AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35602

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35602.t1 MTR_3g074270 91.165 498 24 1 1 498 1 478 0.0 910
MS.gene35602.t1 MTR_3g074410 67.331 502 161 2 1 499 1 502 0.0 713
MS.gene35602.t1 MTR_3g074390 66.667 510 163 3 1 503 1 510 0.0 712
MS.gene35602.t1 MTR_3g008160 50.610 492 236 5 18 505 18 506 2.81e-180 516
MS.gene35602.t1 MTR_5g006070 47.590 498 252 6 14 505 13 507 9.37e-177 507
MS.gene35602.t1 MTR_3g074380 66.120 366 120 3 1 362 1 366 1.99e-176 501
MS.gene35602.t1 MTR_3g008170 49.109 505 249 6 5 504 4 505 2.21e-176 506
MS.gene35602.t1 MTR_0204s0020 49.895 477 235 3 18 493 16 489 6.91e-173 496
MS.gene35602.t1 MTR_5g041550 50.000 510 249 4 1 505 1 509 7.63e-172 494
MS.gene35602.t1 MTR_7g091690 50.803 498 237 5 1 493 1 495 9.33e-171 491
MS.gene35602.t1 MTR_5g094760 49.509 509 245 5 1 502 1 504 1.72e-170 491
MS.gene35602.t1 MTR_1g038630 48.780 492 249 2 16 505 16 506 9.47e-170 489
MS.gene35602.t1 MTR_4g116790 47.211 502 261 3 2 502 6 504 9.68e-170 489
MS.gene35602.t1 MTR_0009s0370 49.290 493 244 4 18 505 16 507 4.69e-169 487
MS.gene35602.t1 MTR_5g082540 47.714 503 258 3 1 500 1 501 6.78e-169 487
MS.gene35602.t1 MTR_0204s0020 49.266 477 235 4 18 493 16 486 7.88e-169 486
MS.gene35602.t1 MTR_1g104750 45.908 501 263 6 1 496 1 498 9.28e-169 486
MS.gene35602.t1 MTR_0204s0040 46.386 498 263 3 3 499 9 503 1.27e-166 481
MS.gene35602.t1 MTR_1g104770 45.418 502 265 6 1 496 1 499 2.05e-165 478
MS.gene35602.t1 MTR_3g093010 49.407 506 250 4 4 504 3 507 2.57e-165 478
MS.gene35602.t1 MTR_1g104780 46.863 510 263 6 1 505 1 507 5.80e-165 477
MS.gene35602.t1 MTR_3g008160 49.783 460 224 5 50 505 1 457 3.09e-164 473
MS.gene35602.t1 MTR_4g116770 46.386 498 263 3 3 499 205 699 7.49e-164 481
MS.gene35602.t1 MTR_3g023480 47.658 491 251 4 18 503 16 505 1.39e-161 468
MS.gene35602.t1 MTR_3g074340 67.290 321 104 1 185 504 18 338 1.02e-160 459
MS.gene35602.t1 MTR_3g074320 66.978 321 105 1 185 504 18 338 4.56e-160 458
MS.gene35602.t1 MTR_5g006070 46.537 462 238 6 50 505 1 459 5.22e-159 460
MS.gene35602.t1 MTR_3g074370 66.667 321 106 1 185 504 18 338 9.56e-159 454
MS.gene35602.t1 MTR_8g102860 47.154 492 254 6 16 504 19 507 1.14e-158 461
MS.gene35602.t1 MTR_4g091370 50.305 491 238 5 14 499 14 503 2.06e-158 460
MS.gene35602.t1 MTR_6g087040 46.047 506 262 7 1 499 1 502 1.46e-156 455
MS.gene35602.t1 MTR_6g088375 46.047 506 262 7 1 499 1 502 1.46e-156 455
MS.gene35602.t1 MTR_1g038600 46.735 490 244 3 16 505 16 488 8.04e-156 453
MS.gene35602.t1 MTR_3g007910 47.485 497 227 6 4 497 3 468 2.34e-154 449
MS.gene35602.t1 MTR_4g090600 48.303 501 248 5 3 499 9 502 1.53e-148 435
MS.gene35602.t1 MTR_3g093060 48.107 449 226 4 50 492 1 448 1.44e-145 426
MS.gene35602.t1 MTR_3g074400 50.889 450 166 6 50 477 1 417 1.05e-144 422
MS.gene35602.t1 MTR_8g102860 46.507 458 239 6 50 504 1 455 3.03e-144 422
MS.gene35602.t1 MTR_4g116790 48.199 361 185 2 2 361 6 365 3.64e-120 358
MS.gene35602.t1 MTR_3g074330 67.089 158 45 1 1 151 1 158 1.16e-68 218
MS.gene35602.t1 MTR_3g074360 67.089 158 45 1 1 151 1 158 1.16e-68 218
MS.gene35602.t1 MTR_3g074310 66.456 158 46 1 1 151 1 158 5.58e-68 216
MS.gene35602.t1 MTR_6g088450 30.303 462 285 10 28 476 63 500 1.53e-56 197
MS.gene35602.t1 MTR_4g072030 30.185 487 291 12 27 490 31 491 2.79e-54 191
MS.gene35602.t1 MTR_8g103500 26.815 496 327 10 6 488 1 473 4.06e-53 187
MS.gene35602.t1 MTR_8g077890 29.065 492 289 11 28 489 24 485 1.31e-50 180
MS.gene35602.t1 MTR_4g069500 28.910 422 269 9 93 490 31 445 4.72e-50 178
MS.gene35602.t1 MTR_4g069500 28.910 422 269 9 93 490 81 495 9.57e-50 178
MS.gene35602.t1 MTR_2g013310 29.238 407 267 7 88 482 26 423 1.16e-48 174
MS.gene35602.t1 MTR_4g077740 28.992 476 300 10 22 482 44 496 1.91e-48 174
MS.gene35602.t1 MTR_2g013310 29.238 407 267 7 88 482 99 496 3.09e-48 174
MS.gene35602.t1 MTR_3g116240 28.455 492 292 14 27 488 32 493 3.52e-48 174
MS.gene35602.t1 MTR_7g082270 28.791 455 296 7 29 482 71 498 1.10e-47 172
MS.gene35602.t1 MTR_5g096000 51.955 179 68 2 4 182 3 163 1.15e-47 167
MS.gene35602.t1 MTR_5g096000 43.939 132 73 1 367 497 168 299 1.02e-27 113
MS.gene35602.t1 MTR_6g018790 28.665 457 294 7 29 482 111 538 3.86e-47 172
MS.gene35602.t1 MTR_7g005910 27.557 479 318 9 29 503 39 492 4.02e-46 168
MS.gene35602.t1 MTR_7g094450 29.602 402 270 4 82 482 80 469 9.25e-46 167
MS.gene35602.t1 MTR_1g116660 26.596 470 316 9 29 492 41 487 9.55e-46 167
MS.gene35602.t1 MTR_7g446340 26.132 486 314 10 12 482 43 498 2.48e-45 166
MS.gene35602.t1 MTR_6g007340 26.132 486 314 10 12 482 43 498 2.48e-45 166
MS.gene35602.t1 MTR_5g075300 26.892 502 318 12 14 489 7 485 3.51e-45 166
MS.gene35602.t1 MTR_3g084110 25.787 508 341 11 7 505 8 488 1.26e-44 164
MS.gene35602.t1 MTR_8g077310 27.612 402 283 3 82 482 87 481 2.90e-42 157
MS.gene35602.t1 MTR_7g082270 29.323 399 255 6 29 427 71 442 3.32e-42 157
