Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50875.t1 | RHN66028.1 | 77.2 | 491 | 66 | 9 | 1 | 468 | 27 | 494 | 8.70E-144 | 520.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50875.t1 | Q9M202 | 39.7 | 78 | 45 | 1 | 302 | 379 | 124 | 199 | 7.3e-06 | 53.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50875.t1 | A0A072UTD3 | 77.2 | 491 | 66 | 9 | 1 | 468 | 1 | 468 | 6.3e-144 | 520.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene50875.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene50875 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene50875 | 0.812375 | 4.38E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene50875 | 0.834281 | 3.28E-56 | -1.69E-46 |
| MS.gene050029 | MS.gene50875 | 0.803662 | 3.13E-49 | -1.69E-46 |
| MS.gene050043 | MS.gene50875 | 0.810014 | 1.42E-50 | -1.69E-46 |
| MS.gene050221 | MS.gene50875 | 0.801631 | 8.22E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene50875 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene051594 | MS.gene50875 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene50875 | 0.807667 | 4.52E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene50875 | 0.816315 | 5.89E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene50875 | 0.813054 | 3.11E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene50875 | 0.807593 | 4.69E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene50875 | 0.816261 | 6.06E-52 | -1.69E-46 |
| MS.gene05365 | MS.gene50875 | 0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene50875 | 0.801075 | 1.07E-48 | -1.69E-46 |
| MS.gene05422 | MS.gene50875 | 0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene50875 | 0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene50875 | -0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene50875 | 0.816357 | 5.76E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene50875 | 0.808779 | 2.62E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene50875 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene05531 | MS.gene50875 | 0.826921 | 2.08E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene50875 | 0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene055589 | MS.gene50875 | 0.801403 | 9.15E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene50875 | 0.802635 | 5.11E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene50875 | 0.805027 | 1.63E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene50875 | 0.801987 | 6.95E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene50875 | 0.809472 | 1.86E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene50875 | 0.816628 | 5.01E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene50875 | 0.820234 | 7.64E-53 | -1.69E-46 |
