3:+64142477	MS.gene35600:CDS
TTGGTGGAGCAATTTCAGAA+AGG	0.562320	3.3:-64142288	None:intergenic
TGGTACAAAGGACATGTCAA+AGG	0.564689	3.3:+64143174	MS.gene35600:CDS
TAACTCCGGCTCAACATCGA+TGG	0.564960	3.3:-64142557	None:intergenic
GTGGCAAGATAGACCAAGCC+AGG	0.572272	3.3:+64142506	MS.gene35600:CDS
GGTACAAAGGACATGTCAAA+GGG	0.573765	3.3:+64143175	MS.gene35600:CDS
GTCAAAGGGCAACGCAACAT+TGG	0.579145	3.3:+64143189	MS.gene35600:CDS
GCTGGTGCTGCTATTAATGG+AGG	0.590975	3.3:+64141871	MS.gene35600:CDS
CGCGACCGCCAAGCACACAT+GGG	0.593701	3.3:+64142387	MS.gene35600:CDS
GGTTGAAAATGGCAGGTGGG+GGG	0.597159	3.3:+64141034	None:intergenic
GAGTCAATGTACATTATATG+GGG	0.599950	3.3:+64143490	MS.gene35600:CDS
ATTCTTCTTAGGAGTTGTCG+TGG	0.600354	3.3:+64142342	MS.gene35600:CDS
ATGGCGAGGTGCTTTCAGCA+CGG	0.604150	3.3:+64142312	MS.gene35600:CDS
GATATTCTAAGAAAGGCTGC+TGG	0.607230	3.3:+64141688	MS.gene35600:CDS
CCCAGCAGCTTGGTTGAACG+TGG	0.607250	3.3:+64142487	MS.gene35600:CDS
TTTCCGTCGAAGCCATTCGA+AGG	0.608818	3.3:-64141072	None:intergenic
GTTGACGAGTCCAAGAATAA+CGG	0.609102	3.3:-64142788	None:intergenic
CTCCGGCTCAACATCGATGG+AGG	0.617782	3.3:-64142554	None:intergenic
AGATTCTTGTTCATTACGGG+TGG	0.620505	3.3:+64142859	MS.gene35600:CDS
GAAGGCACCAATTGTCATCA+CGG	0.622211	3.3:-64142449	None:intergenic
ACTCTCTCTTGGACTAGCAG+TGG	0.636345	3.3:+64142417	MS.gene35600:CDS
ACAAGGTTGAAAATGGCAGG+TGG	0.636451	3.3:+64141030	None:intergenic
TTCAGGAGGTGTTACAACAA+TGG	0.637356	3.3:+64141639	MS.gene35600:intron
AAAGCATTGCAGAAAATCAG+AGG	0.644118	3.3:+64142529	MS.gene35600:CDS
GACTGGTATTCATGGTACAA+AGG	0.648697	3.3:+64143162	MS.gene35600:CDS
GCAAATGCCATGATTAAGTG+AGG	0.668086	3.3:-64142661	None:intergenic
GCGACCGCCAAGCACACATG+GGG	0.668399	3.3:+64142388	MS.gene35600:CDS
GGGTGTGTCGGATATGAGGA+AGG	0.669650	3.3:-64142467	None:intergenic
ATTGCTCCACCAAAATGGCG+AGG	0.680520	3.3:+64142298	MS.gene35600:CDS
TTGAGACTAGGATAGAAGCA+AGG	0.681588	3.3:-64142810	None:intergenic
AACCAAGAAGAATACGACCA+AGG	0.682921	3.3:-64141918	None:intergenic
TCTGTGGGTTTAGGAAACAA+CGG	0.704878	3.3:+64142751	MS.gene35600:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATAACTAAAGAATTAAAT+TGG	+	chr3.3:64141398-64141417	MS.gene35600:intron	10.0%
!!	CTAAAAGTTAAATTAAAAAA+GGG	-	chr3.3:64142066-64142085	None:intergenic	10.0%
!!	TAAAAGTTAAATTAAAAAAG+GGG	-	chr3.3:64142065-64142084	None:intergenic	10.0%
!!	TAAATAATATTATACACATA+TGG	-	chr3.3:64142924-64142943	None:intergenic	10.0%
!!	TTTATAATGAAAAAACAAAA+AGG	-	chr3.3:64141186-64141205	None:intergenic	10.0%