MS.gene35602.t1 MTR_8g077310 27.621 391 275 3 93 482 1 384 6.49e-42 154
MS.gene35602.t1 MTR_8g077300 27.970 404 281 4 81 482 78 473 1.95e-40 152
MS.gene35602.t1 MTR_7g094110 28.358 402 275 4 82 482 82 471 3.21e-40 151
MS.gene35602.t1 MTR_1g116650 24.744 489 321 10 12 489 63 515 3.33e-40 152
MS.gene35602.t1 MTR_5g019870 26.465 495 302 14 27 489 18 482 7.75e-39 148
MS.gene35602.t1 MTR_2g020710 25.373 402 286 6 83 482 1 390 3.93e-37 141
MS.gene35602.t1 MTR_5g020270 25.622 402 291 3 82 482 90 484 6.56e-37 142
MS.gene35602.t1 MTR_2g020710 25.248 404 288 6 81 482 88 479 7.87e-37 142
MS.gene35602.t1 MTR_5g020270 25.575 391 283 3 93 482 1 384 1.01e-36 140
MS.gene35602.t1 MTR_2g049020 28.198 344 225 5 34 371 37 364 1.64e-36 142
MS.gene35602.t1 MTR_3g080240 26.247 461 303 10 28 482 98 527 5.69e-36 140
MS.gene35602.t1 MTR_4g013205 25.054 459 309 8 28 482 41 468 6.05e-36 139
MS.gene35602.t1 MTR_7g113960 24.877 406 282 6 82 482 67 454 3.28e-35 137
MS.gene35602.t1 MTR_7g113970 25.061 407 284 6 81 482 101 491 3.60e-35 138
MS.gene35602.t1 MTR_4g118610 25.485 412 277 7 81 482 91 482 4.15e-35 137
MS.gene35602.t1 MTR_2g048720 30.031 323 203 5 34 351 37 341 4.80e-35 138
MS.gene35602.t1 MTR_5g077580 23.464 537 296 11 34 482 37 546 4.90e-35 138
MS.gene35602.t1 MTR_1g022315 25.815 399 273 6 93 482 1 385 1.30e-34 134
MS.gene35602.t1 MTR_1g022315 25.854 410 281 6 82 482 89 484 1.35e-34 136
MS.gene35602.t1 MTR_0064s0040 44.966 149 69 2 4 151 5 141 5.31e-34 125
MS.gene35602.t1 MTR_7g094110 26.617 402 262 4 82 482 82 451 1.60e-33 132
MS.gene35602.t1 MTR_4g064820 28.272 382 241 7 5 370 78 442 5.05e-32 129
MS.gene35602.t1 MTR_6g087910 25.686 401 279 7 87 482 96 482 5.81e-32 128
MS.gene35602.t1 MTR_8g077310 27.972 286 198 3 81 365 86 364 2.46e-30 122
MS.gene35602.t1 MTR_2g026160 27.778 360 231 6 34 383 38 378 7.69e-30 123
MS.gene35602.t1 MTR_5g020270 24.378 402 275 4 82 482 90 463 2.34e-29 120
MS.gene35602.t1 MTR_1g038620 38.608 158 79 2 201 358 50 189 1.06e-28 112
MS.gene35602.t1 MTR_4g069500 27.010 311 198 8 202 490 3 306 9.06e-28 114
MS.gene35602.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.26e-26 112
MS.gene35602.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.31e-26 112
MS.gene35602.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.92e-26 110
MS.gene35602.t1 MTR_4g118610 25.073 343 227 7 81 413 91 413 7.59e-25 107
MS.gene35602.t1 MTR_7g113970 25.540 278 190 4 82 354 102 367 2.41e-24 105
MS.gene35602.t1 MTR_7g113960 25.455 275 188 4 82 351 67 329 4.02e-24 104
MS.gene35602.t1 MTR_1g114280 37.736 159 79 3 343 501 19 157 4.48e-24 99.0
MS.gene35602.t1 MTR_2g026140 26.031 388 246 8 3 380 4 360 6.15e-23 102
MS.gene35602.t1 MTR_5g024740 27.119 354 213 12 21 350 2 334 1.56e-20 95.5
MS.gene35602.t1 MTR_3g116060 33.929 168 105 3 94 257 56 221 1.76e-19 92.4
MS.gene35602.t1 MTR_8g073100 28.017 232 155 4 77 306 41 262 4.03e-19 91.3
MS.gene35602.t1 MTR_5g044910 29.885 174 116 3 83 252 47 218 9.53e-19 90.1
MS.gene35602.t1 MTR_3g118530 31.138 167 111 3 94 257 58 223 8.77e-16 80.9
MS.gene35602.t1 MTR_3g118530 31.138 167 111 3 94 257 58 223 2.94e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35602.t1 AT1G34580 60.558 502 193 3 1 497 1 502 0.0 628
MS.gene35602.t1 AT1G34580 59.649 456 180 2 50 501 1 456 0.0 565
MS.gene35602.t1 AT5G26340 49.203 502 248 5 1 497 1 500 0.0 520
MS.gene35602.t1 AT3G19930 50.100 499 245 3 4 499 3 500 1.92e-177 509
MS.gene35602.t1 AT3G19930 50.100 499 245 3 4 499 3 500 1.92e-177 509
MS.gene35602.t1 AT4G21480 52.361 487 229 3 14 498 14 499 2.97e-176 505
MS.gene35602.t1 AT1G11260 49.806 516 247 5 1 505 1 515 1.80e-175 504
MS.gene35602.t1 AT3G19940 50.518 483 236 3 19 499 21 502 8.19e-175 502
MS.gene35602.t1 AT1G50310 49.380 484 241 4 19 499 21 503 2.82e-172 496
MS.gene35602.t1 AT4G02050 47.896 499 250 5 1 493 1 495 2.93e-170 490
MS.gene35602.t1 AT4G02050 47.896 499 250 5 1 493 1 495 2.93e-170 490
MS.gene35602.t1 AT5G61520 47.619 483 243 6 18 493 19 498 2.47e-165 478
MS.gene35602.t1 AT5G23270 48.400 500 252 4 1 495 1 499 5.36e-165 477
MS.gene35602.t1 AT5G26250 46.573 496 256 5 16 505 15 507 9.99e-160 463
MS.gene35602.t1 AT3G05960 46.748 492 255 5 7 496 7 493 5.96e-158 459
MS.gene35602.t1 AT1G77210 43.898 508 275 8 1 502 1 504 1.10e-150 440
MS.gene35602.t1 AT1G77210 43.898 508 275 8 1 502 1 504 1.10e-150 440
MS.gene35602.t1 AT5G61520 46.681 452 231 6 49 493 2 450 1.52e-150 438
MS.gene35602.t1 AT1G07340 41.916 501 283 5 1 497 1 497 4.25e-139 410
MS.gene35602.t1 AT1G50310 47.009 351 183 3 151 499 11 360 8.30e-116 346
MS.gene35602.t1 AT1G77210 42.373 354 198 6 151 502 6 355 1.07e-99 304
MS.gene35602.t1 AT4G36670 27.723 505 304 12 27 505 21 490 2.61e-52 185
MS.gene35602.t1 AT3G18830 26.220 492 311 11 27 493 40 504 1.71e-50 181
MS.gene35602.t1 AT2G16130 27.066 484 311 10 27 489 30 492 8.32e-49 176