| MS.gene05925 | MS.gene50875 | 0.814342 | 1.62E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene50875 | 0.81967 | 1.03E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene50875 | 0.828702 | 7.76E-55 | -1.69E-46 |
| MS.gene059460 | MS.gene50875 | 0.82839 | 9.23E-55 | -1.69E-46 |
| MS.gene059584 | MS.gene50875 | 0.817341 | 3.47E-52 | -1.69E-46 |
| MS.gene059605 | MS.gene50875 | 0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene50875 | 0.816759 | 4.69E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene50875 | 0.83299 | 6.89E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50875.t1 | MTR_3g023760 | 80.652 | 491 | 49 | 10 | 1 | 468 | 1 | 468 | 0.0 | 684 |
| MS.gene50875.t1 | MTR_4g109340 | 40.741 | 432 | 188 | 20 | 1 | 402 | 1 | 394 | 8.46e-69 | 228 |
| MS.gene50875.t1 | MTR_4g109340 | 37.705 | 122 | 46 | 3 | 343 | 464 | 425 | 516 | 5.90e-16 | 80.5 |
| MS.gene50875.t1 | MTR_5g043930 | 33.065 | 248 | 119 | 7 | 7 | 220 | 1 | 235 | 7.15e-24 | 104 |
| MS.gene50875.t1 | MTR_4g082980 | 38.583 | 127 | 69 | 2 | 1 | 120 | 1 | 125 | 1.63e-15 | 79.0 |
| MS.gene50875.t1 | MTR_4g028610 | 24.033 | 491 | 246 | 20 | 5 | 463 | 8 | 403 | 5.23e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50875.t1 | AT1G26610 | 40.611 | 229 | 106 | 11 | 1 | 220 | 1 | 208 | 3.39e-30 | 122 |
| MS.gene50875.t1 | AT1G26590 | 28.444 | 225 | 109 | 7 | 1 | 220 | 1 | 178 | 1.45e-14 | 75.5 |
| MS.gene50875.t1 | AT1G26590 | 28.444 | 225 | 109 | 7 | 1 | 220 | 1 | 178 | 1.45e-14 | 75.5 |
| MS.gene50875.t1 | AT1G26590 | 28.444 | 225 | 109 | 7 | 1 | 220 | 1 | 178 | 1.45e-14 | 75.5 |
| MS.gene50875.t1 | AT1G26590 | 28.444 | 225 | 109 | 7 | 1 | 220 | 19 | 196 | 2.14e-14 | 75.1 |
Find 67 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTTCTGTTGTGAATTT+TGG | 0.147535 | 3.1:-14251143 | MS.gene50875:CDS |
| AAACCAAAGAAGTTGGATTT+TGG | 0.184575 | 3.1:-14250867 | MS.gene50875:CDS |
| CCTTGTTCTTAACTTTCTTT+TGG | 0.193235 | 3.1:+14251184 | None:intergenic |
| TTAGAAACTAAATGAGTTAA+TGG | 0.244636 | 3.1:+14250945 | None:intergenic |
| TTGGATCTTCTCTTTCTCTT+TGG | 0.274333 | 3.1:+14251203 | None:intergenic |
| TCACCAAAATCCAACTTCTT+TGG | 0.280627 | 3.1:+14250864 | None:intergenic |
| AATGATCAAAGCAGTGAAAA+TGG | 0.281007 | 3.1:-14250477 | MS.gene50875:CDS |
| TTTCCTTCTGGTAGATCATT+AGG | 0.296213 | 3.1:-14251578 | MS.gene50875:CDS |
| TAATAATGATGATGATTCTT+TGG | 0.335313 | 3.1:-14250979 | MS.gene50875:CDS |
| AGAGTTTCTGTTATTGAGAA+TGG | 0.358170 | 3.1:-14250786 | MS.gene50875:CDS |
| TGATGATGATTCTTTGGAAT+TGG | 0.360523 | 3.1:-14250973 | MS.gene50875:CDS |
| AATGGATGAGAAGAAGAAAA+TGG | 0.363640 | 3.1:-14250763 | MS.gene50875:CDS |
| CATTTAGTTTCTAAGATTGA+TGG | 0.365876 | 3.1:-14250936 | MS.gene50875:CDS |
| TTTCAATCTTATCAAGCTCT+TGG | 0.373280 | 3.1:-14250549 | MS.gene50875:CDS |
