Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057921.t1 | RHN66028.1 | 82.4 | 478 | 60 | 7 | 1 | 464 | 27 | 494 | 1.60E-153 | 552.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057921.t1 | A0A072UTD3 | 82.4 | 478 | 60 | 7 | 1 | 464 | 1 | 468 | 1.1e-153 | 552.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene057921.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051279 | MS.gene057921 | 0.814016 | 1.91E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene057921 | 0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene052582 | MS.gene057921 | 0.801791 | 7.62E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene057921 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene057921 | 0.817211 | 3.71E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene057921 | 0.80014 | 1.66E-48 | -1.69E-46 |
| MS.gene057921 | MS.gene058625 | 0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene061980 | 0.802857 | 4.60E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene065446 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene066313 | 0.805449 | 1.33E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene066335 | 0.846355 | 2.29E-59 | -1.69E-46 |
| MS.gene057921 | MS.gene067208 | 0.809307 | 2.02E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene068004 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene068924 | 0.827604 | 1.43E-54 | -1.69E-46 |
| MS.gene057921 | MS.gene069956 | 0.802909 | 4.49E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene070301 | 0.815416 | 9.35E-52 | -1.69E-46 |
| MS.gene057921 | MS.gene070818 | 0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene057921 | MS.gene071342 | 0.802032 | 6.80E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene071442 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene072397 | -0.828843 | 7.18E-55 | -1.69E-46 |
| MS.gene057921 | MS.gene072819 | 0.805641 | 1.21E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene073139 | 0.810438 | 1.15E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene07394 | 0.816272 | 6.03E-52 | -1.69E-46 |
| MS.gene057921 | MS.gene07777 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene07876 | 0.829688 | 4.48E-55 | -1.69E-46 |
| MS.gene057921 | MS.gene09233 | 0.820407 | 6.97E-53 | -1.69E-46 |
| MS.gene057921 | MS.gene09417 | 0.800873 | 1.17E-48 | -1.69E-46 |
| MS.gene057921 | MS.gene20809 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene23509 | -0.812038 | 5.18E-51 | -1.69E-46 |
| MS.gene057921 | MS.gene25151 | 0.808635 | 2.81E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene25349 | 0.811348 | 7.32E-51 | -1.69E-46 |
| MS.gene057921 | MS.gene31433 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene32231 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene35375 | 0.801974 | 6.99E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene37282 | -0.805653 | 1.20E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene37612 | 0.808715 | 2.70E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene46133 | 0.800787 | 1.22E-48 | -1.69E-46 |