MS.gene35602.t1 AT2G18480 31.002 429 253 10 88 486 68 483 1.20e-48 175
MS.gene35602.t1 AT2G16120 26.860 484 312 10 27 489 30 492 6.11e-48 173
MS.gene35602.t1 AT5G16150 29.387 473 296 8 16 482 98 538 1.19e-47 173
MS.gene35602.t1 AT5G16150 29.387 473 296 8 16 482 98 538 1.19e-47 173
MS.gene35602.t1 AT5G16150 29.387 473 296 8 16 482 98 538 1.19e-47 173
MS.gene35602.t1 AT5G59250 29.757 494 304 9 6 482 85 552 3.47e-45 167
MS.gene35602.t1 AT1G75220 27.764 407 284 4 82 486 88 486 1.03e-43 161
MS.gene35602.t1 AT2G48020 27.833 406 280 5 81 485 67 460 4.17e-43 159
MS.gene35602.t1 AT2G48020 27.833 406 280 5 81 485 67 460 4.17e-43 159
MS.gene35602.t1 AT2G20780 24.793 484 321 10 12 482 43 496 1.14e-42 159
MS.gene35602.t1 AT3G05160 26.860 484 318 7 1 482 1 450 3.15e-42 157
MS.gene35602.t1 AT2G20780 26.161 409 277 8 87 482 42 438 3.75e-42 157
MS.gene35602.t1 AT3G05160 28.250 400 274 4 84 482 14 401 2.65e-41 153
MS.gene35602.t1 AT3G05160 28.250 400 274 4 84 482 14 401 2.65e-41 153
MS.gene35602.t1 AT3G05165 26.226 469 312 6 16 482 23 459 1.21e-40 152
MS.gene35602.t1 AT3G05165 26.226 469 312 6 16 482 23 459 1.21e-40 152
MS.gene35602.t1 AT3G05165 26.226 469 312 6 16 482 23 459 1.21e-40 152
MS.gene35602.t1 AT1G19450 27.792 403 281 4 82 482 89 483 1.46e-40 152
MS.gene35602.t1 AT5G17010 27.178 482 313 9 16 482 40 498 1.51e-40 153
MS.gene35602.t1 AT5G17010 27.178 482 313 9 16 482 40 498 1.51e-40 153
MS.gene35602.t1 AT5G17010 27.178 482 313 9 16 482 40 498 1.51e-40 153
MS.gene35602.t1 AT1G08930 25.847 472 314 8 14 482 49 487 4.33e-40 151
MS.gene35602.t1 AT1G08930 25.847 472 314 8 14 482 49 487 4.33e-40 151
MS.gene35602.t1 AT1G54730 27.586 406 273 5 82 482 72 461 2.90e-39 149
MS.gene35602.t1 AT5G27350 25.726 482 322 7 4 482 12 460 5.78e-39 148
MS.gene35602.t1 AT3G05150 27.845 413 264 8 82 482 75 465 6.07e-39 148
MS.gene35602.t1 AT3G05150 27.845 413 264 8 82 482 75 465 6.37e-39 148
MS.gene35602.t1 AT3G05150 27.845 413 264 8 82 482 75 465 6.37e-39 148
MS.gene35602.t1 AT1G08900 28.288 403 274 5 82 482 23 412 7.66e-39 146
MS.gene35602.t1 AT1G08900 28.288 403 274 5 82 482 65 454 1.13e-38 147
MS.gene35602.t1 AT1G08900 28.288 403 274 5 82 482 65 454 1.13e-38 147
MS.gene35602.t1 AT4G04760 27.913 412 281 6 82 489 12 411 1.22e-38 146
MS.gene35602.t1 AT1G08900 28.288 403 274 5 82 482 57 446 1.25e-38 147
MS.gene35602.t1 AT4G04760 28.117 409 278 6 82 486 71 467 2.79e-38 146
MS.gene35602.t1 AT1G67300 26.190 462 303 8 28 482 56 486 1.26e-37 144
MS.gene35602.t1 AT3G05400 26.733 404 281 5 81 482 65 455 1.71e-37 144
MS.gene35602.t1 AT5G27360 24.426 479 328 7 6 482 18 464 2.13e-37 144
MS.gene35602.t1 AT5G27360 24.426 479 328 7 6 482 66 512 2.18e-37 144
MS.gene35602.t1 AT5G18840 25.610 410 279 5 81 482 83 474 3.38e-37 143
MS.gene35602.t1 AT1G79820 26.304 460 302 8 28 482 59 486 5.50e-37 143
MS.gene35602.t1 AT1G79820 26.304 460 302 8 28 482 59 486 5.50e-37 143
MS.gene35602.t1 AT3G05165 26.168 428 282 6 16 441 23 418 6.11e-37 142
MS.gene35602.t1 AT3G05165 26.168 428 282 6 16 441 23 418 6.11e-37 142
MS.gene35602.t1 AT3G03090 30.097 412 263 7 85 482 98 498 6.56e-37 143
MS.gene35602.t1 AT1G67300 26.923 416 260 8 28 434 56 436 9.64e-37 141
MS.gene35602.t1 AT1G67300 26.923 416 260 8 28 434 56 436 9.64e-37 141
MS.gene35602.t1 AT4G04750 26.733 404 281 5 82 482 76 467 1.12e-36 142
MS.gene35602.t1 AT4G04750 26.733 404 281 5 82 482 76 467 1.12e-36 142
MS.gene35602.t1 AT3G05165 26.714 423 275 7 5 425 13 402 1.34e-36 142
MS.gene35602.t1 AT4G04750 26.667 405 282 5 81 482 119 511 1.50e-36 142
MS.gene35602.t1 AT2G43330 24.224 483 343 8 27 505 35 498 1.58e-36 142
MS.gene35602.t1 AT1G67300 26.496 468 293 10 28 482 56 485 2.19e-36 141
MS.gene35602.t1 AT1G67300 26.496 468 293 10 28 482 56 485 2.19e-36 141
MS.gene35602.t1 AT3G05155 24.622 463 311 9 23 482 27 454 8.38e-36 139
MS.gene35602.t1 AT1G08900 28.871 381 248 8 82 452 65 432 3.24e-35 137
MS.gene35602.t1 AT1G54730 27.671 365 243 5 82 441 72 420 1.02e-34 135
MS.gene35602.t1 AT4G04760 27.873 409 276 6 82 486 71 464 1.05e-34 136
MS.gene35602.t1 AT3G05400 27.419 372 255 5 113 482 77 435 2.24e-34 134
MS.gene35602.t1 AT1G67300 26.406 409 257 8 28 427 56 429 2.47e-34 134
MS.gene35602.t1 AT1G67300 26.406 409 257 8 28 427 56 429 2.47e-34 134
MS.gene35602.t1 AT1G05030 25.217 460 307 10 29 482 85 513 2.82e-34 135
MS.gene35602.t1 AT1G05030 26.119 402 278 7 87 482 73 461 5.26e-34 134
MS.gene35602.t1 AT1G54730 25.485 412 253 5 82 482 72 440 6.25e-34 133
MS.gene35602.t1 AT1G08890 23.868 486 336 9 1 482 1 456 8.83e-34 133
MS.gene35602.t1 AT4G16480 28.421 380 244 6 3 370 4 367 2.48e-33 134
MS.gene35602.t1 AT4G16480 28.421 380 244 6 3 370 4 367 2.48e-33 134
MS.gene35602.t1 AT4G16480 28.421 380 244 6 3 370 4 367 2.48e-33 134
MS.gene35602.t1 AT1G79820 25.735 408 271 6 28 433 59 436 2.74e-33 132
MS.gene35602.t1 AT1G30220 28.916 332 214 6 34 359 39 354 3.10e-33 133
