Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45224.t1 | XP_003621331.1 | 94.6 | 367 | 19 | 1 | 1 | 366 | 1 | 367 | 1.30E-200 | 708.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45224.t1 | P93324 | 61.6 | 372 | 134 | 3 | 2 | 366 | 3 | 372 | 1.9e-131 | 470.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45224.t1 | G7L359 | 94.6 | 367 | 19 | 1 | 1 | 366 | 1 | 367 | 9.7e-201 | 708.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049611 | MS.gene45224 | 0.821903 | 3.15E-53 | -1.69E-46 |
| MS.gene049634 | MS.gene45224 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene45224 | 0.80456 | 2.04E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene45224 | 0.801152 | 1.03E-48 | -1.69E-46 |
| MS.gene05079 | MS.gene45224 | 0.809837 | 1.55E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene45224 | 0.824329 | 8.56E-54 | -1.69E-46 |
| MS.gene05104 | MS.gene45224 | 0.807315 | 5.37E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene45224 | 0.805833 | 1.10E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene45224 | 0.846214 | 2.50E-59 | -1.69E-46 |
| MS.gene051364 | MS.gene45224 | 0.807841 | 4.15E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene45224 | 0.810253 | 1.26E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene45224 | 0.846789 | 1.74E-59 | -1.69E-46 |
| MS.gene051651 | MS.gene45224 | 0.80649 | 8.02E-50 | -1.69E-46 |
| MS.gene051863 | MS.gene45224 | 0.812643 | 3.82E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene45224 | 0.821918 | 3.13E-53 | -1.69E-46 |
| MS.gene053488 | MS.gene45224 | 0.828125 | 1.07E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene45224 | 0.818035 | 2.42E-52 | -1.69E-46 |
| MS.gene053887 | MS.gene45224 | 0.808921 | 2.44E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene45224 | 0.81449 | 1.50E-51 | -1.69E-46 |
| MS.gene054707 | MS.gene45224 | 0.8158 | 7.68E-52 | -1.69E-46 |
| MS.gene054708 | MS.gene45224 | 0.815081 | 1.11E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene45224 | 0.81563 | 8.38E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene45224 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene055202 | MS.gene45224 | 0.802089 | 6.62E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene45224 | 0.869885 | 2.21E-66 | -1.69E-46 |
| MS.gene056856 | MS.gene45224 | 0.846602 | 1.96E-59 | -1.69E-46 |
| MS.gene056857 | MS.gene45224 | 0.808447 | 3.08E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene45224 | 0.834685 | 2.60E-56 | -1.69E-46 |
| MS.gene057549 | MS.gene45224 | 0.898382 | 5.60E-77 | -1.69E-46 |
| MS.gene058067 | MS.gene45224 | 0.803425 | 3.51E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene45224 | 0.84356 | 1.30E-58 | -1.69E-46 |
| MS.gene058093 | MS.gene45224 | 0.851297 | 9.73E-61 | -1.69E-46 |
| MS.gene058099 | MS.gene45224 | 0.870489 | 1.40E-66 | -1.69E-46 |
| MS.gene058171 | MS.gene45224 | 0.806268 | 8.93E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene45224 | 0.80992 | 1.49E-50 | -1.69E-46 |
| MS.gene058268 | MS.gene45224 | 0.805103 | 1.57E-49 | -1.69E-46 |
| MS.gene058382 | MS.gene45224 | 0.807322 | 5.35E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene45224 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene45224 | 0.819972 | 8.77E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45224.t1 | MTR_7g011990 | 94.550 | 367 | 19 | 1 | 1 | 366 | 1 | 367 | 0.0 | 720 |
| MS.gene45224.t1 | MTR_7g011900 | 79.570 | 372 | 68 | 4 | 1 | 366 | 1 | 370 | 0.0 | 612 |
| MS.gene45224.t1 | MTR_7g012020 | 73.713 | 369 | 91 | 3 | 3 | 366 | 2 | 369 | 0.0 | 574 |
| MS.gene45224.t1 | MTR_7g012040 | 75.068 | 369 | 85 | 3 | 3 | 366 | 2 | 368 | 0.0 | 570 |
| MS.gene45224.t1 | MTR_7g012090 | 69.681 | 376 | 103 | 4 | 1 | 366 | 1 | 375 | 0.0 | 533 |
| MS.gene45224.t1 | MTR_7g012070 | 68.617 | 376 | 107 | 4 | 1 | 366 | 1 | 375 | 0.0 | 531 |
| MS.gene45224.t1 | MTR_2g055940 | 67.116 | 371 | 109 | 4 | 1 | 366 | 1 | 363 | 0.0 | 516 |
| MS.gene45224.t1 | MTR_1g096310 | 61.559 | 372 | 134 | 3 | 2 | 366 | 3 | 372 | 3.38e-171 | 482 |
| MS.gene45224.t1 | MTR_7g012020 | 74.909 | 275 | 63 | 3 | 3 | 272 | 2 | 275 | 2.18e-151 | 429 |
| MS.gene45224.t1 | MTR_7g012020 | 75.397 | 252 | 56 | 3 | 3 | 249 | 2 | 252 | 5.20e-138 | 393 |
| MS.gene45224.t1 | MTR_1g036460 | 50.135 | 371 | 173 | 5 | 5 | 366 | 3 | 370 | 1.96e-131 | 380 |
| MS.gene45224.t1 | MTR_1g036490 | 48.787 | 371 | 178 | 5 | 5 | 366 | 3 | 370 | 1.41e-129 | 376 |
| MS.gene45224.t1 | MTR_3g021430 | 54.391 | 353 | 151 | 6 | 20 | 366 | 9 | 357 | 6.51e-126 | 366 |
