Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37350.t1 | XP_013444360.1 | 96.5 | 578 | 20 | 0 | 1 | 578 | 1 | 578 | 0.00E+00 | 1176.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37350.t1 | Q43089 | 75.3 | 551 | 125 | 5 | 5 | 549 | 4 | 549 | 1.5e-255 | 883.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37350.t1 | A0A072TLX8 | 96.5 | 578 | 20 | 0 | 1 | 578 | 1 | 578 | 0.0e+00 | 1176.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050381 | MS.gene37350 | 0.840313 | 9.37E-58 | -1.69E-46 |
| MS.gene050479 | MS.gene37350 | 0.807688 | 4.47E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene37350 | -0.807741 | 4.36E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene37350 | -0.811769 | 5.93E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene37350 | 0.807985 | 3.87E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene37350 | 0.808121 | 3.62E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene37350 | 0.826359 | 2.83E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene37350 | 0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene37350 | 0.826384 | 2.80E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene37350 | -0.80287 | 4.57E-49 | -1.69E-46 |
| MS.gene053319 | MS.gene37350 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene053549 | MS.gene37350 | 0.806205 | 9.21E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene37350 | 0.807598 | 4.68E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene37350 | 0.812611 | 3.89E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene37350 | -0.801922 | 7.16E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene37350 | 0.831733 | 1.41E-55 | -1.69E-46 |
| MS.gene056076 | MS.gene37350 | 0.813641 | 2.31E-51 | -1.69E-46 |
| MS.gene056310 | MS.gene37350 | 0.807829 | 4.18E-50 | -1.69E-46 |
| MS.gene056313 | MS.gene37350 | 0.838677 | 2.50E-57 | -1.69E-46 |
| MS.gene056680 | MS.gene37350 | 0.806232 | 9.09E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene37350 | 0.812748 | 3.63E-51 | -1.69E-46 |
| MS.gene057291 | MS.gene37350 | 0.840608 | 7.85E-58 | -1.69E-46 |
| MS.gene057293 | MS.gene37350 | 0.835267 | 1.85E-56 | -1.69E-46 |
| MS.gene057720 | MS.gene37350 | 0.815455 | 9.17E-52 | -1.69E-46 |
| MS.gene058093 | MS.gene37350 | 0.800357 | 1.50E-48 | -1.69E-46 |
| MS.gene058099 | MS.gene37350 | 0.828991 | 6.61E-55 | -1.69E-46 |
| MS.gene058109 | MS.gene37350 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene37350 | 0.830835 | 2.35E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene37350 | 0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene058175 | MS.gene37350 | 0.830258 | 3.25E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene37350 | -0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene37350 | 0.827443 | 1.56E-54 | -1.69E-46 |
| MS.gene059223 | MS.gene37350 | 0.832218 | 1.07E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37350.t1 | MTR_8g017410 | 96.540 | 578 | 20 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1161 |
| MS.gene37350.t1 | MTR_8g017410 | 96.712 | 517 | 17 | 0 | 62 | 578 | 16 | 532 | 0.0 | 1034 |
| MS.gene37350.t1 | MTR_2g099950 | 77.043 | 575 | 124 | 4 | 4 | 575 | 3 | 572 | 0.0 | 913 |
| MS.gene37350.t1 | MTR_2g099950 | 78.865 | 511 | 104 | 2 | 67 | 575 | 1 | 509 | 0.0 | 847 |
| MS.gene37350.t1 | MTR_8g017410 | 97.059 | 408 | 12 | 0 | 1 | 408 | 1 | 408 | 0.0 | 830 |
| MS.gene37350.t1 | MTR_5g066380 | 63.683 | 581 | 191 | 10 | 6 | 575 | 3 | 574 | 0.0 | 751 |
| MS.gene37350.t1 | MTR_7g105050 | 54.246 | 577 | 251 | 8 | 1 | 574 | 7 | 573 | 0.0 | 631 |
| MS.gene37350.t1 | MTR_1g059700 | 54.676 | 556 | 240 | 8 | 24 | 575 | 21 | 568 | 0.0 | 623 |
| MS.gene37350.t1 | MTR_1g015910 | 55.618 | 534 | 230 | 4 | 44 | 574 | 42 | 571 | 0.0 | 611 |
| MS.gene37350.t1 | MTR_1g015970 | 54.307 | 534 | 237 | 4 | 44 | 574 | 16 | 545 | 0.0 | 595 |
| MS.gene37350.t1 | MTR_1g015910 | 54.845 | 516 | 226 | 4 | 62 | 574 | 17 | 528 | 0.0 | 575 |
| MS.gene37350.t1 | MTR_1g015980 | 50.000 | 546 | 258 | 9 | 42 | 577 | 14 | 554 | 0.0 | 536 |
| MS.gene37350.t1 | MTR_4g101630 | 48.491 | 530 | 259 | 8 | 48 | 572 | 112 | 632 | 1.68e-165 | 486 |
| MS.gene37350.t1 | MTR_3g008530 | 46.591 | 528 | 269 | 9 | 48 | 572 | 104 | 621 | 1.37e-161 | 475 |
| MS.gene37350.t1 | MTR_4g101630 | 47.776 | 517 | 256 | 8 | 61 | 572 | 13 | 520 | 2.26e-157 | 461 |
| MS.gene37350.t1 | MTR_1g015940 | 45.720 | 479 | 212 | 6 | 60 | 517 | 19 | 470 | 1.95e-140 | 416 |
| MS.gene37350.t1 | MTR_1g015920 | 39.474 | 76 | 43 | 2 | 279 | 354 | 34 | 106 | 8.84e-13 | 65.5 |
| MS.gene37350.t1 | MTR_5g075120 | 93.750 | 32 | 2 | 0 | 535 | 566 | 24 | 55 | 3.38e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37350.t1 | AT3G13790 | 65.785 | 567 | 181 | 8 | 19 | 575 | 21 | 584 | 0.0 | 752 |
