Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52366.t1 | RHN68609.1 | 95.3 | 507 | 24 | 0 | 1 | 507 | 1 | 507 | 1.00E-270 | 942.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52366.t1 | Q93Y91 | 62.9 | 502 | 182 | 3 | 1 | 498 | 1 | 502 | 6.8e-175 | 615.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52366.t1 | A0A396ISD9 | 95.3 | 507 | 24 | 0 | 1 | 507 | 1 | 507 | 7.2e-271 | 942.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52366.t1 | MTR_3g074390 | 78.320 | 512 | 106 | 1 | 1 | 507 | 1 | 512 | 0.0 | 835 |
MS.gene52366.t1 | MTR_3g074410 | 76.817 | 509 | 116 | 1 | 1 | 507 | 1 | 509 | 0.0 | 813 |
MS.gene52366.t1 | MTR_3g074270 | 68.136 | 499 | 138 | 2 | 1 | 499 | 1 | 478 | 0.0 | 702 |
MS.gene52366.t1 | MTR_3g074340 | 96.584 | 322 | 11 | 0 | 186 | 507 | 19 | 340 | 0.0 | 634 |
MS.gene52366.t1 | MTR_3g074370 | 96.273 | 322 | 12 | 0 | 186 | 507 | 19 | 340 | 0.0 | 631 |
MS.gene52366.t1 | MTR_3g074320 | 95.652 | 322 | 14 | 0 | 186 | 507 | 19 | 340 | 0.0 | 629 |
MS.gene52366.t1 | MTR_3g074380 | 77.596 | 366 | 79 | 2 | 1 | 363 | 1 | 366 | 0.0 | 584 |
MS.gene52366.t1 | MTR_3g008160 | 51.896 | 501 | 231 | 7 | 8 | 502 | 6 | 502 | 0.0 | 536 |
MS.gene52366.t1 | MTR_3g008170 | 52.353 | 510 | 227 | 7 | 5 | 501 | 4 | 510 | 0.0 | 522 |
MS.gene52366.t1 | MTR_5g006070 | 50.101 | 495 | 237 | 7 | 15 | 503 | 14 | 504 | 2.45e-178 | 511 |
MS.gene52366.t1 | MTR_0204s0020 | 49.072 | 485 | 242 | 4 | 12 | 495 | 10 | 490 | 1.47e-175 | 503 |
MS.gene52366.t1 | MTR_5g041550 | 51.176 | 510 | 242 | 5 | 1 | 505 | 1 | 508 | 4.65e-174 | 500 |
MS.gene52366.t1 | MTR_3g074400 | 59.161 | 453 | 131 | 6 | 50 | 481 | 1 | 420 | 1.53e-172 | 493 |
MS.gene52366.t1 | MTR_0009s0370 | 49.501 | 501 | 245 | 6 | 8 | 503 | 7 | 504 | 1.35e-171 | 494 |
MS.gene52366.t1 | MTR_0204s0020 | 48.454 | 485 | 242 | 5 | 12 | 495 | 10 | 487 | 1.60e-171 | 493 |
MS.gene52366.t1 | MTR_3g093010 | 51.282 | 507 | 240 | 5 | 4 | 505 | 3 | 507 | 9.68e-171 | 491 |
MS.gene52366.t1 | MTR_3g008160 | 51.204 | 457 | 215 | 6 | 50 | 502 | 1 | 453 | 1.54e-169 | 486 |
MS.gene52366.t1 | MTR_1g038630 | 47.714 | 503 | 259 | 3 | 1 | 501 | 1 | 501 | 6.61e-169 | 487 |
MS.gene52366.t1 | MTR_5g082540 | 48.185 | 496 | 251 | 4 | 10 | 501 | 8 | 501 | 3.31e-168 | 485 |
MS.gene52366.t1 | MTR_7g091690 | 48.697 | 499 | 247 | 5 | 1 | 494 | 1 | 495 | 1.23e-167 | 483 |
MS.gene52366.t1 | MTR_5g094760 | 49.098 | 499 | 245 | 5 | 1 | 494 | 1 | 495 | 3.03e-167 | 483 |
MS.gene52366.t1 | MTR_4g116790 | 46.215 | 502 | 265 | 4 | 3 | 503 | 7 | 504 | 7.12e-167 | 482 |
MS.gene52366.t1 | MTR_0204s0040 | 46.247 | 493 | 260 | 4 | 3 | 494 | 9 | 497 | 2.31e-165 | 478 |
MS.gene52366.t1 | MTR_4g091370 | 53.074 | 488 | 223 | 5 | 15 | 498 | 15 | 500 | 1.19e-164 | 476 |
MS.gene52366.t1 | MTR_1g104750 | 46.521 | 503 | 260 | 7 | 1 | 498 | 1 | 499 | 8.41e-164 | 473 |
MS.gene52366.t1 | MTR_4g116770 | 46.247 | 493 | 260 | 4 | 3 | 494 | 205 | 693 | 1.27e-162 | 478 |
MS.gene52366.t1 | MTR_3g023480 | 48.089 | 497 | 251 | 5 | 15 | 506 | 13 | 507 | 2.06e-162 | 470 |
MS.gene52366.t1 | MTR_1g104770 | 45.726 | 503 | 265 | 6 | 1 | 498 | 1 | 500 | 9.57e-162 | 468 |
MS.gene52366.t1 | MTR_1g104780 | 47.826 | 506 | 253 | 8 | 1 | 500 | 1 | 501 | 3.40e-161 | 468 |
MS.gene52366.t1 | MTR_5g006070 | 49.130 | 460 | 224 | 7 | 50 | 503 | 1 | 456 | 5.92e-161 | 465 |
MS.gene52366.t1 | MTR_3g007910 | 48.795 | 498 | 220 | 7 | 4 | 498 | 3 | 468 | 3.14e-158 | 458 |
MS.gene52366.t1 | MTR_4g090600 | 51.378 | 508 | 237 | 6 | 7 | 506 | 3 | 508 | 2.12e-155 | 452 |
MS.gene52366.t1 | MTR_1g038600 | 45.509 | 501 | 255 | 4 | 1 | 501 | 1 | 483 | 1.03e-154 | 450 |
MS.gene52366.t1 | MTR_6g087040 | 46.245 | 506 | 262 | 8 | 1 | 500 | 1 | 502 | 2.50e-154 | 450 |
MS.gene52366.t1 | MTR_6g088375 | 46.245 | 506 | 262 | 8 | 1 | 500 | 1 | 502 | 2.50e-154 | 450 |
MS.gene52366.t1 | MTR_3g093060 | 50.552 | 453 | 216 | 5 | 50 | 496 | 1 | 451 | 1.80e-153 | 446 |
MS.gene52366.t1 | MTR_8g102860 | 45.547 | 494 | 262 | 6 | 15 | 505 | 18 | 507 | 4.09e-153 | 447 |
MS.gene52366.t1 | MTR_8g102860 | 45.534 | 459 | 243 | 6 | 50 | 505 | 1 | 455 | 9.12e-141 | 414 |
MS.gene52366.t1 | MTR_4g116790 | 44.875 | 361 | 196 | 3 | 3 | 362 | 7 | 365 | 1.06e-110 | 333 |