!!	GCTAAAAGTTAAATTAAAAA+AGG	-	chr3.3:64142067-64142086	None:intergenic	15.0%
!!!	AACATTTTTCATTAGTAAAA+AGG	-	chr3.3:64141613-64141632	None:intergenic	15.0%
!!!	AAGCAAATTTATTTTAAACA+TGG	-	chr3.3:64142222-64142241	None:intergenic	15.0%
!!!	ACATTTTTCATTAGTAAAAA+GGG	-	chr3.3:64141612-64141631	None:intergenic	15.0%
!!!	AGTAGCAATATTTTAAATAA+AGG	-	chr3.3:64142181-64142200	None:intergenic	15.0%
!!!	TAATGATTTTGACATTTTAT+AGG	-	chr3.3:64141474-64141493	None:intergenic	15.0%
!!!	TTTTATCTTCAAAATTTACT+TGG	+	chr3.3:64141561-64141580	MS.gene35600:intron	15.0%
!!	ACATAAAAATCATAATGTTG+TGG	+	chr3.3:64142137-64142156	MS.gene35600:intron	20.0%
!!	TAAATTAAAAAAGGGGAAAA+TGG	-	chr3.3:64142058-64142077	None:intergenic	20.0%
!!	TGAAAAATGTTATCAAATTC+AGG	+	chr3.3:64141622-64141641	MS.gene35600:intron	20.0%
!!!	AAAACATTTTCTCTCATTTT+GGG	-	chr3.3:64141273-64141292	None:intergenic	20.0%
!!!	AACATGTCTATTTAAAATTG+TGG	-	chr3.3:64142089-64142108	None:intergenic	20.0%
!!!	TAAAACATTTTCTCTCATTT+TGG	-	chr3.3:64141274-64141293	None:intergenic	20.0%
!	AAAATGTTATCAAATTCAGG+AGG	+	chr3.3:64141625-64141644	MS.gene35600:intron	25.0%
!	AGTTAAAAGAACTCATTAAG+TGG	+	chr3.3:64142575-64142594	MS.gene35600:CDS	25.0%
!	ATTGTATTACATGATGCAAT+TGG	+	chr3.3:64142246-64142265	MS.gene35600:intron	25.0%
!	GTCAAAATCATTAGAGTAAT+GGG	+	chr3.3:64141481-64141500	MS.gene35600:intron	25.0%
!	TAAAGGATGCTATCAAAATT+TGG	-	chr3.3:64142164-64142183	None:intergenic	25.0%
!	TAGACGGAGAAATTAAAATA+AGG	-	chr3.3:64143055-64143074	None:intergenic	25.0%
!	TGTCAAAATCATTAGAGTAA+TGG	+	chr3.3:64141480-64141499	MS.gene35600:intron	25.0%
!!	TTTCTTGTTCTATGCATTTT+GGG	+	chr3.3:64143408-64143427	MS.gene35600:intron	25.0%
!!!	TCATTTTTGGATATGACATT+GGG	+	chr3.3:64141145-64141164	MS.gene35600:CDS	25.0%
!!!	TTAATGAGTTCTTTTAACTC+CGG	-	chr3.3:64142574-64142593	None:intergenic	25.0%
	AAATAACGACAGAAAGATTG+CGG	+	chr3.3:64142997-64143016	MS.gene35600:intron	30.0%
	AATATTGTTATGCTCATCCT+TGG	+	chr3.3:64141901-64141920	MS.gene35600:CDS	30.0%
	ACGAAGATTCTTGTTCATTA+CGG	+	chr3.3:64142855-64142874	MS.gene35600:CDS	30.0%
	AGCAAAAAACATGCTCTAAT+TGG	-	chr3.3:64141213-64141232	None:intergenic	30.0%
	CCTGTAAACTGTTGAAAAAA+CGG	-	chr3.3:64142691-64142710	None:intergenic	30.0%
	CGAAAAAACACCATAATGTT+GGG	+	chr3.3:64141832-64141851	MS.gene35600:CDS	30.0%
	CTCTCAAATATGGTCATAAA+TGG	-	chr3.3:64142631-64142650	None:intergenic	30.0%
	CTGTAAACTGTTGAAAAAAC+GGG	-	chr3.3:64142690-64142709	None:intergenic	30.0%
	GAATTAAATTGGACTCAACA+AGG	+	chr3.3:64141409-64141428	MS.gene35600:intron	30.0%