| MS.gene37350.t1 | AT3G13790 | 65.256 | 567 | 181 | 9 | 19 | 575 | 21 | 581 | 0.0 | 740 |
| MS.gene37350.t1 | AT3G13790 | 66.344 | 517 | 163 | 6 | 67 | 575 | 1 | 514 | 0.0 | 691 |
| MS.gene37350.t1 | AT3G13790 | 66.344 | 517 | 163 | 6 | 67 | 575 | 1 | 514 | 0.0 | 691 |
| MS.gene37350.t1 | AT3G13790 | 66.344 | 517 | 163 | 6 | 67 | 575 | 1 | 514 | 0.0 | 691 |
| MS.gene37350.t1 | AT1G55120 | 58.390 | 584 | 220 | 7 | 5 | 578 | 7 | 577 | 0.0 | 689 |
| MS.gene37350.t1 | AT3G13784 | 56.944 | 576 | 225 | 10 | 6 | 572 | 10 | 571 | 0.0 | 662 |
| MS.gene37350.t1 | AT3G13784 | 56.597 | 576 | 227 | 10 | 6 | 572 | 10 | 571 | 0.0 | 655 |
| MS.gene37350.t1 | AT1G55120 | 60.338 | 532 | 199 | 6 | 57 | 578 | 8 | 537 | 0.0 | 652 |
| MS.gene37350.t1 | AT3G13784 | 56.424 | 576 | 225 | 11 | 6 | 572 | 10 | 568 | 0.0 | 650 |
| MS.gene37350.t1 | AT1G55120 | 60.305 | 524 | 196 | 6 | 65 | 578 | 17 | 538 | 0.0 | 645 |
| MS.gene37350.t1 | AT1G55120 | 60.190 | 525 | 197 | 6 | 64 | 578 | 40 | 562 | 0.0 | 644 |
| MS.gene37350.t1 | AT3G13784 | 58.621 | 522 | 202 | 8 | 60 | 572 | 2 | 518 | 0.0 | 624 |
| MS.gene37350.t1 | AT3G52600 | 52.830 | 583 | 253 | 10 | 4 | 571 | 6 | 581 | 0.0 | 601 |
| MS.gene37350.t1 | AT2G36190 | 52.028 | 567 | 251 | 9 | 24 | 575 | 27 | 587 | 0.0 | 582 |
| MS.gene37350.t1 | AT3G52600 | 53.817 | 524 | 224 | 8 | 62 | 571 | 8 | 527 | 0.0 | 560 |
| MS.gene37350.t1 | AT3G52600 | 53.565 | 519 | 223 | 8 | 67 | 571 | 1 | 515 | 0.0 | 550 |
| MS.gene37350.t1 | AT5G11920 | 49.533 | 535 | 257 | 8 | 48 | 575 | 17 | 545 | 0.0 | 524 |
| MS.gene37350.t1 | AT5G11920 | 48.837 | 516 | 251 | 8 | 67 | 575 | 1 | 510 | 1.49e-168 | 489 |
| MS.gene37350.t1 | AT1G62660 | 46.893 | 531 | 272 | 7 | 48 | 572 | 106 | 632 | 5.43e-162 | 477 |
| MS.gene37350.t1 | AT1G12240 | 44.343 | 548 | 294 | 7 | 32 | 572 | 105 | 648 | 4.20e-161 | 475 |
| MS.gene37350.t1 | AT1G62660 | 46.035 | 517 | 269 | 7 | 62 | 572 | 22 | 534 | 1.46e-152 | 449 |
| MS.gene37350.t1 | AT5G11920 | 52.267 | 375 | 167 | 7 | 48 | 416 | 17 | 385 | 4.18e-132 | 392 |
| MS.gene37350.t1 | AT1G62660 | 44.043 | 470 | 253 | 7 | 109 | 572 | 1 | 466 | 5.05e-127 | 382 |
| MS.gene37350.t1 | AT1G62660 | 44.043 | 470 | 253 | 7 | 109 | 572 | 1 | 466 | 5.05e-127 | 382 |
Find 118 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCTCCTTTGAGTATTT+TGG | 0.149574 | 8.4:+74834934 | None:intergenic |
| TCACTAGTTGGTTCCATTAA+TGG | 0.178086 | 8.4:+74835873 | None:intergenic |
| GATAATGATTTGACCACTTA+TGG | 0.185101 | 8.4:-74834147 | MS.gene37350:CDS |
| AAATTAATGCAAGTTCATTT+AGG | 0.188719 | 8.4:-74835845 | MS.gene37350:CDS |
| GACAAATTTGTCCCTGATAA+AGG | 0.213270 | 8.4:-74835510 | MS.gene37350:CDS |
| CTACTTTATGCTTTCAATAA+TGG | 0.214400 | 8.4:-74833686 | MS.gene37350:CDS |
| TGCTCCTCAAACCCTTTATC+AGG | 0.221497 | 8.4:+74835498 | None:intergenic |
| TTACCATTTATCCAATTCTT+TGG | 0.254575 | 8.4:+74837134 | None:intergenic |
| CCTCCAAAGAATTGGATAAA+TGG | 0.258703 | 8.4:-74837137 | MS.gene37350:intron |
| TATTAGAGAGGCTGAAGTTT+TGG | 0.273028 | 8.4:-74834513 | MS.gene37350:CDS |
| AATTAATGCAAGTTCATTTA+GGG | 0.289026 | 8.4:-74835844 | MS.gene37350:CDS |
| CAATCCTAAAGGTGCAGTTT+GGG | 0.290163 | 8.4:-74836147 | MS.gene37350:CDS |
| AGACAATTCCAAGGACAATT+TGG | 0.294017 | 8.4:-74835039 | MS.gene37350:CDS |
| TTTCAACTGATCTTGTTAAC+TGG | 0.295469 | 8.4:-74836100 | MS.gene37350:CDS |
| AAAAGTGGATTGGGACCTTT+TGG | 0.301193 | 8.4:-74834440 | MS.gene37350:CDS |
| CACTCTGTGGTAGAGAGTTT+TGG | 0.308876 | 8.4:-74833773 | MS.gene37350:CDS |
| GGTGAATTGTTGCCAATTAA+TGG | 0.309135 | 8.4:-74834917 | MS.gene37350:CDS |
| GGAAATTGGAGGATAATTAT+TGG | 0.312645 | 8.4:-74835792 | MS.gene37350:CDS |
| TTTCCCCAAACTGCACCTTT+AGG | 0.314409 | 8.4:+74836143 | None:intergenic |
| ATGAAGAAAGCACAATTAAA+TGG | 0.325446 | 8.4:-74833623 | MS.gene37350:CDS |
| GCTGCTGTGACACCATTAAT+TGG | 0.328237 | 8.4:+74834905 | None:intergenic |
| ACAATCCTAAAGGTGCAGTT+TGG | 0.332961 | 8.4:-74836148 | MS.gene37350:CDS |
| AAGTAGTGCTTTATCATTGA+TGG | 0.335089 | 8.4:+74833703 | None:intergenic |
| TCTCAACCGTCCGATATAAA+TGG | 0.343321 | 8.4:-74836050 | MS.gene37350:CDS |
| ATTTCCAACCTCCAAAGAAT+TGG | 0.344409 | 8.4:-74837145 | MS.gene37350:CDS |
| GCATGTGTTGAAGGTTAGTT+TGG | 0.349854 | 8.4:-74835583 | MS.gene37350:CDS |
| AAACATGATTATTATCTCAT+TGG | 0.352794 | 8.4:-74835552 | MS.gene37350:CDS |
| TTTACTTTCATTTATATCAA+TGG | 0.372171 | 8.4:-74837263 | MS.gene37350:CDS |
| ACAAATTTGTCCCTGATAAA+GGG | 0.372247 | 8.4:-74835509 | MS.gene37350:CDS |
| ATAATGATTTGACCACTTAT+GGG | 0.372960 | 8.4:-74834146 | MS.gene37350:CDS |
| TCATTTAGGGATCCAACAAC+TGG | 0.379967 | 8.4:-74835831 | MS.gene37350:CDS |
| GGTTAGGAAAAGATGGAAAT+TGG | 0.385170 | 8.4:-74835806 | MS.gene37350:CDS |