| MS.gene057921 | MS.gene50493 | 0.801782 | 7.65E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene50875 | 0.809472 | 1.86E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene51511 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene057921 | MS.gene51812 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene057921 | MS.gene53321 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene58547 | 0.824174 | 9.31E-54 | -1.69E-46 |
| MS.gene057921 | MS.gene58638 | 0.835426 | 1.69E-56 | -1.69E-46 |
| MS.gene057921 | MS.gene58802 | 0.802851 | 4.61E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene60827 | 0.801006 | 1.10E-48 | -1.69E-46 |
| MS.gene057921 | MS.gene67746 | 0.807993 | 3.85E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene68824 | 0.823695 | 1.21E-53 | -1.69E-46 |
| MS.gene057921 | MS.gene68826 | 0.824896 | 6.29E-54 | -1.69E-46 |
| MS.gene057921 | MS.gene68999 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene71440 | 0.804262 | 2.35E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene74257 | 0.803482 | 3.41E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene74869 | 0.809209 | 2.12E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene75963 | 0.813132 | 2.99E-51 | -1.69E-46 |
| MS.gene057921 | MS.gene76148 | 0.801886 | 7.29E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene81047 | 0.81524 | 1.02E-51 | -1.69E-46 |
| MS.gene057921 | MS.gene82568 | 0.805044 | 1.61E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene84375 | 0.803594 | 3.24E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene88171 | 0.80617 | 9.37E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene89985 | 0.816621 | 5.03E-52 | -1.69E-46 |
| MS.gene057921 | MS.gene90022 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene90651 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene93764 | 0.815665 | 8.23E-52 | -1.69E-46 |
| MS.gene057921 | MS.gene94604 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene94608 | 0.807964 | 3.91E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene98087 | 0.80818 | 3.52E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene98088 | 0.803305 | 3.71E-49 | -1.69E-46 |
| MS.gene057921 | MS.gene98611 | 0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene057921 | MS.gene98612 | 0.809404 | 1.92E-50 | -1.69E-46 |
| MS.gene057921 | MS.gene99849 | 0.800987 | 1.11E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057921.t1 | MTR_3g023760 | 88.912 | 478 | 29 | 7 | 1 | 464 | 1 | 468 | 0.0 | 744 |
| MS.gene057921.t1 | MTR_4g109340 | 39.871 | 464 | 196 | 20 | 1 | 427 | 1 | 418 | 1.01e-75 | 246 |
| MS.gene057921.t1 | MTR_4g109340 | 33.742 | 163 | 71 | 5 | 309 | 460 | 380 | 516 | 6.36e-16 | 80.5 |
| MS.gene057921.t1 | MTR_5g043930 | 32.400 | 250 | 113 | 7 | 11 | 223 | 5 | 235 | 1.72e-22 | 100 |
| MS.gene057921.t1 | MTR_4g082980 | 35.971 | 139 | 59 | 4 | 1 | 123 | 1 | 125 | 3.91e-15 | 77.8 |
