Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51874.t1 | XP_013449494.1 | 98.2 | 502 | 9 | 0 | 1 | 502 | 1 | 502 | 1.80E-275 | 958 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51874.t1 | Q84XA3 | 77.1 | 502 | 115 | 0 | 1 | 502 | 1 | 502 | 2.4e-217 | 756.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51874.t1 | G7KZG9 | 98.2 | 502 | 9 | 0 | 1 | 502 | 1 | 502 | 1.3e-275 | 958.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51874 | MS.gene23437 | PPI |
| MS.gene51874 | MS.gene060923 | PPI |
| MS.gene51874 | MS.gene069038 | PPI |
| MS.gene51874 | MS.gene035194 | PPI |
| MS.gene51874 | MS.gene53517 | PPI |
| MS.gene51874 | MS.gene99779 | PPI |
| MS.gene51874 | MS.gene053443 | PPI |
| MS.gene51874 | MS.gene018651 | PPI |
| MS.gene51874 | MS.gene031378 | PPI |
| MS.gene51874 | MS.gene059880 | PPI |
| MS.gene51874 | MS.gene073888 | PPI |
| MS.gene51874 | MS.gene04418 | PPI |
| MS.gene51874 | MS.gene000480 | PPI |
| MS.gene51874 | MS.gene08109 | PPI |
| MS.gene51874 | MS.gene90360 | PPI |
| MS.gene51874 | MS.gene04079 | PPI |
| MS.gene51874 | MS.gene77392 | PPI |
| MS.gene05640 | MS.gene51874 | PPI |
| MS.gene51874 | MS.gene96949 | PPI |
| MS.gene51874 | MS.gene95644 | PPI |
| MS.gene51874 | MS.gene059878 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51874.t1 | MTR_7g085560 | 98.207 | 502 | 9 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1005 |
| MS.gene51874.t1 | MTR_7g085560 | 98.207 | 502 | 9 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51874.t1 | AT1G16350 | 72.200 | 500 | 133 | 3 | 8 | 502 | 4 | 502 | 0.0 | 718 |
| MS.gene51874.t1 | AT1G79470 | 69.323 | 502 | 145 | 5 | 8 | 502 | 4 | 503 | 0.0 | 698 |
Find 164 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACTGCTTGCATGGTATA+TGG | 0.277853 | 7.4:+21808997 | None:intergenic |
| TATCCTGAGTTAGATGTTAT+TGG | 0.295671 | 7.4:-21810564 | MS.gene51874:CDS |
| CGTGAGAGTTTCCGATTATA+TGG | 0.304251 | 7.4:-21810931 | MS.gene51874:CDS |
| TAAGGAGAGGTTAGAGCATT+TGG | 0.304384 | 7.4:-21810676 | MS.gene51874:CDS |
| CACAGAACCCTTGTCTTTAA+CGG | 0.321519 | 7.4:+21809032 | None:intergenic |
| GATTCTGTTACTAAAATAAA+AGG | 0.335337 | 7.4:+21811023 | None:intergenic |
| GGATGAAGAGGTGGTGGATT+TGG | 0.350172 | 7.4:-21810814 | MS.gene51874:CDS |
| AGGGAATTCTATTTATCAAT+TGG | 0.351573 | 7.4:-21810613 | MS.gene51874:CDS |
| AGCGGATGGAGAGTGGATGG+TGG | 0.364010 | 7.4:-21810727 | MS.gene51874:CDS |
| CTCAGGAAGTTTGCGCGGTT+GGG | 0.364915 | 7.4:-21810446 | MS.gene51874:CDS |
| GAGGAAATGAAGAAGAGAAA+TGG | 0.373725 | 7.4:-21810858 | MS.gene51874:CDS |
| AATTCTACTGGAAAATTTCT+CGG | 0.374014 | 7.4:-21810996 | MS.gene51874:CDS |
| CACGCCCTTGTCATTTCGAT+TGG | 0.374644 | 7.4:+21810950 | None:intergenic |
| TTGAGAGTTGGTATGGGATC+TGG | 0.375174 | 7.4:-21810483 | MS.gene51874:CDS |
| CACTGTCTCCGAATCCTCTA+TGG | 0.382113 | 7.4:-21811219 | MS.gene51874:CDS |
| TGGTGTGAATGCTGTGGTTT+TGG | 0.382670 | 7.4:-21810646 | MS.gene51874:CDS |
| TTCTTAGATCCAGGGTGTTA+AGG | 0.386012 | 7.4:-21808924 | MS.gene51874:CDS |
| GTCATTTCGATTGGACCAAT+TGG | 0.388934 | 7.4:+21810959 | None:intergenic |
| CTGGTAGTCTCGAGGCTCCC+GGG | 0.392525 | 7.4:-21809586 | MS.gene51874:CDS |
| GCTGGTAGTCTCGAGGCTCC+CGG | 0.396502 | 7.4:-21809587 | MS.gene51874:CDS |
| TGCTTTGTCCAGGTTCGTAC+TGG | 0.401327 | 7.4:-21807748 | MS.gene51874:intron |
| TCCCGGGGCTTATGTATATC+AGG | 0.403376 | 7.4:-21809570 | MS.gene51874:intron |
| TTGATTCAAGCTGGTGTTGA+TGG | 0.407424 | 7.4:-21810507 | MS.gene51874:CDS |
| CGATTATATGGAGGCTCCAC+CGG | 0.408688 | 7.4:-21810919 | MS.gene51874:CDS |
| TGATGGGTTGAGAGTTGGTA+TGG | 0.414297 | 7.4:-21810490 | MS.gene51874:CDS |
| ATCGTAAAAGCTTTATCGTT+GGG | 0.419043 | 7.4:-21809641 | MS.gene51874:CDS |
| TGTGCCCATCCTCTCTGAAC+CGG | 0.419967 | 7.4:-21811099 | MS.gene51874:CDS |
| CGGTGGAGCCTCCATATAAT+CGG | 0.423861 | 7.4:+21810920 | None:intergenic |
| ACTCAGGAAGTTTGCGCGGT+TGG | 0.425370 | 7.4:-21810447 | MS.gene51874:CDS |
| GATGGTGGCATCTCAAACTC+TGG | 0.425465 | 7.4:-21809668 | MS.gene51874:CDS |
| AAAATTGCCCAAGGGGTTGT+TGG | 0.425681 | 7.4:-21809057 | MS.gene51874:CDS |
| CACATGACCTTCTTAGATCC+AGG | 0.426297 | 7.4:-21808933 | MS.gene51874:CDS |
| AAATGGAAATGTTGTTGCTT+TGG | 0.427126 | 7.4:-21810841 | MS.gene51874:CDS |
| TCTGCCATGGCCGCACTTGG+TGG | 0.428151 | 7.4:-21811194 | MS.gene51874:CDS |
| ACAGAATCTGGTAATTCTAC+TGG | 0.429318 | 7.4:-21811008 | MS.gene51874:CDS |
| CAGGTTGAAGGAGGAATTCA+TGG | 0.430215 | 7.4:-21807718 | MS.gene51874:CDS |
| GGCAGAAGCCATAGAGGATT+CGG | 0.431522 | 7.4:+21811211 | None:intergenic |
| TTGCGCGGTTGGGCGTGGTC+AGG | 0.443123 | 7.4:-21810436 | MS.gene51874:intron |
| GAAGTTTGCGCGGTTGGGCG+TGG | 0.443788 | 7.4:-21810441 | MS.gene51874:CDS |
| TCCCTTCGTCGCTTCTCCTA+TGG | 0.443897 | 7.4:-21811243 | MS.gene51874:CDS |
| TGCCTTGAGTCATAGCTTCA+AGG | 0.443952 | 7.4:+21809115 | None:intergenic |
| GCTTCTGCCATGGCCGCACT+TGG | 0.446246 | 7.4:-21811197 | MS.gene51874:CDS |
| CGGATGGAGAGTGGATGGTG+GGG | 0.448262 | 7.4:-21810725 | MS.gene51874:CDS |
| GCGGATGGAGAGTGGATGGT+GGG | 0.452757 | 7.4:-21810726 | MS.gene51874:CDS |
| AACGGCTCCAACAACCCCTT+GGG | 0.454984 | 7.4:+21809050 | None:intergenic |
| ATCCGCTCCAACCGATCCTC+CGG | 0.455439 | 7.4:+21810743 | None:intergenic |
| GGGCACACGGCGGGACTTAG+CGG | 0.456013 | 7.4:+21811115 | None:intergenic |
| GATGATTAAATATGTGAAGA+AGG | 0.460528 | 7.4:-21810589 | MS.gene51874:CDS |
| GGATGGAGAGTGGATGGTGG+GGG | 0.460745 | 7.4:-21810724 | MS.gene51874:CDS |