	GAGTCAATGTACATTATATG+GGG	+	chr3.3:64143490-64143509	MS.gene35600:CDS	30.0%
	GGAGTCAATGTACATTATAT+GGG	+	chr3.3:64143489-64143508	MS.gene35600:CDS	30.0%
	GGGAAGAATTTATTGAGAAA+TGG	-	chr3.3:64141667-64141686	None:intergenic	30.0%
	TAAGGACGAAAATTTAGAGA+CGG	-	chr3.3:64143037-64143056	None:intergenic	30.0%
	TCGAAAAAACACCATAATGT+TGG	+	chr3.3:64141831-64141850	MS.gene35600:CDS	30.0%
	TCGATATTGTCTCTCAAATA+TGG	-	chr3.3:64142641-64142660	None:intergenic	30.0%
	TGGAGTCAATGTACATTATA+TGG	+	chr3.3:64143488-64143507	MS.gene35600:CDS	30.0%
	TTACATGATGCAATTGGAAA+AGG	+	chr3.3:64142252-64142271	MS.gene35600:intron	30.0%
	TTTATGGGGAAAATTTCACT+TGG	-	chr3.3:64143283-64143302	None:intergenic	30.0%
!	CAGTTGTTCTGATTTTTATG+GGG	-	chr3.3:64143297-64143316	None:intergenic	30.0%
!	CCAGTTGTTCTGATTTTTAT+GGG	-	chr3.3:64143298-64143317	None:intergenic	30.0%
!	CTTTCTTGTTCTATGCATTT+TGG	+	chr3.3:64143407-64143426	MS.gene35600:intron	30.0%
!	TCCAGTTGTTCTGATTTTTA+TGG	-	chr3.3:64143299-64143318	None:intergenic	30.0%
!!	CTCATTTTTGGATATGACAT+TGG	+	chr3.3:64141144-64141163	MS.gene35600:CDS	30.0%
!!!	ATCATTAGAGTAATGGGTTT+TGG	+	chr3.3:64141487-64141506	MS.gene35600:intron	30.0%
!!!	CGTTTTTTCAACAGTTTACA+GGG	+	chr3.3:64142689-64142708	MS.gene35600:CDS	30.0%
	AAAAACACCATAATGTTGGG+TGG	+	chr3.3:64141835-64141854	MS.gene35600:CDS	35.0%
	AATTTCACTTGGAATTAGCC+AGG	-	chr3.3:64143272-64143291	None:intergenic	35.0%
	ACATTATATGGGGCAAACAT+TGG	+	chr3.3:64143500-64143519	MS.gene35600:CDS	35.0%
	ACTATTAGTACCAATACCAC+AGG	-	chr3.3:64143087-64143106	None:intergenic	35.0%
	ATATCGACCTCACTTAATCA+TGG	+	chr3.3:64142654-64142673	MS.gene35600:CDS	35.0%
	CAGCCTTTCTTAGAATATCT+GGG	-	chr3.3:64141687-64141706	None:intergenic	35.0%
	CCCATAAAAATCAGAACAAC+TGG	+	chr3.3:64143295-64143314	MS.gene35600:intron	35.0%
	CGAAGATTCTTGTTCATTAC+GGG	+	chr3.3:64142856-64142875	MS.gene35600:CDS	35.0%
	TGTTAAAGGAGAAGTTGAGA+AGG	+	chr3.3:64143537-64143556	MS.gene35600:CDS	35.0%
	TTACTTTCTGCCGTTATTCT+TGG	+	chr3.3:64142778-64142797	MS.gene35600:CDS	35.0%
!	CTTCCCAGATATTCTAAGAA+AGG	+	chr3.3:64141681-64141700	MS.gene35600:CDS	35.0%
!	GCAATTTCAGAAAGGTATAG+TGG	-	chr3.3:64142283-64142302	None:intergenic	35.0%
!	TTCTTTTTACCTGAGACCAA+AGG	+	chr3.3:64143457-64143476	MS.gene35600:CDS	35.0%
!!	AAAGCATTGCAGAAAATCAG+AGG	+	chr3.3:64142529-64142548	MS.gene35600:CDS	35.0%
!!	GTCGTATTCTTCTTGGTTTT+GGG	+	chr3.3:64141923-64141942	MS.gene35600:CDS	35.0%
!!	TCTCAACTGCTTTTGTTGAT+CGG	+	chr3.3:64142827-64142846	MS.gene35600:CDS	35.0%