| MS.gene057921.t1 | MTR_4g028610 | 25.210 | 476 | 255 | 20 | 5 | 459 | 8 | 403 | 7.31e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057921.t1 | AT1G26610 | 39.474 | 266 | 125 | 12 | 1 | 258 | 1 | 238 | 5.86e-31 | 124 |
| MS.gene057921.t1 | AT1G26590 | 28.509 | 228 | 108 | 7 | 1 | 223 | 1 | 178 | 1.65e-13 | 72.0 |
| MS.gene057921.t1 | AT1G26590 | 28.509 | 228 | 108 | 7 | 1 | 223 | 1 | 178 | 1.65e-13 | 72.0 |
| MS.gene057921.t1 | AT1G26590 | 28.509 | 228 | 108 | 7 | 1 | 223 | 1 | 178 | 1.65e-13 | 72.0 |
| MS.gene057921.t1 | AT1G26590 | 28.509 | 228 | 108 | 7 | 1 | 223 | 19 | 196 | 2.72e-13 | 71.6 |
Find 63 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCAAAGAAGTTGGATTT+TGG | 0.178546 | 3.3:-15034581 | MS.gene057921:CDS |
| CCTTGTTCTTAACTTTCTTT+TGG | 0.193235 | 3.3:+15034898 | None:intergenic |
| TCAGAAACTAAATGAGTTAA+TGG | 0.244636 | 3.3:+15034659 | None:intergenic |
| TTGCCAAAATCCAACTTCTT+TGG | 0.270716 | 3.3:+15034578 | None:intergenic |
| TTGGATCTTCTCTTTCTCTT+TGG | 0.274333 | 3.3:+15034917 | None:intergenic |
| AATGATCAAAGCAGTGAAAA+TGG | 0.281007 | 3.3:-15034200 | MS.gene057921:CDS |
| TAATCTTCCTGCTGCAAGTA+TGG | 0.286475 | 3.3:-15034081 | MS.gene057921:CDS |
| TTTCCTTCTGGTAGATCATT+AGG | 0.296213 | 3.3:-15035301 | MS.gene057921:CDS |
| TGTTGTTGATTCTGAAACTA+AGG | 0.321396 | 3.3:-15034372 | MS.gene057921:CDS |
| AAAGGATGAGAAGAAGAAAA+TGG | 0.333136 | 3.3:-15034432 | MS.gene057921:CDS |
| TAATAATGATGATGATTCTT+TGG | 0.335313 | 3.3:-15034693 | MS.gene057921:CDS |
| TGATGATGATTCTTTGGAAT+TGG | 0.360523 | 3.3:-15034687 | MS.gene057921:CDS |
| TGATTCTGATTTAGCATTTG+AGG | 0.378036 | 3.3:-15034399 | MS.gene057921:CDS |
| AGAGTTTCTGTTGTTGAGAA+TGG | 0.378659 | 3.3:-15034455 | MS.gene057921:CDS |
| AAATGGAAACAGTACTGAAT+TGG | 0.379398 | 3.3:-15034183 | MS.gene057921:CDS |
| ATGTCCTCCAAGAGCTTGAT+AGG | 0.380591 | 3.3:+15034265 | None:intergenic |
| TTACATCAGAAGGTGAATTC+AGG | 0.392222 | 3.3:-15034349 | MS.gene057921:CDS |
| AAACAGTACTGAATTGGAAT+TGG | 0.395453 | 3.3:-15034177 | MS.gene057921:CDS |
| CAATCTATGAAAGCTTTGTT+TGG | 0.400642 | 3.3:-15035025 | MS.gene057921:CDS |
| TTTCAATCCTATCAAGCTCT+TGG | 0.409327 | 3.3:-15034272 | MS.gene057921:CDS |
| TGTGTAAAGAATGTGGTAAA+GGG | 0.417853 | 3.3:-15035051 | MS.gene057921:CDS |
| ATGAAGAAGAAAGAAGGTTA+TGG | 0.434835 | 3.3:-15035169 | MS.gene057921:CDS |
| TTCTGATAATAATGATGAAA+AGG | 0.437329 | 3.3:-15034804 | MS.gene057921:CDS |
| CATTTAGTTTCTGAGATTGA+AGG | 0.443179 | 3.3:-15034650 | MS.gene057921:CDS |
| AGTAGATGCTGAGGGAAGAA+TGG | 0.451227 | 3.3:-15034153 | MS.gene057921:CDS |
| TTGTGTAAAGAATGTGGTAA+AGG | 0.465384 | 3.3:-15035052 | MS.gene057921:CDS |
| TTATCCAAAACAACATCAAA+AGG | 0.478081 | 3.3:+15035076 | None:intergenic |
| TCTTGAAGCAGAAAACCCTT+TGG | 0.484015 | 3.3:+15034223 | None:intergenic |
| TACAAACCATGGTGGTTAGT+TGG | 0.485401 | 3.3:-15034029 | MS.gene057921:CDS |
| GTTCAGATGTTAAGTCCAAA+GGG | 0.490833 | 3.3:-15034547 | MS.gene057921:CDS |
| GTGAAAGAGTTGCTGAAATG+AGG | 0.492259 | 3.3:-15034124 | MS.gene057921:CDS |
| AGAAGAATGAAGAAGAAAGA+AGG | 0.493856 | 3.3:-15035175 | MS.gene057921:CDS |
| GACATAGAGCTAGTCATAAG+AGG | 0.494451 | 3.3:-15034247 | MS.gene057921:CDS |