MS.gene52366.t1 | MTR_3g074330 | 92.405 | 158 | 5 | 1 | 1 | 151 | 1 | 158 | 2.37e-93 | 281 |
MS.gene52366.t1 | MTR_3g074360 | 92.405 | 158 | 5 | 1 | 1 | 151 | 1 | 158 | 2.37e-93 | 281 |
MS.gene52366.t1 | MTR_3g074310 | 91.772 | 158 | 6 | 1 | 1 | 151 | 1 | 158 | 1.41e-92 | 280 |
MS.gene52366.t1 | MTR_4g069500 | 30.739 | 501 | 299 | 10 | 27 | 505 | 34 | 508 | 1.13e-59 | 205 |
MS.gene52366.t1 | MTR_4g072030 | 30.816 | 490 | 291 | 10 | 27 | 495 | 31 | 493 | 3.18e-59 | 204 |
MS.gene52366.t1 | MTR_4g069500 | 32.569 | 436 | 265 | 8 | 92 | 505 | 30 | 458 | 6.64e-59 | 202 |
MS.gene52366.t1 | MTR_8g077890 | 31.365 | 491 | 280 | 13 | 28 | 490 | 24 | 485 | 4.69e-57 | 197 |
MS.gene52366.t1 | MTR_6g088450 | 31.545 | 466 | 275 | 12 | 28 | 477 | 63 | 500 | 2.19e-56 | 196 |
MS.gene52366.t1 | MTR_3g116240 | 30.864 | 486 | 289 | 11 | 27 | 489 | 32 | 493 | 2.58e-56 | 196 |
MS.gene52366.t1 | MTR_8g103500 | 28.252 | 492 | 306 | 10 | 12 | 483 | 3 | 467 | 9.54e-55 | 191 |
MS.gene52366.t1 | MTR_2g013310 | 28.903 | 474 | 301 | 8 | 24 | 487 | 53 | 500 | 1.20e-51 | 184 |
MS.gene52366.t1 | MTR_2g013310 | 29.829 | 409 | 271 | 5 | 88 | 487 | 26 | 427 | 9.10e-51 | 179 |
MS.gene52366.t1 | MTR_5g075300 | 29.796 | 490 | 289 | 12 | 28 | 490 | 24 | 485 | 6.64e-49 | 176 |
MS.gene52366.t1 | MTR_7g446340 | 27.122 | 483 | 312 | 10 | 20 | 490 | 51 | 505 | 6.08e-48 | 174 |
MS.gene52366.t1 | MTR_6g007340 | 27.122 | 483 | 312 | 10 | 20 | 490 | 51 | 505 | 6.08e-48 | 174 |
MS.gene52366.t1 | MTR_5g096000 | 51.685 | 178 | 68 | 1 | 4 | 181 | 3 | 162 | 2.80e-47 | 166 |
MS.gene52366.t1 | MTR_5g096000 | 51.515 | 132 | 63 | 1 | 368 | 498 | 168 | 299 | 1.20e-33 | 129 |
MS.gene52366.t1 | MTR_8g077300 | 28.010 | 407 | 276 | 4 | 82 | 483 | 79 | 473 | 1.20e-44 | 164 |
MS.gene52366.t1 | MTR_4g077740 | 28.721 | 477 | 301 | 12 | 22 | 483 | 44 | 496 | 3.51e-44 | 163 |
MS.gene52366.t1 | MTR_7g094450 | 28.747 | 407 | 274 | 5 | 79 | 483 | 77 | 469 | 6.84e-44 | 161 |
MS.gene52366.t1 | MTR_8g077310 | 27.861 | 402 | 283 | 2 | 82 | 483 | 87 | 481 | 1.91e-43 | 160 |
MS.gene52366.t1 | MTR_8g077310 | 27.621 | 391 | 276 | 2 | 93 | 483 | 1 | 384 | 5.76e-43 | 157 |
MS.gene52366.t1 | MTR_3g084110 | 25.833 | 480 | 320 | 10 | 34 | 506 | 39 | 489 | 8.25e-41 | 153 |
MS.gene52366.t1 | MTR_7g094110 | 28.218 | 404 | 274 | 6 | 82 | 483 | 82 | 471 | 6.28e-40 | 150 |
MS.gene52366.t1 | MTR_1g116660 | 26.392 | 413 | 287 | 8 | 102 | 506 | 98 | 501 | 4.38e-39 | 149 |
MS.gene52366.t1 | MTR_5g020270 | 26.799 | 403 | 286 | 4 | 82 | 483 | 90 | 484 | 4.86e-39 | 148 |
MS.gene52366.t1 | MTR_7g082270 | 26.305 | 479 | 318 | 10 | 9 | 483 | 51 | 498 | 5.25e-39 | 149 |
MS.gene52366.t1 | MTR_7g005910 | 27.292 | 469 | 309 | 10 | 29 | 490 | 39 | 482 | 7.83e-39 | 148 |
MS.gene52366.t1 | MTR_6g018790 | 26.850 | 473 | 309 | 9 | 16 | 483 | 98 | 538 | 8.83e-39 | 149 |
MS.gene52366.t1 | MTR_5g020270 | 26.531 | 392 | 279 | 4 | 93 | 483 | 1 | 384 | 1.70e-38 | 145 |
MS.gene52366.t1 | MTR_7g113960 | 27.160 | 405 | 275 | 7 | 82 | 483 | 67 | 454 | 2.20e-38 | 146 |
MS.gene52366.t1 | MTR_7g113970 | 25.980 | 408 | 282 | 6 | 82 | 485 | 102 | 493 | 2.69e-38 | 147 |
MS.gene52366.t1 | MTR_5g019870 | 26.879 | 439 | 293 | 9 | 75 | 490 | 49 | 482 | 1.84e-37 | 144 |
MS.gene52366.t1 | MTR_2g020710 | 27.586 | 406 | 273 | 7 | 83 | 483 | 1 | 390 | 2.33e-37 | 142 |
MS.gene52366.t1 | MTR_2g020710 | 27.518 | 407 | 274 | 7 | 82 | 483 | 89 | 479 | 6.46e-37 | 142 |
MS.gene52366.t1 | MTR_1g116650 | 26.733 | 404 | 273 | 7 | 107 | 505 | 146 | 531 | 1.75e-36 | 142 |
MS.gene52366.t1 | MTR_4g069500 | 30.462 | 325 | 197 | 8 | 202 | 505 | 3 | 319 | 4.33e-35 | 134 |
MS.gene52366.t1 | MTR_4g118610 | 26.034 | 411 | 275 | 8 | 82 | 483 | 92 | 482 | 9.51e-35 | 136 |
MS.gene52366.t1 | MTR_7g082270 | 26.230 | 427 | 281 | 9 | 9 | 432 | 51 | 446 | 1.80e-34 | 135 |
MS.gene52366.t1 | MTR_1g022315 | 25.610 | 410 | 283 | 5 | 82 | 483 | 89 | 484 | 2.88e-34 | 135 |
MS.gene52366.t1 | MTR_0064s0040 | 47.651 | 149 | 65 | 2 | 4 | 151 | 5 | 141 | 5.01e-34 | 126 |
MS.gene52366.t1 | MTR_1g022315 | 25.000 | 396 | 281 | 4 | 93 | 483 | 1 | 385 | 1.05e-33 | 132 |
MS.gene52366.t1 | MTR_3g080240 | 27.273 | 462 | 298 | 13 | 28 | 483 | 98 | 527 | 1.11e-33 | 134 |