MS.gene35602.t1 AT5G27360 26.404 356 247 5 129 482 18 360 3.97e-32 127
MS.gene35602.t1 AT5G27360 26.404 356 247 5 129 482 18 360 3.97e-32 127
MS.gene35602.t1 AT1G54730 26.301 365 227 8 82 441 72 399 2.37e-29 120
MS.gene35602.t1 AT1G08920 24.510 408 290 6 82 482 72 468 2.60e-29 120
MS.gene35602.t1 AT2G48020 27.719 285 197 3 82 365 68 344 2.89e-29 119
MS.gene35602.t1 AT1G54730 27.300 337 224 5 82 413 72 392 3.37e-29 119
MS.gene35602.t1 AT1G54730 27.300 337 224 5 82 413 72 392 3.37e-29 119
MS.gene35602.t1 AT2G35740 27.378 347 227 5 34 371 37 367 6.38e-29 120
MS.gene35602.t1 AT2G48020 27.798 277 191 3 81 356 67 335 1.02e-28 117
MS.gene35602.t1 AT1G08920 24.816 407 283 7 82 482 72 461 1.27e-28 119
MS.gene35602.t1 AT1G54730 28.000 275 181 4 82 351 72 334 5.80e-27 111
MS.gene35602.t1 AT5G27360 23.706 367 248 6 6 369 18 355 4.00e-26 110
MS.gene35602.t1 AT1G54730 27.309 249 167 3 82 325 72 311 1.74e-25 107
MS.gene35602.t1 AT1G54730 27.309 249 167 3 82 325 72 311 1.74e-25 107
MS.gene35602.t1 AT1G54730 27.309 249 167 3 82 325 72 311 4.52e-25 107
MS.gene35602.t1 AT1G08920 24.571 350 241 7 82 425 72 404 5.69e-25 107
MS.gene35602.t1 AT3G05155 23.867 331 219 7 23 351 27 326 1.65e-24 104
MS.gene35602.t1 AT3G20460 23.325 403 296 5 81 482 92 482 7.73e-24 104
MS.gene35602.t1 AT1G79820 22.926 458 272 6 28 482 59 438 9.48e-24 104
MS.gene35602.t1 AT5G17010 24.638 483 264 13 16 482 37 435 3.67e-23 102
MS.gene35602.t1 AT3G51490 29.644 253 157 7 22 271 3 237 1.40e-21 99.0
MS.gene35602.t1 AT3G51490 29.644 253 157 7 22 271 3 237 1.55e-21 99.0
MS.gene35602.t1 AT3G51490 31.016 187 126 3 87 271 2 187 2.98e-20 94.7
MS.gene35602.t1 AT1G79820 23.823 361 211 5 125 482 77 376 4.38e-19 89.7
MS.gene35602.t1 AT1G20840 31.628 215 132 5 75 277 30 241 8.16e-19 90.5
MS.gene35602.t1 AT1G20840 31.628 215 132 5 75 277 30 241 8.16e-19 90.5
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.48e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.48e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.48e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.57e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.57e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.57e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.57e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.57e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.57e-18 89.0
MS.gene35602.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.57e-18 89.0

Find 99 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATATGACCTTGGAATTTC+AGG 0.170370 3.3:+64128300 MS.gene35602:CDS
CTTGTGGGTGGTGCCATTAC+TGG 0.172040 3.3:+64128736 MS.gene35602:CDS
AATATTGCTATGCTCATTAT+TGG 0.232942 3.3:+64128769 MS.gene35602:CDS
CTTAATGCTCCTCGCCATTT+TGG 0.247223 3.3:-64129185 None:intergenic
AAATGAAGTCCTTTGGTTTC+AGG 0.252457 3.3:-64130262 None:intergenic
CTTTCTTGTTCCATGGTACT+TGG 0.252907 3.3:+64130203 MS.gene35602:CDS
CGGAAATTGCTCCACCAAAA+TGG 0.280129 3.3:+64129171 MS.gene35602:CDS
TGGTGTGTCGTATATAATTA+AGG 0.283943 3.3:-64129345 None:intergenic
GCAGCCTTCTCAAGGACTTC+AGG 0.312481 3.3:-64128553 None:intergenic
TATTGGCGCTACTACGTTAA+AGG 0.334241 3.3:+64130319 MS.gene35602:CDS
TTACTTCTCGGCTTTGGAAT+TGG 0.340499 3.3:+64128796 MS.gene35602:CDS
AGTGTCTACTCTGCAGGTTT+TGG 0.343218 3.3:+64130022 MS.gene35602:CDS
CAAACCCAATCGATACAAAA+AGG 0.344412 3.3:-64129616 None:intergenic
TGAAACCAAAGGACTTCATT+TGG 0.348457 3.3:+64130264 MS.gene35602:CDS
CGTAGAAACACCATCATGTT+GGG 0.353809 3.3:+64128700 MS.gene35602:CDS
GGTCGATTACTTCTCGGCTT+TGG 0.353860 3.3:+64128790 MS.gene35602:CDS
GGCTACTCCATTGTACCTTT+CGG 0.362825 3.3:+64129151 MS.gene35602:intron
CTTCTCAACCATTGTTGATC+GGG 0.374414 3.3:+64129703 MS.gene35602:CDS
CCTTTGAAAATCAGAACAAC+TGG 0.375616 3.3:+64130091 MS.gene35602:CDS
ATTATTGGTCGATTACTTCT+CGG 0.379515 3.3:+64128784 MS.gene35602:CDS
ACAACTCACGGGGATCAATA+TGG 0.380415 3.3:+64129574 MS.gene35602:CDS
CCACGCTCCACCAAACTGTT+TGG 0.383713 3.3:-64129365 None:intergenic
TTGCTCTCAACATCCACTTC+TGG 0.383843 3.3:-64128219 None:intergenic
TGTCTGAGACAACACAAATA+TGG 0.384159 3.3:-64130146 None:intergenic
TGTTGCCGCAAAACACCCTT+GGG 0.384293 3.3:+64129265 MS.gene35602:CDS
TGGGGATGGCGAATCTCTCT+TGG 0.392847 3.3:+64129284 MS.gene35602:CDS
TGAATCCAAATGAAGTCCTT+TGG 0.395713 3.3:-64130269 None:intergenic
TGGATTCAATCTATGACATA+TGG 0.404244 3.3:+64130284 MS.gene35602:CDS
TCGATATTGTCTCTCCAATA+TGG 0.407944 3.3:-64129513 None:intergenic
TGTGTTGTCTCAGACATTCA+TGG 0.408561 3.3:+64130153 MS.gene35602:CDS
TTGCTTGGCAACATTATACT+TGG 0.420380 3.3:+64129653 MS.gene35602:CDS
ACGTCCTCACTGTATCTAGC+TGG 0.421443 3.3:+64128631 MS.gene35602:CDS
TATGGTGCTTTCTTGTTCCA+TGG 0.437263 3.3:+64130196 MS.gene35602:CDS
ATGTTATGTCACTTGAAGTA+TGG 0.438209 3.3:+64130178 MS.gene35602:CDS
ATACGACACACCAAACAGTT+TGG 0.446900 3.3:+64129355 MS.gene35602:CDS