| MS.gene45224.t1 | MTR_3g021440 | 53.541 | 353 | 154 | 6 | 20 | 366 | 22 | 370 | 9.59e-124 | 361 |
| MS.gene45224.t1 | MTR_1g036510 | 49.326 | 371 | 175 | 6 | 5 | 366 | 18 | 384 | 1.63e-121 | 356 |
| MS.gene45224.t1 | MTR_3g092900 | 47.727 | 352 | 175 | 6 | 20 | 366 | 16 | 363 | 1.31e-108 | 322 |
| MS.gene45224.t1 | MTR_5g098170 | 42.179 | 358 | 192 | 8 | 18 | 366 | 12 | 363 | 2.12e-94 | 286 |
| MS.gene45224.t1 | MTR_7g118300 | 41.304 | 368 | 205 | 8 | 5 | 366 | 13 | 375 | 1.53e-91 | 279 |
| MS.gene45224.t1 | MTR_0591s0010 | 40.157 | 381 | 209 | 10 | 1 | 366 | 1 | 377 | 1.80e-91 | 279 |
| MS.gene45224.t1 | MTR_7g118320 | 41.047 | 363 | 202 | 7 | 12 | 366 | 4 | 362 | 3.73e-88 | 270 |
| MS.gene45224.t1 | MTR_8g068690 | 39.227 | 362 | 208 | 8 | 13 | 366 | 19 | 376 | 2.33e-85 | 263 |
| MS.gene45224.t1 | MTR_8g068750 | 39.216 | 357 | 205 | 8 | 18 | 366 | 25 | 377 | 1.32e-84 | 261 |
| MS.gene45224.t1 | MTR_1g050220 | 43.333 | 330 | 128 | 6 | 25 | 346 | 6 | 284 | 1.10e-83 | 256 |
| MS.gene45224.t1 | MTR_1g036510 | 49.632 | 272 | 125 | 5 | 5 | 268 | 18 | 285 | 4.92e-81 | 249 |
| MS.gene45224.t1 | MTR_8g068870 | 39.118 | 340 | 196 | 6 | 34 | 366 | 28 | 363 | 9.95e-81 | 251 |
| MS.gene45224.t1 | MTR_8g068570 | 40.432 | 324 | 155 | 10 | 18 | 333 | 25 | 318 | 7.69e-73 | 229 |
| MS.gene45224.t1 | MTR_6g078850 | 39.155 | 355 | 203 | 8 | 20 | 365 | 32 | 382 | 2.24e-70 | 228 |
| MS.gene45224.t1 | MTR_8g024160 | 43.446 | 267 | 140 | 5 | 104 | 366 | 69 | 328 | 3.61e-70 | 223 |
| MS.gene45224.t1 | MTR_6g060290 | 61.081 | 185 | 52 | 5 | 1 | 180 | 1 | 170 | 2.10e-68 | 213 |
| MS.gene45224.t1 | MTR_1g036510 | 47.410 | 251 | 120 | 5 | 5 | 247 | 18 | 264 | 3.14e-68 | 216 |
| MS.gene45224.t1 | MTR_2g072790 | 37.391 | 345 | 197 | 10 | 12 | 347 | 2 | 336 | 2.36e-65 | 211 |
| MS.gene45224.t1 | MTR_8g068730 | 34.540 | 359 | 187 | 10 | 18 | 366 | 25 | 345 | 8.80e-61 | 199 |
| MS.gene45224.t1 | MTR_3g096050 | 35.876 | 354 | 203 | 9 | 25 | 366 | 17 | 358 | 1.85e-58 | 193 |
| MS.gene45224.t1 | MTR_8g068690 | 38.462 | 260 | 150 | 6 | 18 | 270 | 24 | 280 | 3.46e-55 | 183 |
| MS.gene45224.t1 | MTR_3g096070 | 35.207 | 338 | 175 | 9 | 25 | 351 | 17 | 321 | 1.88e-53 | 180 |
| MS.gene45224.t1 | MTR_3g083620 | 33.438 | 320 | 197 | 9 | 38 | 351 | 38 | 347 | 3.31e-49 | 169 |
| MS.gene45224.t1 | MTR_0017s0100 | 33.333 | 321 | 197 | 10 | 40 | 352 | 44 | 355 | 1.69e-47 | 165 |
| MS.gene45224.t1 | MTR_8g068600 | 35.547 | 256 | 148 | 6 | 45 | 286 | 27 | 279 | 2.49e-46 | 159 |
| MS.gene45224.t1 | MTR_0079s0070 | 40.796 | 201 | 111 | 5 | 157 | 352 | 124 | 321 | 4.03e-45 | 158 |
| MS.gene45224.t1 | MTR_4g038440 | 41.000 | 200 | 112 | 5 | 157 | 352 | 158 | 355 | 1.25e-44 | 157 |
| MS.gene45224.t1 | MTR_1g076940 | 29.688 | 320 | 212 | 6 | 40 | 351 | 33 | 347 | 2.53e-43 | 154 |
| MS.gene45224.t1 | MTR_5g074600 | 29.167 | 312 | 203 | 9 | 64 | 365 | 55 | 358 | 1.20e-42 | 152 |
| MS.gene45224.t1 | MTR_3g096050 | 37.450 | 251 | 142 | 6 | 25 | 268 | 17 | 259 | 1.13e-41 | 147 |
| MS.gene45224.t1 | MTR_4g033015 | 31.487 | 343 | 207 | 10 | 39 | 365 | 32 | 362 | 6.56e-41 | 147 |
| MS.gene45224.t1 | MTR_8g068740 | 31.985 | 272 | 143 | 8 | 18 | 282 | 25 | 261 | 1.82e-40 | 144 |
| MS.gene45224.t1 | MTR_4g033200 | 31.195 | 343 | 208 | 10 | 39 | 365 | 32 | 362 | 5.66e-40 | 145 |
| MS.gene45224.t1 | MTR_7g014570 | 28.012 | 332 | 220 | 7 | 40 | 365 | 33 | 351 | 9.50e-40 | 144 |
| MS.gene45224.t1 | MTR_5g074680 | 28.617 | 311 | 208 | 8 | 61 | 365 | 57 | 359 | 9.66e-39 | 142 |
| MS.gene45224.t1 | MTR_5g074580 | 28.912 | 294 | 198 | 6 | 77 | 365 | 72 | 359 | 1.20e-37 | 139 |
| MS.gene45224.t1 | MTR_4g033150 | 30.029 | 343 | 212 | 10 | 39 | 365 | 32 | 362 | 1.95e-37 | 138 |
| MS.gene45224.t1 | MTR_4g088345 | 26.706 | 337 | 228 | 7 | 37 | 365 | 30 | 355 | 2.24e-37 | 138 |
| MS.gene45224.t1 | MTR_4g088340 | 26.113 | 337 | 230 | 6 | 37 | 365 | 7 | 332 | 4.43e-37 | 137 |
| MS.gene45224.t1 | MTR_4g088200 | 29.179 | 329 | 218 | 8 | 33 | 352 | 26 | 348 | 7.33e-37 | 137 |
| MS.gene45224.t1 | MTR_7g024520 | 28.920 | 287 | 180 | 9 | 80 | 360 | 73 | 341 | 2.28e-36 | 135 |
| MS.gene45224.t1 | MTR_7g014510 | 26.048 | 334 | 229 | 8 | 40 | 365 | 33 | 356 | 5.86e-36 | 134 |
| MS.gene45224.t1 | MTR_4g079160 | 35.714 | 196 | 122 | 2 | 161 | 352 | 147 | 342 | 7.44e-36 | 134 |
| MS.gene45224.t1 | MTR_7g024500 | 28.938 | 273 | 174 | 8 | 80 | 346 | 73 | 331 | 1.15e-35 | 133 |
| MS.gene45224.t1 | MTR_8g068620 | 50.909 | 110 | 54 | 0 | 160 | 269 | 2 | 111 | 1.20e-34 | 124 |
| MS.gene45224.t1 | MTR_5g074540 | 31.489 | 235 | 155 | 3 | 136 | 365 | 107 | 340 | 4.33e-34 | 129 |