| CAGTTTGGGGAAATATTGTA+TGG | 0.385408 | 8.4:-74836133 | MS.gene37350:CDS |
| GAAGCTGTCATTGAGAAGTT+TGG | 0.388748 | 8.4:-74834094 | MS.gene37350:intron |
| TTTCCTAACCACCCAGTTGT+TGG | 0.392078 | 8.4:+74835819 | None:intergenic |
| GATATAAATGGTTGTTGGTC+AGG | 0.395891 | 8.4:-74836038 | MS.gene37350:CDS |
| TTAATCCATTCCCTTAGAAA+AGG | 0.402619 | 8.4:+74835909 | None:intergenic |
| AACTTCTCAACTTCCACAAC+TGG | 0.405864 | 8.4:+74834983 | None:intergenic |
| AACATGATTATTATCTCATT+GGG | 0.406129 | 8.4:-74835551 | MS.gene37350:CDS |
| TGTGGATTTGCAGATCCTAA+TGG | 0.410985 | 8.4:-74836967 | MS.gene37350:intron |
| CACCCTTTGCATTCAGCTAA+AGG | 0.411767 | 8.4:-74835696 | MS.gene37350:CDS |
| TTTGAACTTGGTGATTCATT+GGG | 0.421380 | 8.4:+74835961 | None:intergenic |
| CTGCACCTTTAGGATTGTAT+TGG | 0.421473 | 8.4:+74836153 | None:intergenic |
| GATCCAACAACTGGGTGGTT+AGG | 0.424775 | 8.4:-74835822 | MS.gene37350:CDS |
| AATGTACCAATTCTCAAAAC+AGG | 0.431232 | 8.4:+74835642 | None:intergenic |
| AGATCACAAGATTGAGTGCT+TGG | 0.441270 | 8.4:-74833649 | MS.gene37350:CDS |
| TCAAATTCTGTGTAGCCAAA+AGG | 0.442985 | 8.4:-74834474 | MS.gene37350:CDS |
| GGAAAGATGGCTGGATCTAG+TGG | 0.445642 | 8.4:+74836074 | None:intergenic |
| ACAATTTGGTTACACAAGTC+AGG | 0.447214 | 8.4:-74835025 | MS.gene37350:CDS |
| CACATCAATGAAAAGTGGAT+TGG | 0.448305 | 8.4:-74834450 | MS.gene37350:CDS |
| GGGCAAAGACAAACCTGCTT+TGG | 0.450733 | 8.4:+74834318 | None:intergenic |
| ACATGGTGAGTAGCTTCAAT+AGG | 0.450751 | 8.4:+74837233 | None:intergenic |
| GATATCAAGAAAGGATGGTC+TGG | 0.457851 | 8.4:-74835351 | MS.gene37350:CDS |
| TGTCCCTGATAAAGGGTTTG+AGG | 0.458197 | 8.4:-74835502 | MS.gene37350:CDS |
| TGACCAACAACCATTTATAT+CGG | 0.463205 | 8.4:+74836040 | None:intergenic |
| GGATCAGCCACAATACTTCA+TGG | 0.464983 | 8.4:-74836017 | MS.gene37350:CDS |
| ATTCCAGTGTATAAAATAGC+TGG | 0.469730 | 8.4:+74835987 | None:intergenic |
| CCATTTATCCAATTCTTTGG+AGG | 0.469796 | 8.4:+74837137 | None:intergenic |
| TTATCCAATTCTTTGGAGGT+TGG | 0.470239 | 8.4:+74837141 | None:intergenic |
| ACATCAATGAAAAGTGGATT+GGG | 0.472461 | 8.4:-74834449 | MS.gene37350:CDS |
| CAAATTCTGTGTAGCCAAAA+GGG | 0.475246 | 8.4:-74834473 | MS.gene37350:CDS |
| TAAGAGTAAATCCTGTCAAA+TGG | 0.478316 | 8.4:-74834961 | MS.gene37350:CDS |
| TGGGACTTATAATGATGATA+AGG | 0.479103 | 8.4:-74835532 | MS.gene37350:CDS |
| TTGCATTCAGCTAAAGGCAC+TGG | 0.481511 | 8.4:-74835690 | MS.gene37350:CDS |
| CAGCTAAAGGCACTGGAATG+TGG | 0.487107 | 8.4:-74835683 | MS.gene37350:CDS |
| TAATCCATTCCCTTAGAAAA+GGG | 0.488502 | 8.4:+74835910 | None:intergenic |
| TGATGTGAGGCATGTGTTGA+AGG | 0.495623 | 8.4:-74835592 | MS.gene37350:CDS |
| AAATGATAAGCAGTTCTGTA+AGG | 0.500173 | 8.4:+74837164 | None:intergenic |
| AGTTCTGTAAGGTTGTTTGA+AGG | 0.502878 | 8.4:+74837175 | None:intergenic |
| TTTGGCTACACAGAATTTGA+GGG | 0.509991 | 8.4:+74834477 | None:intergenic |
| TTGATGATGGGAAGAAGAGA+AGG | 0.514874 | 8.4:-74835416 | MS.gene37350:CDS |
| TGCCTTTAGCTGAATGCAAA+GGG | 0.522860 | 8.4:+74835694 | None:intergenic |
| TTCTACCAATACAATCCTAA+AGG | 0.523930 | 8.4:-74836158 | MS.gene37350:CDS |
| GGTTGAGATGGAAAGATGGC+TGG | 0.526843 | 8.4:+74836065 | None:intergenic |
| TTGTGTAACCAAATTGTCCT+TGG | 0.529012 | 8.4:+74835031 | None:intergenic |
| CGTCCGATATAAATGGTTGT+TGG | 0.529048 | 8.4:-74836043 | MS.gene37350:CDS |
| TGAAGTCCTTTGTAACTCAA+TGG | 0.530739 | 8.4:+74836188 | None:intergenic |
| ATCCAGAGTTTATCCTACAT+TGG | 0.530791 | 8.4:-74833726 | MS.gene37350:CDS |
| GTCTATAAAAGTCCCATAAG+TGG | 0.532511 | 8.4:+74834134 | None:intergenic |
| ACTGGGTGGTTAGGAAAAGA+TGG | 0.536301 | 8.4:-74835813 | MS.gene37350:CDS |
| TTATCATTGATGGCCAATGT+AGG | 0.538454 | 8.4:+74833713 | None:intergenic |
| GTTGATACAGTGGCCAGTTG+TGG | 0.539361 | 8.4:-74834996 | MS.gene37350:CDS |
| CAATCTTGTGATCTTTACAT+TGG | 0.541638 | 8.4:+74833658 | None:intergenic |
| AGCTAAAGGCACTGGAATGT+GGG | 0.543615 | 8.4:-74835682 | MS.gene37350:CDS |
| TTTATATCGGACGGTTGAGA+TGG | 0.547063 | 8.4:+74836053 | None:intergenic |
| AAGGGCACATCAATGAAAAG+TGG | 0.553430 | 8.4:-74834455 | MS.gene37350:CDS |
| TGGTAGCAAAAGAAACACTA+GGG | 0.560168 | 8.4:-74835772 | MS.gene37350:CDS |
| GCTCCTCAAACCCTTTATCA+GGG | 0.563372 | 8.4:+74835499 | None:intergenic |
| GTGCCTTTAGCTGAATGCAA+AGG | 0.565473 | 8.4:+74835693 | None:intergenic |
| CAACAACCATTTATATCGGA+CGG | 0.569338 | 8.4:+74836044 | None:intergenic |
| TTGGTAGCAAAAGAAACACT+AGG | 0.573322 | 8.4:-74835773 | MS.gene37350:CDS |
| GGACGGTTGAGATGGAAAGA+TGG | 0.576030 | 8.4:+74836061 | None:intergenic |
| GAAAGATGGCTGGATCTAGT+GGG | 0.576401 | 8.4:+74836075 | None:intergenic |
| GTTGCTGATGATATCAAGAA+AGG | 0.586411 | 8.4:-74835360 | MS.gene37350:CDS |
| CTGATGATATCAAGAAAGGA+TGG | 0.598135 | 8.4:-74835356 | MS.gene37350:CDS |