CTTGGAATTATCCACAATAG+AGG 0.466419 3.3:-64130058 None:intergenic
GGTAGCATATCGAAGGGAAA+TGG 0.466766 3.3:+64129977 MS.gene35602:CDS
GCGACTGGTGTTCACGGAAC+AGG 0.469212 3.3:+64129956 MS.gene35602:CDS
CGAAGAGTCTTGTTCATCAT+AGG 0.469654 3.3:+64129731 MS.gene35602:CDS
TCTTCTCAACCATTGTTGAT+CGG 0.472011 3.3:+64129702 MS.gene35602:CDS
TCAACCATTGTTGATCGGGT+TGG 0.475506 3.3:+64129707 MS.gene35602:CDS
TTGTTGCCGCAAAACACCCT+TGG 0.476530 3.3:+64129264 MS.gene35602:CDS
TTGATGAGTGTCTACTCTGC+AGG 0.483118 3.3:+64130016 MS.gene35602:CDS
TCTAACAAGTTCTTCTAACT+CGG 0.490740 3.3:-64129447 None:intergenic
TATGGTGTAAACACTGGTAT+TGG 0.490926 3.3:+64130302 MS.gene35602:CDS
GGTCATGGGGTCCTCTATTG+TGG 0.495738 3.3:+64130047 MS.gene35602:CDS
TGCATTGTTGCAGCATCTAG+TGG 0.496424 3.3:+64128267 MS.gene35602:CDS
CCGATAGTGATCAATGCTGC+TGG 0.500955 3.3:-64129320 None:intergenic
GGTCACCAAGCAGCTTTGCT+TGG 0.501441 3.3:+64129638 MS.gene35602:CDS
GCAAGAAGAGTATAATAAAG+AGG 0.511393 3.3:-64130240 None:intergenic
GCAATGGCGACTGGTGTTCA+CGG 0.513386 3.3:+64129950 MS.gene35602:CDS
CAAAGCAGACACACCAGAAG+TGG 0.514148 3.3:+64128206 MS.gene35602:CDS
GGTATCATCTTTCTTGTGGG+TGG 0.517222 3.3:+64128724 MS.gene35602:CDS
CTTTCCTGAAGTCCTTGAGA+AGG 0.524113 3.3:+64128549 MS.gene35602:CDS
CATAGAAGGTTCAACATGGC+TGG 0.524744 3.3:+64128174 None:intergenic
CTAACAAGTTCTTCTAACTC+GGG 0.526141 3.3:-64129446 None:intergenic
ATTGTGATGGCAATGGCGAC+TGG 0.537992 3.3:+64129941 MS.gene35602:CDS
CCGCAAAACACCCTTGGGGA+TGG 0.542471 3.3:+64129270 MS.gene35602:CDS
CGACACACCAAACAGTTTGG+TGG 0.546423 3.3:+64129358 MS.gene35602:CDS
CCAGCAGCATTGATCACTAT+CGG 0.547786 3.3:+64129320 MS.gene35602:CDS
GAGACAATATCGACCTCACT+TGG 0.559094 3.3:+64129523 MS.gene35602:CDS
CCAAACAGTTTGGTGGAGCG+TGG 0.560048 3.3:+64129365 MS.gene35602:CDS
CCTTGAGAAGGCTGCAAAAG+CGG 0.563843 3.3:+64128561 MS.gene35602:CDS
AGGTTCAACATGGCTGGTGG+AGG 0.564731 3.3:+64128180 None:intergenic
CAAGAAGAGTATAATAAAGA+GGG 0.565630 3.3:-64130239 None:intergenic
GATCAATGCTGCTGGAACCA+CGG 0.567606 3.3:-64129312 None:intergenic
CGTCCTCACTGTATCTAGCT+GGG 0.570494 3.3:+64128632 MS.gene35602:CDS
CGGAACAGGTAGCATATCGA+AGG 0.581483 3.3:+64129970 MS.gene35602:CDS
ACGTAGAAACACCATCATGT+TGG 0.585374 3.3:+64128699 MS.gene35602:CDS
AGAGAGATTCGCCATCCCCA+AGG 0.594124 3.3:-64129281 None:intergenic
AGAAGGTTCAACATGGCTGG+TGG 0.594456 3.3:+64128177 None:intergenic
TAGTCGAATCACATCCACAC+TGG 0.602221 3.3:+64128675 MS.gene35602:CDS
AAAGCTTTGCATAAAATCAG+AGG 0.605462 3.3:+64129407 MS.gene35602:CDS
GCAATTTCCGAAAGGTACAA+TGG 0.605466 3.3:-64129158 None:intergenic
AGTCGAATCACATCCACACT+GGG 0.608510 3.3:+64128676 MS.gene35602:CDS
GGCGAGGAGCATTAAGCACA+TGG 0.611189 3.3:+64129192 MS.gene35602:CDS
AATCTCTCTTGGCTTAGCCG+TGG 0.614280 3.3:+64129295 MS.gene35602:CDS
CTCTTCTTGCCTGAAACCAA+AGG 0.616625 3.3:+64130253 MS.gene35602:CDS
GAGAGATTCGCCATCCCCAA+GGG 0.619261 3.3:-64129280 None:intergenic
TGTTGCCAAGCAAAGCTGCT+TGG 0.620105 3.3:-64129643 None:intergenic
ATGACATATGGTGTAAACAC+TGG 0.624663 3.3:+64130296 MS.gene35602:CDS
AGAGTCTTGTTCATCATAGG+TGG 0.627266 3.3:+64129734 MS.gene35602:CDS
TTGGTGGAGCAATTTCCGAA+AGG 0.634951 3.3:-64129166 None:intergenic
CAAACAGTTTGGTGGAGCGT+GGG 0.635003 3.3:+64129366 MS.gene35602:CDS
GTAGAAACACCATCATGTTG+GGG 0.637596 3.3:+64128701 MS.gene35602:CDS
TCGACCAACCCGATCAACAA+TGG 0.638791 3.3:-64129711 None:intergenic
TGACAATAATCCAAGTACCA+TGG 0.646403 3.3:-64130213 None:intergenic
GCAACTGCTATCACCAAGTG+AGG 0.648762 3.3:-64129536 None:intergenic
GATTGCAGTGGCTATTGTGA+TGG 0.649480 3.3:+64129928 MS.gene35602:intron
GTGGGTGGTGCCATTACTGG+AGG 0.653067 3.3:+64128739 MS.gene35602:CDS
TATTGCTATGAAGATTGCAG+TGG 0.665953 3.3:+64129916 MS.gene35602:intron
ATTGCTCCACCAAAATGGCG+AGG 0.677731 3.3:+64129176 MS.gene35602:CDS
GGAACAGGTAGCATATCGAA+GGG 0.679938 3.3:+64129971 MS.gene35602:CDS
AGTGGCTATTGTGATGGCAA+TGG 0.681229 3.3:+64129934 MS.gene35602:CDS
TAGAAACACCATCATGTTGG+GGG 0.693319 3.3:+64128702 MS.gene35602:CDS
GGTGTTTCTACGTCCCAGTG+TGG 0.701991 3.3:-64128689 None:intergenic
AGAAACACCATCATGTTGGG+GGG 0.714656 3.3:+64128703 MS.gene35602:CDS
GTTGCCGCAAAACACCCTTG+GGG 0.729000 3.3:+64129266 MS.gene35602:CDS
TAACCCAGCTAGATACAGTG+AGG 0.758912 3.3:-64128635 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAATCATAAAATATTACA+CGG - chr3.3:64128845-64128864 None:intergenic 15.0%
!! ATTTCTATCTTTAATTCTCT+CGG + chr3.3:64129799-64129818 MS.gene35602:intron 20.0%
!!! TACATTTTGAAGATTCAAAA+TGG - chr3.3:64128870-64128889 None:intergenic 20.0%
!!! TTTCAATTTTTTATGCAAGT+TGG + chr3.3:64129215-64129234 MS.gene35602:CDS 20.0%
! AATATTGCTATGCTCATTAT+TGG + chr3.3:64128769-64128788 MS.gene35602:CDS 25.0%
! ATACAACCATTATTGAAGTA+TGG + chr3.3:64129116-64129135 MS.gene35602:intron 25.0%
! ATCAATTCAATTGATGAAAC+TGG + chr3.3:64128976-64128995 MS.gene35602:intron 25.0%
! ATTTCCATCAAGAATTGAAT+TGG - chr3.3:64128479-64128498 None:intergenic 25.0%