| ACAGGGAACTGCTGTTTACA+AGG | 0.465555 | 7.4:-21809732 | MS.gene51874:intron |
| ATCGTAGGTGTAAGAGAAAC+CGG | 0.465899 | 7.4:+21811355 | None:intergenic |
| GGGAGCATCGACTGTTATGA+TGG | 0.465926 | 7.4:-21809621 | MS.gene51874:CDS |
| TAACGGCTCCAACAACCCCT+TGG | 0.477673 | 7.4:+21809049 | None:intergenic |
| GCCGCGTAACCGTCTTCGAT+TGG | 0.478813 | 7.4:+21811395 | None:intergenic |
| GGAGGATCGGTTGGAGCGGA+TGG | 0.482788 | 7.4:-21810741 | MS.gene51874:CDS |
| GAGGAGGTTGAGAGGGTGAG+AGG | 0.484489 | 7.4:-21810783 | MS.gene51874:CDS |
| GATCCTCCGGTCACCAACTT+CGG | 0.493217 | 7.4:+21810756 | None:intergenic |
| TGACGTGAAGGAGTGTTGTT+AGG | 0.495408 | 7.4:+21811155 | None:intergenic |
| AGAGAGGATGGGCACACGGC+GGG | 0.497462 | 7.4:+21811106 | None:intergenic |
| GATTATATGGAGGCTCCACC+GGG | 0.497696 | 7.4:-21810918 | MS.gene51874:CDS |
| GATTCCACCAAGTGCGGCCA+TGG | 0.504787 | 7.4:+21811190 | None:intergenic |
| GGTGTTGATGGGTTGAGAGT+TGG | 0.507985 | 7.4:-21810495 | MS.gene51874:CDS |
| ATCCTCTATGGCTTCTGCCA+TGG | 0.508811 | 7.4:-21811207 | MS.gene51874:CDS |
| GGGGATGTTACGACTGAGAC+GGG | 0.508897 | 7.4:+21811274 | None:intergenic |
| GACAAAAGAGGAGGTTGAGA+GGG | 0.509210 | 7.4:-21810790 | MS.gene51874:CDS |
| CCTGAGTTAGATGTTATTGG+TGG | 0.510947 | 7.4:-21810561 | MS.gene51874:CDS |
| TGAAGGAGGAATTCATGGAC+TGG | 0.511160 | 7.4:-21807713 | MS.gene51874:CDS |
| CACGTCAGGCTGCTATCGTC+CGG | 0.516497 | 7.4:-21811139 | MS.gene51874:CDS |
| TTAGAGCATTTGGTGAAAGC+TGG | 0.518134 | 7.4:-21810666 | MS.gene51874:CDS |
| CATATACCATGCAAGCAGTA+AGG | 0.518987 | 7.4:-21808996 | MS.gene51874:CDS |
| AGCGACGAAGGGAGTTGAGA+GGG | 0.521326 | 7.4:+21811253 | None:intergenic |
| TAACAACACTCCTTCACGTC+AGG | 0.521517 | 7.4:-21811153 | MS.gene51874:CDS |
| TGGGACGAGGGAACAAGATA+AGG | 0.524651 | 7.4:-21810694 | MS.gene51874:CDS |
| ACTGGAGCAGCACAGGTTGA+AGG | 0.526386 | 7.4:-21807730 | MS.gene51874:CDS |
| TGGTTCTATTTGTACTACTC+AGG | 0.528310 | 7.4:-21810463 | MS.gene51874:CDS |
| ATGATGGGAAGCTTCTTAGC+TGG | 0.528805 | 7.4:-21809605 | MS.gene51874:CDS |
| TATCGTAAAAGCTTTATCGT+TGG | 0.531193 | 7.4:-21809642 | MS.gene51874:CDS |
| ACCTTGCCTTACTGCTTGCA+TGG | 0.532254 | 7.4:+21808990 | None:intergenic |
| GGTTCGTACTGGAGCAGCAC+AGG | 0.533969 | 7.4:-21807737 | MS.gene51874:CDS |
| GGCTATCCGAAGTTGGTGAC+CGG | 0.542521 | 7.4:-21810762 | MS.gene51874:CDS |
| GTCCATAGGAGAAGCGACGA+AGG | 0.542663 | 7.4:+21811241 | None:intergenic |
| TGACAAAAGAGGAGGTTGAG+AGG | 0.547501 | 7.4:-21810791 | MS.gene51874:CDS |
| CGGTTGGAGCGGATGGAGAG+TGG | 0.548107 | 7.4:-21810734 | MS.gene51874:CDS |
| GCTGAGAATTTGATTCAAGC+TGG | 0.548614 | 7.4:-21810516 | MS.gene51874:CDS |
| GGTGAAGGATGAAGAGGTGG+TGG | 0.551586 | 7.4:-21810820 | MS.gene51874:CDS |
| TGGAGCGGATGGAGAGTGGA+TGG | 0.553395 | 7.4:-21810730 | MS.gene51874:CDS |
| TTAACACCCTGGATCTAAGA+AGG | 0.559140 | 7.4:+21808926 | None:intergenic |
| GGTGGATTTGGTGACAAAAG+AGG | 0.559564 | 7.4:-21810802 | MS.gene51874:CDS |
| TTGGTGACCGGAGGATCGGT+TGG | 0.559807 | 7.4:-21810750 | MS.gene51874:CDS |
| GATTCGGAGACAGTGTCCAT+AGG | 0.561445 | 7.4:+21811227 | None:intergenic |
| TAACCGTCTTCGATTGGCGG+AGG | 0.564397 | 7.4:+21811401 | None:intergenic |
| ACTCCTCCGCCAATCGAAGA+CGG | 0.564726 | 7.4:-21811404 | MS.gene51874:CDS |
| TGCTTTGGTGAAGGATGAAG+AGG | 0.564999 | 7.4:-21810826 | MS.gene51874:CDS |
| TGATTCAAGCTGGTGTTGAT+GGG | 0.565423 | 7.4:-21810506 | MS.gene51874:CDS |
| GATGGGTTGAGAGTTGGTAT+GGG | 0.574553 | 7.4:-21810489 | MS.gene51874:CDS |
| GGTGAGAGGCTATCCGAAGT+TGG | 0.575095 | 7.4:-21810769 | MS.gene51874:CDS |
| GAGTTCCACGGTAGAGAACC+CGG | 0.577584 | 7.4:+21810900 | None:intergenic |
| AAGCGACGAAGGGAGTTGAG+AGG | 0.579202 | 7.4:+21811252 | None:intergenic |
| TGACTCAAGGCAGTGATCAA+AGG | 0.583071 | 7.4:-21809104 | MS.gene51874:CDS |
| ACCTGATATACATAAGCCCC+GGG | 0.583275 | 7.4:+21809569 | None:intergenic |
| TGTTGGAGCCGTTAAAGACA+AGG | 0.584144 | 7.4:-21809040 | MS.gene51874:CDS |
| GAAGTTGGTGACCGGAGGAT+CGG | 0.587925 | 7.4:-21810754 | MS.gene51874:CDS |
| TACCTGATATACATAAGCCC+CGG | 0.587984 | 7.4:+21809568 | None:intergenic |
| CACGGCGGGACTTAGCGGTC+CGG | 0.588201 | 7.4:+21811120 | None:intergenic |
| GCGTAACCGTCTTCGATTGG+CGG | 0.588487 | 7.4:+21811398 | None:intergenic |
| TTTCCTCTTCAATCTTCGCA+AGG | 0.590215 | 7.4:+21810874 | None:intergenic |
| TCCCTTGAAGCTATGACTCA+AGG | 0.591282 | 7.4:-21809117 | MS.gene51874:CDS |
| GACCGGAGGATCGGTTGGAG+CGG | 0.594297 | 7.4:-21810745 | MS.gene51874:CDS |
| ACGATAGCAGCCTGACGTGA+AGG | 0.594517 | 7.4:+21811143 | None:intergenic |
| ATGCCACCATCAGCAATGAC+AGG | 0.596778 | 7.4:+21809680 | None:intergenic |
| AAATGTTGTTGCTTTGGTGA+AGG | 0.599445 | 7.4:-21810835 | MS.gene51874:CDS |
| GTTCCTGTCATTGCTGATGG+TGG | 0.600022 | 7.4:-21809683 | MS.gene51874:CDS |
| CTGAGTTAGATGTTATTGGT+GGG | 0.602937 | 7.4:-21810560 | MS.gene51874:CDS |
| GCAAAGCTTAAAATTGCCCA+AGG | 0.602956 | 7.4:-21809066 | MS.gene51874:CDS |
| TGACCTTGCGAAGATTGAAG+AGG | 0.605198 | 7.4:-21810877 | MS.gene51874:CDS |
| GGAGTTCCTGTCATTGCTGA+TGG | 0.606535 | 7.4:-21809686 | MS.gene51874:CDS |
| CAAAGCTTAAAATTGCCCAA+GGG | 0.607807 | 7.4:-21809065 | MS.gene51874:CDS |
| TACCTCTAGCCTTAACACCC+TGG | 0.607961 | 7.4:+21808915 | None:intergenic |
| TGTAGTGAGGGAGGAAGATG+AGG | 0.611469 | 7.4:+21811330 | None:intergenic |
| TCCATAGGAGAAGCGACGAA+GGG | 0.611484 | 7.4:+21811242 | None:intergenic |
| ATCCAGGGTGTTAAGGCTAG+AGG | 0.611715 | 7.4:-21808917 | MS.gene51874:intron |