| TTTGTTACCATGAAGTATTG+TGG | 0.599608 | 8.4:+74836010 | None:intergenic |
| CATCAGAAGATAAACTCTGA+AGG | 0.599752 | 8.4:+74837201 | None:intergenic |
| TAGGAAAAGATGGAAATTGG+AGG | 0.601299 | 8.4:-74835803 | MS.gene37350:CDS |
| TGAAGTGAATAATATTAGAG+AGG | 0.608534 | 8.4:-74834525 | MS.gene37350:CDS |
| ATAGGACCATTGAGTTACAA+AGG | 0.609277 | 8.4:-74836194 | MS.gene37350:intron |
| GGCCAATGTAGGATAAACTC+TGG | 0.612364 | 8.4:+74833724 | None:intergenic |
| TGACTATATTCTCTACTATG+TGG | 0.616850 | 8.4:-74837298 | MS.gene37350:CDS |
| TGTATATGCAGACAATTCCA+AGG | 0.624497 | 8.4:-74835048 | MS.gene37350:intron |
| TTGGCTACACAGAATTTGAG+GGG | 0.624742 | 8.4:+74834478 | None:intergenic |
| TGGCCCACCAAAATACTCAA+AGG | 0.632566 | 8.4:-74834941 | MS.gene37350:CDS |
| TCTGAAGGTTTCTATAAACA+TGG | 0.633706 | 8.4:+74837216 | None:intergenic |
| ATATAAATGAAAGTAAAGAG+AGG | 0.639179 | 8.4:+74837269 | None:intergenic |
| GATATCATCAGCAACACTTG+AGG | 0.639793 | 8.4:+74835368 | None:intergenic |
| AATCCTAAAGGTGCAGTTTG+GGG | 0.643615 | 8.4:-74836146 | MS.gene37350:CDS |
| CATTTAGGGATCCAACAACT+GGG | 0.646395 | 8.4:-74835830 | MS.gene37350:CDS |
| AGTTTGGGGAAATATTGTAT+GGG | 0.646588 | 8.4:-74836132 | MS.gene37350:CDS |
| TTCACAGATTGATCACTCTG+TGG | 0.662489 | 8.4:-74833786 | MS.gene37350:intron |
| CAGGAAAACAGTTGATACAG+TGG | 0.677166 | 8.4:-74835006 | MS.gene37350:CDS |
| CATTAAATAGTGATGATGTG+AGG | 0.686721 | 8.4:-74835605 | MS.gene37350:CDS |
| CCCACCAAAATACTCAAAGG+AGG | 0.687045 | 8.4:-74834938 | MS.gene37350:CDS |
| AAAGATGGCTGGATCTAGTG+GGG | 0.700863 | 8.4:+74836076 | None:intergenic |
| TTAGGGATCCAACAACTGGG+TGG | 0.706173 | 8.4:-74835827 | MS.gene37350:CDS |
| GGTAGCAAAAGAAACACTAG+GGG | 0.722203 | 8.4:-74835771 | MS.gene37350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTTCAAAAAAAGAAAT+AGG | + | chr8.4:74833837-74833856 | None:intergenic | 10.0% |
| !! | ATATTTCAAAAAAAGAAATA+GGG | + | chr8.4:74833836-74833855 | None:intergenic | 10.0% |
| !! | TTCAAAAGTAATATAATAAA+CGG | - | chr8.4:74834257-74834276 | MS.gene37350:intron | 10.0% |
| !!! | AATTTTATTTAAATAACTAG+AGG | + | chr8.4:74836618-74836637 | None:intergenic | 10.0% |
| !!! | ATTTTATTTAAATAACTAGA+GGG | + | chr8.4:74836617-74836636 | None:intergenic | 10.0% |
| !! | AAAAAAAATATAGCTTACTT+GGG | + | chr8.4:74836032-74836051 | None:intergenic | 15.0% |
| !! | AACTAATAACAAAAATATCA+AGG | + | chr8.4:74835615-74835634 | None:intergenic | 15.0% |
| !! | ATGAATATAATGATAGTTTA+AGG | - | chr8.4:74834557-74834576 | MS.gene37350:intron | 15.0% |
| !! | ATTAAAAGAGTAAATTTACA+AGG | - | chr8.4:74836274-74836293 | MS.gene37350:intron | 15.0% |
| !! | GAAAAATTAATATAGTATAG+AGG | - | chr8.4:74834303-74834322 | MS.gene37350:intron | 15.0% |
| !! | TAAAAAAAATATAGCTTACT+TGG | + | chr8.4:74836033-74836052 | None:intergenic | 15.0% |
| !! | TTTACTTTCATTTATATCAA+TGG | - | chr8.4:74833649-74833668 | MS.gene37350:CDS | 15.0% |
| !!! | AGAGTAAAGATTTTATTAAT+TGG | - | chr8.4:74835181-74835200 | MS.gene37350:intron | 15.0% |
| !!! | ATTAATCAATTATTTTATGC+AGG | - | chr8.4:74836345-74836364 | MS.gene37350:intron | 15.0% |
| !!! | CTTTTAATTTGAATCATTAT+TGG | + | chr8.4:74836262-74836281 | None:intergenic | 15.0% |
| !!! | TCATTATATTCATATTTTAC+CGG | + | chr8.4:74834550-74834569 | None:intergenic | 15.0% |
| !!! | TGATTGTTTTTCTTATATAT+TGG | + | chr8.4:74834348-74834367 | None:intergenic | 15.0% |
| !!! | TTAATTTTATTTTCACTAGT+TGG | + | chr8.4:74835054-74835073 | None:intergenic | 15.0% |
| !!! | TTTTATTCTTTTCATAAACT+AGG | - | chr8.4:74836668-74836687 | MS.gene37350:intron | 15.0% |
| !!! | TTTTCTTGTTATGATTTATT+TGG | + | chr8.4:74834288-74834307 | None:intergenic | 15.0% |
| !! | AAAATGCATCTTTAATTAAC+AGG | - | chr8.4:74836727-74836746 | MS.gene37350:intron | 20.0% |
| !! | AAACATGATTATTATCTCAT+TGG | - | chr8.4:74835360-74835379 | MS.gene37350:CDS | 20.0% |
| !! | AAATTAATGCAAGTTCATTT+AGG | - | chr8.4:74835067-74835086 | MS.gene37350:intron | 20.0% |
| !! | AACATGATTATTATCTCATT+GGG | - | chr8.4:74835361-74835380 | MS.gene37350:CDS | 20.0% |
| !! | AATTAATGCAAGTTCATTTA+GGG | - | chr8.4:74835068-74835087 | MS.gene37350:intron | 20.0% |
| !! | ATATAAATGAAAGTAAAGAG+AGG | + | chr8.4:74833646-74833665 | None:intergenic | 20.0% |
| !! | CAAAAAAATTAAAAAGGAAG+TGG | - | chr8.4:74834523-74834542 | MS.gene37350:CDS | 20.0% |
| !! | CAAATACCAACAAAAAAATT+TGG | - | chr8.4:74836555-74836574 | MS.gene37350:intron | 20.0% |
| !! | CTATTTAACTAATTAGTTGT+AGG | - | chr8.4:74834372-74834391 | MS.gene37350:CDS | 20.0% |
| !! | TAATTTATTAGAACTCCAAA+TGG | + | chr8.4:74837094-74837113 | None:intergenic | 20.0% |
| !! | TACAATCCATAAAAAAAAGT+TGG | + | chr8.4:74836895-74836914 | None:intergenic | 20.0% |