| CAATCCTATCAAGCTCTTGG+AGG | 0.503614 | 3.3:-15034269 | MS.gene057921:CDS |
| TGTTCAGATGTTAAGTCCAA+AGG | 0.512057 | 3.3:-15034548 | MS.gene057921:CDS |
| TGAAAGAGTTGCTGAAATGA+GGG | 0.515667 | 3.3:-15034123 | MS.gene057921:CDS |
| TCATCATCCATACTTGCAGC+AGG | 0.519738 | 3.3:+15034074 | None:intergenic |
| GCTAGTCATAAGAGGACCAA+AGG | 0.524798 | 3.3:-15034239 | MS.gene057921:CDS |
| AGAGATGTAAGACCTTGGTT+TGG | 0.525051 | 3.3:-15034743 | MS.gene057921:CDS |
| AAGAGAAAATATCAGAAAAG+AGG | 0.527607 | 3.3:-15034326 | MS.gene057921:CDS |
| ATTTAGTTTCTGAGATTGAA+GGG | 0.531202 | 3.3:-15034649 | MS.gene057921:CDS |
| CTAGTCATAAGAGGACCAAA+GGG | 0.538026 | 3.3:-15034238 | MS.gene057921:CDS |
| GAGAGTGAAGGAAATGATGA+TGG | 0.545086 | 3.3:-15034500 | MS.gene057921:CDS |
| ATCAAGCAAGAGGCAATGAT+AGG | 0.560531 | 3.3:-15033999 | MS.gene057921:CDS |
| CCTTCTGGTAGATCATTAGG+TGG | 0.567747 | 3.3:-15035298 | MS.gene057921:CDS |
| GATAAATTGTGTAAAGAATG+TGG | 0.571592 | 3.3:-15035058 | MS.gene057921:CDS |
| GAAACTAAGGTTACATCAGA+AGG | 0.573783 | 3.3:-15034359 | MS.gene057921:CDS |
| TGATGAAAAGGAACAAGAAG+AGG | 0.575044 | 3.3:-15034792 | MS.gene057921:CDS |
| ATTCTGAGATTTACAAACCA+TGG | 0.580716 | 3.3:-15034040 | MS.gene057921:CDS |
| GGAATTGGAAGTAGATGCTG+AGG | 0.586355 | 3.3:-15034162 | MS.gene057921:CDS |
| TATGATCATGATGATGATGA+TGG | 0.588201 | 3.3:-15035223 | MS.gene057921:CDS |
| TTAGTAGAGATGTAAGACCT+TGG | 0.592699 | 3.3:-15034748 | MS.gene057921:CDS |
| GAGAGAATCCAAAGAAAACA+TGG | 0.594959 | 3.3:-15035141 | MS.gene057921:CDS |
| TTCTGTTGTTGAGAATGGAA+AGG | 0.607290 | 3.3:-15034450 | MS.gene057921:CDS |
| AGTATGGATGATGAAAGAAA+TGG | 0.608964 | 3.3:-15034065 | MS.gene057921:CDS |
| TGGAAGCAGTATCAAGCAAG+AGG | 0.613537 | 3.3:-15034009 | MS.gene057921:CDS |
| GATCATTAGGTGGTCACATG+AGG | 0.626071 | 3.3:-15035288 | MS.gene057921:CDS |
| CCAAAAGAAAGTTAAGAACA+AGG | 0.628452 | 3.3:-15034898 | MS.gene057921:CDS |
| CTGAGATTTACAAACCATGG+TGG | 0.652285 | 3.3:-15034037 | MS.gene057921:CDS |
| CCACCTAATGATCTACCAGA+AGG | 0.655089 | 3.3:+15035298 | None:intergenic |
| GAATTGGAAGTAGATGCTGA+GGG | 0.674106 | 3.3:-15034161 | MS.gene057921:CDS |
| CTGCTTCCAACTAACCACCA+TGG | 0.679286 | 3.3:+15034023 | None:intergenic |
| ATAGAATTGATACCAAACCA+AGG | 0.704170 | 3.3:+15034731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTGATAATAATGATGAAA+AGG | - | chr3.3:15034534-15034553 | MS.gene057921:CDS | 20.0% |
| !!! | TAATAATGATGATGATTCTT+TGG | - | chr3.3:15034645-15034664 | MS.gene057921:CDS | 20.0% |
| ! | AAGAGAAAATATCAGAAAAG+AGG | - | chr3.3:15035012-15035031 | MS.gene057921:CDS | 25.0% |
| ! | GATAAATTGTGTAAAGAATG+TGG | - | chr3.3:15034280-15034299 | MS.gene057921:CDS | 25.0% |
| ! | TCAGAAACTAAATGAGTTAA+TGG | + | chr3.3:15034682-15034701 | None:intergenic | 25.0% |
| ! | TTATCCAAAACAACATCAAA+AGG | + | chr3.3:15034265-15034284 | None:intergenic | 25.0% |
| !!! | ATTTAGTTTCTGAGATTGAA+GGG | - | chr3.3:15034689-15034708 | MS.gene057921:CDS | 25.0% |
| !!! | GAAGAATAAGAGTTTTGAAT+TGG | - | chr3.3:15034354-15034373 | MS.gene057921:CDS | 25.0% |