| CGGCGAAGTCGATGTAGTGA+GGG | 0.612539 | 7.4:+21811318 | None:intergenic |
| GCGGCGAAGTCGATGTAGTG+AGG | 0.613902 | 7.4:+21811317 | None:intergenic |
| ATGTGCAGACTGCAGAGAGT+TGG | 0.614113 | 7.4:+21808951 | None:intergenic |
| TACGACTGAGACGGGAGGAG+AGG | 0.614422 | 7.4:+21811282 | None:intergenic |
| GCGACGAAGGGAGTTGAGAG+GGG | 0.616107 | 7.4:+21811254 | None:intergenic |
| GGCAGTGATCAAAGGTACCT+CGG | 0.616960 | 7.4:-21809096 | MS.gene51874:CDS |
| GGAGCATCGACTGTTATGAT+GGG | 0.618284 | 7.4:-21809620 | MS.gene51874:CDS |
| GCCTTGAGTCATAGCTTCAA+GGG | 0.619235 | 7.4:+21809116 | None:intergenic |
| GTTCAGAGAGGATGGGCACA+CGG | 0.625248 | 7.4:+21811102 | None:intergenic |
| TACTACTCAGGAAGTTTGCG+CGG | 0.625490 | 7.4:-21810451 | MS.gene51874:CDS |
| GTTGGAGCCGTTAAAGACAA+GGG | 0.626283 | 7.4:-21809039 | MS.gene51874:CDS |
| GAGGAAGATGAGGTCATCGT+AGG | 0.626293 | 7.4:+21811340 | None:intergenic |
| TTGGTCCAATCGAAATGACA+AGG | 0.627219 | 7.4:-21810955 | MS.gene51874:CDS |
| AAAGCTTAAAATTGCCCAAG+GGG | 0.628138 | 7.4:-21809064 | MS.gene51874:CDS |
| TGGTAGTCTCGAGGCTCCCG+GGG | 0.630926 | 7.4:-21809585 | MS.gene51874:CDS |
| ACATGACCTTCTTAGATCCA+GGG | 0.631372 | 7.4:-21808932 | MS.gene51874:CDS |
| CGACGAAGGGAGTTGAGAGG+GGG | 0.632384 | 7.4:+21811255 | None:intergenic |
| CTCCACCGGGTTCTCTACCG+TGG | 0.633134 | 7.4:-21810905 | MS.gene51874:CDS |
| CCACCAATAACATCTAACTC+AGG | 0.635588 | 7.4:+21810561 | None:intergenic |
| TTTGGTGAAGGATGAAGAGG+TGG | 0.638094 | 7.4:-21810823 | MS.gene51874:CDS |
| GGCCATGGCAGAAGCCATAG+AGG | 0.638566 | 7.4:+21811205 | None:intergenic |
| AACAGCGATTCCACCAAGTG+CGG | 0.639761 | 7.4:+21811184 | None:intergenic |
| CGAAGTCGATGTAGTGAGGG+AGG | 0.643395 | 7.4:+21811321 | None:intergenic |
| GAGAGTTTCCGATTATATGG+AGG | 0.644523 | 7.4:-21810928 | MS.gene51874:CDS |
| CTTCTTAGCTGGTAGTCTCG+AGG | 0.644935 | 7.4:-21809594 | MS.gene51874:CDS |
| CGAGGGAACAAGATAAGGAG+AGG | 0.649099 | 7.4:-21810689 | MS.gene51874:CDS |
| TATCCGAAGTTGGTGACCGG+AGG | 0.650093 | 7.4:-21810759 | MS.gene51874:CDS |
| TCAGAATCGATTACAGCGGA+CGG | 0.650139 | 7.4:+21811065 | None:intergenic |
| ACCATGCAAGCAGTAAGGCA+AGG | 0.650696 | 7.4:-21808991 | MS.gene51874:CDS |
| GCCAATCGAAGACGGTTACG+CGG | 0.652065 | 7.4:-21811396 | MS.gene51874:CDS |
| GAAAGCTGGTGTGAATGCTG+TGG | 0.657777 | 7.4:-21810652 | MS.gene51874:CDS |
| GGAGCAGCACAGGTTGAAGG+AGG | 0.660899 | 7.4:-21807727 | MS.gene51874:CDS |
| TTCGCAAGGTCAGAGTTCCA+CGG | 0.665644 | 7.4:+21810888 | None:intergenic |
| CAGAGAGGATGGGCACACGG+CGG | 0.679951 | 7.4:+21811105 | None:intergenic |
| AAAACCGGTTCAGAGAGGAT+GGG | 0.694202 | 7.4:+21811095 | None:intergenic |
| GGAGAGGTCGACTTCATCAG+CGG | 0.694285 | 7.4:+21811298 | None:intergenic |
| TGGTCCAATCGAAATGACAA+GGG | 0.694909 | 7.4:-21810954 | MS.gene51874:CDS |
| GGATTTGGTGACAAAAGAGG+AGG | 0.695676 | 7.4:-21810799 | MS.gene51874:CDS |
| GATGTTACGACTGAGACGGG+AGG | 0.697292 | 7.4:+21811277 | None:intergenic |
| AATCGAAGACGGTTACGCGG+CGG | 0.728337 | 7.4:-21811393 | MS.gene51874:CDS |
| TAAGCTTTGCTGTATCACCG+AGG | 0.732907 | 7.4:+21809079 | None:intergenic |
| GTCTTCAGAATCGATTACAG+CGG | 0.740744 | 7.4:+21811061 | None:intergenic |
| TTCCACGGTAGAGAACCCGG+TGG | 0.809206 | 7.4:+21810903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTCTAATTAGT+TGG | - | chr7.4:21810874-21810893 | MS.gene51874:CDS | 10.0% |
| !! | AAAAAAAATTCTAATTAGTT+GGG | - | chr7.4:21810875-21810894 | MS.gene51874:CDS | 10.0% |
| !!! | AAGAAAGTATTAAAAATAAA+AGG | - | chr7.4:21809199-21809218 | MS.gene51874:intron | 10.0% |
| !!! | AGAAAGTATTAAAAATAAAA+GGG | - | chr7.4:21809200-21809219 | MS.gene51874:intron | 10.0% |
| !! | AAACAAAAGATAATCATTTG+AGG | + | chr7.4:21811102-21811121 | None:intergenic | 20.0% |
| !! | AAAGATCATTAACATCAAAT+TGG | - | chr7.4:21811075-21811094 | MS.gene51874:CDS | 20.0% |
| !! | AATTGAGTAACAATACATTA+TGG | + | chr7.4:21811324-21811343 | None:intergenic | 20.0% |
| !! | AATTGAGTAACATTACATTA+TGG | + | chr7.4:21811252-21811271 | None:intergenic | 20.0% |
| !! | ATTTCTCCAATAAATAAAAG+TGG | - | chr7.4:21810676-21810695 | MS.gene51874:CDS | 20.0% |
| !! | CTACAAAAAATTATTGATAG+TGG | + | chr7.4:21811150-21811169 | None:intergenic | 20.0% |
| !! | GATTCTGTTACTAAAATAAA+AGG | + | chr7.4:21808080-21808099 | None:intergenic | 20.0% |
| !! | GTAAAAAAGACAAATATTGT+GGG | - | chr7.4:21810614-21810633 | MS.gene51874:CDS | 20.0% |
| !! | TAAAAAAGACAAATATTGTG+GGG | - | chr7.4:21810615-21810634 | MS.gene51874:CDS | 20.0% |
| !! | TAAACAAGAAAACATGAAAA+AGG | - | chr7.4:21810477-21810496 | MS.gene51874:CDS | 20.0% |
| !! | TGTAAAAAAGACAAATATTG+TGG | - | chr7.4:21810613-21810632 | MS.gene51874:CDS | 20.0% |
| !!! | ACAGTTCACTATTTTTAAAA+AGG | + | chr7.4:21809649-21809668 | None:intergenic | 20.0% |
| !!! | GTCTTTTTTACAAAATAGAT+AGG | + | chr7.4:21810605-21810624 | None:intergenic | 20.0% |
| !!! | TCATAATCTTTTGAAGATAA+TGG | - | chr7.4:21811203-21811222 | MS.gene51874:CDS | 20.0% |
| !!! | TGTCTTTTACAAAATATAAG+AGG | + | chr7.4:21810555-21810574 | None:intergenic | 20.0% |
| !!! | TTCTTGTTTAAAGAATGAAA+TGG | + | chr7.4:21810467-21810486 | None:intergenic | 20.0% |
| !!! | TTTATTTTAGTAACAGAATC+TGG | - | chr7.4:21808080-21808099 | MS.gene51874:intron | 20.0% |
| !!! | TTTGAATGTGAAAAGTATTT+CGG | - | chr7.4:21809715-21809734 | MS.gene51874:CDS | 20.0% |
| !!! | TTTTAATACTTTCTTGAGAA+TGG | + | chr7.4:21809194-21809213 | None:intergenic | 20.0% |
| !!! | TTTTTTACAAAATAGATAGG+AGG | + | chr7.4:21810602-21810621 | None:intergenic | 20.0% |