!!!	CCGTTTTTTCAACAGTTTAC+AGG	+	chr3.3:64142688-64142707	MS.gene35600:CDS	35.0%
!!!	TCGTATTCTTCTTGGTTTTG+GGG	+	chr3.3:64141924-64141943	MS.gene35600:CDS	35.0%
	AAAGCAATTCCTTTGGTCTC+AGG	-	chr3.3:64143469-64143488	None:intergenic	40.0%
	AACCAAGAAGAATACGACCA+AGG	-	chr3.3:64141921-64141940	None:intergenic	40.0%
	ACCAAACCTCTTTCAATCTG+TGG	+	chr3.3:64142735-64142754	MS.gene35600:CDS	40.0%
	ACTGGACAAAGTATAGCAGT+TGG	+	chr3.3:64143313-64143332	MS.gene35600:intron	40.0%
	AGATTCTTGTTCATTACGGG+TGG	+	chr3.3:64142859-64142878	MS.gene35600:CDS	40.0%
	AGTCGTTATACCTGTGGTAT+TGG	+	chr3.3:64143074-64143093	MS.gene35600:intron	40.0%
	ATCCTTGGTCGTATTCTTCT+TGG	+	chr3.3:64141916-64141935	MS.gene35600:CDS	40.0%
	ATTCTTCTTAGGAGTTGTCG+TGG	+	chr3.3:64142342-64142361	MS.gene35600:CDS	40.0%
	CAACAAAAGCAGTTGAGACT+AGG	-	chr3.3:64142825-64142844	None:intergenic	40.0%
	CCAAACCTCTTTCAATCTGT+GGG	+	chr3.3:64142736-64142755	MS.gene35600:CDS	40.0%
	CGACAACTCCTAAGAAGAAT+TGG	-	chr3.3:64142342-64142361	None:intergenic	40.0%
	CGATTCAACTAGTGATCTAC+TGG	-	chr3.3:64141334-64141353	None:intergenic	40.0%
	CTAAACCCACAGATTGAAAG+AGG	-	chr3.3:64142744-64142763	None:intergenic	40.0%
	CTCTTTCAATCTGTGGGTTT+AGG	+	chr3.3:64142742-64142761	MS.gene35600:CDS	40.0%
	CTGAAATTGCTCCACCAAAA+TGG	+	chr3.3:64142293-64142312	MS.gene35600:CDS	40.0%
	GACTGGTATTCATGGTACAA+AGG	+	chr3.3:64143162-64143181	MS.gene35600:CDS	40.0%
	GCAAATGCCATGATTAAGTG+AGG	-	chr3.3:64142664-64142683	None:intergenic	40.0%
	GCAGCCTTTCTTAGAATATC+TGG	-	chr3.3:64141688-64141707	None:intergenic	40.0%
	GGATATGACATTGGGATTTC+AGG	+	chr3.3:64141153-64141172	MS.gene35600:CDS	40.0%
	GGTACAAAGGACATGTCAAA+GGG	+	chr3.3:64143175-64143194	MS.gene35600:CDS	40.0%
	GTTGACGAGTCCAAGAATAA+CGG	-	chr3.3:64142791-64142810	None:intergenic	40.0%
	TCTGTGGGTTTAGGAAACAA+CGG	+	chr3.3:64142751-64142770	MS.gene35600:CDS	40.0%
	TGACTCCAAAGCAATTCCTT+TGG	-	chr3.3:64143476-64143495	None:intergenic	40.0%
	TGAGACCAAAGGAATTGCTT+TGG	+	chr3.3:64143468-64143487	MS.gene35600:CDS	40.0%
	TGGTACAAAGGACATGTCAA+AGG	+	chr3.3:64143174-64143193	MS.gene35600:CDS	40.0%
	TGTATTGTTGCTGCATCTAG+TGG	+	chr3.3:64141120-64141139	MS.gene35600:CDS	40.0%
	TTGAGACTAGGATAGAAGCA+AGG	-	chr3.3:64142813-64142832	None:intergenic	40.0%
	TTGGTGGAGCAATTTCAGAA+AGG	-	chr3.3:64142291-64142310	None:intergenic	40.0%
!	AAGGGTGAGCTTTATGACTT+TGG	-	chr3.3:64141594-64141613	None:intergenic	40.0%
!	ATGCTATGCCACTTCAAGTT+TGG	+	chr3.3:64143382-64143401	MS.gene35600:intron	40.0%
!	GATATTCTAAGAAAGGCTGC+TGG	+	chr3.3:64141688-64141707	MS.gene35600:CDS	40.0%