| MS.gene45224.t1 | MTR_4g088190 | 29.226 | 349 | 220 | 9 | 33 | 365 | 26 | 363 | 7.12e-33 | 126 |
| MS.gene45224.t1 | MTR_5g074610 | 33.929 | 168 | 107 | 2 | 201 | 365 | 159 | 325 | 1.43e-29 | 116 |
| MS.gene45224.t1 | MTR_1g076930 | 30.290 | 241 | 149 | 8 | 37 | 268 | 7 | 237 | 3.34e-29 | 113 |
| MS.gene45224.t1 | MTR_4g033170 | 28.060 | 335 | 221 | 9 | 40 | 365 | 33 | 356 | 1.01e-27 | 112 |
| MS.gene45224.t1 | MTR_4g033085 | 28.024 | 339 | 218 | 11 | 39 | 365 | 32 | 356 | 1.70e-25 | 105 |
| MS.gene45224.t1 | MTR_4g038440 | 41.593 | 113 | 65 | 1 | 157 | 268 | 158 | 270 | 1.31e-22 | 96.3 |
| MS.gene45224.t1 | MTR_8g068760 | 44.000 | 100 | 54 | 2 | 268 | 366 | 135 | 233 | 2.23e-20 | 89.4 |
| MS.gene45224.t1 | MTR_6g060280 | 57.534 | 73 | 25 | 2 | 220 | 287 | 1 | 72 | 1.51e-18 | 79.7 |
| MS.gene45224.t1 | MTR_0794s0020 | 27.753 | 227 | 142 | 7 | 39 | 253 | 32 | 248 | 7.59e-18 | 82.4 |
| MS.gene45224.t1 | MTR_8g068580 | 45.652 | 92 | 48 | 2 | 276 | 366 | 43 | 133 | 2.21e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45224.t1 | AT5G54160 | 48.538 | 342 | 170 | 4 | 20 | 358 | 16 | 354 | 2.13e-111 | 330 |
| MS.gene45224.t1 | AT1G77520 | 39.437 | 355 | 200 | 8 | 24 | 366 | 30 | 381 | 2.48e-83 | 258 |
| MS.gene45224.t1 | AT1G51990 | 37.119 | 361 | 217 | 5 | 12 | 365 | 4 | 361 | 3.87e-82 | 254 |
| MS.gene45224.t1 | AT1G51990 | 36.842 | 361 | 218 | 5 | 12 | 365 | 4 | 361 | 5.05e-81 | 252 |
| MS.gene45224.t1 | AT1G33030 | 38.244 | 353 | 207 | 8 | 20 | 366 | 3 | 350 | 3.93e-78 | 244 |
| MS.gene45224.t1 | AT1G63140 | 39.612 | 361 | 199 | 10 | 20 | 366 | 26 | 381 | 1.26e-74 | 236 |
| MS.gene45224.t1 | AT1G21100 | 41.880 | 351 | 183 | 10 | 20 | 356 | 21 | 364 | 1.96e-74 | 235 |
| MS.gene45224.t1 | AT1G63140 | 39.612 | 361 | 199 | 10 | 20 | 366 | 46 | 401 | 2.36e-74 | 236 |
| MS.gene45224.t1 | AT1G21130 | 41.226 | 359 | 188 | 11 | 14 | 356 | 13 | 364 | 4.11e-73 | 232 |
| MS.gene45224.t1 | AT1G21110 | 41.595 | 351 | 184 | 10 | 20 | 356 | 21 | 364 | 1.06e-71 | 228 |
| MS.gene45224.t1 | AT5G53810 | 39.474 | 342 | 193 | 7 | 37 | 366 | 39 | 378 | 1.20e-71 | 228 |
| MS.gene45224.t1 | AT1G77530 | 38.873 | 355 | 202 | 9 | 24 | 366 | 30 | 381 | 1.50e-71 | 228 |
| MS.gene45224.t1 | AT1G21120 | 41.026 | 351 | 186 | 10 | 20 | 356 | 21 | 364 | 2.18e-70 | 225 |
| MS.gene45224.t1 | AT1G21120 | 41.026 | 351 | 186 | 10 | 20 | 356 | 69 | 412 | 8.32e-70 | 225 |
| MS.gene45224.t1 | AT1G76790 | 38.315 | 368 | 201 | 10 | 17 | 366 | 6 | 365 | 1.37e-67 | 218 |
| MS.gene45224.t1 | AT3G53140 | 34.857 | 350 | 203 | 8 | 12 | 346 | 1 | 340 | 7.59e-62 | 202 |
| MS.gene45224.t1 | AT1G62900 | 45.813 | 203 | 107 | 3 | 166 | 366 | 4 | 205 | 1.64e-57 | 186 |
| MS.gene45224.t1 | AT5G37170 | 35.714 | 322 | 160 | 10 | 56 | 366 | 49 | 334 | 9.62e-55 | 183 |
| MS.gene45224.t1 | AT5G37170 | 43.500 | 200 | 105 | 5 | 172 | 366 | 38 | 234 | 3.28e-51 | 171 |
| MS.gene45224.t1 | AT1G33030 | 36.576 | 257 | 154 | 6 | 20 | 271 | 3 | 255 | 3.48e-49 | 167 |
| MS.gene45224.t1 | AT1G33030 | 36.614 | 254 | 152 | 6 | 20 | 268 | 3 | 252 | 4.66e-48 | 164 |
| MS.gene45224.t1 | AT5G37170 | 43.386 | 189 | 99 | 5 | 183 | 366 | 1 | 186 | 5.08e-48 | 161 |
| MS.gene45224.t1 | AT1G21130 | 40.824 | 267 | 141 | 8 | 14 | 268 | 13 | 274 | 3.26e-44 | 154 |
| MS.gene45224.t1 | AT1G63140 | 38.697 | 261 | 144 | 7 | 20 | 268 | 46 | 302 | 2.15e-43 | 152 |
| MS.gene45224.t1 | AT4G35150 | 34.951 | 206 | 124 | 3 | 156 | 351 | 105 | 310 | 7.86e-39 | 141 |
| MS.gene45224.t1 | AT4G35160 | 31.722 | 331 | 202 | 10 | 38 | 351 | 44 | 367 | 6.67e-38 | 140 |
| MS.gene45224.t1 | AT1G77530 | 37.179 | 234 | 135 | 6 | 24 | 247 | 30 | 261 | 4.00e-34 | 127 |
| MS.gene45224.t1 | AT1G63140 | 37.021 | 235 | 132 | 7 | 20 | 242 | 46 | 276 | 1.31e-32 | 124 |
Find 70 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATATCCATCAATTA+AGG | 0.143550 | 7.3:+85805692 | MS.gene45224:CDS |
| TGCTAAAGAATATGAAATTT+TGG | 0.154985 | 7.3:+85807173 | MS.gene45224:CDS |
| TCATTGATTTGTTGAATATT+TGG | 0.166485 | 7.3:-85805554 | None:intergenic |
| TGTTGTGCTTTCTCCATTAT+TGG | 0.201075 | 7.3:+85807231 | MS.gene45224:CDS |
| GACCTATTCAAGAAAGTTAA+TGG | 0.210657 | 7.3:+85805489 | MS.gene45224:CDS |
| TACAAAGCTTTGCCTCAAAA+TGG | 0.249404 | 7.3:+85807033 | MS.gene45224:CDS |
| CTGGATGCATTTGTTGGTTC+TGG | 0.263376 | 7.3:-85807093 | None:intergenic |
| CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7.3:+85803702 | MS.gene45224:CDS |
| GTATCAACTTTGGTTGATAT+TGG | 0.295454 | 7.3:+85805636 | MS.gene45224:CDS |
| ATGTGTCACCCTGCTTTGAT+AGG | 0.308455 | 7.3:+85803963 | MS.gene45224:CDS |