| ! | AAAGAATGAAATGGATGAAA+TGG | + | chr7.4:21810458-21810477 | None:intergenic | 25.0% |
| ! | AAAGTTAGGATAACAGTAAT+AGG | - | chr7.4:21810388-21810407 | MS.gene51874:intron | 25.0% |
| ! | AAATGAAACAGCTACAATAA+CGG | + | chr7.4:21810257-21810276 | None:intergenic | 25.0% |
| ! | AATTCTACTGGAAAATTTCT+CGG | - | chr7.4:21808104-21808123 | MS.gene51874:intron | 25.0% |
| ! | AGAAAATCATCACTATCTAA+AGG | + | chr7.4:21809237-21809256 | None:intergenic | 25.0% |
| ! | AGGGAATTCTATTTATCAAT+TGG | - | chr7.4:21808487-21808506 | MS.gene51874:intron | 25.0% |
| ! | CATGAGTTAAATAGAAGATT+AGG | + | chr7.4:21810319-21810338 | None:intergenic | 25.0% |
| ! | CTTGAATTGAAAATCAAAAG+AGG | - | chr7.4:21810910-21810929 | MS.gene51874:CDS | 25.0% |
| ! | GATGATTAAATATGTGAAGA+AGG | - | chr7.4:21808511-21808530 | MS.gene51874:intron | 25.0% |
| ! | GTAAGTTGTTTAACCAAATA+TGG | + | chr7.4:21808804-21808823 | None:intergenic | 25.0% |
| ! | TACATTTCTTACTCTTTCTT+TGG | - | chr7.4:21809836-21809855 | MS.gene51874:intron | 25.0% |
| ! | TATATACGAAACTAAATGAC+AGG | + | chr7.4:21809876-21809895 | None:intergenic | 25.0% |
| ! | TCATCCATTGCTTATAAAAA+TGG | - | chr7.4:21809393-21809412 | MS.gene51874:intron | 25.0% |
| ! | TTTCATTTACGCAATCAAAA+TGG | - | chr7.4:21810269-21810288 | MS.gene51874:intron | 25.0% |
| !! | ATGTCATTTAAGAACCAATT+TGG | - | chr7.4:21811176-21811195 | MS.gene51874:CDS | 25.0% |
| !!! | AACTCCATTTTTATAAGCAA+TGG | + | chr7.4:21809400-21809419 | None:intergenic | 25.0% |
| !!! | GCTTATTTTATCTTATCTAC+TGG | + | chr7.4:21808976-21808995 | None:intergenic | 25.0% |
| !!! | GTTTTTATTTGGTGTGTATA+TGG | - | chr7.4:21809787-21809806 | MS.gene51874:intron | 25.0% |
| !!! | TCTATTGATTTAATCCTTTC+CGG | + | chr7.4:21810838-21810857 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTGCTCCAGAA+TGG | - | chr7.4:21809929-21809948 | MS.gene51874:intron | 25.0% |
| AAACATATGCATGCATAACT+GGG | + | chr7.4:21808876-21808895 | None:intergenic | 30.0% | |
| AAACTAAATGACAGGAAACA+AGG | + | chr7.4:21809868-21809887 | None:intergenic | 30.0% | |
| AAGATTATGAGAGACCAAAT+TGG | + | chr7.4:21811193-21811212 | None:intergenic | 30.0% | |
| AAGCTTCAAATCTTACGAAA+AGG | + | chr7.4:21809592-21809611 | None:intergenic | 30.0% | |
| AGACTCGATATTAAGAATCA+GGG | + | chr7.4:21809341-21809360 | None:intergenic | 30.0% | |
| AGATTTCTAATTCTTTCCAC+CGG | - | chr7.4:21810816-21810835 | MS.gene51874:CDS | 30.0% | |
| CTTTCACTAAACTATTACTG+TGG | - | chr7.4:21809028-21809047 | MS.gene51874:CDS | 30.0% | |
| GTATTCACACAAAACACTTA+TGG | + | chr7.4:21811011-21811030 | None:intergenic | 30.0% | |
| TATCCTGAGTTAGATGTTAT+TGG | - | chr7.4:21808536-21808555 | MS.gene51874:intron | 30.0% | |
| TGAGTAACAATACATTATGG+TGG | + | chr7.4:21811321-21811340 | None:intergenic | 30.0% | |
| TGAGTAACATTACATTATGG+TGG | + | chr7.4:21811249-21811268 | None:intergenic | 30.0% | |
| TGATGAAAACTTGTGAATTG+TGG | - | chr7.4:21809563-21809582 | MS.gene51874:intron | 30.0% | |
| ! | AAATGGAAATGTTGTTGCTT+TGG | - | chr7.4:21808259-21808278 | MS.gene51874:intron | 30.0% |
| ! | AATTCACAAGTTTTCATCAG+GGG | + | chr7.4:21809562-21809581 | None:intergenic | 30.0% |
| ! | ACAATTCACAAGTTTTCATC+AGG | + | chr7.4:21809564-21809583 | None:intergenic | 30.0% |
| ! | AGTATTCTTATTTCTTGCTC+TGG | - | chr7.4:21810218-21810237 | MS.gene51874:intron | 30.0% |
| ! | ATCGTAAAAGCTTTATCGTT+GGG | - | chr7.4:21809459-21809478 | MS.gene51874:intron | 30.0% |
| ! | CAATTCACAAGTTTTCATCA+GGG | + | chr7.4:21809563-21809582 | None:intergenic | 30.0% |
| ! | GTCAAAAAGTATAGAGGAAT+GGG | - | chr7.4:21809959-21809978 | MS.gene51874:intron | 30.0% |
| ! | TATCGTAAAAGCTTTATCGT+TGG | - | chr7.4:21809458-21809477 | MS.gene51874:intron | 30.0% |
| ! | TGTCAAAAAGTATAGAGGAA+TGG | - | chr7.4:21809958-21809977 | MS.gene51874:intron | 30.0% |
| ! | TGTCATTTGAACATGCTTTA+GGG | - | chr7.4:21810642-21810661 | MS.gene51874:CDS | 30.0% |
| !! | CACTCACCACTTTTATTTAT+TGG | + | chr7.4:21810685-21810704 | None:intergenic | 30.0% |
| !! | TTATCTGCTTTTGAAGACAA+TGG | - | chr7.4:21811275-21811294 | MS.gene51874:CDS | 30.0% |
| !! | TTTTTCGAACAATAGCAGTT+TGG | - | chr7.4:21811122-21811141 | MS.gene51874:CDS | 30.0% |
| !!! | ACTGACGTGTTGTTTTTATT+TGG | - | chr7.4:21809776-21809795 | MS.gene51874:intron | 30.0% |
| AAAGCTCAAAACAACACGTA+CGG | + | chr7.4:21809012-21809031 | None:intergenic | 35.0% | |
| AAAGCTTAAAATTGCCCAAG+GGG | - | chr7.4:21810036-21810055 | MS.gene51874:intron | 35.0% | |
| ACAGAATCTGGTAATTCTAC+TGG | - | chr7.4:21808092-21808111 | MS.gene51874:intron | 35.0% | |
| ACCAAATATGGTCACAATCA+AGG | + | chr7.4:21808792-21808811 | None:intergenic | 35.0% | |
| ATGAAAAATAGCACTACCCT+CGG | + | chr7.4:21810758-21810777 | None:intergenic | 35.0% | |
| ATGGCTTCTAGCAAATTACA+CGG | + | chr7.4:21810992-21811011 | None:intergenic | 35.0% | |
| CAAACATATGCATGCATAAC+TGG | + | chr7.4:21808877-21808896 | None:intergenic | 35.0% | |
| CAAAGCTTAAAATTGCCCAA+GGG | - | chr7.4:21810035-21810054 | MS.gene51874:intron | 35.0% | |
| CACTGTAATGTAATTGTCGA+TGG | - | chr7.4:21810939-21810958 | MS.gene51874:CDS | 35.0% | |
| CAGACTCGATATTAAGAATC+AGG | + | chr7.4:21809342-21809361 | None:intergenic | 35.0% | |
| CAGTTATGCATGCATATGTT+TGG | - | chr7.4:21808875-21808894 | MS.gene51874:intron | 35.0% | |
| CTGAGTTAGATGTTATTGGT+GGG | - | chr7.4:21808540-21808559 | MS.gene51874:intron | 35.0% | |
| GAGGAAATGAAGAAGAGAAA+TGG | - | chr7.4:21808242-21808261 | MS.gene51874:intron | 35.0% | |
