AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52364

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52364.t1 MTR_3g074270 91.165 498 24 1 1 498 1 478 0.0 910
MS.gene52364.t1 MTR_3g074410 67.131 502 162 2 1 499 1 502 0.0 711
MS.gene52364.t1 MTR_3g074390 66.078 510 166 3 1 503 1 510 0.0 710
MS.gene52364.t1 MTR_3g008160 50.810 494 236 5 16 505 16 506 0.0 518
MS.gene52364.t1 MTR_5g006070 47.590 498 252 6 14 505 13 507 1.69e-176 506
MS.gene52364.t1 MTR_3g008170 49.307 505 248 6 5 504 4 505 1.83e-176 506
MS.gene52364.t1 MTR_3g074380 65.574 366 122 3 1 362 1 366 7.45e-175 496
MS.gene52364.t1 MTR_0204s0020 49.687 479 237 3 16 493 14 489 7.54e-173 496
MS.gene52364.t1 MTR_5g041550 50.196 510 248 4 1 505 1 509 5.38e-172 495
MS.gene52364.t1 MTR_7g091690 50.803 498 237 5 1 493 1 495 1.07e-170 491
MS.gene52364.t1 MTR_5g094760 49.509 509 245 5 1 502 1 504 1.19e-170 491
MS.gene52364.t1 MTR_4g116790 47.211 502 261 3 2 502 6 504 7.06e-170 490
MS.gene52364.t1 MTR_1g038630 48.780 492 249 2 16 505 16 506 2.52e-169 488
MS.gene52364.t1 MTR_0009s0370 49.087 493 245 4 18 505 16 507 2.58e-169 488
MS.gene52364.t1 MTR_0204s0020 49.061 479 237 4 16 493 14 486 8.69e-169 486
MS.gene52364.t1 MTR_1g104750 45.908 501 263 6 1 496 1 498 1.53e-168 485
MS.gene52364.t1 MTR_5g082540 47.515 503 259 3 1 500 1 501 2.67e-168 485
MS.gene52364.t1 MTR_0204s0040 46.386 498 263 3 3 499 9 503 1.24e-166 481
MS.gene52364.t1 MTR_3g093010 49.802 506 248 4 4 504 3 507 4.56e-166 479
MS.gene52364.t1 MTR_3g008160 50.217 460 222 5 50 505 1 457 1.69e-165 476
MS.gene52364.t1 MTR_1g104770 45.418 502 265 6 1 496 1 499 3.64e-165 477
MS.gene52364.t1 MTR_1g104780 46.863 510 263 6 1 505 1 507 4.01e-165 478
MS.gene52364.t1 MTR_4g116770 46.386 498 263 3 3 499 205 699 3.71e-164 481
MS.gene52364.t1 MTR_3g023480 47.658 491 251 4 18 503 16 505 7.39e-162 469
MS.gene52364.t1 MTR_3g074340 66.978 321 105 1 185 504 18 338 1.45e-160 459
MS.gene52364.t1 MTR_3g074320 66.667 321 106 1 185 504 18 338 5.49e-160 457
MS.gene52364.t1 MTR_8g102860 47.358 492 253 6 16 504 19 507 7.33e-159 461
MS.gene52364.t1 MTR_5g006070 46.537 462 238 6 50 505 1 459 7.80e-159 460
MS.gene52364.t1 MTR_4g091370 50.305 491 238 5 14 499 14 503 1.16e-158 461
MS.gene52364.t1 MTR_3g074370 66.355 321 107 1 185 504 18 338 1.45e-158 454
MS.gene52364.t1 MTR_6g087040 46.245 506 261 7 1 499 1 502 1.57e-156 455
MS.gene52364.t1 MTR_6g088375 46.245 506 261 7 1 499 1 502 1.57e-156 455
MS.gene52364.t1 MTR_3g007910 47.887 497 225 6 4 497 3 468 2.11e-155 451
MS.gene52364.t1 MTR_1g038600 46.735 490 244 3 16 505 16 488 2.36e-155 452
MS.gene52364.t1 MTR_4g090600 48.703 501 246 5 3 499 9 502 4.35e-149 436
MS.gene52364.t1 MTR_3g093060 48.330 449 225 4 50 492 1 448 2.56e-146 427
MS.gene52364.t1 MTR_3g074400 51.111 450 165 6 50 477 1 417 3.44e-145 423
MS.gene52364.t1 MTR_8g102860 46.725 458 238 6 50 504 1 455 3.07e-144 422
MS.gene52364.t1 MTR_4g116790 48.199 361 185 2 2 361 6 365 2.81e-120 358
MS.gene52364.t1 MTR_3g074330 67.089 158 45 1 1 151 1 158 9.85e-69 218
MS.gene52364.t1 MTR_3g074360 67.089 158 45 1 1 151 1 158 9.85e-69 218
MS.gene52364.t1 MTR_3g074310 66.456 158 46 1 1 151 1 158 5.23e-68 216
MS.gene52364.t1 MTR_6g088450 30.303 462 285 10 28 476 63 500 3.47e-56 196
MS.gene52364.t1 MTR_4g072030 30.738 488 287 12 27 490 31 491 1.99e-54 191
MS.gene52364.t1 MTR_8g103500 26.815 496 327 10 6 488 1 473 9.15e-53 186
MS.gene52364.t1 MTR_8g077890 29.124 491 290 10 28 489 24 485 2.23e-50 180
MS.gene52364.t1 MTR_2g013310 29.484 407 266 7 88 482 26 423 2.02e-49 176
MS.gene52364.t1 MTR_2g013310 29.484 407 266 7 88 482 99 496 5.78e-49 176
MS.gene52364.t1 MTR_4g069500 28.741 421 271 9 93 490 31 445 6.44e-49 175
MS.gene52364.t1 MTR_4g069500 28.741 421 271 9 93 490 81 495 1.38e-48 175
MS.gene52364.t1 MTR_7g082270 29.011 455 295 7 29 482 71 498 7.70e-48 173
MS.gene52364.t1 MTR_5g096000 51.955 179 68 2 4 182 3 163 9.14e-48 167
MS.gene52364.t1 MTR_5g096000 44.697 132 72 1 367 497 168 299 9.51e-28 113
MS.gene52364.t1 MTR_4g077740 28.782 476 301 10 22 482 44 496 1.14e-47 172
MS.gene52364.t1 MTR_6g018790 29.011 455 295 6 29 482 111 538 1.42e-47 173
MS.gene52364.t1 MTR_7g005910 27.975 479 316 9 29 503 39 492 3.67e-47 171
MS.gene52364.t1 MTR_3g116240 27.530 494 294 13 27 488 32 493 4.54e-47 171
MS.gene52364.t1 MTR_7g094450 29.602 402 270 4 82 482 80 469 2.27e-46 168
MS.gene52364.t1 MTR_7g446340 26.132 486 314 10 12 482 43 498 1.45e-45 167
MS.gene52364.t1 MTR_6g007340 26.132 486 314 10 12 482 43 498 1.45e-45 167
MS.gene52364.t1 MTR_1g116660 26.596 470 316 9 29 492 41 487 2.30e-45 166
MS.gene52364.t1 MTR_3g084110 26.181 508 339 12 7 505 8 488 7.06e-45 165
MS.gene52364.t1 MTR_5g075300 27.092 502 317 12 14 489 7 485 7.33e-45 165
MS.gene52364.t1 MTR_8g077310 27.612 402 283 3 82 482 87 481 4.70e-43 159