!	GATTTTCTGCAATGCTTTCC+TGG	-	chr3.3:64142527-64142546	None:intergenic	40.0%
!	GGTCGTATTCTTCTTGGTTT+TGG	+	chr3.3:64141922-64141941	MS.gene35600:CDS	40.0%
!	TTACTATGTTTCTATGCCGC+AGG	+	chr3.3:64143220-64143239	MS.gene35600:CDS	40.0%
!!	ACTGCTTTTGTTGATCGGTT+TGG	+	chr3.3:64142832-64142851	MS.gene35600:CDS	40.0%
!!	AGAAAGCACCAAACTTGAAG+TGG	-	chr3.3:64143393-64143412	None:intergenic	40.0%
!!	GGTTGCTTAATTTGCTTACC+AGG	-	chr3.3:64142903-64142922	None:intergenic	40.0%
!!	TTCAGGAGGTGTTACAACAA+TGG	+	chr3.3:64141639-64141658	MS.gene35600:intron	40.0%
!!!	ATTCTTCTTGGTTTTGGGGT+CGG	+	chr3.3:64141928-64141947	MS.gene35600:CDS	40.0%
!!!	GCATCTAGTGGACTCATTTT+TGG	+	chr3.3:64141132-64141151	MS.gene35600:CDS	40.0%
!!!	TATGGGGCAAACATTGGTTT+TGG	+	chr3.3:64143506-64143525	MS.gene35600:CDS	40.0%
!!!	TTTTGGCGGAGGTTTGTTAA+AGG	+	chr3.3:64143523-64143542	MS.gene35600:CDS	40.0%
	ACGGGCTTCCAATTCTTCTT+AGG	+	chr3.3:64142331-64142350	MS.gene35600:CDS	45.0%
	AGCAAAGTCACTGCAGCTAT+CGG	+	chr3.3:64141808-64141827	MS.gene35600:CDS	45.0%
	CATTCTAATGCTTGTCTGCC+TGG	+	chr3.3:64142882-64142901	MS.gene35600:CDS	45.0%
	CCACAGGTATAACGACTAGA+CGG	-	chr3.3:64143071-64143090	None:intergenic	45.0%
	CCCACAGATTGAAAGAGGTT+TGG	-	chr3.3:64142739-64142758	None:intergenic	45.0%
	GATCTACTGGTCAGTGACTT+TGG	-	chr3.3:64141321-64141340	None:intergenic	45.0%
	GATTCTTGTTCTTGGTCGCA+GGG	+	chr3.3:64142114-64142133	MS.gene35600:intron	45.0%
	GCTTTGACGACTGGTATTCA+TGG	+	chr3.3:64143154-64143173	MS.gene35600:CDS	45.0%
	TTGGAATTAGCCAGGTGAGT+GGG	-	chr3.3:64143264-64143283	None:intergenic	45.0%
!!	CTTGCTGGTGCTGCTATTAA+TGG	+	chr3.3:64141868-64141887	MS.gene35600:CDS	45.0%
!!	GAAGGCACCAATTGTCATCA+CGG	-	chr3.3:64142452-64142471	None:intergenic	45.0%
!!	GCTGACGCTTTGAAAGATTG+CGG	+	chr3.3:64143117-64143136	MS.gene35600:intron	45.0%
!!	TGTTTCTATGCCGCAGGTTT+TGG	+	chr3.3:64143226-64143245	MS.gene35600:intron	45.0%
	AGCAGCACCAGCAAGAAAGA+TGG	-	chr3.3:64141863-64141882	None:intergenic	50.0%
	ATCCTCCATCGATGTTGAGC+CGG	+	chr3.3:64142552-64142571	MS.gene35600:CDS	50.0%
	ATTGCTCCACCAAAATGGCG+AGG	+	chr3.3:64142298-64142317	MS.gene35600:CDS	50.0%
	CCAAGACCAACCAAAACCTG+CGG	-	chr3.3:64143239-64143258	None:intergenic	50.0%
	CCGTCTAGTCGTTATACCTG+TGG	+	chr3.3:64143068-64143087	MS.gene35600:intron	50.0%
	CGATTCTTGTTCTTGGTCGC+AGG	+	chr3.3:64142113-64142132	MS.gene35600:intron	50.0%
	CTTGGAATTAGCCAGGTGAG+TGG	-	chr3.3:64143265-64143284	None:intergenic	50.0%
	GATGGCACCACCCAACATTA+TGG	-	chr3.3:64141845-64141864	None:intergenic	50.0%