| GATTCTTAATATCGAGTCTG+TGG | - | chr7.4:21809342-21809361 | MS.gene51874:intron | 35.0% | |
| GTAACAATACATTATGGTGG+AGG | + | chr7.4:21811318-21811337 | None:intergenic | 35.0% | |
| GTATGTCTCACTATTCTCAT+GGG | + | chr7.4:21810531-21810550 | None:intergenic | 35.0% | |
| TGTATGTCTCACTATTCTCA+TGG | + | chr7.4:21810532-21810551 | None:intergenic | 35.0% | |
| TTCATATAAACTCCCCAGAT+TGG | - | chr7.4:21811046-21811065 | MS.gene51874:CDS | 35.0% | |
| TTGTAGCAACAAAGGATCAT+TGG | + | chr7.4:21809109-21809128 | None:intergenic | 35.0% | |
| ! | ATCTACTGGCATCAACTTTT+GGG | + | chr7.4:21808962-21808981 | None:intergenic | 35.0% |
| ! | ATCTTTTGCATACCAATCTG+GGG | + | chr7.4:21811061-21811080 | None:intergenic | 35.0% |
| ! | ATGCACATAGCATTTTTCAC+TGG | - | chr7.4:21810336-21810355 | MS.gene51874:intron | 35.0% |
| ! | ATTGATTTAATCCTTTCCGG+TGG | + | chr7.4:21810835-21810854 | None:intergenic | 35.0% |
| ! | CAACGTGTCAAAAAGTATAG+AGG | - | chr7.4:21809953-21809972 | MS.gene51874:intron | 35.0% |
| ! | CTGTTATCCTAACTTTTCCA+CGG | + | chr7.4:21810384-21810403 | None:intergenic | 35.0% |
| ! | GATCTTTTGCATACCAATCT+GGG | + | chr7.4:21811062-21811081 | None:intergenic | 35.0% |
| ! | TATCTACTGGCATCAACTTT+TGG | + | chr7.4:21808963-21808982 | None:intergenic | 35.0% |
| ! | TGATCTTTTGCATACCAATC+TGG | + | chr7.4:21811063-21811082 | None:intergenic | 35.0% |
| ! | TGGTTCTATTTGTACTACTC+AGG | - | chr7.4:21808637-21808656 | MS.gene51874:intron | 35.0% |
| ! | TGTCATTTAAGCATAACCGA+GGG | - | chr7.4:21810739-21810758 | MS.gene51874:CDS | 35.0% |
| ! | TGTTATCCTAACTTTTCCAC+GGG | + | chr7.4:21810383-21810402 | None:intergenic | 35.0% |
| ! | TTGTCATTTAAGCATAACCG+AGG | - | chr7.4:21810738-21810757 | MS.gene51874:CDS | 35.0% |
| !! | AAATGTTGTTGCTTTGGTGA+AGG | - | chr7.4:21808265-21808284 | MS.gene51874:intron | 35.0% |
| !! | AGGCAAGGTTTTCAAGATAT+TGG | - | chr7.4:21810124-21810143 | MS.gene51874:intron | 35.0% |
| !! | CAACTTTTGGGAGCTTATTT+GGG | + | chr7.4:21808950-21808969 | None:intergenic | 35.0% |
| !! | CTCTATACTTTTTGACACGT+TGG | + | chr7.4:21809955-21809974 | None:intergenic | 35.0% |
| !! | GTGTCATTTGAACATGCTTT+AGG | - | chr7.4:21810641-21810660 | MS.gene51874:CDS | 35.0% |
| !! | TCAACTTTTGGGAGCTTATT+TGG | + | chr7.4:21808951-21808970 | None:intergenic | 35.0% |
| !! | TTTGAACAGTTTGTTGCATC+TGG | - | chr7.4:21808724-21808743 | MS.gene51874:intron | 35.0% |
| !!! | GTTTTGTTTCGAAGACCAAT+TGG | - | chr7.4:21808126-21808145 | MS.gene51874:intron | 35.0% |
| !!! | TGGTTTTGGATAGTTCACAA+GGG | - | chr7.4:21808468-21808487 | MS.gene51874:intron | 35.0% |
| ACATGACCTTCTTAGATCCA+GGG | - | chr7.4:21810168-21810187 | MS.gene51874:intron | 40.0% | |
| ACGGCTTATTGTAGCAACAA+AGG | + | chr7.4:21809117-21809136 | None:intergenic | 40.0% | |
| ATCGTAGGTGTAAGAGAAAC+CGG | + | chr7.4:21807748-21807767 | None:intergenic | 40.0% | |
| ATGTAATTGTCGATGGTCCA+AGG | - | chr7.4:21810946-21810965 | MS.gene51874:CDS | 40.0% | |
| ATTGTGTATCTTGATGCGTG+TGG | - | chr7.4:21809677-21809696 | MS.gene51874:CDS | 40.0% | |
| CACAGAACCCTTGTCTTTAA+CGG | + | chr7.4:21810071-21810090 | None:intergenic | 40.0% | |
| CATATACCATGCAAGCAGTA+AGG | - | chr7.4:21810104-21810123 | MS.gene51874:intron | 40.0% | |
| CCACCAATAACATCTAACTC+AGG | + | chr7.4:21808542-21808561 | None:intergenic | 40.0% | |
| CCTGAGTTAGATGTTATTGG+TGG | - | chr7.4:21808539-21808558 | MS.gene51874:intron | 40.0% | |
| CGAATTCCAGATATTGCTCA+AGG | - | chr7.4:21809315-21809334 | MS.gene51874:intron | 40.0% | |
| CGTGAGAGTTTCCGATTATA+TGG | - | chr7.4:21808169-21808188 | MS.gene51874:intron | 40.0% | |
| CTTACTGCTTGCATGGTATA+TGG | + | chr7.4:21810106-21810125 | None:intergenic | 40.0% | |
| GAGAGTTTCCGATTATATGG+AGG | - | chr7.4:21808172-21808191 | MS.gene51874:intron | 40.0% | |
| GCAAAGCTTAAAATTGCCCA+AGG | - | chr7.4:21810034-21810053 | MS.gene51874:intron | 40.0% | |
| GCCTTGATTGTGACCATATT+TGG | - | chr7.4:21808788-21808807 | MS.gene51874:intron | 40.0% | |
| GCTGAGAATTTGATTCAAGC+TGG | - | chr7.4:21808584-21808603 | MS.gene51874:intron | 40.0% | |
| GTCATTTCGATTGGACCAAT+TGG | + | chr7.4:21808144-21808163 | None:intergenic | 40.0% | |
| GTCTTCAGAATCGATTACAG+CGG | + | chr7.4:21808042-21808061 | None:intergenic | 40.0% | |
| TACCTGATATACATAAGCCC+CGG | + | chr7.4:21809535-21809554 | None:intergenic | 40.0% | |
| TCTAATTCTTTCCACCGGAA+AGG | - | chr7.4:21810821-21810840 | MS.gene51874:CDS | 40.0% | |
| TGGTCCAATCGAAATGACAA+GGG | - | chr7.4:21808146-21808165 | MS.gene51874:intron | 40.0% | |
| TGTAATTGTCGATGGTCCAA+GGG | - | chr7.4:21810947-21810966 | MS.gene51874:CDS | 40.0% | |
| TTAACACCCTGGATCTAAGA+AGG | + | chr7.4:21810177-21810196 | None:intergenic | 40.0% | |
| TTACGTTATCTGCTTTGTCC+AGG | - | chr7.4:21811342-21811361 | MS.gene51874:CDS | 40.0% | |
| TTGGTCCAATCGAAATGACA+AGG | - | chr7.4:21808145-21808164 | MS.gene51874:intron | 40.0% | |
| TTGTTGCTACAATAAGCCGT+GGG | - | chr7.4:21809117-21809136 | MS.gene51874:CDS | 40.0% | |
| TTTCCTCTTCAATCTTCGCA+AGG | + | chr7.4:21808229-21808248 | None:intergenic | 40.0% | |
| TTTGTTGCTACAATAAGCCG+TGG | - | chr7.4:21809116-21809135 | MS.gene51874:CDS | 40.0% | |
| ! | AAACAAAAACCGGTTCAGAG+AGG | + | chr7.4:21808013-21808032 | None:intergenic | 40.0% |
| ! | AACAACACGTACGGTTTGTT+TGG | + | chr7.4:21809003-21809022 | None:intergenic | 40.0% |
| ! | AGGTGAGTGTAATTGATGAC+AGG | + | chr7.4:21810582-21810601 | None:intergenic | 40.0% |