| !! | TAGTTTATGCTAAATAGTTA+GGG | - | chr8.4:74835810-74835829 | MS.gene37350:CDS | 20.0% |
| !! | TGTGACTAATAAGATATATT+TGG | - | chr8.4:74836178-74836197 | MS.gene37350:CDS | 20.0% |
| !! | TTAGTTTATGCTAAATAGTT+AGG | - | chr8.4:74835809-74835828 | MS.gene37350:CDS | 20.0% |
| !!! | CAAATTTTGAGATATGATTA+TGG | - | chr8.4:74835447-74835466 | MS.gene37350:CDS | 20.0% |
| !!! | CATTCATTATATTTTCCATT+TGG | - | chr8.4:74837076-74837095 | MS.gene37350:intron | 20.0% |
| !!! | TTAATTTGAATCATTATTGG+AGG | + | chr8.4:74836259-74836278 | None:intergenic | 20.0% |
| !!! | TTATATATGTGACTTTTGAT+AGG | - | chr8.4:74834700-74834719 | MS.gene37350:intron | 20.0% |
| !!! | TTGTTTATATTTAAGACTAG+AGG | - | chr8.4:74837017-74837036 | MS.gene37350:intron | 20.0% |
| !!! | TTTTCTATGTGATTGTTTTT+TGG | - | chr8.4:74834656-74834675 | MS.gene37350:intron | 20.0% |
| ! | AAAAACTGTCATTCAAAGAA+TGG | - | chr8.4:74834474-74834493 | MS.gene37350:CDS | 25.0% |
| ! | AAATCACTTACTTGATCAAT+TGG | - | chr8.4:74834408-74834427 | MS.gene37350:CDS | 25.0% |
| ! | AAATTAGTTCAAGTCAACTT+TGG | + | chr8.4:74835791-74835810 | None:intergenic | 25.0% |
| ! | AACTAATTAGTTGTAGGTAT+AGG | - | chr8.4:74834378-74834397 | MS.gene37350:CDS | 25.0% |
| ! | ATAATGATTTGACCACTTAT+GGG | - | chr8.4:74836766-74836785 | MS.gene37350:intron | 25.0% |
| ! | CTACTTTATGCTTTCAATAA+TGG | - | chr8.4:74837226-74837245 | MS.gene37350:CDS | 25.0% |
| ! | GAATTTAGTCAAAACTCAAA+AGG | - | chr8.4:74834226-74834245 | MS.gene37350:intron | 25.0% |
| ! | GGAAATATATCATCAATAAG+AGG | - | chr8.4:74837038-74837057 | MS.gene37350:intron | 25.0% |
| ! | TAATAGTTAGATATGACCTA+TGG | + | chr8.4:74834159-74834178 | None:intergenic | 25.0% |
| ! | TCAAAAACTTTCTTTGATGA+TGG | - | chr8.4:74835483-74835502 | MS.gene37350:CDS | 25.0% |
| ! | TCAAATATAATCATGTGTGT+CGG | + | chr8.4:74834096-74834115 | None:intergenic | 25.0% |
| ! | TCTAATTGATTGAGCATTTA+AGG | - | chr8.4:74836846-74836865 | MS.gene37350:intron | 25.0% |
| ! | TGAAGTGAATAATATTAGAG+AGG | - | chr8.4:74836387-74836406 | MS.gene37350:intron | 25.0% |
| ! | TTACCATTTATCCAATTCTT+TGG | + | chr8.4:74833781-74833800 | None:intergenic | 25.0% |
| !! | AAAAGGGTCAGATAAATTTT+TGG | + | chr8.4:74834989-74835008 | None:intergenic | 25.0% |
| !! | AAAGGGTCAGATAAATTTTT+GGG | + | chr8.4:74834988-74835007 | None:intergenic | 25.0% |
| !! | ATGAAGAAAGCACAATTAAA+TGG | - | chr8.4:74837289-74837308 | MS.gene37350:CDS | 25.0% |
| !! | CAAAAACTTTCTTTGATGAT+GGG | - | chr8.4:74835484-74835503 | MS.gene37350:CDS | 25.0% |
| !! | GCATTTTTATAAGATAGAGT+TGG | + | chr8.4:74836714-74836733 | None:intergenic | 25.0% |
| !! | TTCATAAATTGCAACTTTTG+TGG | + | chr8.4:74836925-74836944 | None:intergenic | 25.0% |
| !!! | CTACCTTAGTTTATTTTCTA+GGG | - | chr8.4:74835690-74835709 | MS.gene37350:CDS | 25.0% |
| !!! | CTTTTCATGTCATTGTTTTT+TGG | - | chr8.4:74834603-74834622 | MS.gene37350:intron | 25.0% |
| !!! | TCTACCTTAGTTTATTTTCT+AGG | - | chr8.4:74835689-74835708 | MS.gene37350:CDS | 25.0% |
| !!! | TTTTTTCCTGTTTTGAGAAT+TGG | - | chr8.4:74835264-74835283 | MS.gene37350:intron | 25.0% |
| !!! | TTTTTTTATGGATTGTAGTG+TGG | - | chr8.4:74836898-74836917 | MS.gene37350:intron | 25.0% |
| AAATGATAAGCAGTTCTGTA+AGG | + | chr8.4:74833751-74833770 | None:intergenic | 30.0% | |
| AAATTAAAAAGGAAGTGGAC+CGG | - | chr8.4:74834528-74834547 | MS.gene37350:CDS | 30.0% | |
| AAGTAGTGCTTTATCATTGA+TGG | + | chr8.4:74837212-74837231 | None:intergenic | 30.0% | |
| AATGTACCAATTCTCAAAAC+AGG | + | chr8.4:74835273-74835292 | None:intergenic | 30.0% | |
| ACAAATTTGTCCCTGATAAA+GGG | - | chr8.4:74835403-74835422 | MS.gene37350:CDS | 30.0% | |
| AGAGAAATGAACTAACCATT+AGG | + | chr8.4:74833963-74833982 | None:intergenic | 30.0% | |
| AGGGCAAAATTTCACTAATA+AGG | - | chr8.4:74835829-74835848 | MS.gene37350:CDS | 30.0% | |
| AGTTTGGGGAAATATTGTAT+GGG | - | chr8.4:74834780-74834799 | MS.gene37350:intron | 30.0% | |
| ATGCCCTAGAAAATAAACTA+AGG | + | chr8.4:74835696-74835715 | None:intergenic | 30.0% | |
| ATTCCAGTGTATAAAATAGC+TGG | + | chr8.4:74834928-74834947 | None:intergenic | 30.0% | |
| CAATCTTGTGATCTTTACAT+TGG | + | chr8.4:74837257-74837276 | None:intergenic | 30.0% | |
| CTCAAAACAGGAAAAAAATC+AGG | + | chr8.4:74835261-74835280 | None:intergenic | 30.0% | |
| GATAATGATTTGACCACTTA+TGG | - | chr8.4:74836765-74836784 | MS.gene37350:intron | 30.0% | |
| GGAAATTGGAGGATAATTAT+TGG | - | chr8.4:74835120-74835139 | MS.gene37350:intron | 30.0% | |
| GTCACCAAAAAATCCATTAA+TGG | - | chr8.4:74835026-74835045 | MS.gene37350:CDS | 30.0% | |
| TAAGAGTAAATCCTGTCAAA+TGG | - | chr8.4:74835951-74835970 | MS.gene37350:CDS | 30.0% | |
| TAATCCATTCCCTTAGAAAA+GGG | + | chr8.4:74835005-74835024 | None:intergenic | 30.0% | |
| TCTGAAGGTTTCTATAAACA+TGG | + | chr8.4:74833699-74833718 | None:intergenic | 30.0% | |