| CAATCTGTGAAAGCTTTGTT+TGG | 0.387025 | 3.1:-14251311 | MS.gene50875:CDS |
| AAATGGAAACAGTACTGAAT+TGG | 0.402383 | 3.1:-14250460 | MS.gene50875:CDS |
| ACAAAATCAGGTACTACTAA+TGG | 0.417832 | 3.1:-14250696 | MS.gene50875:CDS |
| TGTGTAAAGAATGTGGTAAA+GGG | 0.417853 | 3.1:-14251337 | MS.gene50875:CDS |
| ACTTCCTTCTTCTTCCAACT+TGG | 0.433264 | 3.1:+14250833 | None:intergenic |
| ATGAAGAAGAAAGAAGGTTA+TGG | 0.434835 | 3.1:-14251455 | MS.gene50875:CDS |
| TTCTGATAATAATGATGAAA+AGG | 0.437329 | 3.1:-14251090 | MS.gene50875:CDS |
| TTACATCAGAAGGTGAATTC+AGG | 0.437398 | 3.1:-14250626 | MS.gene50875:CDS |
| TGATTCTGATTTAGCATTTG+AGG | 0.447267 | 3.1:-14250730 | MS.gene50875:CDS |
| TTGTGTAAAGAATGTGGTAA+AGG | 0.465384 | 3.1:-14251338 | MS.gene50875:CDS |
| GTCAATGTAAGAACAAAATC+AGG | 0.466460 | 3.1:-14250708 | MS.gene50875:CDS |
| TTATCCAAAACAACATCAAA+AGG | 0.478081 | 3.1:+14251362 | None:intergenic |
| TACAAACCATGGTGGTTAGT+TGG | 0.485401 | 3.1:-14250294 | MS.gene50875:CDS |
| CAATCTTATCAAGCTCTTGG+AGG | 0.491208 | 3.1:-14250546 | MS.gene50875:CDS |
| GTGAAAGAGTTGCTGAAATG+AGG | 0.492259 | 3.1:-14250389 | MS.gene50875:CDS |
| GTCATAGAGCTAGTCATAAG+AGG | 0.492989 | 3.1:-14250524 | MS.gene50875:CDS |
| AGAAGAATGAAGAAGAAAGA+AGG | 0.493856 | 3.1:-14251461 | MS.gene50875:CDS |
| TACTAATGGTACTTCAATGA+AGG | 0.501936 | 3.1:-14250682 | MS.gene50875:CDS |
| GAAGAAGAAAATGGAGATTG+AGG | 0.502348 | 3.1:-14250754 | MS.gene50875:CDS |
| TTGGAAGAAGAAGGAAGTGA+TGG | 0.508641 | 3.1:-14250828 | MS.gene50875:CDS |
| TCATCATCAATACTTGCAGC+AGG | 0.511776 | 3.1:+14250339 | None:intergenic |
| ATTTAGTTTCTAAGATTGAT+GGG | 0.512601 | 3.1:-14250935 | MS.gene50875:CDS |
| TGAAAGAGTTGCTGAAATGA+GGG | 0.515667 | 3.1:-14250388 | MS.gene50875:CDS |
| AAGTCCAAGTTGGAAGAAGA+AGG | 0.518126 | 3.1:-14250837 | MS.gene50875:CDS |
| AGTATTGATGATGAAAGAAA+TGG | 0.523984 | 3.1:-14250330 | MS.gene50875:CDS |
| GCTAGTCATAAGAGGACCAA+GGG | 0.524564 | 3.1:-14250516 | MS.gene50875:CDS |
| AGAGATGTAAGACCTTGGTT+TGG | 0.525051 | 3.1:-14251029 | MS.gene50875:CDS |
| AAGAGAAAATATCAGAAAAG+AGG | 0.527607 | 3.1:-14250603 | MS.gene50875:CDS |
| TTCTGTTATTGAGAATGGAA+TGG | 0.538325 | 3.1:-14250781 | MS.gene50875:CDS |
| TGTAAATGCTGAGGGAAGAA+TGG | 0.552087 | 3.1:-14250418 | MS.gene50875:CDS |
| TACTGAATTGGAAGTAGATG+TGG | 0.557897 | 3.1:-14250448 | MS.gene50875:CDS |
| ATCAAGCAAGAGGCAATGAT+AGG | 0.560531 | 3.1:-14250264 | MS.gene50875:CDS |
| CCTTCTGGTAGATCATTAGG+TGG | 0.567747 | 3.1:-14251575 | MS.gene50875:CDS |
| GATAAATTGTGTAAAGAATG+TGG | 0.571592 | 3.1:-14251344 | MS.gene50875:CDS |
| TGATGAAAAGGAACAAGAAG+AGG | 0.575044 | 3.1:-14251078 | MS.gene50875:CDS |
| TCTTGAAGCAGAAAACCCCT+TGG | 0.580349 | 3.1:+14250500 | None:intergenic |