| ! | TAAGGAGAGGTTAGAGCATT+TGG | - | chr7.4:21808424-21808443 | MS.gene51874:intron | 40.0% |
| ! | TTAGAGCATTTGGTGAAAGC+TGG | - | chr7.4:21808434-21808453 | MS.gene51874:intron | 40.0% |
| ! | TTCTTAGATCCAGGGTGTTA+AGG | - | chr7.4:21810176-21810195 | MS.gene51874:intron | 40.0% |
| ! | TTGATTCAAGCTGGTGTTGA+TGG | - | chr7.4:21808593-21808612 | MS.gene51874:intron | 40.0% |
| ! | TTTTCCACGGGCAATACTTA+TGG | + | chr7.4:21810371-21810390 | None:intergenic | 40.0% |
| !! | TGATTCAAGCTGGTGTTGAT+GGG | - | chr7.4:21808594-21808613 | MS.gene51874:intron | 40.0% |
| !! | TGGCTTTGGATTGTTGTTGT+AGG | - | chr7.4:21808744-21808763 | MS.gene51874:intron | 40.0% |
| !!! | GTGGTTTTGGATAGTTCACA+AGG | - | chr7.4:21808467-21808486 | MS.gene51874:intron | 40.0% |
| AAAATTGCCCAAGGGGTTGT+TGG | - | chr7.4:21810043-21810062 | MS.gene51874:intron | 45.0% | |
| ACCTGATATACATAAGCCCC+GGG | + | chr7.4:21809534-21809553 | None:intergenic | 45.0% | |
| ATATCGAGTCTGTGGTTGAC+AGG | - | chr7.4:21809350-21809369 | MS.gene51874:intron | 45.0% | |
| CACATGACCTTCTTAGATCC+AGG | - | chr7.4:21810167-21810186 | MS.gene51874:intron | 45.0% | |
| GACAAAAGAGGAGGTTGAGA+GGG | - | chr7.4:21808310-21808329 | MS.gene51874:intron | 45.0% | |
| GCCTTGAGTCATAGCTTCAA+GGG | + | chr7.4:21809987-21810006 | None:intergenic | 45.0% | |
| GTAATTGTCGATGGTCCAAG+GGG | - | chr7.4:21810948-21810967 | MS.gene51874:CDS | 45.0% | |
| GTATTGCCCGTGGAAAAGTT+AGG | - | chr7.4:21810374-21810393 | MS.gene51874:intron | 45.0% | |
| GTTGGAGCCGTTAAAGACAA+GGG | - | chr7.4:21810061-21810080 | MS.gene51874:intron | 45.0% | |
| TAACAACACTCCTTCACGTC+AGG | - | chr7.4:21807947-21807966 | MS.gene51874:intron | 45.0% | |
| TACTACTCAGGAAGTTTGCG+CGG | - | chr7.4:21808649-21808668 | MS.gene51874:intron | 45.0% | |
| TATCGAGTCTGTGGTTGACA+GGG | - | chr7.4:21809351-21809370 | MS.gene51874:intron | 45.0% | |
| TCAGAATCGATTACAGCGGA+CGG | + | chr7.4:21808038-21808057 | None:intergenic | 45.0% | |
| TCCCTTGAAGCTATGACTCA+AGG | - | chr7.4:21809983-21810002 | MS.gene51874:intron | 45.0% | |
| TGAAGGAGGAATTCATGGAC+TGG | - | chr7.4:21811387-21811406 | MS.gene51874:CDS | 45.0% | |
| TGACAAAAGAGGAGGTTGAG+AGG | - | chr7.4:21808309-21808328 | MS.gene51874:intron | 45.0% | |
| TGACCTTGCGAAGATTGAAG+AGG | - | chr7.4:21808223-21808242 | MS.gene51874:intron | 45.0% | |
| TGACTCAAGGCAGTGATCAA+AGG | - | chr7.4:21809996-21810015 | MS.gene51874:intron | 45.0% | |
| TGCCTTGAGTCATAGCTTCA+AGG | + | chr7.4:21809988-21810007 | None:intergenic | 45.0% | |
| TGCTTTGGTGAAGGATGAAG+AGG | - | chr7.4:21808274-21808293 | MS.gene51874:intron | 45.0% | |
| TGTATCTTGATGCGTGTGGT+TGG | - | chr7.4:21809681-21809700 | MS.gene51874:CDS | 45.0% | |
| TGTCTCACTATTCTCATGGG+AGG | + | chr7.4:21810528-21810547 | None:intergenic | 45.0% | |
| TGTTGCTACAATAAGCCGTG+GGG | - | chr7.4:21809118-21809137 | MS.gene51874:CDS | 45.0% | |
| TGTTGGAGCCGTTAAAGACA+AGG | - | chr7.4:21810060-21810079 | MS.gene51874:intron | 45.0% | |
| TTTGGTGAAGGATGAAGAGG+TGG | - | chr7.4:21808277-21808296 | MS.gene51874:intron | 45.0% | |
| ! | AAAAACCGGTTCAGAGAGGA+TGG | + | chr7.4:21808009-21808028 | None:intergenic | 45.0% |
| ! | AAAACCGGTTCAGAGAGGAT+GGG | + | chr7.4:21808008-21808027 | None:intergenic | 45.0% |
| ! | ACAGGGAACTGCTGTTTACA+AGG | - | chr7.4:21809368-21809387 | MS.gene51874:intron | 45.0% |
| ! | ATGATGGGAAGCTTCTTAGC+TGG | - | chr7.4:21809495-21809514 | MS.gene51874:intron | 45.0% |
| ! | CACAAGTTTTCATCAGGGGT+TGG | + | chr7.4:21809558-21809577 | None:intergenic | 45.0% |
| ! | CAGGTTGAAGGAGGAATTCA+TGG | - | chr7.4:21811382-21811401 | MS.gene51874:CDS | 45.0% |
| ! | GTATCCATAAGTATTGCCCG+TGG | - | chr7.4:21810364-21810383 | MS.gene51874:intron | 45.0% |
| ! | TAAGCTTTGCTGTATCACCG+AGG | + | chr7.4:21810024-21810043 | None:intergenic | 45.0% |
| ! | TGGTGTGAATGCTGTGGTTT+TGG | - | chr7.4:21808454-21808473 | MS.gene51874:intron | 45.0% |
| ! | TTTGAAGCTTGTGCTGTGTG+TGG | - | chr7.4:21809602-21809621 | MS.gene51874:CDS | 45.0% |
| ! | TTTTGACACGTTGGCCATTC+TGG | + | chr7.4:21809946-21809965 | None:intergenic | 45.0% |
| !! | CAGTTTGTTGCATCTGGCTT+TGG | - | chr7.4:21808730-21808749 | MS.gene51874:intron | 45.0% |
| !! | GATGGGTTGAGAGTTGGTAT+GGG | - | chr7.4:21808611-21808630 | MS.gene51874:intron | 45.0% |
| !! | GGAGCATCGACTGTTATGAT+GGG | - | chr7.4:21809480-21809499 | MS.gene51874:intron | 45.0% |
| !! | GGATTTGGTGACAAAAGAGG+AGG | - | chr7.4:21808301-21808320 | MS.gene51874:intron | 45.0% |
| !! | GGTGGATTTGGTGACAAAAG+AGG | - | chr7.4:21808298-21808317 | MS.gene51874:intron | 45.0% |
| !! | TGACGTGAAGGAGTGTTGTT+AGG | + | chr7.4:21807948-21807967 | None:intergenic | 45.0% |
| !! | TGATGGGTTGAGAGTTGGTA+TGG | - | chr7.4:21808610-21808629 | MS.gene51874:intron | 45.0% |
| !! | TTGAGAGTTGGTATGGGATC+TGG | - | chr7.4:21808617-21808636 | MS.gene51874:intron | 45.0% |
| AACAGCGATTCCACCAAGTG+CGG | + | chr7.4:21807919-21807938 | None:intergenic | 50.0% | |
| ACCATGCAAGCAGTAAGGCA+AGG | - | chr7.4:21810109-21810128 | MS.gene51874:intron | 50.0% | |
| ACCTTGCCTTACTGCTTGCA+TGG | + | chr7.4:21810113-21810132 | None:intergenic | 50.0% | |
| AGAAGAGATTGCTCCACTCC+AGG | + | chr7.4:21809163-21809182 | None:intergenic | 50.0% | |
| ATCCTCTATGGCTTCTGCCA+TGG | - | chr7.4:21807893-21807912 | MS.gene51874:intron | 50.0% | |
| ATGCCACCATCAGCAATGAC+AGG | + | chr7.4:21809423-21809442 | None:intergenic | 50.0% | |
| ATGTGCAGACTGCAGAGAGT+TGG | + | chr7.4:21810152-21810171 | None:intergenic | 50.0% | |