MS.gene52366.t1 | MTR_5g077580 | 24.581 | 537 | 291 | 11 | 34 | 483 | 37 | 546 | 2.26e-33 | 133 |
MS.gene52366.t1 | MTR_2g049020 | 30.792 | 341 | 208 | 8 | 34 | 364 | 37 | 359 | 3.04e-33 | 133 |
MS.gene52366.t1 | MTR_2g048720 | 29.882 | 338 | 213 | 8 | 34 | 365 | 37 | 356 | 6.19e-33 | 132 |
MS.gene52366.t1 | MTR_5g020270 | 25.743 | 404 | 268 | 7 | 82 | 483 | 90 | 463 | 1.02e-32 | 130 |
MS.gene52366.t1 | MTR_7g094110 | 27.047 | 403 | 260 | 7 | 82 | 483 | 82 | 451 | 1.05e-32 | 130 |
MS.gene52366.t1 | MTR_4g013205 | 26.180 | 466 | 300 | 11 | 28 | 485 | 41 | 470 | 1.09e-32 | 130 |
MS.gene52366.t1 | MTR_8g077310 | 27.817 | 284 | 198 | 2 | 82 | 365 | 87 | 363 | 1.47e-29 | 120 |
MS.gene52366.t1 | MTR_6g087910 | 25.369 | 406 | 268 | 9 | 92 | 485 | 102 | 484 | 2.39e-28 | 118 |
MS.gene52366.t1 | MTR_2g026160 | 29.710 | 276 | 184 | 3 | 106 | 372 | 94 | 368 | 2.42e-28 | 119 |
MS.gene52366.t1 | MTR_7g113960 | 27.407 | 270 | 188 | 3 | 82 | 351 | 67 | 328 | 2.54e-26 | 110 |
MS.gene52366.t1 | MTR_7g113970 | 26.277 | 274 | 194 | 3 | 82 | 355 | 102 | 367 | 5.40e-26 | 110 |
MS.gene52366.t1 | MTR_2g020710 | 26.627 | 338 | 227 | 7 | 82 | 414 | 89 | 410 | 6.25e-26 | 110 |
MS.gene52366.t1 | MTR_2g020710 | 27.715 | 267 | 184 | 4 | 82 | 347 | 89 | 347 | 1.06e-25 | 109 |
MS.gene52366.t1 | MTR_2g020710 | 27.715 | 267 | 184 | 4 | 82 | 347 | 89 | 347 | 1.37e-25 | 108 |
MS.gene52366.t1 | MTR_4g064820 | 26.741 | 359 | 234 | 8 | 22 | 363 | 95 | 441 | 2.64e-25 | 109 |
MS.gene52366.t1 | MTR_4g118610 | 24.854 | 342 | 228 | 8 | 82 | 414 | 92 | 413 | 4.41e-24 | 105 |
MS.gene52366.t1 | MTR_1g038620 | 34.375 | 160 | 86 | 3 | 201 | 360 | 50 | 190 | 4.65e-24 | 99.8 |
MS.gene52366.t1 | MTR_1g114280 | 35.526 | 152 | 79 | 2 | 346 | 497 | 21 | 153 | 1.09e-21 | 92.0 |
MS.gene52366.t1 | MTR_2g026140 | 25.648 | 347 | 218 | 8 | 29 | 365 | 30 | 346 | 2.02e-20 | 95.1 |
MS.gene52366.t1 | MTR_3g116060 | 30.636 | 173 | 113 | 4 | 90 | 258 | 52 | 221 | 9.37e-17 | 84.0 |
MS.gene52366.t1 | MTR_3g116060 | 27.586 | 232 | 147 | 6 | 263 | 481 | 488 | 711 | 3.08e-13 | 72.8 |
MS.gene52366.t1 | MTR_3g118530 | 30.409 | 171 | 116 | 3 | 90 | 258 | 54 | 223 | 9.69e-16 | 80.9 |
MS.gene52366.t1 | MTR_3g118530 | 27.727 | 220 | 139 | 5 | 274 | 481 | 510 | 721 | 4.18e-12 | 69.3 |
MS.gene52366.t1 | MTR_3g118530 | 30.409 | 171 | 116 | 3 | 90 | 258 | 54 | 223 | 2.04e-15 | 79.3 |
MS.gene52366.t1 | MTR_5g044910 | 28.902 | 173 | 120 | 3 | 83 | 253 | 47 | 218 | 4.70e-15 | 78.6 |
MS.gene52366.t1 | MTR_5g024740 | 27.119 | 236 | 150 | 7 | 21 | 253 | 2 | 218 | 1.06e-14 | 77.4 |
MS.gene52366.t1 | MTR_8g073100 | 27.933 | 179 | 126 | 3 | 77 | 253 | 41 | 218 | 1.97e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52366.t1 | AT1G34580 | 62.948 | 502 | 182 | 3 | 1 | 498 | 1 | 502 | 0.0 | 642 |
MS.gene52366.t1 | AT1G34580 | 62.168 | 452 | 168 | 2 | 50 | 498 | 1 | 452 | 0.0 | 577 |
MS.gene52366.t1 | AT1G11260 | 52.745 | 510 | 235 | 5 | 1 | 506 | 1 | 508 | 0.0 | 526 |
MS.gene52366.t1 | AT3G19930 | 52.200 | 500 | 234 | 4 | 4 | 500 | 3 | 500 | 8.13e-180 | 515 |
MS.gene52366.t1 | AT3G19930 | 52.200 | 500 | 234 | 4 | 4 | 500 | 3 | 500 | 8.13e-180 | 515 |
MS.gene52366.t1 | AT5G26340 | 48.919 | 509 | 252 | 6 | 1 | 504 | 1 | 506 | 9.11e-177 | 508 |
MS.gene52366.t1 | AT4G21480 | 51.992 | 502 | 237 | 4 | 1 | 500 | 1 | 500 | 3.56e-176 | 505 |
MS.gene52366.t1 | AT3G19940 | 50.607 | 494 | 235 | 5 | 19 | 505 | 21 | 512 | 1.70e-175 | 504 |
MS.gene52366.t1 | AT5G23270 | 51.491 | 503 | 233 | 7 | 1 | 496 | 1 | 499 | 1.42e-174 | 501 |
MS.gene52366.t1 | AT4G02050 | 48.141 | 511 | 253 | 6 | 1 | 506 | 1 | 504 | 7.04e-174 | 499 |
MS.gene52366.t1 | AT4G02050 | 48.141 | 511 | 253 | 6 | 1 | 506 | 1 | 504 | 7.04e-174 | 499 |
MS.gene52366.t1 | AT1G50310 | 50.722 | 485 | 234 | 5 | 19 | 500 | 21 | 503 | 4.41e-171 | 493 |
MS.gene52366.t1 | AT5G61520 | 47.531 | 486 | 244 | 5 | 17 | 495 | 18 | 499 | 9.49e-162 | 469 |
MS.gene52366.t1 | AT5G26250 | 45.582 | 498 | 265 | 5 | 9 | 504 | 8 | 501 | 1.39e-154 | 450 |
MS.gene52366.t1 | AT3G05960 | 44.800 | 500 | 270 | 5 | 9 | 506 | 7 | 502 | 4.23e-151 | 441 |
MS.gene52366.t1 | AT5G61520 | 46.696 | 454 | 231 | 5 | 49 | 495 | 2 | 451 | 3.59e-147 | 430 |