MS.gene52364.t1 MTR_8g077310 27.621 391 275 3 93 482 1 384 1.05e-42 156
MS.gene52364.t1 MTR_7g082270 29.323 399 255 6 29 427 71 442 4.87e-42 156
MS.gene52364.t1 MTR_8g077300 27.970 404 281 4 81 482 78 473 7.84e-41 153
MS.gene52364.t1 MTR_1g116650 24.949 489 320 10 12 489 63 515 9.18e-41 154
MS.gene52364.t1 MTR_7g094110 28.358 402 275 4 82 482 82 471 9.75e-41 153
MS.gene52364.t1 MTR_5g019870 26.465 495 302 14 27 489 18 482 6.26e-38 145
MS.gene52364.t1 MTR_5g020270 25.622 402 291 3 82 482 90 484 1.84e-37 144
MS.gene52364.t1 MTR_2g020710 25.373 402 286 6 83 482 1 390 2.36e-37 142
MS.gene52364.t1 MTR_5g020270 25.575 391 283 3 93 482 1 384 4.09e-37 141
MS.gene52364.t1 MTR_2g020710 25.248 404 288 6 81 482 88 479 4.85e-37 143
MS.gene52364.t1 MTR_3g080240 26.407 462 301 10 28 482 98 527 1.41e-36 142
MS.gene52364.t1 MTR_7g113970 26.098 410 276 8 81 482 101 491 5.35e-36 140
MS.gene52364.t1 MTR_2g049020 27.907 344 226 5 34 371 37 364 8.60e-36 140
MS.gene52364.t1 MTR_2g048720 30.341 323 202 5 34 351 37 341 1.09e-35 140
MS.gene52364.t1 MTR_4g013205 25.000 460 308 8 28 482 41 468 1.63e-35 138
MS.gene52364.t1 MTR_4g118610 25.485 412 277 7 81 482 91 482 2.15e-35 138
MS.gene52364.t1 MTR_7g113960 24.877 406 282 6 82 482 67 454 2.28e-35 138
MS.gene52364.t1 MTR_5g077580 23.464 537 296 11 34 482 37 546 5.93e-35 138
MS.gene52364.t1 MTR_1g022315 25.610 410 282 6 82 482 89 484 2.59e-34 135
MS.gene52364.t1 MTR_1g022315 25.564 399 274 6 93 482 1 385 2.97e-34 133
MS.gene52364.t1 MTR_7g094110 26.617 402 262 4 82 482 82 451 5.23e-34 134
MS.gene52364.t1 MTR_0064s0040 44.966 149 69 2 4 151 5 141 5.64e-34 125
MS.gene52364.t1 MTR_6g087910 26.055 403 275 8 87 482 96 482 5.98e-32 128
MS.gene52364.t1 MTR_4g064820 28.272 382 241 7 5 370 78 442 6.19e-32 128
MS.gene52364.t1 MTR_8g077310 27.972 286 198 3 81 365 86 364 9.93e-31 124
MS.gene52364.t1 MTR_5g020270 24.378 402 275 4 82 482 90 463 7.21e-30 122
MS.gene52364.t1 MTR_2g026160 27.778 360 231 6 34 383 38 378 9.02e-30 123
MS.gene52364.t1 MTR_1g038620 37.975 158 80 2 201 358 50 189 4.22e-28 110
MS.gene52364.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 7.39e-27 113
MS.gene52364.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.06e-26 112
MS.gene52364.t1 MTR_4g069500 26.774 310 200 8 202 490 3 306 1.20e-26 110
MS.gene52364.t1 MTR_2g020710 26.740 273 190 5 81 351 88 352 1.33e-26 111
MS.gene52364.t1 MTR_4g118610 25.073 343 227 7 81 413 91 413 5.17e-25 107
MS.gene52364.t1 MTR_7g113970 27.046 281 182 6 82 354 102 367 5.65e-25 107
MS.gene52364.t1 MTR_7g113960 25.455 275 188 4 82 351 67 329 4.30e-24 104
MS.gene52364.t1 MTR_1g114280 37.736 159 79 3 343 501 19 157 6.39e-24 98.6
MS.gene52364.t1 MTR_2g026140 26.031 388 246 8 3 380 4 360 3.61e-23 103
MS.gene52364.t1 MTR_5g024740 27.241 290 178 8 21 306 2 262 4.05e-20 94.4
MS.gene52364.t1 MTR_3g116060 33.929 168 105 3 94 257 56 221 2.20e-19 92.0
MS.gene52364.t1 MTR_5g044910 29.885 174 116 3 83 252 47 218 9.71e-19 90.1
MS.gene52364.t1 MTR_8g073100 30.899 178 121 2 77 252 41 218 6.63e-18 87.4
MS.gene52364.t1 MTR_3g118530 31.138 167 111 3 94 257 58 223 8.55e-16 80.9
MS.gene52364.t1 MTR_3g118530 31.138 167 111 3 94 257 58 223 2.67e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52364.t1 AT1G34580 60.159 502 195 3 1 497 1 502 0.0 626
MS.gene52364.t1 AT1G34580 59.211 456 182 2 50 501 1 456 0.0 563
MS.gene52364.t1 AT5G26340 49.203 502 248 5 1 497 1 500 0.0 519
MS.gene52364.t1 AT3G19930 50.400 500 244 3 3 499 2 500 2.03e-178 511
MS.gene52364.t1 AT3G19930 50.400 500 244 3 3 499 2 500 2.03e-178 511
MS.gene52364.t1 AT4G21480 52.567 487 228 3 14 498 14 499 2.69e-176 505
MS.gene52364.t1 AT1G11260 50.000 516 246 5 1 505 1 515 1.72e-175 504
MS.gene52364.t1 AT3G19940 50.311 483 237 3 19 499 21 502 2.21e-174 501
MS.gene52364.t1 AT1G50310 49.174 484 242 4 19 499 21 503 1.83e-171 494
MS.gene52364.t1 AT4G02050 47.896 499 250 5 1 493 1 495 2.96e-170 490
MS.gene52364.t1 AT4G02050 47.896 499 250 5 1 493 1 495 2.96e-170 490
MS.gene52364.t1 AT5G61520 47.826 483 242 6 18 493 19 498 5.91e-165 477
MS.gene52364.t1 AT5G23270 48.400 500 252 4 1 495 1 499 9.43e-165 476
MS.gene52364.t1 AT5G26250 46.774 496 255 5 16 505 15 507 1.09e-159 463
MS.gene52364.t1 AT3G05960 46.545 492 256 5 7 496 7 493 9.41e-158 458
MS.gene52364.t1 AT1G77210 43.898 508 275 8 1 502 1 504 2.06e-150 439
MS.gene52364.t1 AT1G77210 43.898 508 275 8 1 502 1 504 2.06e-150 439
MS.gene52364.t1 AT5G61520 46.903 452 230 6 49 493 2 450 2.76e-150 438
MS.gene52364.t1 AT1G07340 41.717 501 284 5 1 497 1 497 8.34e-139 410
MS.gene52364.t1 AT1G50310 46.724 351 184 3 151 499 11 360 5.59e-115 344
MS.gene52364.t1 AT1G77210 42.373 354 198 6 151 502 6 355 2.89e-99 303
MS.gene52364.t1 AT4G36670 27.921 505 303 12 27 505 21 490 3.51e-52 184
MS.gene52364.t1 AT3G18830 26.016 492 312 11 27 493 40 504 4.14e-50 180