| AAGGTTACACTTACATCAGA+AGG | 0.589040 | 3.1:-14250636 | MS.gene50875:CDS |
| GATTATGATCATGATGATGA+TGG | 0.591943 | 3.1:-14251509 | MS.gene50875:CDS |
| TTAGTAGAGATGTAAGACCT+TGG | 0.592699 | 3.1:-14251034 | MS.gene50875:CDS |
| GAGAGAATCCAAAGAAAACA+TGG | 0.594959 | 3.1:-14251427 | MS.gene50875:CDS |
| TGGTGATGTTAAGTCCAAGT+TGG | 0.597669 | 3.1:-14250847 | MS.gene50875:CDS |
| TGGAAGCAGTATCAAGCAAG+AGG | 0.613537 | 3.1:-14250274 | MS.gene50875:CDS |
| GATCATTAGGTGGTCACATG+AGG | 0.626071 | 3.1:-14251565 | MS.gene50875:CDS |
| ATGCTGAGATTTACAAACCA+TGG | 0.628225 | 3.1:-14250305 | MS.gene50875:CDS |
| CCAAAAGAAAGTTAAGAACA+AGG | 0.628452 | 3.1:-14251184 | MS.gene50875:CDS |
| AGCTAGTCATAAGAGGACCA+AGG | 0.642709 | 3.1:-14250517 | MS.gene50875:CDS |
| CCACCTAATGATCTACCAGA+AGG | 0.655089 | 3.1:+14251575 | None:intergenic |
| GGAGATGAATGTAAATGCTG+AGG | 0.667074 | 3.1:-14250427 | MS.gene50875:CDS |
| GAGATGAATGTAAATGCTGA+GGG | 0.668731 | 3.1:-14250426 | MS.gene50875:CDS |
| CTGCTTCCAACTAACCACCA+TGG | 0.679286 | 3.1:+14250288 | None:intergenic |
| CTGAGATTTACAAACCATGG+TGG | 0.688746 | 3.1:-14250302 | MS.gene50875:CDS |
| CTAGTCATAAGAGGACCAAG+GGG | 0.693462 | 3.1:-14250515 | MS.gene50875:CDS |
| ATAGAATTGATACCAAACCA+AGG | 0.704170 | 3.1:+14251017 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGAAACTAAATGAGTTAA+TGG | + | chr3.1:14250938-14250957 | None:intergenic | 20.0% |
| !! | TTCTGATAATAATGATGAAA+AGG | - | chr3.1:14250790-14250809 | MS.gene50875:CDS | 20.0% |
| !!! | ATTTAGTTTCTAAGATTGAT+GGG | - | chr3.1:14250945-14250964 | MS.gene50875:CDS | 20.0% |
| !!! | TAATAATGATGATGATTCTT+TGG | - | chr3.1:14250901-14250920 | MS.gene50875:CDS | 20.0% |
| ! | AAGAGAAAATATCAGAAAAG+AGG | - | chr3.1:14251277-14251296 | MS.gene50875:CDS | 25.0% |
| ! | GATAAATTGTGTAAAGAATG+TGG | - | chr3.1:14250536-14250555 | MS.gene50875:CDS | 25.0% |
| ! | TTATCCAAAACAACATCAAA+AGG | + | chr3.1:14250521-14250540 | None:intergenic | 25.0% |
| !!! | AGTATTGATGATGAAAGAAA+TGG | - | chr3.1:14251550-14251569 | MS.gene50875:CDS | 25.0% |
| !!! | CATTTAGTTTCTAAGATTGA+TGG | - | chr3.1:14250944-14250963 | MS.gene50875:CDS | 25.0% |
| !!! | GAAGAATAAGAGTTTTGAAT+TGG | - | chr3.1:14250610-14250629 | MS.gene50875:CDS | 25.0% |
| !!! | TTTTGTTGATTCTGAAACTA+AGG | - | chr3.1:14251225-14251244 | MS.gene50875:CDS | 25.0% |
| AATGATCAAAGCAGTGAAAA+TGG | - | chr3.1:14251403-14251422 | MS.gene50875:CDS | 30.0% | |
| AATGGATGAGAAGAAGAAAA+TGG | - | chr3.1:14251117-14251136 | MS.gene50875:CDS | 30.0% | |
| ACAAAATCAGGTACTACTAA+TGG | - | chr3.1:14251184-14251203 | MS.gene50875:CDS | 30.0% | |
| AGAAGAATGAAGAAGAAAGA+AGG | - | chr3.1:14250419-14250438 | MS.gene50875:CDS | 30.0% | |
| AGAGTTTCTGTTATTGAGAA+TGG | - | chr3.1:14251094-14251113 | MS.gene50875:CDS | 30.0% | |