MS.gene52366.t1 | AT1G77210 | 43.222 | 509 | 278 | 9 | 1 | 503 | 1 | 504 | 5.04e-147 | 431 |
MS.gene52366.t1 | AT1G77210 | 43.222 | 509 | 278 | 9 | 1 | 503 | 1 | 504 | 5.04e-147 | 431 |
MS.gene52366.t1 | AT1G07340 | 43.426 | 502 | 275 | 6 | 1 | 498 | 1 | 497 | 1.17e-139 | 412 |
MS.gene52366.t1 | AT1G50310 | 49.716 | 352 | 173 | 4 | 151 | 500 | 11 | 360 | 2.82e-119 | 355 |
MS.gene52366.t1 | AT1G77210 | 40.845 | 355 | 203 | 7 | 151 | 503 | 6 | 355 | 1.06e-97 | 299 |
MS.gene52366.t1 | AT3G18830 | 31.315 | 479 | 283 | 9 | 27 | 483 | 40 | 494 | 6.23e-59 | 204 |
MS.gene52366.t1 | AT2G16120 | 30.539 | 501 | 301 | 13 | 27 | 505 | 30 | 505 | 2.44e-58 | 201 |
MS.gene52366.t1 | AT2G16130 | 30.595 | 487 | 291 | 12 | 27 | 490 | 30 | 492 | 2.60e-56 | 196 |
MS.gene52366.t1 | AT2G18480 | 31.702 | 470 | 270 | 11 | 38 | 483 | 37 | 479 | 1.27e-54 | 191 |
MS.gene52366.t1 | AT4G36670 | 29.652 | 489 | 292 | 12 | 27 | 490 | 21 | 482 | 4.46e-52 | 184 |
MS.gene52366.t1 | AT2G20780 | 27.463 | 477 | 310 | 10 | 20 | 487 | 51 | 500 | 6.93e-48 | 174 |
MS.gene52366.t1 | AT2G20780 | 27.869 | 427 | 289 | 8 | 87 | 505 | 42 | 457 | 2.66e-46 | 168 |
MS.gene52366.t1 | AT2G48020 | 28.676 | 408 | 273 | 6 | 82 | 486 | 68 | 460 | 8.21e-46 | 167 |
MS.gene52366.t1 | AT2G48020 | 28.676 | 408 | 273 | 6 | 82 | 486 | 68 | 460 | 8.21e-46 | 167 |
MS.gene52366.t1 | AT1G75220 | 27.861 | 402 | 283 | 2 | 82 | 483 | 88 | 482 | 5.21e-45 | 165 |
MS.gene52366.t1 | AT1G54730 | 28.467 | 411 | 264 | 8 | 82 | 483 | 72 | 461 | 3.46e-44 | 162 |
MS.gene52366.t1 | AT5G17010 | 29.436 | 479 | 297 | 12 | 21 | 483 | 45 | 498 | 2.26e-43 | 160 |
MS.gene52366.t1 | AT5G17010 | 29.436 | 479 | 297 | 12 | 21 | 483 | 45 | 498 | 2.26e-43 | 160 |
MS.gene52366.t1 | AT5G17010 | 29.436 | 479 | 297 | 12 | 21 | 483 | 45 | 498 | 2.26e-43 | 160 |
MS.gene52366.t1 | AT5G16150 | 29.310 | 406 | 265 | 6 | 86 | 485 | 151 | 540 | 2.39e-41 | 156 |
MS.gene52366.t1 | AT5G16150 | 29.310 | 406 | 265 | 6 | 86 | 485 | 151 | 540 | 2.39e-41 | 156 |
MS.gene52366.t1 | AT5G16150 | 29.310 | 406 | 265 | 6 | 86 | 485 | 151 | 540 | 2.39e-41 | 156 |
MS.gene52366.t1 | AT1G19450 | 26.866 | 402 | 287 | 2 | 82 | 483 | 89 | 483 | 3.43e-41 | 154 |
MS.gene52366.t1 | AT1G08930 | 25.880 | 483 | 314 | 10 | 8 | 483 | 42 | 487 | 1.25e-40 | 153 |
MS.gene52366.t1 | AT1G08930 | 25.880 | 483 | 314 | 10 | 8 | 483 | 42 | 487 | 1.25e-40 | 153 |
MS.gene52366.t1 | AT1G08900 | 27.363 | 402 | 280 | 4 | 82 | 483 | 23 | 412 | 1.89e-40 | 151 |
MS.gene52366.t1 | AT5G59250 | 29.278 | 485 | 291 | 13 | 22 | 483 | 97 | 552 | 2.96e-40 | 153 |
MS.gene52366.t1 | AT1G08900 | 27.363 | 402 | 280 | 4 | 82 | 483 | 57 | 446 | 4.33e-40 | 150 |
MS.gene52366.t1 | AT1G08900 | 27.363 | 402 | 280 | 4 | 82 | 483 | 65 | 454 | 5.37e-40 | 150 |
MS.gene52366.t1 | AT1G08900 | 27.363 | 402 | 280 | 4 | 82 | 483 | 65 | 454 | 5.37e-40 | 150 |
MS.gene52366.t1 | AT5G27350 | 26.980 | 404 | 279 | 5 | 84 | 485 | 73 | 462 | 8.13e-40 | 150 |
MS.gene52366.t1 | AT1G54730 | 27.561 | 410 | 248 | 9 | 82 | 483 | 72 | 440 | 1.90e-39 | 149 |
MS.gene52366.t1 | AT1G54730 | 28.649 | 370 | 234 | 8 | 82 | 442 | 72 | 420 | 2.84e-39 | 148 |
MS.gene52366.t1 | AT3G05160 | 26.068 | 468 | 315 | 5 | 16 | 483 | 14 | 450 | 1.31e-38 | 147 |
MS.gene52366.t1 | AT3G03090 | 30.435 | 414 | 260 | 9 | 85 | 483 | 98 | 498 | 1.69e-38 | 147 |
MS.gene52366.t1 | AT3G05165 | 26.068 | 468 | 315 | 5 | 16 | 483 | 23 | 459 | 3.54e-38 | 145 |
MS.gene52366.t1 | AT3G05165 | 26.068 | 468 | 315 | 5 | 16 | 483 | 23 | 459 | 3.54e-38 | 145 |
MS.gene52366.t1 | AT3G05165 | 26.068 | 468 | 315 | 5 | 16 | 483 | 23 | 459 | 3.54e-38 | 145 |
MS.gene52366.t1 | AT3G05400 | 26.667 | 405 | 283 | 5 | 82 | 485 | 66 | 457 | 5.28e-38 | 145 |
MS.gene52366.t1 | AT3G05160 | 27.000 | 400 | 280 | 3 | 84 | 483 | 14 | 401 | 6.91e-38 | 144 |
MS.gene52366.t1 | AT3G05160 | 27.000 | 400 | 280 | 3 | 84 | 483 | 14 | 401 | 6.91e-38 | 144 |
MS.gene52366.t1 | AT4G04760 | 27.833 | 406 | 276 | 5 | 82 | 483 | 12 | 404 | 1.38e-37 | 143 |
MS.gene52366.t1 | AT3G05400 | 29.032 | 372 | 249 | 6 | 116 | 485 | 79 | 437 | 1.65e-37 | 143 |
MS.gene52366.t1 | AT4G04760 | 27.833 | 406 | 276 | 5 | 82 | 483 | 71 | 463 | 4.42e-37 | 143 |