MS.gene52364.t1 AT2G18480 31.002 429 253 10 88 486 68 483 1.38e-48 175
MS.gene52364.t1 AT2G16130 27.066 484 311 10 27 489 30 492 2.77e-48 174
MS.gene52364.t1 AT5G16150 29.512 471 298 7 16 482 98 538 5.41e-48 174
MS.gene52364.t1 AT5G16150 29.512 471 298 7 16 482 98 538 5.41e-48 174
MS.gene52364.t1 AT5G16150 29.512 471 298 7 16 482 98 538 5.41e-48 174
MS.gene52364.t1 AT2G16120 26.653 484 313 10 27 489 30 492 1.51e-47 172
MS.gene52364.t1 AT5G59250 29.757 494 304 9 6 482 85 552 5.56e-45 166
MS.gene52364.t1 AT2G48020 27.833 406 280 5 81 485 67 460 6.36e-44 161
MS.gene52364.t1 AT2G48020 27.833 406 280 5 81 485 67 460 6.36e-44 161
MS.gene52364.t1 AT2G20780 25.000 484 320 10 12 482 43 496 1.81e-43 161
MS.gene52364.t1 AT1G75220 27.518 407 285 4 82 486 88 486 4.22e-43 160
MS.gene52364.t1 AT2G20780 26.471 408 277 7 87 482 42 438 6.50e-43 159
MS.gene52364.t1 AT3G05160 26.860 484 318 7 1 482 1 450 1.88e-42 157
MS.gene52364.t1 AT3G05160 28.250 400 274 4 84 482 14 401 1.64e-41 154
MS.gene52364.t1 AT3G05160 28.250 400 274 4 84 482 14 401 1.64e-41 154
MS.gene52364.t1 AT5G17010 26.819 481 316 7 16 482 40 498 3.23e-41 155
MS.gene52364.t1 AT5G17010 26.819 481 316 7 16 482 40 498 3.23e-41 155
MS.gene52364.t1 AT5G17010 26.819 481 316 7 16 482 40 498 3.23e-41 155
MS.gene52364.t1 AT1G19450 27.792 403 281 4 82 482 89 483 8.49e-41 153
MS.gene52364.t1 AT3G05165 26.226 469 312 6 16 482 23 459 8.93e-41 153
MS.gene52364.t1 AT3G05165 26.226 469 312 6 16 482 23 459 8.93e-41 153
MS.gene52364.t1 AT3G05165 26.226 469 312 6 16 482 23 459 8.93e-41 153
MS.gene52364.t1 AT1G08930 26.059 472 313 8 14 482 49 487 1.35e-40 153
MS.gene52364.t1 AT1G08930 26.059 472 313 8 14 482 49 487 1.35e-40 153
MS.gene52364.t1 AT3G05150 28.087 413 263 8 82 482 75 465 1.56e-39 149
MS.gene52364.t1 AT3G05150 28.087 413 263 8 82 482 75 465 1.56e-39 149
MS.gene52364.t1 AT3G05150 28.087 413 263 8 82 482 75 465 1.79e-39 149
MS.gene52364.t1 AT1G54730 27.586 406 273 5 82 482 72 461 1.89e-39 149
MS.gene52364.t1 AT1G08900 28.960 404 270 7 82 482 23 412 4.24e-39 147
MS.gene52364.t1 AT5G27350 25.726 482 322 7 4 482 12 460 4.33e-39 148
MS.gene52364.t1 AT1G08900 28.960 404 270 7 82 482 65 454 7.35e-39 147
MS.gene52364.t1 AT1G08900 28.960 404 270 7 82 482 65 454 7.35e-39 147
MS.gene52364.t1 AT1G08900 28.960 404 270 7 82 482 57 446 7.49e-39 147
MS.gene52364.t1 AT4G04760 27.913 412 281 6 82 489 12 411 1.04e-38 146
MS.gene52364.t1 AT4G04760 28.117 409 278 6 82 486 71 467 2.60e-38 146
MS.gene52364.t1 AT5G18840 25.610 410 279 5 81 482 83 474 5.42e-38 145
MS.gene52364.t1 AT3G05400 26.485 404 282 5 81 482 65 455 9.49e-38 144
MS.gene52364.t1 AT1G79820 26.739 460 300 8 28 482 59 486 9.60e-38 145
MS.gene52364.t1 AT1G79820 26.739 460 300 8 28 482 59 486 9.60e-38 145
MS.gene52364.t1 AT2G43330 24.638 483 341 8 27 505 35 498 1.09e-37 145
MS.gene52364.t1 AT3G03090 30.583 412 261 7 85 482 98 498 1.11e-37 145
MS.gene52364.t1 AT5G27360 24.426 479 328 7 6 482 18 464 1.39e-37 144
MS.gene52364.t1 AT4G04750 27.518 407 274 6 82 482 76 467 1.56e-37 144
MS.gene52364.t1 AT4G04750 27.518 407 274 6 82 482 76 467 1.56e-37 144
MS.gene52364.t1 AT5G27360 24.426 479 328 7 6 482 66 512 1.98e-37 144
MS.gene52364.t1 AT4G04750 27.451 408 275 6 81 482 119 511 2.14e-37 144
MS.gene52364.t1 AT1G67300 26.190 462 303 8 28 482 56 486 3.52e-37 143
MS.gene52364.t1 AT3G05165 26.168 428 282 6 16 441 23 418 7.74e-37 142
MS.gene52364.t1 AT3G05165 26.168 428 282 6 16 441 23 418 7.74e-37 142
MS.gene52364.t1 AT1G67300 26.923 416 260 8 28 434 56 436 1.29e-36 141
MS.gene52364.t1 AT1G67300 26.923 416 260 8 28 434 56 436 1.29e-36 141
MS.gene52364.t1 AT3G05165 26.714 423 275 7 5 425 13 402 1.53e-36 142
MS.gene52364.t1 AT3G05155 24.622 463 311 9 23 482 27 454 5.06e-36 139
MS.gene52364.t1 AT1G67300 26.496 468 293 10 28 482 56 485 5.39e-36 140
MS.gene52364.t1 AT1G67300 26.496 468 293 10 28 482 56 485 5.39e-36 140
MS.gene52364.t1 AT1G08900 29.024 379 246 8 82 450 65 430 4.03e-35 136
MS.gene52364.t1 AT4G04760 27.873 409 276 6 82 486 71 464 1.11e-34 136
MS.gene52364.t1 AT1G54730 27.671 365 243 5 82 441 72 420 1.15e-34 135
MS.gene52364.t1 AT3G05400 27.419 372 255 5 113 482 77 435 1.40e-34 135
MS.gene52364.t1 AT1G05030 24.891 458 311 9 29 482 85 513 1.95e-34 136
MS.gene52364.t1 AT1G08890 24.691 486 332 9 1 482 1 456 3.04e-34 134
MS.gene52364.t1 AT1G05030 25.750 400 282 6 87 482 73 461 3.96e-34 134
MS.gene52364.t1 AT1G67300 26.406 409 257 8 28 427 56 429 4.24e-34 134
MS.gene52364.t1 AT1G67300 26.406 409 257 8 28 427 56 429 4.24e-34 134
MS.gene52364.t1 AT1G54730 25.485 412 253 5 82 482 72 440 4.65e-34 134
MS.gene52364.t1 AT1G30220 29.429 333 211 6 34 359 39 354 7.21e-34 135
MS.gene52364.t1 AT4G16480 28.346 381 245 6 3 371 4 368 1.78e-33 134
MS.gene52364.t1 AT4G16480 28.346 381 245 6 3 371 4 368 1.78e-33 134