| TGACCAACAACCATTTATAT+CGG | + | chr8.4:74834875-74834894 | None:intergenic | 30.0% | |
| TGACTATATTCTCTACTATG+TGG | - | chr8.4:74833614-74833633 | MS.gene37350:CDS | 30.0% | |
| TGGGACTTATAATGATGATA+AGG | - | chr8.4:74835380-74835399 | MS.gene37350:CDS | 30.0% | |
| TTAATCCATTCCCTTAGAAA+AGG | + | chr8.4:74835006-74835025 | None:intergenic | 30.0% | |
| TTCTACCAATACAATCCTAA+AGG | - | chr8.4:74834754-74834773 | MS.gene37350:intron | 30.0% | |
| TTTCAACTGATCTTGTTAAC+TGG | - | chr8.4:74834812-74834831 | MS.gene37350:intron | 30.0% | |
| TTTGACATGTTATGCTCAAA+TGG | - | chr8.4:74833904-74833923 | MS.gene37350:intron | 30.0% | |
| ! | AAGGGTCAGATAAATTTTTG+GGG | + | chr8.4:74834987-74835006 | None:intergenic | 30.0% |
| ! | ACATCAATGAAAAGTGGATT+GGG | - | chr8.4:74836463-74836482 | MS.gene37350:intron | 30.0% |
| ! | AGATGATGATGATGATACAA+TGG | + | chr8.4:74834048-74834067 | None:intergenic | 30.0% |
| ! | ATTTATCTGACCCTTTTCTA+AGG | - | chr8.4:74834992-74835011 | MS.gene37350:CDS | 30.0% |
| ! | CATTAAATAGTGATGATGTG+AGG | - | chr8.4:74835307-74835326 | MS.gene37350:intron | 30.0% |
| ! | TTTATCTGACCCTTTTCTAA+GGG | - | chr8.4:74834993-74835012 | MS.gene37350:CDS | 30.0% |
| ! | TTTGAACTTGGTGATTCATT+GGG | + | chr8.4:74834954-74834973 | None:intergenic | 30.0% |
| !! | AAACCAGCTATTTTATACAC+TGG | - | chr8.4:74834922-74834941 | MS.gene37350:CDS | 30.0% |
| !! | GGTATGCTATATTTTGAACT+TGG | + | chr8.4:74834966-74834985 | None:intergenic | 30.0% |
| !! | TTTGTTACCATGAAGTATTG+TGG | + | chr8.4:74834905-74834924 | None:intergenic | 30.0% |
| !! | TTTTGAACTTGGTGATTCAT+TGG | + | chr8.4:74834955-74834974 | None:intergenic | 30.0% |
| !!! | AGAGCACCAAATTTTTTTGT+TGG | + | chr8.4:74836564-74836583 | None:intergenic | 30.0% |
| !!! | GGTTCCATTAATGGATTTTT+TGG | + | chr8.4:74835033-74835052 | None:intergenic | 30.0% |
| !!! | GTTTTGAGAATTGGTACATT+TGG | - | chr8.4:74835273-74835292 | MS.gene37350:intron | 30.0% |
| ACAATTTGGTTACACAAGTC+AGG | - | chr8.4:74835887-74835906 | MS.gene37350:CDS | 35.0% | |
| ACATTTGTGTTATGCTCCAT+AGG | - | chr8.4:74834140-74834159 | MS.gene37350:CDS | 35.0% | |
| AGACAATTCCAAGGACAATT+TGG | - | chr8.4:74835873-74835892 | MS.gene37350:CDS | 35.0% | |
| AGTTCTGTAAGGTTGTTTGA+AGG | + | chr8.4:74833740-74833759 | None:intergenic | 35.0% | |
| ATAGGACCATTGAGTTACAA+AGG | - | chr8.4:74834718-74834737 | MS.gene37350:intron | 35.0% | |
| ATATGTGGATGCGTATTATG+TGG | - | chr8.4:74833927-74833946 | MS.gene37350:intron | 35.0% | |
| ATCCAGAGTTTATCCTACAT+TGG | - | chr8.4:74837186-74837205 | MS.gene37350:CDS | 35.0% | |
| ATTTCCAACCTCCAAAGAAT+TGG | - | chr8.4:74833767-74833786 | MS.gene37350:CDS | 35.0% | |
| CAAATTCTGTGTAGCCAAAA+GGG | - | chr8.4:74836439-74836458 | MS.gene37350:intron | 35.0% | |
| CAACAACCATTTATATCGGA+CGG | + | chr8.4:74834871-74834890 | None:intergenic | 35.0% | |
| CACATCAATGAAAAGTGGAT+TGG | - | chr8.4:74836462-74836481 | MS.gene37350:intron | 35.0% | |
| CAGTTTGGGGAAATATTGTA+TGG | - | chr8.4:74834779-74834798 | MS.gene37350:intron | 35.0% | |
| CATCAGAAGATAAACTCTGA+AGG | + | chr8.4:74833714-74833733 | None:intergenic | 35.0% | |
| CATTGTAAGACTTAGAGATG+TGG | + | chr8.4:74836137-74836156 | None:intergenic | 35.0% | |
| CCATTTATCCAATTCTTTGG+AGG | + | chr8.4:74833778-74833797 | None:intergenic | 35.0% | |
| CCTCCAAAGAATTGGATAAA+TGG | - | chr8.4:74833775-74833794 | MS.gene37350:CDS | 35.0% | |
| CTATGCATAATGCATGTGTT+AGG | + | chr8.4:74836991-74837010 | None:intergenic | 35.0% | |
| CTGATGATATCAAGAAAGGA+TGG | - | chr8.4:74835556-74835575 | MS.gene37350:CDS | 35.0% | |
| GACAAATTTGTCCCTGATAA+AGG | - | chr8.4:74835402-74835421 | MS.gene37350:CDS | 35.0% | |
| GAGTGATCAATCTGTGAAAA+AGG | + | chr8.4:74837124-74837143 | None:intergenic | 35.0% | |
| GATATAAATGGTTGTTGGTC+AGG | - | chr8.4:74834874-74834893 | MS.gene37350:intron | 35.0% | |
| GGTGAATTGTTGCCAATTAA+TGG | - | chr8.4:74835995-74836014 | MS.gene37350:CDS | 35.0% | |
| GGTTAGGAAAAGATGGAAAT+TGG | - | chr8.4:74835106-74835125 | MS.gene37350:intron | 35.0% | |
| GTCTATAAAAGTCCCATAAG+TGG | + | chr8.4:74836781-74836800 | None:intergenic | 35.0% | |
| GTTATGCTCAAATGGATATG+TGG | - | chr8.4:74833912-74833931 | MS.gene37350:intron | 35.0% | |
| GTTGCTGATGATATCAAGAA+AGG | - | chr8.4:74835552-74835571 | MS.gene37350:CDS | 35.0% | |
| TAGGAAAAGATGGAAATTGG+AGG | - | chr8.4:74835109-74835128 | MS.gene37350:intron | 35.0% | |
| TCAAAACTCAAAAGGCTGAA+AGG | - | chr8.4:74834234-74834253 | MS.gene37350:intron | 35.0% | |
| TCAAATTCTGTGTAGCCAAA+AGG | - | chr8.4:74836438-74836457 | MS.gene37350:intron | 35.0% | |
| TGAAGTCCTTTGTAACTCAA+TGG | + | chr8.4:74834727-74834746 | None:intergenic | 35.0% | |
| TGGTAGCAAAAGAAACACTA+GGG | - | chr8.4:74835140-74835159 | MS.gene37350:intron | 35.0% | |