MS.gene52366.t1 | AT1G08890 | 28.218 | 404 | 274 | 8 | 82 | 483 | 67 | 456 | 2.87e-36 | 140 |
MS.gene52366.t1 | AT1G08900 | 28.116 | 345 | 236 | 4 | 82 | 426 | 65 | 397 | 3.88e-36 | 139 |
MS.gene52366.t1 | AT4G04750 | 26.895 | 409 | 275 | 6 | 82 | 483 | 76 | 467 | 4.34e-36 | 140 |
MS.gene52366.t1 | AT4G04750 | 26.895 | 409 | 275 | 6 | 82 | 483 | 76 | 467 | 4.34e-36 | 140 |
MS.gene52366.t1 | AT4G04760 | 27.654 | 405 | 275 | 5 | 82 | 483 | 71 | 460 | 6.63e-36 | 139 |
MS.gene52366.t1 | AT4G04750 | 26.895 | 409 | 275 | 6 | 82 | 483 | 120 | 511 | 8.34e-36 | 140 |
MS.gene52366.t1 | AT5G18840 | 25.558 | 403 | 287 | 4 | 82 | 483 | 84 | 474 | 1.18e-35 | 139 |
MS.gene52366.t1 | AT3G05150 | 28.501 | 407 | 270 | 6 | 82 | 483 | 75 | 465 | 1.81e-35 | 138 |
MS.gene52366.t1 | AT3G05150 | 28.501 | 407 | 270 | 6 | 82 | 483 | 75 | 465 | 1.81e-35 | 138 |
MS.gene52366.t1 | AT2G43330 | 28.499 | 393 | 267 | 9 | 107 | 492 | 99 | 484 | 1.95e-35 | 139 |
MS.gene52366.t1 | AT3G05150 | 28.501 | 407 | 270 | 6 | 82 | 483 | 75 | 465 | 2.16e-35 | 138 |
MS.gene52366.t1 | AT3G05155 | 25.248 | 404 | 284 | 7 | 82 | 483 | 67 | 454 | 3.36e-35 | 137 |
MS.gene52366.t1 | AT5G27360 | 25.250 | 400 | 287 | 4 | 84 | 483 | 77 | 464 | 3.63e-35 | 137 |
MS.gene52366.t1 | AT5G27360 | 25.250 | 400 | 287 | 4 | 84 | 483 | 125 | 512 | 6.36e-35 | 137 |
MS.gene52366.t1 | AT1G54730 | 27.642 | 369 | 218 | 9 | 82 | 442 | 72 | 399 | 1.46e-34 | 134 |
MS.gene52366.t1 | AT1G54730 | 28.363 | 342 | 215 | 8 | 82 | 414 | 72 | 392 | 2.36e-34 | 134 |
MS.gene52366.t1 | AT1G54730 | 28.363 | 342 | 215 | 8 | 82 | 414 | 72 | 392 | 2.36e-34 | 134 |
MS.gene52366.t1 | AT1G30220 | 31.609 | 348 | 206 | 8 | 34 | 374 | 39 | 361 | 3.20e-34 | 136 |
MS.gene52366.t1 | AT3G05165 | 26.034 | 411 | 273 | 5 | 16 | 426 | 23 | 402 | 4.43e-34 | 135 |
MS.gene52366.t1 | AT3G05165 | 26.034 | 411 | 273 | 5 | 16 | 426 | 23 | 402 | 1.42e-33 | 133 |
MS.gene52366.t1 | AT3G05165 | 26.034 | 411 | 273 | 5 | 16 | 426 | 23 | 402 | 1.42e-33 | 133 |
MS.gene52366.t1 | AT5G27360 | 25.352 | 355 | 253 | 4 | 129 | 483 | 18 | 360 | 3.94e-33 | 130 |
MS.gene52366.t1 | AT5G27360 | 25.352 | 355 | 253 | 4 | 129 | 483 | 18 | 360 | 3.94e-33 | 130 |
MS.gene52366.t1 | AT1G79820 | 26.877 | 413 | 271 | 11 | 83 | 485 | 97 | 488 | 5.99e-32 | 129 |
MS.gene52366.t1 | AT1G79820 | 26.877 | 413 | 271 | 11 | 83 | 485 | 97 | 488 | 5.99e-32 | 129 |
MS.gene52366.t1 | AT1G67300 | 28.256 | 407 | 257 | 11 | 92 | 485 | 103 | 487 | 6.97e-32 | 128 |
MS.gene52366.t1 | AT1G67300 | 28.256 | 407 | 257 | 11 | 92 | 485 | 103 | 487 | 6.97e-32 | 128 |
MS.gene52366.t1 | AT1G54730 | 29.496 | 278 | 172 | 6 | 82 | 351 | 72 | 333 | 1.56e-31 | 124 |
MS.gene52366.t1 | AT2G48020 | 27.915 | 283 | 195 | 3 | 82 | 363 | 68 | 342 | 1.82e-31 | 125 |
MS.gene52366.t1 | AT1G67300 | 27.966 | 354 | 225 | 9 | 92 | 435 | 103 | 436 | 7.62e-31 | 125 |
MS.gene52366.t1 | AT1G67300 | 27.966 | 354 | 225 | 9 | 92 | 435 | 103 | 436 | 7.62e-31 | 125 |
MS.gene52366.t1 | AT4G16480 | 30.172 | 348 | 215 | 7 | 34 | 371 | 38 | 367 | 8.54e-31 | 126 |
MS.gene52366.t1 | AT4G16480 | 30.172 | 348 | 215 | 7 | 34 | 371 | 38 | 367 | 8.54e-31 | 126 |
MS.gene52366.t1 | AT4G16480 | 30.172 | 348 | 215 | 7 | 34 | 371 | 38 | 367 | 8.54e-31 | 126 |
MS.gene52366.t1 | AT1G05030 | 25.160 | 469 | 313 | 12 | 21 | 483 | 77 | 513 | 1.49e-30 | 125 |
MS.gene52366.t1 | AT1G67300 | 28.010 | 407 | 259 | 11 | 92 | 485 | 103 | 488 | 2.33e-30 | 124 |
MS.gene52366.t1 | AT2G48020 | 27.174 | 276 | 193 | 2 | 82 | 357 | 68 | 335 | 2.86e-30 | 121 |
MS.gene52366.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 3.58e-30 | 120 |
MS.gene52366.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 3.58e-30 | 120 |
MS.gene52366.t1 | AT1G05030 | 26.238 | 404 | 276 | 9 | 87 | 483 | 73 | 461 | 4.68e-30 | 123 |
MS.gene52366.t1 | AT1G67300 | 28.909 | 339 | 211 | 9 | 92 | 420 | 103 | 421 | 5.33e-30 | 122 |
MS.gene52366.t1 | AT1G67300 | 28.909 | 339 | 211 | 9 | 92 | 420 | 103 | 421 | 5.33e-30 | 122 |
MS.gene52366.t1 | AT1G54730 | 30.040 | 253 | 156 | 5 | 82 | 326 | 72 | 311 | 7.06e-30 | 121 |
MS.gene52366.t1 | AT3G20460 | 24.814 | 403 | 289 | 6 | 82 | 483 | 93 | 482 | 6.77e-29 | 119 |