MS.gene52364.t1 AT4G16480 28.346 381 245 6 3 371 4 368 1.78e-33 134
MS.gene52364.t1 AT1G79820 25.735 408 271 6 28 433 59 436 3.11e-33 131
MS.gene52364.t1 AT5G27360 26.404 356 247 5 129 482 18 360 3.26e-32 127
MS.gene52364.t1 AT5G27360 26.404 356 247 5 129 482 18 360 3.26e-32 127
MS.gene52364.t1 AT1G08920 24.570 407 291 6 82 482 72 468 8.02e-30 122
MS.gene52364.t1 AT2G48020 27.719 285 197 3 82 365 68 344 1.96e-29 119
MS.gene52364.t1 AT1G54730 25.337 371 223 5 82 441 72 399 2.74e-29 119
MS.gene52364.t1 AT2G35740 27.378 347 227 5 34 371 37 367 3.86e-29 121
MS.gene52364.t1 AT1G54730 27.300 337 224 5 82 413 72 392 4.05e-29 119
MS.gene52364.t1 AT1G54730 27.300 337 224 5 82 413 72 392 4.05e-29 119
MS.gene52364.t1 AT1G08920 24.877 406 284 7 82 482 72 461 4.80e-29 120
MS.gene52364.t1 AT2G48020 27.798 277 191 3 81 356 67 335 5.97e-29 117
MS.gene52364.t1 AT1G54730 28.000 275 181 4 82 351 72 334 6.33e-27 111
MS.gene52364.t1 AT5G27360 23.706 367 248 6 6 369 18 355 5.26e-26 110
MS.gene52364.t1 AT1G54730 27.309 249 167 3 82 325 72 311 2.25e-25 107
MS.gene52364.t1 AT1G54730 27.309 249 167 3 82 325 72 311 2.25e-25 107
MS.gene52364.t1 AT1G08920 24.642 349 242 7 82 425 72 404 4.59e-25 108
MS.gene52364.t1 AT1G54730 27.309 249 167 3 82 325 72 311 4.65e-25 107
MS.gene52364.t1 AT3G05155 23.867 331 219 7 23 351 27 326 2.51e-24 103
MS.gene52364.t1 AT3G20460 23.573 403 295 5 81 482 92 482 2.64e-24 106
MS.gene52364.t1 AT1G79820 23.362 458 270 6 28 482 59 438 3.31e-24 105
MS.gene52364.t1 AT5G17010 24.274 482 267 11 16 482 37 435 7.06e-24 104
MS.gene52364.t1 AT3G51490 30.544 239 145 7 22 257 3 223 1.74e-21 98.6
MS.gene52364.t1 AT3G51490 30.544 239 145 7 22 257 3 223 2.11e-21 98.6
MS.gene52364.t1 AT3G51490 32.370 173 114 3 87 257 2 173 3.56e-20 94.4
MS.gene52364.t1 AT1G79820 24.377 361 209 5 125 482 77 376 1.41e-19 90.9
MS.gene52364.t1 AT1G20840 31.628 215 132 5 75 277 30 241 1.95e-18 89.4
MS.gene52364.t1 AT1G20840 31.628 215 132 5 75 277 30 241 1.95e-18 89.4
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.53e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.53e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.53e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.53e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.53e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.53e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.53e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.55e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.55e-18 89.0
MS.gene52364.t1 AT4G35300 32.948 173 113 3 87 257 52 223 2.55e-18 89.0

Find 97 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATATGACCTTGGAATTTC+AGG 0.170370 3.1:+60858024 MS.gene52364:CDS
CTTGTGGGTGGTGCCATTAC+TGG 0.172040 3.1:+60858456 MS.gene52364:CDS
AATATTGCTATGCTCATTAT+TGG 0.232942 3.1:+60858489 MS.gene52364:CDS
CTTAATGCTCCTCGCCATTT+TGG 0.247223 3.1:-60858905 None:intergenic
AAATGAAGTCCTTTGGTTTC+AGG 0.252457 3.1:-60859982 None:intergenic
CTTTCTTGTTCCATGGTACT+TGG 0.261521 3.1:+60859923 MS.gene52364:CDS
CGGAAATTGCTCCACCAAAA+TGG 0.280129 3.1:+60858891 MS.gene52364:CDS
TGGTGTGTCGTATATAATTA+AGG 0.283943 3.1:-60859065 None:intergenic
GCAGCCTTCTCAAGGACTTC+AGG 0.312481 3.1:-60858273 None:intergenic
ATGTTATGTCACTTGAAGTA+TGG 0.329171 3.1:+60859898 MS.gene52364:CDS
TATTGGCGCTACTACGTTAA+AGG 0.334241 3.1:+60860039 MS.gene52364:CDS
TTACTTCTCGGCTTTGGAAT+TGG 0.340499 3.1:+60858516 MS.gene52364:CDS
AGTGTCTACTCTGCAGGTTT+TGG 0.343218 3.1:+60859742 MS.gene52364:CDS
CAAACCCAATCGATACAAAA+AGG 0.344412 3.1:-60859336 None:intergenic
TGAAACCAAAGGACTTCATT+TGG 0.348457 3.1:+60859984 MS.gene52364:CDS
CGTAGAAACACCATCATGTT+GGG 0.353809 3.1:+60858420 MS.gene52364:CDS
GGTCGATTACTTCTCGGCTT+TGG 0.353860 3.1:+60858510 MS.gene52364:CDS
GGCTACTCCATTGTACCTTT+CGG 0.362825 3.1:+60858871 MS.gene52364:intron
CTTCTCAACCATTGTTGATC+GGG 0.374414 3.1:+60859423 MS.gene52364:CDS
CCTTTGAAAATCAGAACAAC+TGG 0.375616 3.1:+60859811 MS.gene52364:CDS
ATTATTGGTCGATTACTTCT+CGG 0.379515 3.1:+60858504 MS.gene52364:CDS
ACAACTCACGGGGATCAATA+TGG 0.380415 3.1:+60859294 MS.gene52364:CDS
CCACGCTCCACCAAACTGTT+TGG 0.383713 3.1:-60859085 None:intergenic
TTGCTCTCAACATCCACTTC+TGG 0.383843 3.1:-60857943 None:intergenic
TGGGGATGGCGAATCTCTCT+TGG 0.392847 3.1:+60859004 MS.gene52364:CDS
TGAATCCAAATGAAGTCCTT+TGG 0.395713 3.1:-60859989 None:intergenic
TGTCGCCGCAAAACACCCTT+GGG 0.399918 3.1:+60858985 MS.gene52364:CDS
TGGATTCAATCTATGACATA+TGG 0.404244 3.1:+60860004 MS.gene52364:CDS
TCGATATTGTCTCTCCAATA+TGG 0.407944 3.1:-60859233 None:intergenic
TGTGTTGTCTCAGACATTCA+TGG 0.408561 3.1:+60859873 MS.gene52364:CDS
TTGCTTGGCAACATTATACT+TGG 0.420380 3.1:+60859373 MS.gene52364:CDS
ACGTCGTCACTGTATCTAGC+TGG 0.421443 3.1:+60858351 MS.gene52364:CDS
TATGGTTCTTTCTTGTTCCA+TGG 0.424933 3.1:+60859916 MS.gene52364:CDS