! GATGGAAATGTTAAAATTTC+AGG + chr3.3:64128490-64128509 MS.gene35602:intron 25.0%
! TACGAATCAACAAATTAGTT+TGG + chr3.3:64128917-64128936 MS.gene35602:intron 25.0%
! TGACAAACAACTAAATTGAT+TGG - chr3.3:64128956-64128975 None:intergenic 25.0%
! TTCAAAGGAAAAATTTCACT+TGG - chr3.3:64130079-64130098 None:intergenic 25.0%
!! ATTTTCGTTGAGATAATTGT+AGG + chr3.3:64128432-64128451 MS.gene35602:intron 25.0%
!! CAAGAAGAGTATAATAAAGA+GGG - chr3.3:64130242-64130261 None:intergenic 25.0%
!! GAGATAATTGTAGGTTTTTA+AGG + chr3.3:64128441-64128460 MS.gene35602:intron 25.0%
!! TATATACTTGATGCTTTAGA+AGG - chr3.3:64128371-64128390 None:intergenic 25.0%
!!! AATGTAGAATTTTGACAAGT+AGG + chr3.3:64128884-64128903 MS.gene35602:intron 25.0%
!!! ATATACTTGATGCTTTAGAA+GGG - chr3.3:64128370-64128389 None:intergenic 25.0%
AAAAAGAACCTGAAATTCCA+AGG - chr3.3:64128311-64128330 None:intergenic 30.0%
AAAGCTTTGCATAAAATCAG+AGG + chr3.3:64129407-64129426 MS.gene35602:CDS 30.0%
ATTATTGGTCGATTACTTCT+CGG + chr3.3:64128784-64128803 MS.gene35602:CDS 30.0%
ATTCAATTGATGAAACTGGA+TGG + chr3.3:64128980-64128999 MS.gene35602:intron 30.0%
CAATCACCATACTTCAATAA+TGG - chr3.3:64129125-64129144 None:intergenic 30.0%
CTAACCAATTCAATTCTTGA+TGG + chr3.3:64128472-64128491 MS.gene35602:intron 30.0%
GGAAATGTTAAAATTTCAGG+AGG + chr3.3:64128493-64128512 MS.gene35602:intron 30.0%
TCTAACAAGTTCTTCTAACT+CGG - chr3.3:64129450-64129469 None:intergenic 30.0%
TGGATTCAATCTATGACATA+TGG + chr3.3:64130284-64130303 MS.gene35602:CDS 30.0%
TGGTGTGTCGTATATAATTA+AGG - chr3.3:64129348-64129367 None:intergenic 30.0%
! ATGTTATGTCACTTGAAGTA+TGG + chr3.3:64130178-64130197 MS.gene35602:CDS 30.0%
! GAAGTATGGTGATTGATTTA+AGG + chr3.3:64129130-64129149 MS.gene35602:intron 30.0%
! GATTTTATGCAAAGCTTTTC+TGG - chr3.3:64129405-64129424 None:intergenic 30.0%
! GCAAGAAGAGTATAATAAAG+AGG - chr3.3:64130243-64130262 None:intergenic 30.0%
!! TATACTTGATGCTTTAGAAG+GGG - chr3.3:64128369-64128388 None:intergenic 30.0%
!!! CTAACCTTTTTGTATCGATT+GGG + chr3.3:64129612-64129631 MS.gene35602:CDS 30.0%
ATGACATATGGTGTAAACAC+TGG + chr3.3:64130296-64130315 MS.gene35602:CDS 35.0%
CAAACCCAATCGATACAAAA+AGG - chr3.3:64129619-64129638 None:intergenic 35.0%
CCAATCGATACAAAAAGGTT+AGG - chr3.3:64129614-64129633 None:intergenic 35.0%
CTAACAAGTTCTTCTAACTC+GGG - chr3.3:64129449-64129468 None:intergenic 35.0%
CTCTCCAATATGGTCAAAAA+AGG - chr3.3:64129506-64129525 None:intergenic 35.0%
CTTGGAATTATCCACAATAG+AGG - chr3.3:64130061-64130080 None:intergenic 35.0%
TATGGTGTAAACACTGGTAT+TGG + chr3.3:64130302-64130321 MS.gene35602:CDS 35.0%
TATTGCTATGAAGATTGCAG+TGG + chr3.3:64129916-64129935 MS.gene35602:intron 35.0%
TCGATATTGTCTCTCCAATA+TGG - chr3.3:64129516-64129535 None:intergenic 35.0%
TCTTCTCAACCATTGTTGAT+CGG + chr3.3:64129702-64129721 MS.gene35602:CDS 35.0%
TGAAACCAAAGGACTTCATT+TGG + chr3.3:64130264-64130283 MS.gene35602:CDS 35.0%
TGAATCCAAATGAAGTCCTT+TGG - chr3.3:64130272-64130291 None:intergenic 35.0%
TGACAATAATCCAAGTACCA+TGG - chr3.3:64130216-64130235 None:intergenic 35.0%
TTGCTTGGCAACATTATACT+TGG + chr3.3:64129653-64129672 MS.gene35602:CDS 35.0%
! AAATGAAGTCCTTTGGTTTC+AGG - chr3.3:64130265-64130284 None:intergenic 35.0%
! CCAGTTGTTCTGATTTTCAA+AGG - chr3.3:64130094-64130113 None:intergenic 35.0%
! CCTTTGAAAATCAGAACAAC+TGG + chr3.3:64130091-64130110 MS.gene35602:CDS 35.0%
! CTTCAGGAAAGAATTTTTCG+AGG - chr3.3:64128540-64128559 None:intergenic 35.0%
! TGTCTGAGACAACACAAATA+TGG - chr3.3:64130149-64130168 None:intergenic 35.0%
!! CCTAACCTTTTTGTATCGAT+TGG + chr3.3:64129611-64129630 MS.gene35602:CDS 35.0%
!! CTCATTTTTGGATATGACCT+TGG + chr3.3:64128291-64128310 MS.gene35602:CDS 35.0%
!! TTTTATGCAAGTTGGCGTTT+TGG + chr3.3:64129223-64129242 MS.gene35602:CDS 35.0%
!!! AGAGCCTTTTTTGACCATAT+TGG + chr3.3:64129499-64129518 MS.gene35602:CDS 35.0%
!!! CTTTTTGTATCGATTGGGTT+TGG + chr3.3:64129617-64129636 MS.gene35602:CDS 35.0%
!!! GGAAAGAATTTTTCGAGGAA+TGG - chr3.3:64128535-64128554 None:intergenic 35.0%
ACGTAGAAACACCATCATGT+TGG + chr3.3:64128699-64128718 MS.gene35602:CDS 40.0%
ATACGACACACCAAACAGTT+TGG + chr3.3:64129355-64129374 MS.gene35602:CDS 40.0%
CGTAGAAACACCATCATGTT+GGG + chr3.3:64128700-64128719 MS.gene35602:CDS 40.0%
CTTCTCAACCATTGTTGATC+GGG + chr3.3:64129703-64129722 MS.gene35602:CDS 40.0%
CTTTCTTGTTCCATGGTACT+TGG + chr3.3:64130203-64130222 MS.gene35602:CDS 40.0%
GGATATGACCTTGGAATTTC+AGG + chr3.3:64128300-64128319 MS.gene35602:CDS 40.0%
GTAGAAACACCATCATGTTG+GGG + chr3.3:64128701-64128720 MS.gene35602:CDS 40.0%
TAGAAACACCATCATGTTGG+GGG + chr3.3:64128702-64128721 MS.gene35602:CDS 40.0%
TATGGTGCTTTCTTGTTCCA+TGG + chr3.3:64130196-64130215 MS.gene35602:CDS 40.0%
TATTGGCGCTACTACGTTAA+AGG + chr3.3:64130319-64130338 MS.gene35602:CDS 40.0%
TGTGTTGTCTCAGACATTCA+TGG + chr3.3:64130153-64130172 MS.gene35602:CDS 40.0%
! ATTTTGAGCACCTCCAGTAA+TGG - chr3.3:64128752-64128771 None:intergenic 40.0%