MS.gene52366.t1 | AT2G35740 | 26.437 | 348 | 230 | 5 | 34 | 372 | 37 | 367 | 1.59e-27 | 116 |
MS.gene52366.t1 | AT1G08920 | 23.775 | 408 | 287 | 6 | 82 | 483 | 72 | 461 | 2.56e-27 | 115 |
MS.gene52366.t1 | AT1G08920 | 22.906 | 406 | 300 | 5 | 82 | 483 | 72 | 468 | 3.70e-27 | 114 |
MS.gene52366.t1 | AT1G79820 | 26.966 | 356 | 238 | 10 | 83 | 433 | 97 | 435 | 1.06e-26 | 113 |
MS.gene52366.t1 | AT5G27360 | 23.442 | 337 | 246 | 4 | 84 | 420 | 77 | 401 | 9.39e-25 | 107 |
MS.gene52366.t1 | AT5G17010 | 25.826 | 484 | 248 | 14 | 21 | 483 | 42 | 435 | 1.34e-23 | 103 |
MS.gene52366.t1 | AT3G05155 | 23.985 | 271 | 193 | 4 | 82 | 351 | 67 | 325 | 1.50e-23 | 101 |
MS.gene52366.t1 | AT1G08920 | 23.647 | 351 | 244 | 6 | 82 | 426 | 72 | 404 | 1.63e-23 | 103 |
MS.gene52366.t1 | AT1G79820 | 25.799 | 407 | 235 | 11 | 83 | 485 | 97 | 440 | 1.10e-21 | 98.2 |
MS.gene52366.t1 | AT3G51490 | 31.915 | 188 | 124 | 4 | 87 | 272 | 2 | 187 | 1.04e-20 | 96.3 |
MS.gene52366.t1 | AT3G51490 | 27.155 | 232 | 150 | 6 | 262 | 481 | 440 | 664 | 2.93e-12 | 69.7 |
MS.gene52366.t1 | AT3G51490 | 31.915 | 188 | 124 | 4 | 87 | 272 | 52 | 237 | 1.30e-20 | 95.9 |
MS.gene52366.t1 | AT3G51490 | 31.915 | 188 | 124 | 4 | 87 | 272 | 52 | 237 | 1.34e-20 | 95.9 |
MS.gene52366.t1 | AT3G51490 | 27.155 | 232 | 150 | 6 | 262 | 481 | 490 | 714 | 2.87e-12 | 69.7 |
MS.gene52366.t1 | AT1G20840 | 27.749 | 191 | 135 | 3 | 90 | 278 | 52 | 241 | 3.84e-17 | 85.1 |
MS.gene52366.t1 | AT1G20840 | 27.749 | 191 | 135 | 3 | 90 | 278 | 52 | 241 | 3.84e-17 | 85.1 |
MS.gene52366.t1 | AT1G79820 | 25.753 | 365 | 204 | 11 | 125 | 485 | 77 | 378 | 6.21e-17 | 83.2 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.16e-16 | 82.4 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 508 | 710 | 7.73e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.16e-16 | 82.4 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 508 | 710 | 7.73e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.16e-16 | 82.4 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 508 | 710 | 7.73e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.37e-16 | 82.0 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 518 | 720 | 9.59e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.37e-16 | 82.0 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 518 | 720 | 9.59e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.37e-16 | 82.0 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 518 | 720 | 9.59e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.37e-16 | 82.0 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 518 | 720 | 9.59e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.37e-16 | 82.0 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 518 | 720 | 9.59e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.37e-16 | 82.0 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 518 | 720 | 9.59e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 32.184 | 174 | 114 | 4 | 87 | 258 | 52 | 223 | 3.37e-16 | 82.0 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 518 | 720 | 9.59e-11 | 65.1 |
MS.gene52366.t1 | AT4G35300 | 27.830 | 212 | 131 | 6 | 283 | 481 | 321 | 523 | 7.39e-11 | 65.1 |
Find 113 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTCTTGTTCTATGCATTT+TGG | 0.096323 | 3.1:+60883400 | MS.gene52366:CDS |
GGTCGTATTCTTCTTGGTTT+TGG | 0.158443 | 3.1:+60881885 | MS.gene52366:CDS |
TGGAGTCAATGTACATTATA+TGG | 0.160882 | 3.1:+60883481 | MS.gene52366:CDS |
CTTGCTGGTGCTGCTATTAA+TGG | 0.180124 | 3.1:+60881831 | MS.gene52366:CDS |
GGATATGACATTGGGATTTC+AGG | 0.189475 | 3.1:+60881085 | MS.gene52366:CDS |
TTACTTTCTGCCGTTATTCT+TGG | 0.197875 | 3.1:+60882774 | MS.gene52366:CDS |
TGTTTCTATGCCGCAGGTTT+TGG | 0.241160 | 3.1:+60883219 | MS.gene52366:CDS |
ATTCTTGGTCGTATTCTTCT+TGG | 0.241656 | 3.1:+60881879 | MS.gene52366:CDS |
CTCTTTCAATCTGTGGGTTT+AGG | 0.277247 | 3.1:+60882738 | MS.gene52366:CDS |
GGTGGTGCCATCTTTCTTGC+TGG | 0.282200 | 3.1:+60881816 | MS.gene52366:CDS |
CTCTCAAAGATGGTCATAAA+TGG | 0.284366 | 3.1:-60882624 | None:intergenic |
TTTGCAATGCTTTCCTGGCT+TGG | 0.290814 | 3.1:-60882515 | None:intergenic |
CATTCTATTGCTTGTCTGTC+TGG | 0.306011 | 3.1:+60882878 | MS.gene52366:CDS |