ATACGACACACCAAACAGTT+TGG 0.446900 3.1:+60859075 MS.gene52364:CDS
CTTGGAATTATCCACAATAG+AGG 0.466419 3.1:-60859778 None:intergenic
GCGACTGGTGTTCACGGAAC+AGG 0.469212 3.1:+60859676 MS.gene52364:CDS
CGAAGAGTCTTGTTCATCAT+AGG 0.469654 3.1:+60859451 MS.gene52364:CDS
TCTTCTCAACCATTGTTGAT+CGG 0.472011 3.1:+60859422 MS.gene52364:CDS
TCAACCATTGTTGATCGGGT+TGG 0.475506 3.1:+60859427 MS.gene52364:CDS
TTGTCGCCGCAAAACACCCT+TGG 0.481968 3.1:+60858984 MS.gene52364:CDS
TTGATGAGTGTCTACTCTGC+AGG 0.483118 3.1:+60859736 MS.gene52364:CDS
GGTAGCATATCAAAGGGAAA+TGG 0.489620 3.1:+60859697 MS.gene52364:CDS
TCTAACAAGTTCTTCTAACT+CGG 0.490740 3.1:-60859167 None:intergenic
TATGGTGTAAACACTGGTAT+TGG 0.490926 3.1:+60860022 MS.gene52364:CDS
GGTCATGGGGTCCTCTATTG+TGG 0.495738 3.1:+60859767 MS.gene52364:CDS
TGCATTGTTGCAGCATCTAG+TGG 0.496424 3.1:+60857991 MS.gene52364:CDS
CCGATAGTGATCAATGCTGC+TGG 0.500955 3.1:-60859040 None:intergenic
GGTCACCAAGCAGCTTTGCT+TGG 0.501441 3.1:+60859358 MS.gene52364:CDS
GCAAGAAGAGTATAATAAAG+AGG 0.511393 3.1:-60859960 None:intergenic
GCAATGGCGACTGGTGTTCA+CGG 0.513386 3.1:+60859670 MS.gene52364:CDS
CAAAGCAGACACACCAGAAG+TGG 0.514148 3.1:+60857930 MS.gene52364:CDS
GGTATCATCTTTCTTGTGGG+TGG 0.517222 3.1:+60858444 MS.gene52364:CDS
CTTTCCTGAAGTCCTTGAGA+AGG 0.524113 3.1:+60858269 MS.gene52364:CDS
CATAGAAGGTTCAACATGGC+TGG 0.524744 3.1:+60857898 None:intergenic
CTAACAAGTTCTTCTAACTC+GGG 0.526141 3.1:-60859166 None:intergenic
CGGAACAGGTAGCATATCAA+AGG 0.537293 3.1:+60859690 MS.gene52364:CDS
ATTGTGATGGCAATGGCGAC+TGG 0.537992 3.1:+60859661 MS.gene52364:CDS
CGACACACCAAACAGTTTGG+TGG 0.546423 3.1:+60859078 MS.gene52364:CDS
CCAGCAGCATTGATCACTAT+CGG 0.547786 3.1:+60859040 MS.gene52364:CDS
CCGCAAAACACCCTTGGGGA+TGG 0.552796 3.1:+60858990 MS.gene52364:CDS
GAGACAATATCGACCTCACT+TGG 0.559094 3.1:+60859243 MS.gene52364:CDS
CCAAACAGTTTGGTGGAGCG+TGG 0.560048 3.1:+60859085 MS.gene52364:CDS
CCTTGAGAAGGCTGCAAAAG+CGG 0.563843 3.1:+60858281 MS.gene52364:CDS
AGGTTCAACATGGCTGGTGG+AGG 0.564731 3.1:+60857904 None:intergenic
CAAGAAGAGTATAATAAAGA+GGG 0.565630 3.1:-60859959 None:intergenic
GATCAATGCTGCTGGAACCA+CGG 0.567606 3.1:-60859032 None:intergenic
CGTCGTCACTGTATCTAGCT+GGG 0.570494 3.1:+60858352 MS.gene52364:CDS
ACGTAGAAACACCATCATGT+TGG 0.585374 3.1:+60858419 MS.gene52364:CDS
GGAACAGGTAGCATATCAAA+GGG 0.590863 3.1:+60859691 MS.gene52364:CDS
AGAGAGATTCGCCATCCCCA+AGG 0.594124 3.1:-60859001 None:intergenic
AGAAGGTTCAACATGGCTGG+TGG 0.594456 3.1:+60857901 None:intergenic
TAGTCGAATCACATCCACAC+TGG 0.602221 3.1:+60858395 MS.gene52364:CDS
AAAGCTTTGCATAAAATCAG+AGG 0.605462 3.1:+60859127 MS.gene52364:CDS
GCAATTTCCGAAAGGTACAA+TGG 0.605466 3.1:-60858878 None:intergenic
AGTCGAATCACATCCACACT+GGG 0.608510 3.1:+60858396 MS.gene52364:CDS
GGCGAGGAGCATTAAGCACA+TGG 0.611189 3.1:+60858912 MS.gene52364:CDS
AATCTCTCTTGGCTTAGCCG+TGG 0.614280 3.1:+60859015 MS.gene52364:CDS
CTCTTCTTGCCTGAAACCAA+AGG 0.616625 3.1:+60859973 MS.gene52364:CDS
GAGAGATTCGCCATCCCCAA+GGG 0.619261 3.1:-60859000 None:intergenic
TGTTGCCAAGCAAAGCTGCT+TGG 0.620105 3.1:-60859363 None:intergenic
ATGACATATGGTGTAAACAC+TGG 0.624663 3.1:+60860016 MS.gene52364:CDS
AGAGTCTTGTTCATCATAGG+TGG 0.627266 3.1:+60859454 MS.gene52364:CDS
TTGGTGGAGCAATTTCCGAA+AGG 0.634951 3.1:-60858886 None:intergenic
CAAACAGTTTGGTGGAGCGT+GGG 0.635003 3.1:+60859086 MS.gene52364:CDS
GTAGAAACACCATCATGTTG+GGG 0.637596 3.1:+60858421 MS.gene52364:CDS
TCGACCAACCCGATCAACAA+TGG 0.638791 3.1:-60859431 None:intergenic
TGACAACAATCCAAGTACCA+TGG 0.646403 3.1:-60859933 None:intergenic
GCAACTGCTATCACCAAGTG+AGG 0.648762 3.1:-60859256 None:intergenic
GTGGGTGGTGCCATTACTGG+AGG 0.653067 3.1:+60858459 MS.gene52364:CDS
TATTGCTATGAAGATTGCGG+TGG 0.662302 3.1:+60859636 MS.gene52364:intron
GGTGGCTATTGTGATGGCAA+TGG 0.669652 3.1:+60859654 MS.gene52364:CDS
GATTGCGGTGGCTATTGTGA+TGG 0.674554 3.1:+60859648 MS.gene52364:intron
ATTGCTCCACCAAAATGGCG+AGG 0.677731 3.1:+60858896 MS.gene52364:CDS
TAGAAACACCATCATGTTGG+GGG 0.693319 3.1:+60858422 MS.gene52364:CDS
GGTGTTTCTACGTCCCAGTG+TGG 0.701991 3.1:-60858409 None:intergenic
AGAAACACCATCATGTTGGG+GGG 0.714656 3.1:+60858423 MS.gene52364:CDS
GTCGCCGCAAAACACCCTTG+GGG 0.722403 3.1:+60858986 MS.gene52364:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAATCATAAAATATTACA+CGG - chr3.1:60858565-60858584 None:intergenic 15.0%
!! AGAATTAAAGATAGAAATCT+AGG - chr3.1:60859517-60859536 None:intergenic 20.0%
!!! TACATTTTGAAGATTCAAAA+TGG - chr3.1:60858590-60858609 None:intergenic 20.0%
!!! TTTCAATTTTTTATGCAAGT+TGG + chr3.1:60858935-60858954 MS.gene52364:CDS 20.0%
! AATATTGCTATGCTCATTAT+TGG + chr3.1:60858489-60858508 MS.gene52364:CDS 25.0%
! ATCAATTCAATTGATGAAAC+TGG + chr3.1:60858696-60858715 MS.gene52364:intron 25.0%
! ATTTCCATCAAGAATTGAAT+TGG - chr3.1:60858199-60858218 None:intergenic 25.0%
! CAATCAACATACTTCAATAA+TGG - chr3.1:60858845-60858864 None:intergenic 25.0%