| TTTGTTGGTTCTGGACATTC+TGG | 0.311438 | 7.3:-85807084 | None:intergenic |
| CATATCCTTTATATATTTCA+AGG | 0.318200 | 7.3:-85805608 | None:intergenic |
| ATCAATAATTGAAGCAAATC+TGG | 0.319009 | 7.3:-85807112 | None:intergenic |
| GTTCACTTTGTCATTGGAAT+AGG | 0.323507 | 7.3:-85803574 | None:intergenic |
| AAATTGATTCCCTTAATTGA+TGG | 0.325335 | 7.3:-85805702 | None:intergenic |
| AATACCAACCTTAAGCATTA+TGG | 0.337540 | 7.3:-85806840 | None:intergenic |
| TTCCATTAACTTTCTTGAAT+AGG | 0.343440 | 7.3:-85805491 | None:intergenic |
| AATTTCCATCACTCCAATAA+TGG | 0.352953 | 7.3:-85807244 | None:intergenic |
| AACATGGTTCACTTTGTCAT+TGG | 0.361884 | 7.3:-85803580 | None:intergenic |
| AACTGCTGGAAACACCAAAT+TGG | 0.362727 | 7.3:-85803661 | None:intergenic |
| TCTAGGCTGTATGTCATAAT+TGG | 0.366231 | 7.3:+85806974 | MS.gene45224:intron |
| CATGGTACTAGGTGCCAATT+TGG | 0.366934 | 7.3:+85803647 | MS.gene45224:CDS |
| AAAATCCTTGAAATATATAA+AGG | 0.371676 | 7.3:+85805603 | MS.gene45224:CDS |
| TAACTAAGTATGAGTACTTT+GGG | 0.380596 | 7.3:+85805514 | MS.gene45224:CDS |
| GCAAAATATCCATCAATTAA+GGG | 0.391669 | 7.3:+85805693 | MS.gene45224:CDS |
| GTCTCATTGTCATCTATTTG+TGG | 0.392413 | 7.3:-85803615 | None:intergenic |
| TATTTATAGGTTGAATTTCA+AGG | 0.403327 | 7.3:+85805443 | MS.gene45224:intron |
| GTTGATATTGGAGGTGGAAA+TGG | 0.403826 | 7.3:+85805648 | MS.gene45224:CDS |
| AACACTCTGATTTGCCGAAT+CGG | 0.420138 | 7.3:+85803772 | MS.gene45224:CDS |
| AACATACGGTCGAGCCGATT+CGG | 0.429332 | 7.3:-85803786 | None:intergenic |
| TTCTTGAATAGGTCAATCTC+TGG | 0.434820 | 7.3:-85805480 | None:intergenic |
| TGAAATATATAAAGGATATG+AGG | 0.436772 | 7.3:+85805611 | MS.gene45224:CDS |
| ACACTCTCTGCCATGGTACT+AGG | 0.442707 | 7.3:+85803636 | MS.gene45224:CDS |
| CTCTTCTGTCTATTTCTACT+CGG | 0.445033 | 7.3:+85803829 | MS.gene45224:CDS |
| TTGAATATTTGGTTTACTTG+TGG | 0.449932 | 7.3:-85805543 | None:intergenic |
| ATAACTAAGTATGAGTACTT+TGG | 0.451042 | 7.3:+85805513 | MS.gene45224:CDS |
| AGGAGATGCCATAATGCTTA+AGG | 0.462667 | 7.3:+85806832 | MS.gene45224:CDS |
| ATTGCAGCATTAAGAACTGC+TGG | 0.480012 | 7.3:-85803675 | None:intergenic |
| CACAATGCTACCATCATCAT+TGG | 0.482440 | 7.3:-85803853 | None:intergenic |
| GAAAATGCATCACCCATTCC+AGG | 0.488403 | 7.3:+85805744 | MS.gene45224:CDS |
| ACTTTGGTTGATATTGGAGG+TGG | 0.490275 | 7.3:+85805642 | MS.gene45224:CDS |
| CATTTAGGGATTGAGCATGT+TGG | 0.508771 | 7.3:+85806782 | MS.gene45224:intron |
| TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7.3:+85803708 | MS.gene45224:CDS |
| TGTGTCACCCTGCTTTGATA+GGG | 0.518341 | 7.3:+85803964 | MS.gene45224:CDS |
| TCAACTTTGGTTGATATTGG+AGG | 0.519640 | 7.3:+85805639 | MS.gene45224:CDS |
| TACCACAACCCTATCAAAGC+AGG | 0.522755 | 7.3:-85803972 | None:intergenic |
| GCAAATCTGGATGCATTTGT+TGG | 0.524259 | 7.3:-85807099 | None:intergenic |
| ACCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7.3:+85803970 | MS.gene45224:CDS |
| CAAATTGGCACCTAGTACCA+TGG | 0.530083 | 7.3:-85803646 | None:intergenic |
| TTTCTCCATTATTGGAGTGA+TGG | 0.540479 | 7.3:+85807239 | MS.gene45224:CDS |
| ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7.3:+85807138 | MS.gene45224:CDS |
| TTGCAAGCAAGCGCAACATA+CGG | 0.544131 | 7.3:-85803800 | None:intergenic |
| GGCAAATCAGAGTGTTGAGT+TGG | 0.551660 | 7.3:-85803765 | None:intergenic |
| AGCATTATGGCATCTCCTTG+TGG | 0.554368 | 7.3:-85806827 | None:intergenic |
| AAATGGAAAGGTGATTCTTG+TGG | 0.554848 | 7.3:+85807050 | MS.gene45224:CDS |
| AATATCATGTTCATTAATGC+TGG | 0.556116 | 7.3:+85807135 | MS.gene45224:CDS |
| GAAATATATAAAGGATATGA+GGG | 0.561483 | 7.3:+85805612 | MS.gene45224:CDS |
| GGCTGTATGTCATAATTGGT+CGG | 0.563483 | 7.3:+85806978 | MS.gene45224:intron |
| ATATGAGGGAGTATCAACTT+TGG | 0.569528 | 7.3:+85805626 | MS.gene45224:CDS |
| TTAGGGATTGAGCATGTTGG+AGG | 0.570708 | 7.3:+85806785 | MS.gene45224:intron |
| TAGCAAAAGTATTTACCAGA+AGG | 0.577256 | 7.3:-85803894 | None:intergenic |
| AATAGTGATCGTGGTTATGT+TGG | 0.579280 | 7.3:+85803924 | MS.gene45224:CDS |
| TCTACTCGGACCAATGATGA+TGG | 0.584557 | 7.3:+85803843 | MS.gene45224:CDS |
| GTGACACATAAATGATGTGA+AGG | 0.592598 | 7.3:-85803949 | None:intergenic |
| AGCTTTGCCTCAAAATGGAA+AGG | 0.607753 | 7.3:+85807038 | MS.gene45224:CDS |
| CAATGAGACACTCTCTGCCA+TGG | 0.626681 | 7.3:+85803629 | MS.gene45224:CDS |
| ACCACAACCCTATCAAAGCA+GGG | 0.658650 | 7.3:-85803971 | None:intergenic |
| GTGGAGTGTGAGTTTCAACA+TGG | 0.690775 | 7.3:-85803596 | None:intergenic |
| TATGATGAAAATAGTGATCG+TGG | 0.700099 | 7.3:+85803915 | MS.gene45224:CDS |