| ATAGAATTGATACCAAACCA+AGG | + | chr3.1:14250866-14250885 | None:intergenic | 30.0% | |
| ATGAAGAAGAAAGAAGGTTA+TGG | - | chr3.1:14250425-14250444 | MS.gene50875:CDS | 30.0% | |
| CCAAAAGAAAGTTAAGAACA+AGG | - | chr3.1:14250696-14250715 | MS.gene50875:CDS | 30.0% | |
| GAACAAAAAACCAAAGAAGT+TGG | - | chr3.1:14251006-14251025 | MS.gene50875:CDS | 30.0% | |
| GTCAATGTAAGAACAAAATC+AGG | - | chr3.1:14251172-14251191 | MS.gene50875:CDS | 30.0% | |
| TACTAATGGTACTTCAATGA+AGG | - | chr3.1:14251198-14251217 | MS.gene50875:CDS | 30.0% | |
| TGATTCTGATTTAGCATTTG+AGG | - | chr3.1:14251150-14251169 | MS.gene50875:CDS | 30.0% | |
| TGTGTAAAGAATGTGGTAAA+GGG | - | chr3.1:14250543-14250562 | MS.gene50875:CDS | 30.0% | |
| TTCTGTTATTGAGAATGGAA+TGG | - | chr3.1:14251099-14251118 | MS.gene50875:CDS | 30.0% | |
| TTGTGTAAAGAATGTGGTAA+AGG | - | chr3.1:14250542-14250561 | MS.gene50875:CDS | 30.0% | |
| TTTCAATCTTATCAAGCTCT+TGG | - | chr3.1:14251331-14251350 | MS.gene50875:CDS | 30.0% | |
| ! | AAACCAAAGAAGTTGGATTT+TGG | - | chr3.1:14251013-14251032 | MS.gene50875:CDS | 30.0% |
| ! | AAATGGAAACAGTACTGAAT+TGG | - | chr3.1:14251420-14251439 | MS.gene50875:CDS | 30.0% |
| ! | ACTTCTTCTGTTGTGAATTT+TGG | - | chr3.1:14250737-14250756 | MS.gene50875:CDS | 30.0% |
| ! | CCTTGTTCTTAACTTTCTTT+TGG | + | chr3.1:14250699-14250718 | None:intergenic | 30.0% |
| ! | GATTATGATCATGATGATGA+TGG | - | chr3.1:14250371-14250390 | MS.gene50875:CDS | 30.0% |
| !! | AGATCCTTTTGATGTTGTTT+TGG | - | chr3.1:14250514-14250533 | MS.gene50875:CDS | 30.0% |
| !! | TGATGATGATTCTTTGGAAT+TGG | - | chr3.1:14250907-14250926 | MS.gene50875:CDS | 30.0% |
| AAGGTTACACTTACATCAGA+AGG | - | chr3.1:14251244-14251263 | MS.gene50875:CDS | 35.0% | |
| ATGCTGAGATTTACAAACCA+TGG | - | chr3.1:14251575-14251594 | MS.gene50875:CDS | 35.0% | |
| GAAGAAGAAAATGGAGATTG+AGG | - | chr3.1:14251126-14251145 | MS.gene50875:CDS | 35.0% | |
| GAGAGAATCCAAAGAAAACA+TGG | - | chr3.1:14250453-14250472 | MS.gene50875:CDS | 35.0% | |
| GAGATGAATGTAAATGCTGA+GGG | - | chr3.1:14251454-14251473 | MS.gene50875:CDS | 35.0% | |
| TACTGAATTGGAAGTAGATG+TGG | - | chr3.1:14251432-14251451 | MS.gene50875:CDS | 35.0% | |
| TCACCAAAATCCAACTTCTT+TGG | + | chr3.1:14251019-14251038 | None:intergenic | 35.0% | |
| TGAAAGAGTTGCTGAAATGA+GGG | - | chr3.1:14251492-14251511 | MS.gene50875:CDS | 35.0% | |
| TGATGAAAAGGAACAAGAAG+AGG | - | chr3.1:14250802-14250821 | MS.gene50875:CDS | 35.0% | |
| TTACATCAGAAGGTGAATTC+AGG | - | chr3.1:14251254-14251273 | MS.gene50875:CDS | 35.0% | |
| TTAGTAGAGATGTAAGACCT+TGG | - | chr3.1:14250846-14250865 | MS.gene50875:CDS | 35.0% | |
| TTGGATCTTCTCTTTCTCTT+TGG | + | chr3.1:14250680-14250699 | None:intergenic | 35.0% | |
| TTTCCTTCTGGTAGATCATT+AGG | - | chr3.1:14250302-14250321 | MS.gene50875:CDS | 35.0% | |