! GATGGAAATGTTAAAATTTC+AGG + chr3.1:60858210-60858229 MS.gene52364:intron 25.0%
! TACGAATCAACAAATTAGTT+TGG + chr3.1:60858637-60858656 MS.gene52364:intron 25.0%
! TGACAAACAACTAAATTGAT+TGG - chr3.1:60858676-60858695 None:intergenic 25.0%
! TTCAAAGGAAAAATTTCACT+TGG - chr3.1:60859799-60859818 None:intergenic 25.0%
!! ATTTTCGTTGAGATAATTGT+AGG + chr3.1:60858152-60858171 MS.gene52364:intron 25.0%
!! CAAGAAGAGTATAATAAAGA+GGG - chr3.1:60859962-60859981 None:intergenic 25.0%
!! GAAGTATGTTGATTGATTTA+AGG + chr3.1:60858850-60858869 MS.gene52364:intron 25.0%
!! GAGATAATTGTAGGTTTTTA+AGG + chr3.1:60858161-60858180 MS.gene52364:intron 25.0%
!! TATATACTTGATGCTTTAGA+AGG - chr3.1:60858095-60858114 None:intergenic 25.0%
!!! AATGTAGAATTTTGACAAGT+AGG + chr3.1:60858604-60858623 MS.gene52364:intron 25.0%
!!! ATATACTTGATGCTTTAGAA+GGG - chr3.1:60858094-60858113 None:intergenic 25.0%
AAAAAGAACCTGAAATTCCA+AGG - chr3.1:60858035-60858054 None:intergenic 30.0%
AAAGCTTTGCATAAAATCAG+AGG + chr3.1:60859127-60859146 MS.gene52364:CDS 30.0%
ATCTATTGCTATGAAGATTG+CGG + chr3.1:60859633-60859652 MS.gene52364:intron 30.0%
ATTATTGGTCGATTACTTCT+CGG + chr3.1:60858504-60858523 MS.gene52364:CDS 30.0%
ATTCAATTGATGAAACTGGA+TGG + chr3.1:60858700-60858719 MS.gene52364:intron 30.0%
CTAACCAATTCAATTCTTGA+TGG + chr3.1:60858192-60858211 MS.gene52364:intron 30.0%
GGAAATGTTAAAATTTCAGG+AGG + chr3.1:60858213-60858232 MS.gene52364:intron 30.0%
TCTAACAAGTTCTTCTAACT+CGG - chr3.1:60859170-60859189 None:intergenic 30.0%
TGGATTCAATCTATGACATA+TGG + chr3.1:60860004-60860023 MS.gene52364:CDS 30.0%
TGGTGTGTCGTATATAATTA+AGG - chr3.1:60859068-60859087 None:intergenic 30.0%
! ATGTTATGTCACTTGAAGTA+TGG + chr3.1:60859898-60859917 MS.gene52364:CDS 30.0%
! GATTTTATGCAAAGCTTTTC+TGG - chr3.1:60859125-60859144 None:intergenic 30.0%
! GCAAGAAGAGTATAATAAAG+AGG - chr3.1:60859963-60859982 None:intergenic 30.0%
!! TATACTTGATGCTTTAGAAG+GGG - chr3.1:60858093-60858112 None:intergenic 30.0%
!!! CTAACCTTTTTGTATCGATT+GGG + chr3.1:60859332-60859351 MS.gene52364:CDS 30.0%
ATGACATATGGTGTAAACAC+TGG + chr3.1:60860016-60860035 MS.gene52364:CDS 35.0%
CAAACCCAATCGATACAAAA+AGG - chr3.1:60859339-60859358 None:intergenic 35.0%
CCAATCGATACAAAAAGGTT+AGG - chr3.1:60859334-60859353 None:intergenic 35.0%
CTAACAAGTTCTTCTAACTC+GGG - chr3.1:60859169-60859188 None:intergenic 35.0%
CTCTCCAATATGGTCAAAAA+AGG - chr3.1:60859226-60859245 None:intergenic 35.0%
CTTGGAATTATCCACAATAG+AGG - chr3.1:60859781-60859800 None:intergenic 35.0%
TATGGTGTAAACACTGGTAT+TGG + chr3.1:60860022-60860041 MS.gene52364:CDS 35.0%
TATGGTTCTTTCTTGTTCCA+TGG + chr3.1:60859916-60859935 MS.gene52364:CDS 35.0%
TCGATATTGTCTCTCCAATA+TGG - chr3.1:60859236-60859255 None:intergenic 35.0%
TCTTCTCAACCATTGTTGAT+CGG + chr3.1:60859422-60859441 MS.gene52364:CDS 35.0%
TGAAACCAAAGGACTTCATT+TGG + chr3.1:60859984-60860003 MS.gene52364:CDS 35.0%
TGAATCCAAATGAAGTCCTT+TGG - chr3.1:60859992-60860011 None:intergenic 35.0%
TTGCTTGGCAACATTATACT+TGG + chr3.1:60859373-60859392 MS.gene52364:CDS 35.0%
! AAATGAAGTCCTTTGGTTTC+AGG - chr3.1:60859985-60860004 None:intergenic 35.0%
! CCAGTTGTTCTGATTTTCAA+AGG - chr3.1:60859814-60859833 None:intergenic 35.0%
! CCTTTGAAAATCAGAACAAC+TGG + chr3.1:60859811-60859830 MS.gene52364:CDS 35.0%
! CTTCAGGAAAGAATTTTTCG+AGG - chr3.1:60858260-60858279 None:intergenic 35.0%
!! CCTAACCTTTTTGTATCGAT+TGG + chr3.1:60859331-60859350 MS.gene52364:CDS 35.0%
!! CTCATTTTTGGATATGACCT+TGG + chr3.1:60858015-60858034 MS.gene52364:CDS 35.0%
!! TTTTATGCAAGTTGGCGTTT+TGG + chr3.1:60858943-60858962 MS.gene52364:CDS 35.0%
!!! AGAGCCTTTTTTGACCATAT+TGG + chr3.1:60859219-60859238 MS.gene52364:CDS 35.0%
!!! CTTTTTGTATCGATTGGGTT+TGG + chr3.1:60859337-60859356 MS.gene52364:CDS 35.0%
!!! GGAAAGAATTTTTCGAGGAA+TGG - chr3.1:60858255-60858274 None:intergenic 35.0%
ACGTAGAAACACCATCATGT+TGG + chr3.1:60858419-60858438 MS.gene52364:CDS 40.0%
ATACGACACACCAAACAGTT+TGG + chr3.1:60859075-60859094 MS.gene52364:CDS 40.0%
CGTAGAAACACCATCATGTT+GGG + chr3.1:60858420-60858439 MS.gene52364:CDS 40.0%
CTTCTCAACCATTGTTGATC+GGG + chr3.1:60859423-60859442 MS.gene52364:CDS 40.0%
CTTTCTTGTTCCATGGTACT+TGG + chr3.1:60859923-60859942 MS.gene52364:CDS 40.0%
GGAACAGGTAGCATATCAAA+GGG + chr3.1:60859691-60859710 MS.gene52364:CDS 40.0%
GGATATGACCTTGGAATTTC+AGG + chr3.1:60858024-60858043 MS.gene52364:CDS 40.0%
GGTAGCATATCAAAGGGAAA+TGG + chr3.1:60859697-60859716 MS.gene52364:CDS 40.0%
GTAGAAACACCATCATGTTG+GGG + chr3.1:60858421-60858440 MS.gene52364:CDS 40.0%
TAGAAACACCATCATGTTGG+GGG + chr3.1:60858422-60858441 MS.gene52364:CDS 40.0%
TATTGCTATGAAGATTGCGG+TGG + chr3.1:60859636-60859655 MS.gene52364:intron 40.0%
TATTGGCGCTACTACGTTAA+AGG + chr3.1:60860039-60860058 MS.gene52364:CDS 40.0%
TGACAACAATCCAAGTACCA+TGG - chr3.1:60859936-60859955 None:intergenic 40.0%