| ATGTTTGAAAGTATTCCACA+AGG | 0.713824 | 7.3:+85806812 | MS.gene45224:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAATTTAACTATTAA+TGG | - | chr7.3:85805359-85805378 | None:intergenic | 10.0% |
| !! | AAGAAAAAAAAAATCAATAT+TGG | - | chr7.3:85805892-85805911 | None:intergenic | 10.0% |
| !! | ATATATATATCTTTATTAGT+GGG | + | chr7.3:85804259-85804278 | MS.gene45224:intron | 10.0% |
| !! | ATGAAATAAATAATTAAACA+AGG | - | chr7.3:85804027-85804046 | None:intergenic | 10.0% |
| !! | ATTCACTTAAAAATTAATTA+AGG | - | chr7.3:85806145-85806164 | None:intergenic | 10.0% |
| !! | TATATATATATCTTTATTAG+TGG | + | chr7.3:85804258-85804277 | MS.gene45224:intron | 10.0% |
| !! | TTAAAAAAAACTATAACAAA+CGG | + | chr7.3:85805234-85805253 | MS.gene45224:intron | 10.0% |
| !!! | ATATTGATTTTTTTTTTCTT+CGG | + | chr7.3:85805892-85805911 | MS.gene45224:intron | 10.0% |
| !!! | TAGTCTTTTTTTTTTTTTTT+TGG | - | chr7.3:85804748-85804767 | None:intergenic | 10.0% |
| !! | AAAATAGACAAATTACATTT+AGG | + | chr7.3:85806767-85806786 | MS.gene45224:intron | 15.0% |
| !! | AAAATCCTTGAAATATATAA+AGG | + | chr7.3:85805603-85805622 | MS.gene45224:CDS | 15.0% |
| !! | AAATAGACAAATTACATTTA+GGG | + | chr7.3:85806768-85806787 | MS.gene45224:intron | 15.0% |
| !! | AATATAAACTTACAATTCAA+TGG | + | chr7.3:85804100-85804119 | MS.gene45224:intron | 15.0% |
| !! | TAAAAAAAACTATAACAAAC+GGG | + | chr7.3:85805235-85805254 | MS.gene45224:intron | 15.0% |
| !! | TAAGAAAATTGAATATTGAA+CGG | + | chr7.3:85806237-85806256 | MS.gene45224:intron | 15.0% |
| !! | TACAATATATTAGTTATCAA+GGG | - | chr7.3:85806455-85806474 | None:intergenic | 15.0% |
| !! | TTAAGTGAATTTGAAAAATT+GGG | + | chr7.3:85806155-85806174 | MS.gene45224:intron | 15.0% |
| !! | TTTAAGTGAATTTGAAAAAT+TGG | + | chr7.3:85806154-85806173 | MS.gene45224:intron | 15.0% |
| !! | TTTATAATATGAATCTGAAA+AGG | + | chr7.3:85806580-85806599 | MS.gene45224:intron | 15.0% |
| !!! | ACTCATATAACTAATTTTAT+TGG | + | chr7.3:85806073-85806092 | MS.gene45224:intron | 15.0% |
| !!! | ATTCAATTTTCTTACTAATA+CGG | - | chr7.3:85806231-85806250 | None:intergenic | 15.0% |
| !!! | GTTTGTTATAGTTTTTTTTA+AGG | - | chr7.3:85805235-85805254 | None:intergenic | 15.0% |
| !!! | TAACTAATTTTATTGGTTTT+TGG | + | chr7.3:85806080-85806099 | MS.gene45224:intron | 15.0% |
| !!! | TATAATGTCTAACTATTTTT+TGG | + | chr7.3:85806287-85806306 | MS.gene45224:intron | 15.0% |
| !!! | TATTGATTTTTTTTTTCTTC+GGG | + | chr7.3:85805893-85805912 | MS.gene45224:intron | 15.0% |
| !!! | TATTTTACTAAAATTAGTGA+GGG | + | chr7.3:85806619-85806638 | MS.gene45224:intron | 15.0% |
| !!! | TATTTTCAATTCATAATCTT+GGG | - | chr7.3:85806753-85806772 | None:intergenic | 15.0% |
| !!! | TCTTTTTTTTTTTTTTTTGG+TGG | - | chr7.3:85804745-85804764 | None:intergenic | 15.0% |
| !!! | TTAATTTGATATCATCTAAA+AGG | + | chr7.3:85805815-85805834 | MS.gene45224:intron | 15.0% |
| !!! | TTATTTTACTAAAATTAGTG+AGG | + | chr7.3:85806618-85806637 | MS.gene45224:intron | 15.0% |
| !! | AATTATCCACAATTATTCAA+AGG | + | chr7.3:85806105-85806124 | MS.gene45224:intron | 20.0% |
| !! | CATATCCTTTATATATTTCA+AGG | - | chr7.3:85805611-85805630 | None:intergenic | 20.0% |
| !! | GAAATATATAAAGGATATGA+GGG | + | chr7.3:85805612-85805631 | MS.gene45224:CDS | 20.0% |
| !! | GTACAATATATTAGTTATCA+AGG | - | chr7.3:85806456-85806475 | None:intergenic | 20.0% |
| !! | TAAACAAGGTAAACAAAATT+AGG | - | chr7.3:85804013-85804032 | None:intergenic | 20.0% |
| !! | TGAAATATATAAAGGATATG+AGG | + | chr7.3:85805611-85805630 | MS.gene45224:CDS | 20.0% |
| !! | TGTTAAAATAATTGTTGAAC+TGG | - | chr7.3:85806728-85806747 | None:intergenic | 20.0% |
| !! | TGTTAGAATGACATATAATT+TGG | - | chr7.3:85806879-85806898 | None:intergenic | 20.0% |
| !! | TTCTACCAAAATTAACTAAT+AGG | + | chr7.3:85805329-85805348 | MS.gene45224:intron | 20.0% |
| !!! | AACAAATCATTTAGTTTGTT+TGG | + | chr7.3:85805046-85805065 | MS.gene45224:intron | 20.0% |
| !!! | CTATTTTCAATTCATAATCT+TGG | - | chr7.3:85806754-85806773 | None:intergenic | 20.0% |
| !!! | GATTTTTTTCATGTGAATTT+TGG | - | chr7.3:85805589-85805608 | None:intergenic | 20.0% |
| !!! | GTGAATATAGCTTTTTTTTA+TGG | + | chr7.3:85804808-85804827 | MS.gene45224:intron | 20.0% |
| !!! | TATTTATAGGTTGAATTTCA+AGG | + | chr7.3:85805443-85805462 | MS.gene45224:intron | 20.0% |
| !!! | TCATTGATTTGTTGAATATT+TGG | - | chr7.3:85805557-85805576 | None:intergenic | 20.0% |
| !!! | TGCTAAAGAATATGAAATTT+TGG | + | chr7.3:85807173-85807192 | MS.gene45224:CDS | 20.0% |
| !!! | TTCAATTTTCTTACTAATAC+GGG | - | chr7.3:85806230-85806249 | None:intergenic | 20.0% |
| !!! | TTCGGGAAATTTTAAAAAAT+AGG | + | chr7.3:85805910-85805929 | MS.gene45224:intron | 20.0% |