| AAAGGATGAGAAGAAGAAAA+TGG | - | chr3.3:15034906-15034925 | MS.gene057921:CDS | 30.0% | |
| AATGATCAAAGCAGTGAAAA+TGG | - | chr3.3:15035138-15035157 | MS.gene057921:CDS | 30.0% | |
| AGAAGAATGAAGAAGAAAGA+AGG | - | chr3.3:15034163-15034182 | MS.gene057921:CDS | 30.0% | |
| AGTATGGATGATGAAAGAAA+TGG | - | chr3.3:15035273-15035292 | MS.gene057921:CDS | 30.0% | |
| ATAGAATTGATACCAAACCA+AGG | + | chr3.3:15034610-15034629 | None:intergenic | 30.0% | |
| ATGAAGAAGAAAGAAGGTTA+TGG | - | chr3.3:15034169-15034188 | MS.gene057921:CDS | 30.0% | |
| CCAAAAGAAAGTTAAGAACA+AGG | - | chr3.3:15034440-15034459 | MS.gene057921:CDS | 30.0% | |
| GAACAAAAAACCAAAGAAGT+TGG | - | chr3.3:15034750-15034769 | MS.gene057921:CDS | 30.0% | |
| TGATTCTGATTTAGCATTTG+AGG | - | chr3.3:15034939-15034958 | MS.gene057921:CDS | 30.0% | |
| TGTGTAAAGAATGTGGTAAA+GGG | - | chr3.3:15034287-15034306 | MS.gene057921:CDS | 30.0% | |
| TTGTGTAAAGAATGTGGTAA+AGG | - | chr3.3:15034286-15034305 | MS.gene057921:CDS | 30.0% | |
| ! | AAACAGTACTGAATTGGAAT+TGG | - | chr3.3:15035161-15035180 | MS.gene057921:CDS | 30.0% |
| ! | AAACCAAAGAAGTTGGATTT+TGG | - | chr3.3:15034757-15034776 | MS.gene057921:CDS | 30.0% |
| ! | AAATGGAAACAGTACTGAAT+TGG | - | chr3.3:15035155-15035174 | MS.gene057921:CDS | 30.0% |
| ! | AACTTCTAAACTTTTCCCTT+TGG | + | chr3.3:15034809-15034828 | None:intergenic | 30.0% |
| ! | CCTTGTTCTTAACTTTCTTT+TGG | + | chr3.3:15034443-15034462 | None:intergenic | 30.0% |
| ! | TATGATCATGATGATGATGA+TGG | - | chr3.3:15034115-15034134 | MS.gene057921:CDS | 30.0% |
| !! | AGATCCTTTTGATGTTGTTT+TGG | - | chr3.3:15034258-15034277 | MS.gene057921:CDS | 30.0% |
| !! | ATTCTGAGATTTACAAACCA+TGG | - | chr3.3:15035298-15035317 | MS.gene057921:CDS | 30.0% |
| !! | CAATCTATGAAAGCTTTGTT+TGG | - | chr3.3:15034313-15034332 | MS.gene057921:CDS | 30.0% |
| !! | CATTTAGTTTCTGAGATTGA+AGG | - | chr3.3:15034688-15034707 | MS.gene057921:CDS | 30.0% |
| !! | TGATGATGATTCTTTGGAAT+TGG | - | chr3.3:15034651-15034670 | MS.gene057921:CDS | 30.0% |
| !! | TGTTGTTGATTCTGAAACTA+AGG | - | chr3.3:15034966-15034985 | MS.gene057921:CDS | 30.0% |
| !!! | GTTTTTGATAATGAGAGTGA+AGG | - | chr3.3:15034826-15034845 | MS.gene057921:CDS | 30.0% |
| AGAGTTTCTGTTGTTGAGAA+TGG | - | chr3.3:15034883-15034902 | MS.gene057921:CDS | 35.0% | |
| GAAACTAAGGTTACATCAGA+AGG | - | chr3.3:15034979-15034998 | MS.gene057921:CDS | 35.0% | |
| GAGAGAATCCAAAGAAAACA+TGG | - | chr3.3:15034197-15034216 | MS.gene057921:CDS | 35.0% | |
| GTTCAGATGTTAAGTCCAAA+GGG | - | chr3.3:15034791-15034810 | MS.gene057921:CDS | 35.0% | |
| TGAAAGAGTTGCTGAAATGA+GGG | - | chr3.3:15035215-15035234 | MS.gene057921:CDS | 35.0% | |
| TGATGAAAAGGAACAAGAAG+AGG | - | chr3.3:15034546-15034565 | MS.gene057921:CDS | 35.0% | |
| TGTTCAGATGTTAAGTCCAA+AGG | - | chr3.3:15034790-15034809 | MS.gene057921:CDS | 35.0% | |
| TTACATCAGAAGGTGAATTC+AGG | - | chr3.3:15034989-15035008 | MS.gene057921:CDS | 35.0% | |
| TTAGTAGAGATGTAAGACCT+TGG | - | chr3.3:15034590-15034609 | MS.gene057921:CDS | 35.0% | |