TGTGTTGTCTCAGACATTCA+TGG + chr3.1:60859873-60859892 MS.gene52364:CDS 40.0%
! ATTTTGAGCACCTCCAGTAA+TGG - chr3.1:60858472-60858491 None:intergenic 40.0%
! GCAATTTCCGAAAGGTACAA+TGG - chr3.1:60858881-60858900 None:intergenic 40.0%
!! AGAGTCTTGTTCATCATAGG+TGG + chr3.1:60859454-60859473 MS.gene52364:CDS 40.0%
!! CGAAGAGTCTTGTTCATCAT+AGG + chr3.1:60859451-60859470 MS.gene52364:CDS 40.0%
!! TTACTTCTCGGCTTTGGAAT+TGG + chr3.1:60858516-60858535 MS.gene52364:CDS 40.0%
!!! GCATCTAGTGGACTCATTTT+TGG + chr3.1:60858003-60858022 MS.gene52364:CDS 40.0%
!!! TCCGCTTTTTCAACAACTCA+CGG + chr3.1:60859282-60859301 MS.gene52364:CDS 40.0%
ACAACTCACGGGGATCAATA+TGG + chr3.1:60859294-60859313 MS.gene52364:CDS 45.0%
AGAAACACCATCATGTTGGG+GGG + chr3.1:60858423-60858442 MS.gene52364:CDS 45.0%
AGTCGAATCACATCCACACT+GGG + chr3.1:60858396-60858415 MS.gene52364:CDS 45.0%
CCCGTGAGTTGTTGAAAAAG+CGG - chr3.1:60859286-60859305 None:intergenic 45.0%
CGGAAATTGCTCCACCAAAA+TGG + chr3.1:60858891-60858910 MS.gene52364:CDS 45.0%
CGGAACAGGTAGCATATCAA+AGG + chr3.1:60859690-60859709 MS.gene52364:CDS 45.0%
CTCTTCTTGCCTGAAACCAA+AGG + chr3.1:60859973-60859992 MS.gene52364:CDS 45.0%
CTTTCCTGAAGTCCTTGAGA+AGG + chr3.1:60858269-60858288 MS.gene52364:CDS 45.0%
GAGACAATATCGACCTCACT+TGG + chr3.1:60859243-60859262 MS.gene52364:CDS 45.0%
GGCTACTCCATTGTACCTTT+CGG + chr3.1:60858871-60858890 MS.gene52364:intron 45.0%
GGTATCATCTTTCTTGTGGG+TGG + chr3.1:60858444-60858463 MS.gene52364:CDS 45.0%
TAGTCGAATCACATCCACAC+TGG + chr3.1:60858395-60858414 MS.gene52364:CDS 45.0%
TCAACCATTGTTGATCGGGT+TGG + chr3.1:60859427-60859446 MS.gene52364:CDS 45.0%
TGCATTGTTGCAGCATCTAG+TGG + chr3.1:60857991-60858010 MS.gene52364:CDS 45.0%
TTGATGAGTGTCTACTCTGC+AGG + chr3.1:60859736-60859755 MS.gene52364:CDS 45.0%
TTGCTCTCAACATCCACTTC+TGG - chr3.1:60857946-60857965 None:intergenic 45.0%
TTGGTGGAGCAATTTCCGAA+AGG - chr3.1:60858889-60858908 None:intergenic 45.0%
! AGTGTCTACTCTGCAGGTTT+TGG + chr3.1:60859742-60859761 MS.gene52364:CDS 45.0%
! CTTAATGCTCCTCGCCATTT+TGG - chr3.1:60858908-60858927 None:intergenic 45.0%
!! CCAGCAGCATTGATCACTAT+CGG + chr3.1:60859040-60859059 MS.gene52364:CDS 45.0%
!! GGGGGTATCATCTTTCTTGT+GGG + chr3.1:60858441-60858460 MS.gene52364:CDS 45.0%
!! TCTACTCTGCAGGTTTTGGT+TGG + chr3.1:60859746-60859765 MS.gene52364:CDS 45.0%
!!! CCGCTTTTTCAACAACTCAC+GGG + chr3.1:60859283-60859302 MS.gene52364:CDS 45.0%
!!! CGCTTTTTCAACAACTCACG+GGG + chr3.1:60859284-60859303 MS.gene52364:CDS 45.0%
!!! TGCAGGTTTTGGTTGGTCAT+GGG + chr3.1:60859753-60859772 MS.gene52364:CDS 45.0%
AATCTCTCTTGGCTTAGCCG+TGG + chr3.1:60859015-60859034 MS.gene52364:CDS 50.0%
ACGTCGTCACTGTATCTAGC+TGG + chr3.1:60858351-60858370 MS.gene52364:CDS 50.0%
ATTGCTCCACCAAAATGGCG+AGG + chr3.1:60858896-60858915 MS.gene52364:CDS 50.0%
ATTGTGATGGCAATGGCGAC+TGG + chr3.1:60859661-60859680 MS.gene52364:CDS 50.0%
CAAAGCAGACACACCAGAAG+TGG + chr3.1:60857930-60857949 MS.gene52364:CDS 50.0%
CCGATAGTGATCAATGCTGC+TGG - chr3.1:60859043-60859062 None:intergenic 50.0%
CCTTGAGAAGGCTGCAAAAG+CGG + chr3.1:60858281-60858300 MS.gene52364:CDS 50.0%
CGACACACCAAACAGTTTGG+TGG + chr3.1:60859078-60859097 MS.gene52364:CDS 50.0%
CGTCGTCACTGTATCTAGCT+GGG + chr3.1:60858352-60858371 MS.gene52364:CDS 50.0%
GATCAATGCTGCTGGAACCA+CGG - chr3.1:60859035-60859054 None:intergenic 50.0%
GATGATACCCCCCAACATGA+TGG - chr3.1:60858433-60858452 None:intergenic 50.0%
GATTGCGGTGGCTATTGTGA+TGG + chr3.1:60859648-60859667 MS.gene52364:intron 50.0%
GCAACTGCTATCACCAAGTG+AGG - chr3.1:60859259-60859278 None:intergenic 50.0%
GGTCGATTACTTCTCGGCTT+TGG + chr3.1:60858510-60858529 MS.gene52364:CDS 50.0%
GGTGGCTATTGTGATGGCAA+TGG + chr3.1:60859654-60859673 MS.gene52364:CDS 50.0%
TCGACCAACCCGATCAACAA+TGG - chr3.1:60859434-60859453 None:intergenic 50.0%
TGTTGCCAAGCAAAGCTGCT+TGG - chr3.1:60859366-60859385 None:intergenic 50.0%
! CAAACAGTTTGGTGGAGCGT+GGG + chr3.1:60859086-60859105 MS.gene52364:CDS 50.0%
!! AATGCTCCTCGCCATTTTGG+TGG - chr3.1:60858905-60858924 None:intergenic 50.0%
!! GGGGGGTATCATCTTTCTTG+TGG + chr3.1:60858440-60858459 MS.gene52364:CDS 50.0%
!!! CTGCAGGTTTTGGTTGGTCA+TGG + chr3.1:60859752-60859771 MS.gene52364:CDS 50.0%
!!! GCAGGTTTTGGTTGGTCATG+GGG + chr3.1:60859754-60859773 MS.gene52364:CDS 50.0%
AGAGAGATTCGCCATCCCCA+AGG - chr3.1:60859004-60859023 None:intergenic 55.0%
CCACGCTCCACCAAACTGTT+TGG - chr3.1:60859088-60859107 None:intergenic 55.0%
GAGAGATTCGCCATCCCCAA+GGG - chr3.1:60859003-60859022 None:intergenic 55.0%
GCAATGGCGACTGGTGTTCA+CGG + chr3.1:60859670-60859689 MS.gene52364:CDS 55.0%
GCAGCCTTCTCAAGGACTTC+AGG - chr3.1:60858276-60858295 None:intergenic 55.0%
GGTCACCAAGCAGCTTTGCT+TGG + chr3.1:60859358-60859377 MS.gene52364:CDS 55.0%
GGTCATGGGGTCCTCTATTG+TGG + chr3.1:60859767-60859786 MS.gene52364:CDS 55.0%
TGGGGATGGCGAATCTCTCT+TGG + chr3.1:60859004-60859023 MS.gene52364:CDS 55.0%