| TGTATATGCAGACAATTCCA+AGG | - | chr8.4:74835864-74835883 | MS.gene37350:CDS | 35.0% | |
| TTGTGTAACCAAATTGTCCT+TGG | + | chr8.4:74835884-74835903 | None:intergenic | 35.0% | |
| TTTGGCTACACAGAATTTGA+GGG | + | chr8.4:74836438-74836457 | None:intergenic | 35.0% | |
| ! | AAGAAGAGAAGGATTTTGCT+TGG | - | chr8.4:74835507-74835526 | MS.gene37350:CDS | 35.0% |
| ! | TATTAGAGAGGCTGAAGTTT+TGG | - | chr8.4:74836399-74836418 | MS.gene37350:intron | 35.0% |
| ! | TCACTAGTTGGTTCCATTAA+TGG | + | chr8.4:74835042-74835061 | None:intergenic | 35.0% |
| ! | TTATCATTGATGGCCAATGT+AGG | + | chr8.4:74837202-74837221 | None:intergenic | 35.0% |
| ! | TTATCCAATTCTTTGGAGGT+TGG | + | chr8.4:74833774-74833793 | None:intergenic | 35.0% |
| ! | TTATGGGACTTTTATAGACG+TGG | - | chr8.4:74836782-74836801 | MS.gene37350:intron | 35.0% |
| ! | TTCACCTCCTTTGAGTATTT+TGG | + | chr8.4:74835981-74836000 | None:intergenic | 35.0% |
| ! | TTGGTAGCAAAAGAAACACT+AGG | - | chr8.4:74835139-74835158 | MS.gene37350:intron | 35.0% |
| ! | TTTTCATTGATGTGCCCTTT+TGG | + | chr8.4:74836456-74836475 | None:intergenic | 35.0% |
| !! | TTTTGGCTACACAGAATTTG+AGG | + | chr8.4:74836439-74836458 | None:intergenic | 35.0% |
| !!! | CTGCTAGTTTTTGCTTCAAA+GGG | - | chr8.4:74836496-74836515 | MS.gene37350:intron | 35.0% |
| !!! | GATGCGCCAACTTTTTTTTA+TGG | - | chr8.4:74836886-74836905 | MS.gene37350:intron | 35.0% |
| AACTTCTCAACTTCCACAAC+TGG | + | chr8.4:74835932-74835951 | None:intergenic | 40.0% | |
| ACATGGTGAGTAGCTTCAAT+AGG | + | chr8.4:74833682-74833701 | None:intergenic | 40.0% | |
| AGATCACAAGATTGAGTGCT+TGG | - | chr8.4:74837263-74837282 | MS.gene37350:CDS | 40.0% | |
| CATTTAGGGATCCAACAACT+GGG | - | chr8.4:74835082-74835101 | MS.gene37350:intron | 40.0% | |
| CGTCCGATATAAATGGTTGT+TGG | - | chr8.4:74834869-74834888 | MS.gene37350:intron | 40.0% | |
| GAAGCTGTCATTGAGAAGTT+TGG | - | chr8.4:74836818-74836837 | MS.gene37350:intron | 40.0% | |
| GATATCAAGAAAGGATGGTC+TGG | - | chr8.4:74835561-74835580 | MS.gene37350:CDS | 40.0% | |
| GATATCATCAGCAACACTTG+AGG | + | chr8.4:74835547-74835566 | None:intergenic | 40.0% | |
| GGTAGCAAAAGAAACACTAG+GGG | - | chr8.4:74835141-74835160 | MS.gene37350:intron | 40.0% | |
| TCATTTAGGGATCCAACAAC+TGG | - | chr8.4:74835081-74835100 | MS.gene37350:intron | 40.0% | |
| TCTCAACCGTCCGATATAAA+TGG | - | chr8.4:74834862-74834881 | MS.gene37350:intron | 40.0% | |
| TGCCTTTAGCTGAATGCAAA+GGG | + | chr8.4:74835221-74835240 | None:intergenic | 40.0% | |
| TGTGGATTTGCAGATCCTAA+TGG | - | chr8.4:74833945-74833964 | MS.gene37350:intron | 40.0% | |
| TTCACAGATTGATCACTCTG+TGG | - | chr8.4:74837126-74837145 | MS.gene37350:intron | 40.0% | |
| TTCTCATGCTTGATCTTAGC+TGG | + | chr8.4:74835765-74835784 | None:intergenic | 40.0% | |
| TTGGCTACACAGAATTTGAG+GGG | + | chr8.4:74836437-74836456 | None:intergenic | 40.0% | |
| TTTATATCGGACGGTTGAGA+TGG | + | chr8.4:74834862-74834881 | None:intergenic | 40.0% | |
| ! | AAGGGCACATCAATGAAAAG+TGG | - | chr8.4:74836457-74836476 | MS.gene37350:intron | 40.0% |
| ! | AATCCTAAAGGTGCAGTTTG+GGG | - | chr8.4:74834766-74834785 | MS.gene37350:intron | 40.0% |
| ! | ACAATCCTAAAGGTGCAGTT+TGG | - | chr8.4:74834764-74834783 | MS.gene37350:intron | 40.0% |
| ! | AGAGAAGGATTTTGCTTGGA+TGG | - | chr8.4:74835511-74835530 | MS.gene37350:CDS | 40.0% |
| ! | CAATCCTAAAGGTGCAGTTT+GGG | - | chr8.4:74834765-74834784 | MS.gene37350:intron | 40.0% |
| ! | CAGGAAAACAGTTGATACAG+TGG | - | chr8.4:74835906-74835925 | MS.gene37350:CDS | 40.0% |
| ! | GAGAAGGATTTTGCTTGGAT+GGG | - | chr8.4:74835512-74835531 | MS.gene37350:CDS | 40.0% |
| ! | GCATGTGTTGAAGGTTAGTT+TGG | - | chr8.4:74835329-74835348 | MS.gene37350:intron | 40.0% |
| ! | TCTTTTGTAGTGACCAAAGC+AGG | - | chr8.4:74836581-74836600 | MS.gene37350:intron | 40.0% |
| !! | ACCTCCTTTGAGTATTTTGG+TGG | + | chr8.4:74835978-74835997 | None:intergenic | 40.0% |
| !! | CCTTTGAAGCAAAAACTAGC+AGG | + | chr8.4:74836498-74836517 | None:intergenic | 40.0% |
| !! | CTGCACCTTTAGGATTGTAT+TGG | + | chr8.4:74834762-74834781 | None:intergenic | 40.0% |
| !! | TTGATGATGGGAAGAAGAGA+AGG | - | chr8.4:74835496-74835515 | MS.gene37350:CDS | 40.0% |
| !!! | AAAAGTGGATTGGGACCTTT+TGG | - | chr8.4:74836472-74836491 | MS.gene37350:intron | 40.0% |
| !!! | AGGCTGAAGTTTTGGAGAAT+TGG | - | chr8.4:74836407-74836426 | MS.gene37350:intron | 40.0% |
| !!! | CCTCCTTTGAGTATTTTGGT+GGG | + | chr8.4:74835977-74835996 | None:intergenic | 40.0% |
| !!! | CCTGCTAGTTTTTGCTTCAA+AGG | - | chr8.4:74836495-74836514 | MS.gene37350:intron | 40.0% |
| !!! | TAGAGAGTTTTGGAGGAGAA+GGG | - | chr8.4:74837149-74837168 | MS.gene37350:CDS | 40.0% |
| AAAGATGGCTGGATCTAGTG+GGG | + | chr8.4:74834839-74834858 | None:intergenic | 45.0% | |