! GCAATTTCCGAAAGGTACAA+TGG - chr3.3:64129161-64129180 None:intergenic 40.0%
!! AGAGTCTTGTTCATCATAGG+TGG + chr3.3:64129734-64129753 MS.gene35602:CDS 40.0%
!! CGAAGAGTCTTGTTCATCAT+AGG + chr3.3:64129731-64129750 MS.gene35602:CDS 40.0%
!! TTACTTCTCGGCTTTGGAAT+TGG + chr3.3:64128796-64128815 MS.gene35602:CDS 40.0%
!!! GCATCTAGTGGACTCATTTT+TGG + chr3.3:64128279-64128298 MS.gene35602:CDS 40.0%
!!! TCCGCTTTTTCAACAACTCA+CGG + chr3.3:64129562-64129581 MS.gene35602:CDS 40.0%
ACAACTCACGGGGATCAATA+TGG + chr3.3:64129574-64129593 MS.gene35602:CDS 45.0%
AGAAACACCATCATGTTGGG+GGG + chr3.3:64128703-64128722 MS.gene35602:CDS 45.0%
AGTCGAATCACATCCACACT+GGG + chr3.3:64128676-64128695 MS.gene35602:CDS 45.0%
AGTGGCTATTGTGATGGCAA+TGG + chr3.3:64129934-64129953 MS.gene35602:CDS 45.0%
CCCGTGAGTTGTTGAAAAAG+CGG - chr3.3:64129566-64129585 None:intergenic 45.0%
CGGAAATTGCTCCACCAAAA+TGG + chr3.3:64129171-64129190 MS.gene35602:CDS 45.0%
CTCTTCTTGCCTGAAACCAA+AGG + chr3.3:64130253-64130272 MS.gene35602:CDS 45.0%
CTTTCCTGAAGTCCTTGAGA+AGG + chr3.3:64128549-64128568 MS.gene35602:CDS 45.0%
GAGACAATATCGACCTCACT+TGG + chr3.3:64129523-64129542 MS.gene35602:CDS 45.0%
GATTGCAGTGGCTATTGTGA+TGG + chr3.3:64129928-64129947 MS.gene35602:intron 45.0%
GGAACAGGTAGCATATCGAA+GGG + chr3.3:64129971-64129990 MS.gene35602:CDS 45.0%
GGCTACTCCATTGTACCTTT+CGG + chr3.3:64129151-64129170 MS.gene35602:intron 45.0%
GGTAGCATATCGAAGGGAAA+TGG + chr3.3:64129977-64129996 MS.gene35602:CDS 45.0%
GGTATCATCTTTCTTGTGGG+TGG + chr3.3:64128724-64128743 MS.gene35602:CDS 45.0%
TAACCCAGCTAGATACAGTG+AGG - chr3.3:64128638-64128657 None:intergenic 45.0%
TAGTCGAATCACATCCACAC+TGG + chr3.3:64128675-64128694 MS.gene35602:CDS 45.0%
TCAACCATTGTTGATCGGGT+TGG + chr3.3:64129707-64129726 MS.gene35602:CDS 45.0%
TGCATTGTTGCAGCATCTAG+TGG + chr3.3:64128267-64128286 MS.gene35602:CDS 45.0%
TTGATGAGTGTCTACTCTGC+AGG + chr3.3:64130016-64130035 MS.gene35602:CDS 45.0%
TTGCTCTCAACATCCACTTC+TGG - chr3.3:64128222-64128241 None:intergenic 45.0%
TTGGTGGAGCAATTTCCGAA+AGG - chr3.3:64129169-64129188 None:intergenic 45.0%
! AGTGTCTACTCTGCAGGTTT+TGG + chr3.3:64130022-64130041 MS.gene35602:CDS 45.0%
! CTTAATGCTCCTCGCCATTT+TGG - chr3.3:64129188-64129207 None:intergenic 45.0%
!! CCAGCAGCATTGATCACTAT+CGG + chr3.3:64129320-64129339 MS.gene35602:CDS 45.0%
!! GGGGGTATCATCTTTCTTGT+GGG + chr3.3:64128721-64128740 MS.gene35602:CDS 45.0%
!! TCTACTCTGCAGGTTTTGGT+TGG + chr3.3:64130026-64130045 MS.gene35602:CDS 45.0%
!!! CCGCTTTTTCAACAACTCAC+GGG + chr3.3:64129563-64129582 MS.gene35602:CDS 45.0%
!!! CGCTTTTTCAACAACTCACG+GGG + chr3.3:64129564-64129583 MS.gene35602:CDS 45.0%
!!! TGCAGGTTTTGGTTGGTCAT+GGG + chr3.3:64130033-64130052 MS.gene35602:CDS 45.0%
AATCTCTCTTGGCTTAGCCG+TGG + chr3.3:64129295-64129314 MS.gene35602:CDS 50.0%
ACGTCCTCACTGTATCTAGC+TGG + chr3.3:64128631-64128650 MS.gene35602:CDS 50.0%
ATTGCTCCACCAAAATGGCG+AGG + chr3.3:64129176-64129195 MS.gene35602:CDS 50.0%
ATTGTGATGGCAATGGCGAC+TGG + chr3.3:64129941-64129960 MS.gene35602:CDS 50.0%
CAAAGCAGACACACCAGAAG+TGG + chr3.3:64128206-64128225 MS.gene35602:CDS 50.0%
CCGATAGTGATCAATGCTGC+TGG - chr3.3:64129323-64129342 None:intergenic 50.0%
CCTTGAGAAGGCTGCAAAAG+CGG + chr3.3:64128561-64128580 MS.gene35602:CDS 50.0%
CGACACACCAAACAGTTTGG+TGG + chr3.3:64129358-64129377 MS.gene35602:CDS 50.0%
CGGAACAGGTAGCATATCGA+AGG + chr3.3:64129970-64129989 MS.gene35602:CDS 50.0%
CGTCCTCACTGTATCTAGCT+GGG + chr3.3:64128632-64128651 MS.gene35602:CDS 50.0%
GATCAATGCTGCTGGAACCA+CGG - chr3.3:64129315-64129334 None:intergenic 50.0%
GATGATACCCCCCAACATGA+TGG - chr3.3:64128713-64128732 None:intergenic 50.0%
GCAACTGCTATCACCAAGTG+AGG - chr3.3:64129539-64129558 None:intergenic 50.0%
GGTCGATTACTTCTCGGCTT+TGG + chr3.3:64128790-64128809 MS.gene35602:CDS 50.0%
TCGACCAACCCGATCAACAA+TGG - chr3.3:64129714-64129733 None:intergenic 50.0%
TGTTGCCAAGCAAAGCTGCT+TGG - chr3.3:64129646-64129665 None:intergenic 50.0%
TGTTGCCGCAAAACACCCTT+GGG + chr3.3:64129265-64129284 MS.gene35602:CDS 50.0%
TTGTTGCCGCAAAACACCCT+TGG + chr3.3:64129264-64129283 MS.gene35602:CDS 50.0%
! CAAACAGTTTGGTGGAGCGT+GGG + chr3.3:64129366-64129385 MS.gene35602:CDS 50.0%
!! AATGCTCCTCGCCATTTTGG+TGG - chr3.3:64129185-64129204 None:intergenic 50.0%
!! GGGGGGTATCATCTTTCTTG+TGG + chr3.3:64128720-64128739 MS.gene35602:CDS 50.0%
!!! CTGCAGGTTTTGGTTGGTCA+TGG + chr3.3:64130032-64130051 MS.gene35602:CDS 50.0%
!!! GCAGGTTTTGGTTGGTCATG+GGG + chr3.3:64130034-64130053 MS.gene35602:CDS 50.0%
AGAGAGATTCGCCATCCCCA+AGG - chr3.3:64129284-64129303 None:intergenic 55.0%
CCACGCTCCACCAAACTGTT+TGG - chr3.3:64129368-64129387 None:intergenic 55.0%
GAGAGATTCGCCATCCCCAA+GGG - chr3.3:64129283-64129302 None:intergenic 55.0%
GCAATGGCGACTGGTGTTCA+CGG + chr3.3:64129950-64129969 MS.gene35602:CDS 55.0%
GCAGCCTTCTCAAGGACTTC+AGG - chr3.3:64128556-64128575 None:intergenic 55.0%