| ! | AGTACTCTCCATGTTTTCTT+TGG | + | chr3.1:14250464-14250483 | None:intergenic | 35.0% |
| ! | TGCAGAAAGAATTTTCCTTC+TGG | - | chr3.1:14250290-14250309 | MS.gene50875:CDS | 35.0% |
| !! | CAATCTGTGAAAGCTTTGTT+TGG | - | chr3.1:14250569-14250588 | MS.gene50875:CDS | 35.0% |
| ACTTCCTTCTTCTTCCAACT+TGG | + | chr3.1:14251050-14251069 | None:intergenic | 40.0% | |
| AGAGATGTAAGACCTTGGTT+TGG | - | chr3.1:14250851-14250870 | MS.gene50875:CDS | 40.0% | |
| ATCAAGCAAGAGGCAATGAT+AGG | - | chr3.1:14251616-14251635 | MS.gene50875:CDS | 40.0% | |
| CAATCTTATCAAGCTCTTGG+AGG | - | chr3.1:14251334-14251353 | MS.gene50875:CDS | 40.0% | |
| CTGAGATTTACAAACCATGG+TGG | - | chr3.1:14251578-14251597 | MS.gene50875:CDS | 40.0% | |
| GGAGATGAATGTAAATGCTG+AGG | - | chr3.1:14251453-14251472 | MS.gene50875:CDS | 40.0% | |
| GTCATAGAGCTAGTCATAAG+AGG | - | chr3.1:14251356-14251375 | MS.gene50875:CDS | 40.0% | |
| GTGAAAGAGTTGCTGAAATG+AGG | - | chr3.1:14251491-14251510 | MS.gene50875:CDS | 40.0% | |
| TACAAACCATGGTGGTTAGT+TGG | - | chr3.1:14251586-14251605 | MS.gene50875:CDS | 40.0% | |
| TCATCATCAATACTTGCAGC+AGG | + | chr3.1:14251544-14251563 | None:intergenic | 40.0% | |
| TGTAAATGCTGAGGGAAGAA+TGG | - | chr3.1:14251462-14251481 | MS.gene50875:CDS | 40.0% | |
| TTGGAAGAAGAAGGAAGTGA+TGG | - | chr3.1:14251052-14251071 | MS.gene50875:CDS | 40.0% | |
| ! | AAGTCCAAGTTGGAAGAAGA+AGG | - | chr3.1:14251043-14251062 | MS.gene50875:CDS | 40.0% |
| ! | TGGTGATGTTAAGTCCAAGT+TGG | - | chr3.1:14251033-14251052 | MS.gene50875:CDS | 40.0% |
| AGCTAGTCATAAGAGGACCA+AGG | - | chr3.1:14251363-14251382 | MS.gene50875:CDS | 45.0% | |
| CCACCTAATGATCTACCAGA+AGG | + | chr3.1:14250308-14250327 | None:intergenic | 45.0% | |
| CCTTCTGGTAGATCATTAGG+TGG | - | chr3.1:14250305-14250324 | MS.gene50875:CDS | 45.0% | |
| CTAGTCATAAGAGGACCAAG+GGG | - | chr3.1:14251365-14251384 | MS.gene50875:CDS | 45.0% | |
| GATCATTAGGTGGTCACATG+AGG | - | chr3.1:14250315-14250334 | MS.gene50875:CDS | 45.0% | |
| GCTAGTCATAAGAGGACCAA+GGG | - | chr3.1:14251364-14251383 | MS.gene50875:CDS | 45.0% | |
| TCTTGAAGCAGAAAACCCCT+TGG | + | chr3.1:14251383-14251402 | None:intergenic | 45.0% | |
| TGGAAGCAGTATCAAGCAAG+AGG | - | chr3.1:14251606-14251625 | MS.gene50875:CDS | 45.0% | |
| CTGCTTCCAACTAACCACCA+TGG | + | chr3.1:14251595-14251614 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 14250248 | 14251654 | 14250248 | ID=MS.gene50875 |
| chr3.1 | mRNA | 14250248 | 14251654 | 14250248 | ID=MS.gene50875.t1;Parent=MS.gene50875 |
| chr3.1 | exon | 14250248 | 14251654 | 14250248 | ID=MS.gene50875.t1.exon1;Parent=MS.gene50875.t1 |
| chr3.1 | CDS | 14250248 | 14251654 | 14250248 | ID=cds.MS.gene50875.t1;Parent=MS.gene50875.t1 |
| Gene Sequence |
| Protein sequence |