	GCCATTGATGCACCTTCGAA+TGG	+	chr3.3:64141060-64141079	MS.gene35600:CDS	50.0%
	GCGACCAAGAACAAGAATCG+CGG	-	chr3.3:64142113-64142132	None:intergenic	50.0%
	GGGCAACGCAACATTGGTAT+TGG	+	chr3.3:64143195-64143214	MS.gene35600:CDS	50.0%
	GTCAAAGGGCAACGCAACAT+TGG	+	chr3.3:64143189-64143208	MS.gene35600:CDS	50.0%
	GTTGCCGCGATTCTTGTTCT+TGG	+	chr3.3:64142106-64142125	MS.gene35600:intron	50.0%
	TAACTCCGGCTCAACATCGA+TGG	-	chr3.3:64142560-64142579	None:intergenic	50.0%
	TCTGCAATGCTTTCCTGGCT+TGG	-	chr3.3:64142522-64142541	None:intergenic	50.0%
	TTTCCGTCGAAGCCATTCGA+AGG	-	chr3.3:64141075-64141094	None:intergenic	50.0%
!	GCCATTCGAAGGTGCATCAA+TGG	-	chr3.3:64141064-64141083	None:intergenic	50.0%
!!	AAAGCACCTCGCCATTTTGG+TGG	-	chr3.3:64142307-64142326	None:intergenic	50.0%
!!	ACTCTCTCTTGGACTAGCAG+TGG	+	chr3.3:64142417-64142436	MS.gene35600:CDS	50.0%
!!	GCTGGTGCTGCTATTAATGG+AGG	+	chr3.3:64141871-64141890	MS.gene35600:CDS	50.0%
!!	GCTTTGCTAGCTTTGACGAC+TGG	+	chr3.3:64143145-64143164	MS.gene35600:CDS	50.0%
!!	TCTATGCCGCAGGTTTTGGT+TGG	+	chr3.3:64143230-64143249	MS.gene35600:intron	50.0%
!!!	CGCAGGTTTTGGTTGGTCTT+GGG	+	chr3.3:64143237-64143256	MS.gene35600:intron	50.0%
!!!	CTGAAAGCACCTCGCCATTT+TGG	-	chr3.3:64142310-64142329	None:intergenic	50.0%
!!!	GCAAACATTGGTTTTGGCGG+AGG	+	chr3.3:64143512-64143531	MS.gene35600:CDS	50.0%
!!!	GCAGGTTTTGGTTGGTCTTG+GGG	+	chr3.3:64143238-64143257	MS.gene35600:intron	50.0%
!!!	GGGGCAAACATTGGTTTTGG+CGG	+	chr3.3:64143509-64143528	MS.gene35600:CDS	50.0%
	AACCAAGCTGCTGGGTGTGT+CGG	-	chr3.3:64142482-64142501	None:intergenic	55.0%
	CCAATTGTCATCACGGCTGC+AGG	-	chr3.3:64142445-64142464	None:intergenic	55.0%
	CCACGTTCAACCAAGCTGCT+GGG	-	chr3.3:64142490-64142509	None:intergenic	55.0%
	CCTGCAGCCGTGATGACAAT+TGG	+	chr3.3:64142442-64142461	MS.gene35600:CDS	55.0%
	GCACCTTCGAATGGCTTCGA+CGG	+	chr3.3:64141069-64141088	MS.gene35600:CDS	55.0%
	GGGTGTGTCGGATATGAGGA+AGG	-	chr3.3:64142470-64142489	None:intergenic	55.0%
	GTGGCAAGATAGACCAAGCC+AGG	+	chr3.3:64142506-64142525	MS.gene35600:CDS	55.0%
	TGCTGGGTGTGTCGGATATG+AGG	-	chr3.3:64142474-64142493	None:intergenic	55.0%
!	ATGGCGAGGTGCTTTCAGCA+CGG	+	chr3.3:64142312-64142331	MS.gene35600:CDS	55.0%
!!	GGTGGTGCCATCTTTCTTGC+TGG	+	chr3.3:64141853-64141872	MS.gene35600:CDS	55.0%
!!!	CCGCAGGTTTTGGTTGGTCT+TGG	+	chr3.3:64143236-64143255	MS.gene35600:intron	55.0%
	ATCCGACACACCCAGCAGCT+TGG	+	chr3.3:64142477-64142496	MS.gene35600:CDS	60.0%
	CCCAGCAGCTTGGTTGAACG+TGG	+	chr3.3:64142487-64142506	MS.gene35600:CDS	60.0%