| CACTGTCTCCGAATCCTCTA+TGG | - | chr7.4:21807881-21807900 | MS.gene51874:intron | 50.0% | |
| CGAGGGAACAAGATAAGGAG+AGG | - | chr7.4:21808411-21808430 | MS.gene51874:intron | 50.0% | |
| CGATTATATGGAGGCTCCAC+CGG | - | chr7.4:21808181-21808200 | MS.gene51874:intron | 50.0% | |
| CGGTGGAGCCTCCATATAAT+CGG | + | chr7.4:21808183-21808202 | None:intergenic | 50.0% | |
| CTTCTTAGCTGGTAGTCTCG+AGG | - | chr7.4:21809506-21809525 | MS.gene51874:intron | 50.0% | |
| GAAAGCTGGTGTGAATGCTG+TGG | - | chr7.4:21808448-21808467 | MS.gene51874:intron | 50.0% | |
| GAGGAAGATGAGGTCATCGT+AGG | + | chr7.4:21807763-21807782 | None:intergenic | 50.0% | |
| GATGAAGACGAGAATCCCCT+TGG | + | chr7.4:21810966-21810985 | None:intergenic | 50.0% | |
| GATTATATGGAGGCTCCACC+GGG | - | chr7.4:21808182-21808201 | MS.gene51874:intron | 50.0% | |
| GATTCGGAGACAGTGTCCAT+AGG | + | chr7.4:21807876-21807895 | None:intergenic | 50.0% | |
| GCGGACGGAGAAACAAAAAC+CGG | + | chr7.4:21808023-21808042 | None:intergenic | 50.0% | |
| GGAGTTCCTGTCATTGCTGA+TGG | - | chr7.4:21809414-21809433 | MS.gene51874:intron | 50.0% | |
| GGCAGAAGCCATAGAGGATT+CGG | + | chr7.4:21807892-21807911 | None:intergenic | 50.0% | |
| GGGTGTTAAGGCTAGAGGTA+TGG | - | chr7.4:21810188-21810207 | MS.gene51874:intron | 50.0% | |
| GTTCCTGTCATTGCTGATGG+TGG | - | chr7.4:21809417-21809436 | MS.gene51874:intron | 50.0% | |
| TCAGGGCCTTGAGCAATATC+TGG | + | chr7.4:21809324-21809343 | None:intergenic | 50.0% | |
| TCCATAGGAGAAGCGACGAA+GGG | + | chr7.4:21807861-21807880 | None:intergenic | 50.0% | |
| TCCCGGGGCTTATGTATATC+AGG | - | chr7.4:21809530-21809549 | MS.gene51874:intron | 50.0% | |
| TGCTTTGTCCAGGTTCGTAC+TGG | - | chr7.4:21811352-21811371 | MS.gene51874:CDS | 50.0% | |
| TGGGACGAGGGAACAAGATA+AGG | - | chr7.4:21808406-21808425 | MS.gene51874:intron | 50.0% | |
| TGTAGTGAGGGAGGAAGATG+AGG | + | chr7.4:21807773-21807792 | None:intergenic | 50.0% | |
| TTCGCAAGGTCAGAGTTCCA+CGG | + | chr7.4:21808215-21808234 | None:intergenic | 50.0% | |
| ! | ATCCAGGGTGTTAAGGCTAG+AGG | - | chr7.4:21810183-21810202 | MS.gene51874:intron | 50.0% |
| ! | CACGCCCTTGTCATTTCGAT+TGG | + | chr7.4:21808153-21808172 | None:intergenic | 50.0% |
| ! | CACGTACGGTTTGTTTGGAC+TGG | + | chr7.4:21808998-21809017 | None:intergenic | 50.0% |
| ! | GATGGTGGCATCTCAAACTC+TGG | - | chr7.4:21809432-21809451 | MS.gene51874:intron | 50.0% |
| ! | GCGGAGAAGCTTTTCAACAC+CGG | - | chr7.4:21807726-21807745 | MS.gene51874:CDS | 50.0% |
| !! | GGATGAAGAGGTGGTGGATT+TGG | - | chr7.4:21808286-21808305 | MS.gene51874:intron | 50.0% |
| !! | GGCAGTGATCAAAGGTACCT+CGG | - | chr7.4:21810004-21810023 | MS.gene51874:intron | 50.0% |
| !! | GGGAGCATCGACTGTTATGA+TGG | - | chr7.4:21809479-21809498 | MS.gene51874:intron | 50.0% |
| !! | GGTGTTGATGGGTTGAGAGT+TGG | - | chr7.4:21808605-21808624 | MS.gene51874:intron | 50.0% |
| !! | TACCTCTAGCCTTAACACCC+TGG | + | chr7.4:21810188-21810207 | None:intergenic | 50.0% |
| AACGGCTCCAACAACCCCTT+GGG | + | chr7.4:21810053-21810072 | None:intergenic | 55.0% | |
| AAGCGACGAAGGGAGTTGAG+AGG | + | chr7.4:21807851-21807870 | None:intergenic | 55.0% | |
| AATAAGCCGTGGGGCTTGTG+TGG | - | chr7.4:21809127-21809146 | MS.gene51874:CDS | 55.0% | |
| AATCGAAGACGGTTACGCGG+CGG | - | chr7.4:21807707-21807726 | MS.gene51874:CDS | 55.0% | |
| ACGATAGCAGCCTGACGTGA+AGG | + | chr7.4:21807960-21807979 | None:intergenic | 55.0% | |
| ACTCAGGAAGTTTGCGCGGT+TGG | - | chr7.4:21808653-21808672 | MS.gene51874:intron | 55.0% | |
| ACTCCTCCGCCAATCGAAGA+CGG | - | chr7.4:21807696-21807715 | MS.gene51874:CDS | 55.0% | |
| AGATTGCTCCACTCCAGGTC+AGG | + | chr7.4:21809158-21809177 | None:intergenic | 55.0% | |
| AGCGACGAAGGGAGTTGAGA+GGG | + | chr7.4:21807850-21807869 | None:intergenic | 55.0% | |
| CGAAGTCGATGTAGTGAGGG+AGG | + | chr7.4:21807782-21807801 | None:intergenic | 55.0% | |
| CGGCGAAGTCGATGTAGTGA+GGG | + | chr7.4:21807785-21807804 | None:intergenic | 55.0% | |
| CTCAGGAAGTTTGCGCGGTT+GGG | - | chr7.4:21808654-21808673 | MS.gene51874:intron | 55.0% | |
| GAGTTCCACGGTAGAGAACC+CGG | + | chr7.4:21808203-21808222 | None:intergenic | 55.0% | |
| GATCCTCCGGTCACCAACTT+CGG | + | chr7.4:21808347-21808366 | None:intergenic | 55.0% | |
| GATGTTACGACTGAGACGGG+AGG | + | chr7.4:21807826-21807845 | None:intergenic | 55.0% | |
| GATTGCTCCACTCCAGGTCA+GGG | + | chr7.4:21809157-21809176 | None:intergenic | 55.0% | |
| GCCAATCGAAGACGGTTACG+CGG | - | chr7.4:21807704-21807723 | MS.gene51874:CDS | 55.0% | |
| GCGTAACCGTCTTCGATTGG+CGG | + | chr7.4:21807705-21807724 | None:intergenic | 55.0% | |
| GGGGATGTTACGACTGAGAC+GGG | + | chr7.4:21807829-21807848 | None:intergenic | 55.0% | |
| GGGGGATGTTACGACTGAGA+CGG | + | chr7.4:21807830-21807849 | None:intergenic | 55.0% | |
| GGTGAAGGATGAAGAGGTGG+TGG | - | chr7.4:21808280-21808299 | MS.gene51874:intron | 55.0% | |
| GGTGAGAGGCTATCCGAAGT+TGG | - | chr7.4:21808331-21808350 | MS.gene51874:intron | 55.0% | |
| GTCCATAGGAGAAGCGACGA+AGG | + | chr7.4:21807862-21807881 | None:intergenic | 55.0% | |
| GTTCAGAGAGGATGGGCACA+CGG | + | chr7.4:21808001-21808020 | None:intergenic | 55.0% | |
| TAACCGTCTTCGATTGGCGG+AGG | + | chr7.4:21807702-21807721 | None:intergenic | 55.0% | |
| TAACGGCTCCAACAACCCCT+TGG | + | chr7.4:21810054-21810073 | None:intergenic | 55.0% | |
| TCCCTTCGTCGCTTCTCCTA+TGG | - | chr7.4:21807857-21807876 | MS.gene51874:intron | 55.0% | |
| TGTGCCCATCCTCTCTGAAC+CGG | - | chr7.4:21808001-21808020 | MS.gene51874:intron | 55.0% | |