GGTCACCAAGCAGCTTTGCT+TGG + chr3.3:64129638-64129657 MS.gene35602:CDS 55.0%
GGTCATGGGGTCCTCTATTG+TGG + chr3.3:64130047-64130066 MS.gene35602:CDS 55.0%
GTTGCCGCAAAACACCCTTG+GGG + chr3.3:64129266-64129285 MS.gene35602:CDS 55.0%
TGGGGATGGCGAATCTCTCT+TGG + chr3.3:64129284-64129303 MS.gene35602:CDS 55.0%
! CCAAACAGTTTGGTGGAGCG+TGG + chr3.3:64129365-64129384 MS.gene35602:CDS 55.0%
! GGTGTTTCTACGTCCCAGTG+TGG - chr3.3:64128692-64128711 None:intergenic 55.0%
!! CCGCTTTTGCAGCCTTCTCA+AGG - chr3.3:64128564-64128583 None:intergenic 55.0%
!! CTTGTGGGTGGTGCCATTAC+TGG + chr3.3:64128736-64128755 MS.gene35602:CDS 55.0%
!! GGCGAGGAGCATTAAGCACA+TGG + chr3.3:64129192-64129211 MS.gene35602:CDS 55.0%
!!! AAGTTGGCGTTTTGGCTGCG+GGG + chr3.3:64129231-64129250 MS.gene35602:CDS 55.0%
!!! CAAGTTGGCGTTTTGGCTGC+GGG + chr3.3:64129230-64129249 MS.gene35602:CDS 55.0%
!!! CCATCCCCAAGGGTGTTTTG+CGG - chr3.3:64129273-64129292 None:intergenic 55.0%
!!! GCAAGTTGGCGTTTTGGCTG+CGG + chr3.3:64129229-64129248 MS.gene35602:CDS 55.0%
CCGCAAAACACCCTTGGGGA+TGG + chr3.3:64129270-64129289 MS.gene35602:CDS 60.0%
GCGACTGGTGTTCACGGAAC+AGG + chr3.3:64129956-64129975 MS.gene35602:CDS 60.0%
!! GTGGGTGGTGCCATTACTGG+AGG + chr3.3:64128739-64128758 MS.gene35602:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 64128189 64130366 64128189 ID=MS.gene35602
chr3.3 mRNA 64128189 64130366 64128189 ID=MS.gene35602.t1;Parent=MS.gene35602
chr3.3 exon 64128189 64128321 64128189 ID=MS.gene35602.t1.exon1;Parent=MS.gene35602.t1
chr3.3 CDS 64128189 64128321 64128189 ID=cds.MS.gene35602.t1;Parent=MS.gene35602.t1
chr3.3 exon 64128512 64128831 64128512 ID=MS.gene35602.t1.exon2;Parent=MS.gene35602.t1
chr3.3 CDS 64128512 64128831 64128512 ID=cds.MS.gene35602.t1;Parent=MS.gene35602.t1
chr3.3 exon 64129152 64129778 64129152 ID=MS.gene35602.t1.exon3;Parent=MS.gene35602.t1
chr3.3 CDS 64129152 64129778 64129152 ID=cds.MS.gene35602.t1;Parent=MS.gene35602.t1
chr3.3 exon 64129929 64130366 64129929 ID=MS.gene35602.t1.exon4;Parent=MS.gene35602.t1
chr3.3 CDS 64129929 64130366 64129929 ID=cds.MS.gene35602.t1;Parent=MS.gene35602.t1
Gene Sequence

>MS.gene35602

ATGGCTGGTGGAGGACTCAAAGCAGACACACCAGAAGTGGATGTTGAGAGCAAGATAACAATCTCAGTTGTCATCACTTGCATTGTTGCAGCATCTAGTGGACTCATTTTTGGATATGACCTTGGAATTTCAGGTTCTTTTTCATGTTATAACTTTCATTATAAATGTTTCTGCTATCCCCTTCTAAAGCATCAAGTATATAAGCATGATCGATATATTATACATTTATAGTCATTTAAACGAATTTTCGTTGAGATAATTGTAGGTTTTTAAGGTGTTTAAGCTAACCAATTCAATTCTTGATGGAAATGTTAAAATTTCAGGAGGTGTTACTACGATGATGCCATTCCTCGAAAAATTCTTTCCTGAAGTCCTTGAGAAGGCTGCAAAAGCGGAATCAAACACATATTGTGTGTATGATAGTCACATGTTAACATTATTCACGTCCTCACTGTATCTAGCTGGGTTAGTAACTTCTCTAATAGCTAGTCGAATCACATCCACACTGGGACGTAGAAACACCATCATGTTGGGGGGTATCATCTTTCTTGTGGGTGGTGCCATTACTGGAGGTGCTCAAAATATTGCTATGCTCATTATTGGTCGATTACTTCTCGGCTTTGGAATTGGTTTCACTAATCAAGTGAGTTATTCCGTGTAATATTTTATGATTGATTACCATTTTGAATCTTCAAAATGTAGAATTTTGACAAGTAGGTTTCTAAGTTTACGAATCAACAAATTAGTTTGGAAATTGAAGATCGCCAATCAATTTAGTTGTTTGTCAATCAATTCAATTGATGAAACTGGATGGCATGATATCTAATTATTGATAGAATTGACTAGCGAAATGATTAAATTGATTGACAATATTCAATTTTAGAGACTAATTTGACATTTATGATTTTAAAAAAAAATTATGTAAATATACAACCATTATTGAAGTATGGTGATTGATTTAAGGCTACTCCATTGTACCTTTCGGAAATTGCTCCACCAAAATGGCGAGGAGCATTAAGCACATGGTTTCAATTTTTTATGCAAGTTGGCGTTTTGGCTGCGGGGTTCATAAACTTTGTTGCCGCAAAACACCCTTGGGGATGGCGAATCTCTCTTGGCTTAGCCGTGGTTCCAGCAGCATTGATCACTATCGGCGCCTTAATTATATACGACACACCAAACAGTTTGGTGGAGCGTGGGAAGATAGATGAAGCCAGAAAAGCTTTGCATAAAATCAGAGGCTCAGACAATGTTGAACCCGAGTTAGAAGAACTTGTTAGACAATCACAATATGCAAAATCTTTGAATCAAGAGCCTTTTTTGACCATATTGGAGAGACAATATCGACCTCACTTGGTGATAGCAGTTGCTATTCCGCTTTTTCAACAACTCACGGGGATCAATATGGTTGCATTCTATGCACCTAACCTTTTTGTATCGATTGGGTTTGGTCACCAAGCAGCTTTGCTTGGCAACATTATACTTGGACTTGTTAACATTGTTTCAGTCATCGTCTTCTCAACCATTGTTGATCGGGTTGGTCGAAGAGTCTTGTTCATCATAGGTGGCATTCAGATGCTTATCAGTCAAGTAAGCTTAATACTACTCAGATTTCTATCTTTAATTCTCTCGGCACTAAATTTAGTTTAGAAATTAGATAGAGATAGTACTATATTATACACATAATTTGCATTGCGCATCTTATTATGTTACTAATTTGTGTTATCTATTGCTATGAAGATTGCAGTGGCTATTGTGATGGCAATGGCGACTGGTGTTCACGGAACAGGTAGCATATCGAAGGGAAATGGTACATTGTTATTAGTGTTGATGAGTGTCTACTCTGCAGGTTTTGGTTGGTCATGGGGTCCTCTATTGTGGATAATTCCAAGTGAAATTTTTCCTTTGAAAATCAGAACAACTGGACAAAGCATAGCTATTTCTGTGCAATTCATAACCATATTTGTGTTGTCTCAGACATTCATGGCAATGTTATGTCACTTGAAGTATGGTGCTTTCTTGTTCCATGGTACTTGGATTATTGTCATGACCCTCTTTATTATACTCTTCTTGCCTGAAACCAAAGGACTTCATTTGGATTCAATCTATGACATATGGTGTAAACACTGGTATTGGCGCTACTACGTTAAAGGAGACGTTACAAAAAATCAAAACTGA
Protein sequence

>MS.gene35602.t1

MAGGGLKADTPEVDVESKITISVVITCIVAASSGLIFGYDLGISGGVTTMMPFLEKFFPEVLEKAAKAESNTYCVYDSHMLTLFTSSLYLAGLVTSLIASRITSTLGRRNTIMLGGIIFLVGGAITGGAQNIAMLIIGRLLLGFGIGFTNQATPLYLSEIAPPKWRGALSTWFQFFMQVGVLAAGFINFVAAKHPWGWRISLGLAVVPAALITIGALIIYDTPNSLVERGKIDEARKALHKIRGSDNVEPELEELVRQSQYAKSLNQEPFLTILERQYRPHLVIAVAIPLFQQLTGINMVAFYAPNLFVSIGFGHQAALLGNIILGLVNIVSVIVFSTIVDRVGRRVLFIIGGIQMLISQIAVAIVMAMATGVHGTGSISKGNGTLLLVLMSVYSAGFGWSWGPLLWIIPSEIFPLKIRTTGQSIAISVQFITIFVLSQTFMAMLCHLKYGAFLFHGTWIIVMTLFIILFLPETKGLHLDSIYDIWCKHWYWRYYVKGDVTKNQN