AATATTGCTATGCTCATTCT+TGG | 0.318012 | 3.1:+60881864 | MS.gene52366:CDS |
TATGGGGCAAACATTGGTTT+TGG | 0.323870 | 3.1:+60883499 | MS.gene52366:CDS |
CTGAAAGCACCTCGCCATTT+TGG | 0.328065 | 3.1:-60882303 | None:intergenic |
GCACCTTCCAATGGCTTTGA+TGG | 0.330273 | 3.1:+60881001 | MS.gene52366:CDS |
CTGAAATCGCTCCACCAAAA+TGG | 0.334485 | 3.1:+60882289 | MS.gene52366:CDS |
ATGCTATGCCACTTCAAGTT+TGG | 0.341229 | 3.1:+60883375 | MS.gene52366:CDS |
CGAAGATTCTTGTTCATTAC+GGG | 0.343244 | 3.1:+60882852 | MS.gene52366:CDS |
GCATCTAGTGGACTCATTCT+TGG | 0.350307 | 3.1:+60881064 | MS.gene52366:CDS |
CGCCAACTCCTATGAAGAAT+TGG | 0.355831 | 3.1:-60882335 | None:intergenic |
GGTCTTGGGGCCCACTCACC+TGG | 0.356458 | 3.1:+60883244 | MS.gene52366:CDS |
TCGAAGATTCTTGTTCATTA+CGG | 0.369531 | 3.1:+60882851 | MS.gene52366:CDS |
GGAGTCAATGTACATTATAT+GGG | 0.376356 | 3.1:+60883482 | MS.gene52366:CDS |
ACAGGCTTCCAATTCTTCAT+AGG | 0.386056 | 3.1:+60882327 | MS.gene52366:CDS |
GGTGTCTGCTTTGCTAGCTT+TGG | 0.387628 | 3.1:+60883131 | MS.gene52366:CDS |
GCTGCCTTTCTTAGAATATC+CGG | 0.392951 | 3.1:-60881648 | None:intergenic |
ATTTCTCAATAAATTCTTCC+CGG | 0.399065 | 3.1:+60881629 | MS.gene52366:CDS |
GCTTTGGCGACTGGTGTTGA+TGG | 0.405109 | 3.1:+60883147 | MS.gene52366:CDS |
ACCAACTGCTATACTTTGTC+CGG | 0.407613 | 3.1:-60883307 | None:intergenic |
GGGAAGAATTTATTGAGAAA+TGG | 0.413138 | 3.1:-60881627 | None:intergenic |
TGGGGCTGGCGACTCTCTCT+TGG | 0.414296 | 3.1:+60882402 | MS.gene52366:CDS |
TGACTCCAAAGCAATTCCTT+TGG | 0.421772 | 3.1:-60883466 | None:intergenic |
GCCACGTTCAACCAAGCTGC+TGG | 0.422123 | 3.1:-60882484 | None:intergenic |
AAAGCAATTCCTTTGGTCTC+AGG | 0.428168 | 3.1:-60883459 | None:intergenic |
GCTTTGCTAGCTTTGGCGAC+TGG | 0.429820 | 3.1:+60883138 | MS.gene52366:CDS |
CCCACAGATTGAAAGAGGTT+TGG | 0.431157 | 3.1:-60882732 | None:intergenic |
GGGCAATGCAACATTAGTAT+TGG | 0.438296 | 3.1:+60883188 | MS.gene52366:CDS |
CTCATTCTTGGATATGACAT+TGG | 0.445169 | 3.1:+60881076 | MS.gene52366:CDS |
TCATTCTTGGATATGACATT+GGG | 0.445844 | 3.1:+60881077 | MS.gene52366:CDS |
TGAGACCAAAGGAATTGCTT+TGG | 0.446229 | 3.1:+60883461 | MS.gene52366:CDS |
CCTGCAGCCGTGATGACAAT+TGG | 0.446393 | 3.1:+60882438 | MS.gene52366:CDS |
CTTAATGAGTTCTTCTAACT+CGG | 0.449686 | 3.1:-60882568 | None:intergenic |
CTAAACCCACAGATTGAAAG+AGG | 0.452624 | 3.1:-60882737 | None:intergenic |
GCCATTGGAAGGTGCATCAA+TGG | 0.461494 | 3.1:-60880993 | None:intergenic |
GCCATTGATGCACCTTCCAA+TGG | 0.471156 | 3.1:+60880992 | MS.gene52366:CDS |
CTTCCCGGATATTCTAAGAA+AGG | 0.471446 | 3.1:+60881644 | MS.gene52366:CDS |
TTCCAATTCTTCATAGGAGT+TGG | 0.473326 | 3.1:+60882333 | MS.gene52366:CDS |
CCAAACCTCTTTCAATCTGT+GGG | 0.474306 | 3.1:+60882732 | MS.gene52366:CDS |
CCAATTGTCATCACGGCTGC+AGG | 0.478121 | 3.1:-60882438 | None:intergenic |
ACCAAACCTCTTTCAATCTG+TGG | 0.482629 | 3.1:+60882731 | MS.gene52366:CDS |
CGAAGAAATACCATCGTGTT+GGG | 0.482762 | 3.1:+60881795 | MS.gene52366:CDS |
TCGCCAGCCCCATGTGTGCT+TGG | 0.486469 | 3.1:-60882391 | None:intergenic |
TGGCGAGGTGCTTTCAGCAC+AGG | 0.490579 | 3.1:+60882309 | MS.gene52366:CDS |
TTACTATGTTTCTATGCCGC+AGG | 0.496329 | 3.1:+60883213 | MS.gene52366:CDS |
TATCTTTCCATCAAAGCCAT+TGG | 0.503256 | 3.1:-60881008 | None:intergenic |
AATTTCACTTGGAATTAGCC+AGG | 0.504907 | 3.1:-60883262 | None:intergenic |
AGCAAAGTCACTGCAGCAAT+CGG | 0.505312 | 3.1:+60881771 | MS.gene52366:CDS |
CTGCCAAGCACACATGGGGC+TGG | 0.506056 | 3.1:+60882388 | MS.gene52366:CDS |
GCGATTTCAGAAAGGTATAG+TGG | 0.506465 | 3.1:-60882276 | None:intergenic |
CGACAAAAGCAGTTGAGACT+AGG | 0.517339 | 3.1:-60882818 | None:intergenic |
ACGTGACTGCCAAGCACACA+TGG | 0.517471 | 3.1:+60882382 | MS.gene52366:CDS |
CTGCCTTTCTTAGAATATCC+GGG | 0.528095 | 3.1:-60881647 | None:intergenic |
AGTTAGAAGAACTCATTAAG+TGG | 0.530071 | 3.1:+60882571 | MS.gene52366:CDS |
TGCTGGGTGTGTCGGATATG+AGG | 0.531185 | 3.1:-60882467 | None:intergenic |
AGGTTGAAAATGGCAGGTGG+AGG | 0.531701 | 3.1:+60880965 | None:intergenic |
ACATTATATGGGGCAAACAT+TGG | 0.535333 | 3.1:+60883493 | MS.gene52366:CDS |
AACCAAGCTGCTGGGTGTGT+CGG | 0.542991 | 3.1:-60882475 | None:intergenic |
AGCAGCACCAGCAAGAAAGA+TGG | 0.549935 | 3.1:-60881823 | None:intergenic |