| TTGTGTGGCATACCCTGACC+TGG | - | chr7.4:21809142-21809161 | MS.gene51874:CDS | 55.0% | |
| ! | ACTGGAGCAGCACAGGTTGA+AGG | - | chr7.4:21811370-21811389 | MS.gene51874:CDS | 55.0% |
| ! | GGAGAGGTCGACTTCATCAG+CGG | + | chr7.4:21807805-21807824 | None:intergenic | 55.0% |
| !! | GAAGTTGGTGACCGGAGGAT+CGG | - | chr7.4:21808346-21808365 | MS.gene51874:intron | 55.0% |
| !! | GGCTATCCGAAGTTGGTGAC+CGG | - | chr7.4:21808338-21808357 | MS.gene51874:intron | 55.0% |
| !! | TATCCGAAGTTGGTGACCGG+AGG | - | chr7.4:21808341-21808360 | MS.gene51874:intron | 55.0% |
| AGCGGATGGAGAGTGGATGG+TGG | - | chr7.4:21808373-21808392 | MS.gene51874:intron | 60.0% | |
| ATCCGCTCCAACCGATCCTC+CGG | + | chr7.4:21808360-21808379 | None:intergenic | 60.0% | |
| CACGTCAGGCTGCTATCGTC+CGG | - | chr7.4:21807961-21807980 | MS.gene51874:intron | 60.0% | |
| CGACGAAGGGAGTTGAGAGG+GGG | + | chr7.4:21807848-21807867 | None:intergenic | 60.0% | |
| CGGATGGAGAGTGGATGGTG+GGG | - | chr7.4:21808375-21808394 | MS.gene51874:intron | 60.0% | |
| GAGGAGGTTGAGAGGGTGAG+AGG | - | chr7.4:21808317-21808336 | MS.gene51874:intron | 60.0% | |
| GATTCCACCAAGTGCGGCCA+TGG | + | chr7.4:21807913-21807932 | None:intergenic | 60.0% | |
| GCCGCGTAACCGTCTTCGAT+TGG | + | chr7.4:21807708-21807727 | None:intergenic | 60.0% | |
| GCGACGAAGGGAGTTGAGAG+GGG | + | chr7.4:21807849-21807868 | None:intergenic | 60.0% | |
| GCGGATGGAGAGTGGATGGT+GGG | - | chr7.4:21808374-21808393 | MS.gene51874:intron | 60.0% | |
| GCGGCGAAGTCGATGTAGTG+AGG | + | chr7.4:21807786-21807805 | None:intergenic | 60.0% | |
| GGCCATGGCAGAAGCCATAG+AGG | + | chr7.4:21807898-21807917 | None:intergenic | 60.0% | |
| GGTATGCCACACAAGCCCCA+CGG | + | chr7.4:21809136-21809155 | None:intergenic | 60.0% | |
| GGTTCGTACTGGAGCAGCAC+AGG | - | chr7.4:21811363-21811382 | MS.gene51874:CDS | 60.0% | |
| TACGACTGAGACGGGAGGAG+AGG | + | chr7.4:21807821-21807840 | None:intergenic | 60.0% | |
| TGGAGCGGATGGAGAGTGGA+TGG | - | chr7.4:21808370-21808389 | MS.gene51874:intron | 60.0% | |
| TGGCATACCCTGACCTGGAG+TGG | - | chr7.4:21809147-21809166 | MS.gene51874:CDS | 60.0% | |
| TTCCACGGTAGAGAACCCGG+TGG | + | chr7.4:21808200-21808219 | None:intergenic | 60.0% | |
| ! | GGAGCAGCACAGGTTGAAGG+AGG | - | chr7.4:21811373-21811392 | MS.gene51874:CDS | 60.0% |
| ! | GGATGGAGAGTGGATGGTGG+GGG | - | chr7.4:21808376-21808395 | MS.gene51874:intron | 60.0% |
| ! | GTGCTGCTCCAGTACGAACC+TGG | + | chr7.4:21811363-21811382 | None:intergenic | 60.0% |
| ! | TTGGTGACCGGAGGATCGGT+TGG | - | chr7.4:21808350-21808369 | MS.gene51874:intron | 60.0% |
| AGAGAGGATGGGCACACGGC+GGG | + | chr7.4:21807997-21808016 | None:intergenic | 65.0% | |
| CAGAGAGGATGGGCACACGG+CGG | + | chr7.4:21807998-21808017 | None:intergenic | 65.0% | |
| CGGTTGGAGCGGATGGAGAG+TGG | - | chr7.4:21808366-21808385 | MS.gene51874:intron | 65.0% | |
| CTCCACCGGGTTCTCTACCG+TGG | - | chr7.4:21808195-21808214 | MS.gene51874:intron | 65.0% | |
| CTGGTAGTCTCGAGGCTCCC+GGG | - | chr7.4:21809514-21809533 | MS.gene51874:intron | 65.0% | |
| GAAGTTTGCGCGGTTGGGCG+TGG | - | chr7.4:21808659-21808678 | MS.gene51874:intron | 65.0% | |
| GACCGGAGGATCGGTTGGAG+CGG | - | chr7.4:21808355-21808374 | MS.gene51874:intron | 65.0% | |
| GCTGGTAGTCTCGAGGCTCC+CGG | - | chr7.4:21809513-21809532 | MS.gene51874:intron | 65.0% | |
| GCTTCTGCCATGGCCGCACT+TGG | - | chr7.4:21807903-21807922 | MS.gene51874:intron | 65.0% | |
| GGAGGATCGGTTGGAGCGGA+TGG | - | chr7.4:21808359-21808378 | MS.gene51874:intron | 65.0% | |
| TCTGCCATGGCCGCACTTGG+TGG | - | chr7.4:21807906-21807925 | MS.gene51874:intron | 65.0% | |
| TGGTAGTCTCGAGGCTCCCG+GGG | - | chr7.4:21809515-21809534 | MS.gene51874:intron | 65.0% | |
| !! | TGGAGAGTGGATGGTGGGGG+CGG | - | chr7.4:21808379-21808398 | MS.gene51874:intron | 65.0% |
| CACGGCGGGACTTAGCGGTC+CGG | + | chr7.4:21807983-21808002 | None:intergenic | 70.0% | |
| GGGCACACGGCGGGACTTAG+CGG | + | chr7.4:21807988-21808007 | None:intergenic | 70.0% | |
| TTGCGCGGTTGGGCGTGGTC+AGG | - | chr7.4:21808664-21808683 | MS.gene51874:intron | 70.0% | |
| !! | GGATGGTGGGGGCGGCGATT+GGG | - | chr7.4:21808387-21808406 | MS.gene51874:intron | 70.0% |
| !! | TGGATGGTGGGGGCGGCGAT+TGG | - | chr7.4:21808386-21808405 | MS.gene51874:intron | 70.0% |
| GGGGGCGGCGATTGGGACGA+GGG | - | chr7.4:21808394-21808413 | MS.gene51874:intron | 75.0% | |
| TGGGGGCGGCGATTGGGACG+AGG | - | chr7.4:21808393-21808412 | MS.gene51874:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 21807687 | 21811435 | 21807687 | ID=MS.gene51874 |
| chr7.4 | mRNA | 21807687 | 21811435 | 21807687 | ID=MS.gene51874.t1;Parent=MS.gene51874 |
| chr7.4 | exon | 21810437 | 21811435 | 21810437 | ID=MS.gene51874.t1.exon1;Parent=MS.gene51874.t1 |
| chr7.4 | CDS | 21810437 | 21811435 | 21810437 | ID=cds.MS.gene51874.t1;Parent=MS.gene51874.t1 |
| chr7.4 | exon | 21809571 | 21809750 | 21809571 | ID=MS.gene51874.t1.exon2;Parent=MS.gene51874.t1 |
| chr7.4 | CDS | 21809571 | 21809750 | 21809571 | ID=cds.MS.gene51874.t1;Parent=MS.gene51874.t1 |
| chr7.4 | exon | 21808918 | 21809175 | 21808918 | ID=MS.gene51874.t1.exon3;Parent=MS.gene51874.t1 |
| chr7.4 | CDS | 21808918 | 21809175 | 21808918 | ID=cds.MS.gene51874.t1;Parent=MS.gene51874.t1 |
| chr7.4 | exon | 21807687 | 21807758 | 21807687 | ID=MS.gene51874.t1.exon4;Parent=MS.gene51874.t1 |
| chr7.4 | CDS | 21807687 | 21807758 | 21807687 | ID=cds.MS.gene51874.t1;Parent=MS.gene51874.t1 |
| Gene Sequence |
| Protein sequence |