| !!! | TTGAAATAACTTGGTTTTAT+GGG | + | chr7.3:85805778-85805797 | MS.gene45224:intron | 20.0% |
| !!! | TTTTAAAAAGCTCTAACAAA+CGG | + | chr7.3:85805165-85805184 | MS.gene45224:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTTGGTGG+CGG | - | chr7.3:85804742-85804761 | None:intergenic | 20.0% |
| ! | AAAAAAAAGCTATATTCACG+AGG | - | chr7.3:85804807-85804826 | None:intergenic | 25.0% |
| ! | AATATCATGTTCATTAATGC+TGG | + | chr7.3:85807135-85807154 | MS.gene45224:CDS | 25.0% |
| ! | AATATGAATCTGAAAAGGAA+AGG | + | chr7.3:85806585-85806604 | MS.gene45224:intron | 25.0% |
| ! | AATCATACGATGAAGAATAA+TGG | - | chr7.3:85804892-85804911 | None:intergenic | 25.0% |
| ! | AATTAATTAAGGTAAGACCT+AGG | - | chr7.3:85806134-85806153 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr7.3:85804702-85804721 | MS.gene45224:intron | 25.0% |
| ! | AGTTTCAAGCACATATAATA+AGG | - | chr7.3:85806510-85806529 | None:intergenic | 25.0% |
| ! | ATAACTAAGTATGAGTACTT+TGG | + | chr7.3:85805513-85805532 | MS.gene45224:CDS | 25.0% |
| ! | ATATGAATCTGAAAAGGAAA+GGG | + | chr7.3:85806586-85806605 | MS.gene45224:intron | 25.0% |
| ! | ATCAATAATTGAAGCAAATC+TGG | - | chr7.3:85807115-85807134 | None:intergenic | 25.0% |
| ! | ATGTACCAAAACTATCTATA+AGG | - | chr7.3:85806190-85806209 | None:intergenic | 25.0% |
| ! | GAATGTCATTCTAATATGTA+TGG | - | chr7.3:85806671-85806690 | None:intergenic | 25.0% |
| ! | GCAAAATATCCATCAATTAA+GGG | + | chr7.3:85805693-85805712 | MS.gene45224:CDS | 25.0% |
| ! | GGTCAAATGTAATATAAGAA+AGG | - | chr7.3:85804862-85804881 | None:intergenic | 25.0% |
| ! | TAACTAAGTATGAGTACTTT+GGG | + | chr7.3:85805514-85805533 | MS.gene45224:CDS | 25.0% |
| ! | TGCAAAATATCCATCAATTA+AGG | + | chr7.3:85805692-85805711 | MS.gene45224:CDS | 25.0% |
| ! | TTCAAATGAGAGAGAAAATA+TGG | - | chr7.3:85805124-85805143 | None:intergenic | 25.0% |
| ! | TTCCATTAACTTTCTTGAAT+AGG | - | chr7.3:85805494-85805513 | None:intergenic | 25.0% |
| !! | AAATTGATTCCCTTAATTGA+TGG | - | chr7.3:85805705-85805724 | None:intergenic | 25.0% |
| !! | ATCTATTTTGTGTTTGTTTG+CGG | + | chr7.3:85805002-85805021 | MS.gene45224:intron | 25.0% |
| !! | CTCTTTTTCTTGAAATAACT+TGG | + | chr7.3:85805769-85805788 | MS.gene45224:intron | 25.0% |
| !! | CTTTACCTTATAGATAGTTT+TGG | + | chr7.3:85806182-85806201 | MS.gene45224:intron | 25.0% |
| !! | GAAAGCCTATTAGTTAATTT+TGG | - | chr7.3:85805337-85805356 | None:intergenic | 25.0% |
| !! | TTGAATATTTGGTTTACTTG+TGG | - | chr7.3:85805546-85805565 | None:intergenic | 25.0% |
| !!! | ACATGTGAGTTTTGTTTTTT+TGG | - | chr7.3:85806386-85806405 | None:intergenic | 25.0% |
| !!! | CTTGAAATAACTTGGTTTTA+TGG | + | chr7.3:85805777-85805796 | MS.gene45224:intron | 25.0% |
| !!! | GTAGAGTAAAATTTAGTTTG+TGG | + | chr7.3:85806033-85806052 | MS.gene45224:intron | 25.0% |
| !!! | TAGTTTGATAACATTTTGCT+TGG | - | chr7.3:85804363-85804382 | None:intergenic | 25.0% |
| !!! | TCCTCTGATTTTATTTTTTC+CGG | - | chr7.3:85804599-85804618 | None:intergenic | 25.0% |
| AAAGTATAGCTATATTCACG+AGG | - | chr7.3:85804836-85804855 | None:intergenic | 30.0% | |
| AAGGTAAACAAAATTAGGCA+AGG | - | chr7.3:85804008-85804027 | None:intergenic | 30.0% | |
| AATACCAACCTTAAGCATTA+TGG | - | chr7.3:85806843-85806862 | None:intergenic | 30.0% | |
| AATTTCCATCACTCCAATAA+TGG | - | chr7.3:85807247-85807266 | None:intergenic | 30.0% | |
| ACCGGAAAAAATAAAATCAG+AGG | + | chr7.3:85804595-85804614 | MS.gene45224:intron | 30.0% | |
| AGGTTACCTTTGAATAATTG+TGG | - | chr7.3:85806114-85806133 | None:intergenic | 30.0% | |
| ATTCTTCATCGTATGATTGA+GGG | + | chr7.3:85804894-85804913 | MS.gene45224:intron | 30.0% | |
| CAATTATTCAAAGGTAACCT+AGG | + | chr7.3:85806114-85806133 | MS.gene45224:intron | 30.0% | |
| CTCAATAAAATAGTGCTTAC+TGG | + | chr7.3:85806925-85806944 | MS.gene45224:intron | 30.0% | |
| GAACTGGTCATTAATACAAA+GGG | - | chr7.3:85806712-85806731 | None:intergenic | 30.0% | |
| GACCTATTCAAGAAAGTTAA+TGG | + | chr7.3:85805489-85805508 | MS.gene45224:CDS | 30.0% | |
| TATGATGAAAATAGTGATCG+TGG | + | chr7.3:85803915-85803934 | MS.gene45224:CDS | 30.0% | |
| TATTCTTCATCGTATGATTG+AGG | + | chr7.3:85804893-85804912 | MS.gene45224:intron | 30.0% | |
| TGAACTGGTCATTAATACAA+AGG | - | chr7.3:85806713-85806732 | None:intergenic | 30.0% | |
| ! | CTCAACTTGTTTGAAATCAT+TGG | + | chr7.3:85803702-85803721 | MS.gene45224:CDS | 30.0% |
| ! | GTATCAACTTTGGTTGATAT+TGG | + | chr7.3:85805636-85805655 | MS.gene45224:CDS | 30.0% |
| ! | TTGTTTGAAATCATTGGTGA+TGG | + | chr7.3:85803708-85803727 | MS.gene45224:CDS | 30.0% |
| !! | ATGAAGAATAATGGATGAGA+GGG | - | chr7.3:85804883-85804902 | None:intergenic | 30.0% |