TGTCGCCGCAAAACACCCTT+GGG + chr3.1:60858985-60859004 MS.gene52364:CDS 55.0%
TTGTCGCCGCAAAACACCCT+TGG + chr3.1:60858984-60859003 MS.gene52364:CDS 55.0%
! CCAAACAGTTTGGTGGAGCG+TGG + chr3.1:60859085-60859104 MS.gene52364:CDS 55.0%
! GGTGTTTCTACGTCCCAGTG+TGG - chr3.1:60858412-60858431 None:intergenic 55.0%
!! CCGCTTTTGCAGCCTTCTCA+AGG - chr3.1:60858284-60858303 None:intergenic 55.0%
!! CTTGTGGGTGGTGCCATTAC+TGG + chr3.1:60858456-60858475 MS.gene52364:CDS 55.0%
!! GGCGAGGAGCATTAAGCACA+TGG + chr3.1:60858912-60858931 MS.gene52364:CDS 55.0%
!!! AAGTTGGCGTTTTGGCTGCG+GGG + chr3.1:60858951-60858970 MS.gene52364:CDS 55.0%
!!! CAAGTTGGCGTTTTGGCTGC+GGG + chr3.1:60858950-60858969 MS.gene52364:CDS 55.0%
!!! CCATCCCCAAGGGTGTTTTG+CGG - chr3.1:60858993-60859012 None:intergenic 55.0%
!!! GCAAGTTGGCGTTTTGGCTG+CGG + chr3.1:60858949-60858968 MS.gene52364:CDS 55.0%
CCGCAAAACACCCTTGGGGA+TGG + chr3.1:60858990-60859009 MS.gene52364:CDS 60.0%
GCGACTGGTGTTCACGGAAC+AGG + chr3.1:60859676-60859695 MS.gene52364:CDS 60.0%
GTCGCCGCAAAACACCCTTG+GGG + chr3.1:60858986-60859005 MS.gene52364:CDS 60.0%
!! GTGGGTGGTGCCATTACTGG+AGG + chr3.1:60858459-60858478 MS.gene52364:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 60857913 60860086 60857913 ID=MS.gene52364
chr3.1 mRNA 60857913 60860086 60857913 ID=MS.gene52364.t1;Parent=MS.gene52364
chr3.1 exon 60857913 60858045 60857913 ID=MS.gene52364.t1.exon1;Parent=MS.gene52364.t1
chr3.1 CDS 60857913 60858045 60857913 ID=cds.MS.gene52364.t1;Parent=MS.gene52364.t1
chr3.1 exon 60858232 60858551 60858232 ID=MS.gene52364.t1.exon2;Parent=MS.gene52364.t1
chr3.1 CDS 60858232 60858551 60858232 ID=cds.MS.gene52364.t1;Parent=MS.gene52364.t1
chr3.1 exon 60858872 60859498 60858872 ID=MS.gene52364.t1.exon3;Parent=MS.gene52364.t1
chr3.1 CDS 60858872 60859498 60858872 ID=cds.MS.gene52364.t1;Parent=MS.gene52364.t1
chr3.1 exon 60859649 60860086 60859649 ID=MS.gene52364.t1.exon4;Parent=MS.gene52364.t1
chr3.1 CDS 60859649 60860086 60859649 ID=cds.MS.gene52364.t1;Parent=MS.gene52364.t1
Gene Sequence

>MS.gene52364

ATGGCTGGTGGAGGACTCAAAGCAGACACACCAGAAGTGGATGTTGAGAGCAAGATAACAATCTCAGTTGTCATCACTTGCATTGTTGCAGCATCTAGTGGACTCATTTTTGGATATGACCTTGGAATTTCAGGTTCTTTTTCATGTTATAACTTTCATTATAAATGTTTCTGCTATCCCCTTCTAAAGCATCAAGTATATAAGCATGATATATTATACATTTATAGTCATTTAAACGAATTTTCGTTGAGATAATTGTAGGTTTTTAAGGTGTTTAAGCTAACCAATTCAATTCTTGATGGAAATGTTAAAATTTCAGGAGGTGTTACTACAATGATGCCATTCCTCGAAAAATTCTTTCCTGAAGTCCTTGAGAAGGCTGCAAAAGCGGAGTCAAACACATATTGTGTGTATGATAGTCACATGTTAACATTATTCACGTCGTCACTGTATCTAGCTGGGTTAGTAACTTCTCTAATAGCTAGTCGAATCACATCCACACTGGGACGTAGAAACACCATCATGTTGGGGGGTATCATCTTTCTTGTGGGTGGTGCCATTACTGGAGGTGCTCAAAATATTGCTATGCTCATTATTGGTCGATTACTTCTCGGCTTTGGAATTGGTTTCACTAATCAAGTGAGTTATTCCGTGTAATATTTTATGATTGATTACCATTTTGAATCTTCAAAATGTAGAATTTTGACAAGTAGGTTTCTAAGTTTACGAATCAACAAATTAGTTTGGAAATTGAAGATCGCCAATCAATTTAGTTGTTTGTCAATCAATTCAATTGATGAAACTGGATGGCATGATATCTAATTATTGATAGAATTGACTAGCGAAATGATTAAATTGATTGACAATATTCAATTTTAGAGACTAATTTGACATTTATGATTTTAAAAAAAAATTATGTAAATATACAACCATTATTGAAGTATGTTGATTGATTTAAGGCTACTCCATTGTACCTTTCGGAAATTGCTCCACCAAAATGGCGAGGAGCATTAAGCACATGGTTTCAATTTTTTATGCAAGTTGGCGTTTTGGCTGCGGGGTTCATAAACTTTGTCGCCGCAAAACACCCTTGGGGATGGCGAATCTCTCTTGGCTTAGCCGTGGTTCCAGCAGCATTGATCACTATCGGCGCCTTAATTATATACGACACACCAAACAGTTTGGTGGAGCGTGGGAAGATAGATGAAGCCAGAAAAGCTTTGCATAAAATCAGAGGCTCAGACAATGTTGAACCCGAGTTAGAAGAACTTGTTAGACAATCACAATATACAAAATCTTTGAAGCAAGAGCCTTTTTTGACCATATTGGAGAGACAATATCGACCTCACTTGGTGATAGCAGTTGCTATTCCGCTTTTTCAACAACTCACGGGGATCAATATGGTTGCATTCTATGCACCTAACCTTTTTGTATCGATTGGGTTTGGTCACCAAGCAGCTTTGCTTGGCAACATTATACTTGGACTTGTTAACATTGTTTCAGTCATCGTCTTCTCAACCATTGTTGATCGGGTTGGTCGAAGAGTCTTGTTCATCATAGGTGGCATTCAGATGCTTATCAGTCAAGTAAGCTTAATACTACCTAGATTTCTATCTTTAATTCTCTCAGCACTAAATTTAGTTTAGAAATTAGATAGAGATAGTACTATATTATACACATAATTTGCATTGCGCATCTTATTATGTTACTAATTTGTGTTATCTATTGCTATGAAGATTGCGGTGGCTATTGTGATGGCAATGGCGACTGGTGTTCACGGAACAGGTAGCATATCAAAGGGAAATGGTACATTGTTATTAGTGTTGATGAGTGTCTACTCTGCAGGTTTTGGTTGGTCATGGGGTCCTCTATTGTGGATAATTCCAAGTGAAATTTTTCCTTTGAAAATCAGAACAACTGGACAAAGCATAGCTATTTCTGTGCAATTCATAACTATATTTGTGTTGTCTCAGACATTCATGGCAATGTTATGTCACTTGAAGTATGGTTCTTTCTTGTTCCATGGTACTTGGATTGTTGTCATGACCCTCTTTATTATACTCTTCTTGCCTGAAACCAAAGGACTTCATTTGGATTCAATCTATGACATATGGTGTAAACACTGGTATTGGCGCTACTACGTTAAAGGAGACGTTACAAAAAATCAAAACTGA
Protein sequence

>MS.gene52364.t1

MAGGGLKADTPEVDVESKITISVVITCIVAASSGLIFGYDLGISGGVTTMMPFLEKFFPEVLEKAAKAESNTYCVYDSHMLTLFTSSLYLAGLVTSLIASRITSTLGRRNTIMLGGIIFLVGGAITGGAQNIAMLIIGRLLLGFGIGFTNQATPLYLSEIAPPKWRGALSTWFQFFMQVGVLAAGFINFVAAKHPWGWRISLGLAVVPAALITIGALIIYDTPNSLVERGKIDEARKALHKIRGSDNVEPELEELVRQSQYTKSLKQEPFLTILERQYRPHLVIAVAIPLFQQLTGINMVAFYAPNLFVSIGFGHQAALLGNIILGLVNIVSVIVFSTIVDRVGRRVLFIIGGIQMLISQIAVAIVMAMATGVHGTGSISKGNGTLLLVLMSVYSAGFGWSWGPLLWIIPSEIFPLKIRTTGQSIAISVQFITIFVLSQTFMAMLCHLKYGSFLFHGTWIVVMTLFIILFLPETKGLHLDSIYDIWCKHWYWRYYVKGDVTKNQN