| TTCTGTTGTTGAGAATGGAA+AGG | - | chr3.3:15034888-15034907 | MS.gene057921:CDS | 35.0% | |
| TTGCCAAAATCCAACTTCTT+TGG | + | chr3.3:15034763-15034782 | None:intergenic | 35.0% | |
| TTGGATCTTCTCTTTCTCTT+TGG | + | chr3.3:15034424-15034443 | None:intergenic | 35.0% | |
| TTTCAATCCTATCAAGCTCT+TGG | - | chr3.3:15035066-15035085 | MS.gene057921:CDS | 35.0% | |
| TTTCCTTCTGGTAGATCATT+AGG | - | chr3.3:15034037-15034056 | MS.gene057921:CDS | 35.0% | |
| ! | AGTACTCTCCATGTTTTCTT+TGG | + | chr3.3:15034208-15034227 | None:intergenic | 35.0% |
| ! | TGCAGAAAGAATTTTCCTTC+TGG | - | chr3.3:15034025-15034044 | MS.gene057921:CDS | 35.0% |
| AGAGATGTAAGACCTTGGTT+TGG | - | chr3.3:15034595-15034614 | MS.gene057921:CDS | 40.0% | |
| ATCAAGCAAGAGGCAATGAT+AGG | - | chr3.3:15035339-15035358 | MS.gene057921:CDS | 40.0% | |
| CTAGTCATAAGAGGACCAAA+GGG | - | chr3.3:15035100-15035119 | MS.gene057921:CDS | 40.0% | |
| CTGAGATTTACAAACCATGG+TGG | - | chr3.3:15035301-15035320 | MS.gene057921:CDS | 40.0% | |
| GAATTGGAAGTAGATGCTGA+GGG | - | chr3.3:15035177-15035196 | MS.gene057921:CDS | 40.0% | |
| GACATAGAGCTAGTCATAAG+AGG | - | chr3.3:15035091-15035110 | MS.gene057921:CDS | 40.0% | |
| GAGAGTGAAGGAAATGATGA+TGG | - | chr3.3:15034838-15034857 | MS.gene057921:CDS | 40.0% | |
| GTGAAAGAGTTGCTGAAATG+AGG | - | chr3.3:15035214-15035233 | MS.gene057921:CDS | 40.0% | |
| TAATCTTCCTGCTGCAAGTA+TGG | - | chr3.3:15035257-15035276 | MS.gene057921:CDS | 40.0% | |
| TACAAACCATGGTGGTTAGT+TGG | - | chr3.3:15035309-15035328 | MS.gene057921:CDS | 40.0% | |
| TCTTGAAGCAGAAAACCCTT+TGG | + | chr3.3:15035118-15035137 | None:intergenic | 40.0% | |
| AGTAGATGCTGAGGGAAGAA+TGG | - | chr3.3:15035185-15035204 | MS.gene057921:CDS | 45.0% | |
| ATGTCCTCCAAGAGCTTGAT+AGG | + | chr3.3:15035076-15035095 | None:intergenic | 45.0% | |
| CAATCCTATCAAGCTCTTGG+AGG | - | chr3.3:15035069-15035088 | MS.gene057921:CDS | 45.0% | |
| CCACCTAATGATCTACCAGA+AGG | + | chr3.3:15034043-15034062 | None:intergenic | 45.0% | |
| CCTTCTGGTAGATCATTAGG+TGG | - | chr3.3:15034040-15034059 | MS.gene057921:CDS | 45.0% | |
| GATCATTAGGTGGTCACATG+AGG | - | chr3.3:15034050-15034069 | MS.gene057921:CDS | 45.0% | |
| GCTAGTCATAAGAGGACCAA+AGG | - | chr3.3:15035099-15035118 | MS.gene057921:CDS | 45.0% | |
| GGAATTGGAAGTAGATGCTG+AGG | - | chr3.3:15035176-15035195 | MS.gene057921:CDS | 45.0% | |
| TCATCATCCATACTTGCAGC+AGG | + | chr3.3:15035267-15035286 | None:intergenic | 45.0% | |
| TGGAAGCAGTATCAAGCAAG+AGG | - | chr3.3:15035329-15035348 | MS.gene057921:CDS | 45.0% | |
| CTGCTTCCAACTAACCACCA+TGG | + | chr3.3:15035318-15035337 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 15033983 | 15035377 | 15033983 | ID=MS.gene057921 |
| chr3.3 | mRNA | 15033983 | 15035377 | 15033983 | ID=MS.gene057921.t1;Parent=MS.gene057921 |
| chr3.3 | exon | 15033983 | 15035377 | 15033983 | ID=MS.gene057921.t1.exon1;Parent=MS.gene057921.t1 |
| chr3.3 | CDS | 15033983 | 15035377 | 15033983 | ID=cds.MS.gene057921.t1;Parent=MS.gene057921.t1 |
| Gene Sequence |
| Protein sequence |