| !! | ATGTTTGAAAGTATTCCACA+AGG | + | chr7.3:85806812-85806831 | MS.gene45224:CDS | 30.0% |
| !! | ATTTCAAGAAAAAGAGTACC+TGG | - | chr7.3:85805765-85805784 | None:intergenic | 30.0% |
| !! | TAGCAAAAGTATTTACCAGA+AGG | - | chr7.3:85803897-85803916 | None:intergenic | 30.0% |
| !!! | AAATAACTTGGTTTTATGGG+AGG | + | chr7.3:85805781-85805800 | MS.gene45224:intron | 30.0% |
| !!! | ATTTTTTCCGGTGTCAATTT+CGG | - | chr7.3:85804587-85804606 | None:intergenic | 30.0% |
| AAATGGAAAGGTGATTCTTG+TGG | + | chr7.3:85807050-85807069 | MS.gene45224:CDS | 35.0% | |
| AACATGGTTCACTTTGTCAT+TGG | - | chr7.3:85803583-85803602 | None:intergenic | 35.0% | |
| AATAGTGATCGTGGTTATGT+TGG | + | chr7.3:85803924-85803943 | MS.gene45224:CDS | 35.0% | |
| AGAGTTCTTTGATATCCTAG+AGG | - | chr7.3:85806487-85806506 | None:intergenic | 35.0% | |
| ATCATGTTCATTAATGCTGG+TGG | + | chr7.3:85807138-85807157 | MS.gene45224:CDS | 35.0% | |
| GAGTTCTTTGATATCCTAGA+GGG | - | chr7.3:85806486-85806505 | None:intergenic | 35.0% | |
| GGATAATGCATAATACATGC+AGG | - | chr7.3:85804431-85804450 | None:intergenic | 35.0% | |
| GTCTCATTGTCATCTATTTG+TGG | - | chr7.3:85803618-85803637 | None:intergenic | 35.0% | |
| GTGACACATAAATGATGTGA+AGG | - | chr7.3:85803952-85803971 | None:intergenic | 35.0% | |
| GTTCACTTTGTCATTGGAAT+AGG | - | chr7.3:85803577-85803596 | None:intergenic | 35.0% | |
| TACAAAGCTTTGCCTCAAAA+TGG | + | chr7.3:85807033-85807052 | MS.gene45224:CDS | 35.0% | |
| TATCCCTATTTCGTTGTTCT+AGG | + | chr7.3:85806957-85806976 | MS.gene45224:intron | 35.0% | |
| TCTAGGCTGTATGTCATAAT+TGG | + | chr7.3:85806974-85806993 | MS.gene45224:intron | 35.0% | |
| TGACGATTCCCGAATATTTA+GGG | + | chr7.3:85806427-85806446 | MS.gene45224:intron | 35.0% | |
| TGATATCCTAGAGGGAAAAT+GGG | - | chr7.3:85806478-85806497 | None:intergenic | 35.0% | |
| TGTTGTGCTTTCTCCATTAT+TGG | + | chr7.3:85807231-85807250 | MS.gene45224:CDS | 35.0% | |
| TTCTTCATCGTATGATTGAG+GGG | + | chr7.3:85804895-85804914 | MS.gene45224:intron | 35.0% | |
| TTCTTGAATAGGTCAATCTC+TGG | - | chr7.3:85805483-85805502 | None:intergenic | 35.0% | |
| TTGATATCCTAGAGGGAAAA+TGG | - | chr7.3:85806479-85806498 | None:intergenic | 35.0% | |
| TTTCTCCATTATTGGAGTGA+TGG | + | chr7.3:85807239-85807258 | MS.gene45224:CDS | 35.0% | |
| ! | AGAATCACCTTTCCATTTTG+AGG | - | chr7.3:85807048-85807067 | None:intergenic | 35.0% |
| ! | CATTTTCAATCACTTGAGGA+AGG | - | chr7.3:85805731-85805750 | None:intergenic | 35.0% |
| ! | GATGCATTTTCAATCACTTG+AGG | - | chr7.3:85805735-85805754 | None:intergenic | 35.0% |
| ! | TCAACTTTGGTTGATATTGG+AGG | + | chr7.3:85805639-85805658 | MS.gene45224:CDS | 35.0% |
| !! | AAGAAAAAGAGTACCTGGAA+TGG | - | chr7.3:85805760-85805779 | None:intergenic | 35.0% |
| !! | AGAAAAAGAGTACCTGGAAT+GGG | - | chr7.3:85805759-85805778 | None:intergenic | 35.0% |
| !! | ATATGAGGGAGTATCAACTT+TGG | + | chr7.3:85805626-85805645 | MS.gene45224:CDS | 35.0% |
| !! | CTCTTCTGTCTATTTCTACT+CGG | + | chr7.3:85803829-85803848 | MS.gene45224:CDS | 35.0% |
| !! | GATGAAGAATAATGGATGAG+AGG | - | chr7.3:85804884-85804903 | None:intergenic | 35.0% |
| !!! | GAAATTTTGGCTCAACAATC+TGG | + | chr7.3:85807186-85807205 | MS.gene45224:CDS | 35.0% |
| !!! | TACCTTTGAAGCTTCTTTTG+TGG | + | chr7.3:85806644-85806663 | MS.gene45224:intron | 35.0% |
| !!! | TTTTTTTTTTGGTGGCGGTT+GGG | - | chr7.3:85804737-85804756 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTTGGTGGCGGT+TGG | - | chr7.3:85804738-85804757 | None:intergenic | 35.0% |
| AACTGCTGGAAACACCAAAT+TGG | - | chr7.3:85803664-85803683 | None:intergenic | 40.0% | |
| ACAGCCTAGAACAACGAAAT+AGG | - | chr7.3:85806964-85806983 | None:intergenic | 40.0% | |
| AGCTTTGCCTCAAAATGGAA+AGG | + | chr7.3:85807038-85807057 | MS.gene45224:CDS | 40.0% | |
| AGGAGATGCCATAATGCTTA+AGG | + | chr7.3:85806832-85806851 | MS.gene45224:CDS | 40.0% | |
| ATCAAGTGAGCTAAGCTCAT+GGG | + | chr7.3:85804454-85804473 | MS.gene45224:intron | 40.0% | |
| ATTAGTGGGAAATGTGTTGC+AGG | + | chr7.3:85804273-85804292 | MS.gene45224:intron | 40.0% | |
| ATTGCAGCATTAAGAACTGC+TGG | - | chr7.3:85803678-85803697 | None:intergenic | 40.0% | |
| CACAATGCTACCATCATCAT+TGG | - | chr7.3:85803856-85803875 | None:intergenic | 40.0% | |
| CAGCCTAGAACAACGAAATA+GGG | - | chr7.3:85806963-85806982 | None:intergenic | 40.0% | |
| CATTTAGGGATTGAGCATGT+TGG | + | chr7.3:85806782-85806801 | MS.gene45224:intron | 40.0% | |
| GACCACAAAAGAAGCTTCAA+AGG | - | chr7.3:85806649-85806668 | None:intergenic | 40.0% | |
| GAGCTTAGCTCACTTGATAA+AGG | - | chr7.3:85804452-85804471 | None:intergenic | 40.0% | |