| ACTGGGTGGTTAGGAAAAGA+TGG | - | chr8.4:74835099-74835118 | MS.gene37350:intron | 45.0% | |
| CACCCTTTGCATTCAGCTAA+AGG | - | chr8.4:74835216-74835235 | MS.gene37350:intron | 45.0% | |
| CCCACCAAAATACTCAAAGG+AGG | - | chr8.4:74835974-74835993 | MS.gene37350:CDS | 45.0% | |
| GAAAGATGGCTGGATCTAGT+GGG | + | chr8.4:74834840-74834859 | None:intergenic | 45.0% | |
| GCAAAAACTAGCAGGCCAAA+AGG | + | chr8.4:74836490-74836509 | None:intergenic | 45.0% | |
| GCTCCTCAAACCCTTTATCA+GGG | + | chr8.4:74835416-74835435 | None:intergenic | 45.0% | |
| GCTGCTGTGACACCATTAAT+TGG | + | chr8.4:74836010-74836029 | None:intergenic | 45.0% | |
| GGATCAGCCACAATACTTCA+TGG | - | chr8.4:74834895-74834914 | MS.gene37350:intron | 45.0% | |
| GGCCAATGTAGGATAAACTC+TGG | + | chr8.4:74837191-74837210 | None:intergenic | 45.0% | |
| GTGCCTTTAGCTGAATGCAA+AGG | + | chr8.4:74835222-74835241 | None:intergenic | 45.0% | |
| TGATGTGAGGCATGTGTTGA+AGG | - | chr8.4:74835320-74835339 | MS.gene37350:intron | 45.0% | |
| TGCTCCTCAAACCCTTTATC+AGG | + | chr8.4:74835417-74835436 | None:intergenic | 45.0% | |
| TGGCCCACCAAAATACTCAA+AGG | - | chr8.4:74835971-74835990 | MS.gene37350:CDS | 45.0% | |
| TGTCCCTGATAAAGGGTTTG+AGG | - | chr8.4:74835410-74835429 | MS.gene37350:CDS | 45.0% | |
| TTTCCCCAAACTGCACCTTT+AGG | + | chr8.4:74834772-74834791 | None:intergenic | 45.0% | |
| TTTCCTAACCACCCAGTTGT+TGG | + | chr8.4:74835096-74835115 | None:intergenic | 45.0% | |
| ! | CACTCTGTGGTAGAGAGTTT+TGG | - | chr8.4:74837139-74837158 | MS.gene37350:CDS | 45.0% |
| ! | GGTCTGGAATTCATGTGAGT+TGG | - | chr8.4:74835577-74835596 | MS.gene37350:CDS | 45.0% |
| ! | TTGCATTCAGCTAAAGGCAC+TGG | - | chr8.4:74835222-74835241 | MS.gene37350:intron | 45.0% |
| !! | AGCTAAAGGCACTGGAATGT+GGG | - | chr8.4:74835230-74835249 | MS.gene37350:intron | 45.0% |
| !! | ATTTTGGTGGGCCATTTGAC+AGG | + | chr8.4:74835965-74835984 | None:intergenic | 45.0% |
| !! | CTGACCCTTTTCTAAGGGAA+TGG | - | chr8.4:74834998-74835017 | MS.gene37350:CDS | 45.0% |
| !! | TCTGTGGTAGAGAGTTTTGG+AGG | - | chr8.4:74837142-74837161 | MS.gene37350:CDS | 45.0% |
| !!! | GTAGAGAGTTTTGGAGGAGA+AGG | - | chr8.4:74837148-74837167 | MS.gene37350:CDS | 45.0% |
| !! | ATTAATCAAAAAAATTAAAA+AGG | - | chr8.4:74834517-74834536 | MS.gene37350:CDS | 5.0% |
| GATCCAACAACTGGGTGGTT+AGG | - | chr8.4:74835090-74835109 | MS.gene37350:intron | 50.0% | |
| GGAAAGATGGCTGGATCTAG+TGG | + | chr8.4:74834841-74834860 | None:intergenic | 50.0% | |
| GGACGGTTGAGATGGAAAGA+TGG | + | chr8.4:74834854-74834873 | None:intergenic | 50.0% | |
| GGGCAAAGACAAACCTGCTT+TGG | + | chr8.4:74836597-74836616 | None:intergenic | 50.0% | |
| GGTTGAGATGGAAAGATGGC+TGG | + | chr8.4:74834850-74834869 | None:intergenic | 50.0% | |
| GTTGATACAGTGGCCAGTTG+TGG | - | chr8.4:74835916-74835935 | MS.gene37350:CDS | 50.0% | |
| TTAGGGATCCAACAACTGGG+TGG | - | chr8.4:74835085-74835104 | MS.gene37350:intron | 50.0% | |
| !! | CAGCTAAAGGCACTGGAATG+TGG | - | chr8.4:74835229-74835248 | MS.gene37350:intron | 50.0% |
| !!! | GAGTTTTGGAGGAGAAGGGA+AGG | - | chr8.4:74837153-74837172 | MS.gene37350:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 74833613 | 74837321 | 74833613 | ID=MS.gene37350 |
| chr8.4 | mRNA | 74833613 | 74837321 | 74833613 | ID=MS.gene37350.t1;Parent=MS.gene37350 |
| chr8.4 | exon | 74837138 | 74837321 | 74837138 | ID=MS.gene37350.t1.exon1;Parent=MS.gene37350.t1 |
| chr8.4 | CDS | 74837138 | 74837321 | 74837138 | ID=cds.MS.gene37350.t1;Parent=MS.gene37350.t1 |
| chr8.4 | exon | 74836968 | 74836976 | 74836968 | ID=MS.gene37350.t1.exon2;Parent=MS.gene37350.t1 |
| chr8.4 | CDS | 74836968 | 74836976 | 74836968 | ID=cds.MS.gene37350.t1;Parent=MS.gene37350.t1 |
| chr8.4 | exon | 74835344 | 74836212 | 74835344 | ID=MS.gene37350.t1.exon3;Parent=MS.gene37350.t1 |
| chr8.4 | CDS | 74835344 | 74836212 | 74835344 | ID=cds.MS.gene37350.t1;Parent=MS.gene37350.t1 |
| chr8.4 | exon | 74834901 | 74835059 | 74834901 | ID=MS.gene37350.t1.exon4;Parent=MS.gene37350.t1 |
| chr8.4 | CDS | 74834901 | 74835059 | 74834901 | ID=cds.MS.gene37350.t1;Parent=MS.gene37350.t1 |
| chr8.4 | exon | 74834332 | 74834567 | 74834332 | ID=MS.gene37350.t1.exon5;Parent=MS.gene37350.t1 |
| chr8.4 | CDS | 74834332 | 74834567 | 74834332 | ID=cds.MS.gene37350.t1;Parent=MS.gene37350.t1 |
| chr8.4 | exon | 74834095 | 74834185 | 74834095 | ID=MS.gene37350.t1.exon6;Parent=MS.gene37350.t1 |
| chr8.4 | CDS | 74834095 | 74834185 | 74834095 | ID=cds.MS.gene37350.t1;Parent=MS.gene37350.t1 |
| chr8.4 | exon | 74833613 | 74833801 | 74833613 | ID=MS.gene37350.t1.exon7;Parent=MS.gene37350.t1 |
| chr8.4 | CDS | 74833613 | 74833801 | 74833613 | ID=cds.MS.gene37350.t1;Parent=MS.gene37350.t1 |
| Gene Sequence |
| Protein sequence |