	CTCCGGCTCAACATCGATGG+AGG	-	chr3.3:64142557-64142576	None:intergenic	60.0%
	GCCACGTTCAACCAAGCTGC+TGG	-	chr3.3:64142491-64142510	None:intergenic	60.0%
	GGAGTTGTCGTGGTTGCTGC+AGG	+	chr3.3:64142352-64142371	MS.gene35600:CDS	60.0%
!	TGGCGAGGTGCTTTCAGCAC+GGG	+	chr3.3:64142313-64142332	MS.gene35600:CDS	60.0%
	ACGCGACCGCCAAGCACACA+TGG	+	chr3.3:64142386-64142405	MS.gene35600:CDS	65.0%
	CCAGCCCCATGTGTGCTTGG+CGG	-	chr3.3:64142395-64142414	None:intergenic	65.0%
	CGCGACCGCCAAGCACACAT+GGG	+	chr3.3:64142387-64142406	MS.gene35600:CDS	65.0%
	GCGACCGCCAAGCACACATG+GGG	+	chr3.3:64142388-64142407	MS.gene35600:CDS	65.0%
	TCGCCAGCCCCATGTGTGCT+TGG	-	chr3.3:64142398-64142417	None:intergenic	65.0%
!	TGGGGCTGGCGACTCTCTCT+TGG	+	chr3.3:64142406-64142425	MS.gene35600:CDS	65.0%
	CCGCCAAGCACACATGGGGC+TGG	+	chr3.3:64142392-64142411	MS.gene35600:CDS	70.0%
	GGTCTTGGGGCCCACTCACC+TGG	+	chr3.3:64143251-64143270	MS.gene35600:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	64141042	64143573	64141042	ID=MS.gene35600
chr3.3	mRNA	64141042	64143573	64141042	ID=MS.gene35600.t1;Parent=MS.gene35600
chr3.3	exon	64141042	64141174	64141042	ID=MS.gene35600.t1.exon1;Parent=MS.gene35600.t1
chr3.3	CDS	64141042	64141174	64141042	ID=cds.MS.gene35600.t1;Parent=MS.gene35600.t1
chr3.3	exon	64141644	64141963	64141644	ID=MS.gene35600.t1.exon2;Parent=MS.gene35600.t1
chr3.3	CDS	64141644	64141963	64141644	ID=cds.MS.gene35600.t1;Parent=MS.gene35600.t1
chr3.3	exon	64142274	64142903	64142274	ID=MS.gene35600.t1.exon3;Parent=MS.gene35600.t1
chr3.3	CDS	64142274	64142903	64142274	ID=cds.MS.gene35600.t1;Parent=MS.gene35600.t1
chr3.3	exon	64143133	64143241	64143133	ID=MS.gene35600.t1.exon4;Parent=MS.gene35600.t1
chr3.3	CDS	64143133	64143241	64143133	ID=cds.MS.gene35600.t1;Parent=MS.gene35600.t1
chr3.3	exon	64143437	64143573	64143437	ID=MS.gene35600.t1.exon5;Parent=MS.gene35600.t1
chr3.3	CDS	64143437	64143573	64143437	ID=cds.MS.gene35600.t1;Parent=MS.gene35600.t1

Gene Sequence

>MS.gene35600

ATGGCAGGTGGGGGGTTTGCCATTGATGCACCTTCGAATGGCTTCGACGGAAAGATAACACTCTCAGTTATCATTACTTGTATTGTTGCTGCATCTAGTGGACTCATTTTTGGATATGACATTGGGATTTCAGGTTTTCTTCCTTTTTGTTTTTTCATTATAAAGTATCCAATTAGAGCATGTTTTTTGCTTTTTAAAGCATCTTGTATTCTGCTACATCAATCTTTGCCCAAAATGAGAGAAAATGTTTTAAACAATGTTTCAAATATCGATTTGCCAAAGTCACTGACCAGTAGATCACTAGTTGAATCGCATGATTTGTACTACTAATAGTTTTCAATTTGAATGATTTGATCATATAACTAAAGAATTAAATTGGACTCAACAAGGTGTCTGTTTCTGTAGAAAATTCTAAAAAAAAAACTTATACCTATAAAATGTCAAAATCATTAGAGTAATGGGTTTTGGACAAAGTCTAATAATTGCATTTTAATCATGATGCTATACATTATTTTTACATTTTATCTTCAAAATTTACTTGGAGAAGAACCAAAGTCATAAAGCTCACCCTTTTTACTAATGAAAAATGTTATCAAATTCAGGAGGTGTTACAACAATGGTGCCATTTCTCAATAAATTCTTCCCAGATATTCTAAGAAAGGCTGCTGGTACTGAAGTAAACATGTACTGTGTGTATGACAGTCAAATGTTGACATTGTTTACGTCTTCTCTGTATCTAGCTGCGTTAGTGTCAACTCTTGTAGCTAGCAAAGTCACTGCAGCTATCGGTCGAAAAAACACCATAATGTTGGGTGGTGCCATCTTTCTTGCTGGTGCTGCTATTAATGGAGGTTCTGAAAATATTGTTATGCTCATCCTTGGTCGTATTCTTCTTGGTTTTGGGGTCGGTTTCACTAGTCAAGTAAGTGAACATATACAATTATACACATTTGTTAATAGTAGTTCAACATCGTCAACAATATAAAATTTTCTATTATACACAAGCAATGAGACCATTTTCCCCTTTTTTAATTTAACTTTTAGCCACAATTTTAAATAGACATGTTGCCGCGATTCTTGTTCTTGGTCGCAGGGACATAAAAATCATAATGTTGTGGTCCAAATTTTGATAGCATCCTTTATTTAAAATATTGCTACTAACTTTTAACTTAATAAACCATGTTTAAAATAAATTTGCTTGCTAATTGTATTACATGATGCAATTGGAAAAGGCGACTCCACTATACCTTTCTGAAATTGCTCCACCAAAATGGCGAGGTGCTTTCAGCACGGGCTTCCAATTCTTCTTAGGAGTTGTCGTGGTTGCTGCAGGTTGCATAAATTACGCGACCGCCAAGCACACATGGGGCTGGCGACTCTCTCTTGGACTAGCAGTGGTGCCTGCAGCCGTGATGACAATTGGTGCCTTCCTCATATCCGACACACCCAGCAGCTTGGTTGAACGTGGCAAGATAGACCAAGCCAGGAAAGCATTGCAGAAAATCAGAGGATCCTCCATCGATGTTGAGCCGGAGTTAAAAGAACTCATTAAGTGGACAGAAGTTTCGAAATCAGTGCAAGAAGAGCCATTTATGACCATATTTGAGAGACAATATCGACCTCACTTAATCATGGCATTTGCAATCCCGTTTTTTCAACAGTTTACAGGGATCAACATCGTCGCTTTCTATTCACCAAACCTCTTTCAATCTGTGGGTTTAGGAAACAACGGTGCTTTACTTTCTGCCGTTATTCTTGGACTCGTCAACCTTGCTTCTATCCTAGTCTCAACTGCTTTTGTTGATCGGTTTGGACGAAGATTCTTGTTCATTACGGGTGGCATTCTAATGCTTGTCTGCCTGGTAAGCAAATTAAGCAACCATATGTGTATAATATTATTTATATTTATTTATTTATTGTTCTAGTATTTTCATATTCAACTATTAAAAAAAATGAAATAACGACAGAAAGATTGCGGTATTAATGCTTTTTCCGTCTCTAAATTTTCGTCCTTATTTTAATTTCTCCGTCTAGTCGTTATACCTGTGGTATTGGTACTAATAGTTATAATTTGTGCTGACGCTTTGAAAGATTGCGGTGTCTGCTTTGCTAGCTTTGACGACTGGTATTCATGGTACAAAGGACATGTCAAAGGGCAACGCAACATTGGTATTGGTTTTACTATGTTTCTATGCCGCAGGTTTTGGTTGGTCTTGGGGCCCACTCACCTGGCTAATTCCAAGTGAAATTTTCCCCATAAAAATCAGAACAACTGGACAAAGTATAGCAGTTGGTGTACAATTCATAATCTTGTTTGTGTTATCACAAACATTCTTGACAATGCTATGCCACTTCAAGTTTGGTGCTTTCTTGTTCTATGCATTTTGGGTTGCAGTGATGACACTATTTATTATTTTCTTTTTACCTGAGACCAAAGGAATTGCTTTGGAGTCAATGTACATTATATGGGGCAAACATTGGTTTTGGCGGAGGTTTGTTAAAGGAGAAGTTGAGAAGGACAATCTTCCATGA

Protein sequence

>MS.gene35600.t1

MAGGGFAIDAPSNGFDGKITLSVIITCIVAASSGLIFGYDIGISGGVTTMVPFLNKFFPDILRKAAGTEVNMYCVYDSQMLTLFTSSLYLAALVSTLVASKVTAAIGRKNTIMLGGAIFLAGAAINGGSENIVMLILGRILLGFGVGFTSQATPLYLSEIAPPKWRGAFSTGFQFFLGVVVVAAGCINYATAKHTWGWRLSLGLAVVPAAVMTIGAFLISDTPSSLVERGKIDQARKALQKIRGSSIDVEPELKELIKWTEVSKSVQEEPFMTIFERQYRPHLIMAFAIPFFQQFTGINIVAFYSPNLFQSVGLGNNGALLSAVILGLVNLASILVSTAFVDRFGRRFLFITGGILMLVCLIAVSALLALTTGIHGTKDMSKGNATLVLVLLCFYAAVMTLFIIFFLPETKGIALESMYIIWGKHWFWRRFVKGEVEKDNLP