| GATGCCATAATGCTTAAGGT+TGG | + | chr7.3:85806836-85806855 | MS.gene45224:intron | 40.0% | |
| GCAAATCTGGATGCATTTGT+TGG | - | chr7.3:85807102-85807121 | None:intergenic | 40.0% | |
| GGCTGTATGTCATAATTGGT+CGG | + | chr7.3:85806978-85806997 | MS.gene45224:intron | 40.0% | |
| GTGACGATTCCCGAATATTT+AGG | + | chr7.3:85806426-85806445 | MS.gene45224:intron | 40.0% | |
| GTTGATATTGGAGGTGGAAA+TGG | + | chr7.3:85805648-85805667 | MS.gene45224:CDS | 40.0% | |
| TAACACACCGAAATTGACAC+CGG | + | chr7.3:85804577-85804596 | MS.gene45224:intron | 40.0% | |
| TATCAAGTGAGCTAAGCTCA+TGG | + | chr7.3:85804453-85804472 | MS.gene45224:intron | 40.0% | |
| TCAAGGGAGCCCTAAATATT+CGG | - | chr7.3:85806439-85806458 | None:intergenic | 40.0% | |
| TGCATAATACATGCAGGAGT+CGG | - | chr7.3:85804425-85804444 | None:intergenic | 40.0% | |
| ! | AACACTCTGATTTGCCGAAT+CGG | + | chr7.3:85803772-85803791 | MS.gene45224:CDS | 40.0% |
| ! | ACTTTGGTTGATATTGGAGG+TGG | + | chr7.3:85805642-85805661 | MS.gene45224:CDS | 40.0% |
| ! | ATTGTACCCATTTTCCCTCT+AGG | + | chr7.3:85806469-85806488 | MS.gene45224:intron | 40.0% |
| !! | TTTGTTGGTTCTGGACATTC+TGG | - | chr7.3:85807087-85807106 | None:intergenic | 40.0% |
| ACCACAACCCTATCAAAGCA+GGG | - | chr7.3:85803974-85803993 | None:intergenic | 45.0% | |
| ACTAGTGAGCTTAGCTCAGT+TGG | + | chr7.3:85804665-85804684 | MS.gene45224:intron | 45.0% | |
| AGCATTATGGCATCTCCTTG+TGG | - | chr7.3:85806830-85806849 | None:intergenic | 45.0% | |
| ATGTGTCACCCTGCTTTGAT+AGG | + | chr7.3:85803963-85803982 | MS.gene45224:CDS | 45.0% | |
| CAAATTGGCACCTAGTACCA+TGG | - | chr7.3:85803649-85803668 | None:intergenic | 45.0% | |
| CAAGGGAGCCCTAAATATTC+GGG | - | chr7.3:85806438-85806457 | None:intergenic | 45.0% | |
| CATGGTACTAGGTGCCAATT+TGG | + | chr7.3:85803647-85803666 | MS.gene45224:CDS | 45.0% | |
| GAAAATGCATCACCCATTCC+AGG | + | chr7.3:85805744-85805763 | MS.gene45224:CDS | 45.0% | |
| GCATAATACATGCAGGAGTC+GGG | - | chr7.3:85804424-85804443 | None:intergenic | 45.0% | |
| GTGGAGTGTGAGTTTCAACA+TGG | - | chr7.3:85803599-85803618 | None:intergenic | 45.0% | |
| TACCACAACCCTATCAAAGC+AGG | - | chr7.3:85803975-85803994 | None:intergenic | 45.0% | |
| TCTACTCGGACCAATGATGA+TGG | + | chr7.3:85803843-85803862 | MS.gene45224:CDS | 45.0% | |
| TGTGTCACCCTGCTTTGATA+GGG | + | chr7.3:85803964-85803983 | MS.gene45224:CDS | 45.0% | |
| TTAGGGATTGAGCATGTTGG+AGG | + | chr7.3:85806785-85806804 | MS.gene45224:intron | 45.0% | |
| TTGCAAGCAAGCGCAACATA+CGG | - | chr7.3:85803803-85803822 | None:intergenic | 45.0% | |
| ! | GATTGAGGGGTCGTTTGTTA+CGG | + | chr7.3:85804908-85804927 | MS.gene45224:intron | 45.0% |
| ! | GTTTTTGCGATCACACCTTC+TGG | + | chr7.3:85803879-85803898 | MS.gene45224:CDS | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr7.3:85804670-85804689 | MS.gene45224:intron | 45.0% |
| !! | CTGGATGCATTTGTTGGTTC+TGG | - | chr7.3:85807096-85807115 | None:intergenic | 45.0% |
| !! | GGCAAATCAGAGTGTTGAGT+TGG | - | chr7.3:85803768-85803787 | None:intergenic | 45.0% |
| !!! | ATAAAAATTAAATTAATTTG+TGG | - | chr7.3:85805962-85805981 | None:intergenic | 5.0% |
| !!! | CATTTTTATAATATATTTAT+AGG | + | chr7.3:85805430-85805449 | MS.gene45224:intron | 5.0% |
| AACATACGGTCGAGCCGATT+CGG | - | chr7.3:85803789-85803808 | None:intergenic | 50.0% | |
| ACACTCTCTGCCATGGTACT+AGG | + | chr7.3:85803636-85803655 | MS.gene45224:CDS | 50.0% | |
| ACCCTGCTTTGATAGGGTTG+TGG | + | chr7.3:85803970-85803989 | MS.gene45224:CDS | 50.0% | |
| CAATGAGACACTCTCTGCCA+TGG | + | chr7.3:85803629-85803648 | MS.gene45224:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 85803567 | 85807275 | 85803567 | ID=MS.gene45224 |
| chr7.3 | mRNA | 85803567 | 85807275 | 85803567 | ID=MS.gene45224.t1;Parent=MS.gene45224 |
| chr7.3 | exon | 85803567 | 85803991 | 85803567 | ID=MS.gene45224.t1.exon1;Parent=MS.gene45224.t1 |
| chr7.3 | CDS | 85803567 | 85803991 | 85803567 | ID=cds.MS.gene45224.t1;Parent=MS.gene45224.t1 |
| chr7.3 | exon | 85805452 | 85805765 | 85805452 | ID=MS.gene45224.t1.exon2;Parent=MS.gene45224.t1 |
| chr7.3 | CDS | 85805452 | 85805765 | 85805452 | ID=cds.MS.gene45224.t1;Parent=MS.gene45224.t1 |
| chr7.3 | exon | 85806789 | 85806853 | 85806789 | ID=MS.gene45224.t1.exon3;Parent=MS.gene45224.t1 |
| chr7.3 | CDS | 85806789 | 85806853 | 85806789 | ID=cds.MS.gene45224.t1;Parent=MS.gene45224.t1 |
| chr7.3 | exon | 85806979 | 85807275 | 85806979 | ID=MS.gene45224.t1.exon4;Parent=MS.gene45224.t1 |
| chr7.3 | CDS | 85806979 | 85807275 | 85806979 | ID=cds.MS.gene45224.t1;Parent=MS.gene45224.t1 |
| Gene Sequence |
| Protein sequence |