TGTATCGTTGCTGCATCTAG+TGG | 0.552864 | 3.1:+60881052 | MS.gene52366:CDS |
AGGACAAGGTTGAAAATGGC+AGG | 0.553852 | 3.1:+60880959 | None:intergenic |
TCGATATTGTCTCTCAAAGA+TGG | 0.553960 | 3.1:-60882634 | None:intergenic |
TCGAAGAAATACCATCGTGT+TGG | 0.559517 | 3.1:+60881794 | MS.gene52366:CDS |
ATATCGACCTCACTTAATCA+TGG | 0.560389 | 3.1:+60882650 | MS.gene52366:CDS |
ATCCGACACACCCAGCAGCT+TGG | 0.562187 | 3.1:+60882473 | MS.gene52366:CDS |
AGAAAGCACCAAACTTGAAG+TGG | 0.564619 | 3.1:-60883383 | None:intergenic |
CCACGTTCAACCAAGCTGCT+GGG | 0.564694 | 3.1:-60882483 | None:intergenic |
GGTACAAAGGACATGTCAAA+GGG | 0.571326 | 3.1:+60883168 | MS.gene52366:CDS |
GTGGCATGATAGACCAAGCC+AGG | 0.572272 | 3.1:+60882502 | MS.gene52366:CDS |
TTAATGAGTTCTTCTAACTC+GGG | 0.576345 | 3.1:-60882567 | None:intergenic |
TTGGTGGAGCGATTTCAGAA+AGG | 0.579554 | 3.1:-60882284 | None:intergenic |
TTTAAGGGGAAAATTTCACT+TGG | 0.579987 | 3.1:-60883273 | None:intergenic |
GGTTGAAAATGGCAGGTGGA+GGG | 0.582573 | 3.1:+60880966 | None:intergenic |
TAACTCGGGCTCAACATCGA+TGG | 0.583460 | 3.1:-60882553 | None:intergenic |
TGGTACAAAGGACATGTCAA+AGG | 0.584833 | 3.1:+60883167 | MS.gene52366:CDS |
TTTCCATCAAAGCCATTGGA+AGG | 0.597415 | 3.1:-60881004 | None:intergenic |
TTGGAATTAGCCAGGTGAGT+GGG | 0.599809 | 3.1:-60883254 | None:intergenic |
GAGTCAATGTACATTATATG+GGG | 0.599950 | 3.1:+60883483 | MS.gene52366:CDS |
CCCAGCAGCTTGGTTGAACG+TGG | 0.607250 | 3.1:+60882483 | MS.gene52366:CDS |
GTTGACGAGTCCAAGAATAA+CGG | 0.609102 | 3.1:-60882784 | None:intergenic |
AGATTCTTGTTCATTACGGG+TGG | 0.611668 | 3.1:+60882855 | MS.gene52366:CDS |
GAAGGCACCAATTGTCATCA+CGG | 0.622211 | 3.1:-60882445 | None:intergenic |
AAAAGCAGTTGAGACTAGGA+TGG | 0.625099 | 3.1:-60882814 | None:intergenic |
GATATTCTAAGAAAGGCAGC+TGG | 0.631809 | 3.1:+60881651 | MS.gene52366:CDS |
CGTGACTGCCAAGCACACAT+GGG | 0.636076 | 3.1:+60882383 | MS.gene52366:CDS |
ACTCTCTCTTGGACTAGCAG+TGG | 0.636345 | 3.1:+60882413 | MS.gene52366:CDS |
TTCAGGAGGTGTTACAACAA+TGG | 0.637356 | 3.1:+60881602 | MS.gene52366:intron |
ATTCTTCATAGGAGTTGGCG+TGG | 0.640365 | 3.1:+60882338 | MS.gene52366:CDS |
ATCGCTCCACCAAAATGGCG+AGG | 0.643724 | 3.1:+60882294 | MS.gene52366:CDS |
GCTGGTGCTGCTATTAATGG+CGG | 0.645779 | 3.1:+60881834 | MS.gene52366:CDS |
AGAAATACCATCGTGTTGGG+TGG | 0.646781 | 3.1:+60881798 | MS.gene52366:CDS |
ACCGGACAAAGTATAGCAGT+TGG | 0.647540 | 3.1:+60883306 | MS.gene52366:CDS |
CCAAGACCAACCAAAACCTG+CGG | 0.648887 | 3.1:-60883229 | None:intergenic |
TCTGTGGGTTTAGGAAACAA+TGG | 0.653625 | 3.1:+60882747 | MS.gene52366:CDS |
CTTGGAATTAGCCAGGTGAG+TGG | 0.659267 | 3.1:-60883255 | None:intergenic |
TTGAGACTAGGATGGAAGCA+AGG | 0.659590 | 3.1:-60882806 | None:intergenic |
ACAAGGTTGAAAATGGCAGG+TGG | 0.665030 | 3.1:+60880962 | None:intergenic |
GCAAATGCCATGATTAAGTG+AGG | 0.668086 | 3.1:-60882657 | None:intergenic |
GGGTGTGTCGGATATGAGGA+AGG | 0.669650 | 3.1:-60882463 | None:intergenic |
GTGACTGCCAAGCACACATG+GGG | 0.687081 | 3.1:+60882384 | MS.gene52366:CDS |
GATGGCACCACCCAACACGA+TGG | 0.695361 | 3.1:-60881805 | None:intergenic |
GACTGGTGTTGATGGTACAA+AGG | 0.706853 | 3.1:+60883155 | MS.gene52366:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAGTTAAACTAAAAAAA+GGG | - | chr3.1:60882028-60882047 | None:intergenic | 10.0% |
!! | TAAATATTATTATACACATA+TGG | - | chr3.1:60882920-60882939 | None:intergenic | 10.0% |
!! | TTTATAATGAAAAAACAAAA+AGG | - | chr3.1:60881118-60881137 | None:intergenic | 10.0% |
!! | AAAAGTTAAACTAAAAAAAG+GGG | - | chr3.1:60882027-60882046 | None:intergenic | 15.0% |
!! | CTAAAAGTTAAACTAAAAAA+AGG | - | chr3.1:60882029-60882048 | None:intergenic | 15.0% |
!!! | AACATTTTTCATTAGTAAAA+AGG | - | chr3.1:60881576-60881595 | None:intergenic | 15.0% |
!!! | ACATTTTTCATTAGTAAAAA+GGG | - | chr3.1:60881575-60881594 | None:intergenic | 15.0% |
!!! | AGTAGAAAGATTTTAAATAA+AGG | - | chr3.1:60882177-60882196 | None:intergenic | 15.0% |
!! | TAGATGGAGAAATTAAAATA+AGG | - | chr3.1:60883048-60883067 | None:intergenic | 20.0% |
!! | TGAAAAATGTTATCAAATTC+AGG | + | chr3.1:60881585-60881604 | MS.gene52366:intron | 20.0% |
!! | TTAGTAGTACAAATCTAAAT+AGG | + | chr3.1:60881457-60881476 | MS.gene52366:intron | 20.0% |
!!! | AACATTGCTATTTAAAATTG+CGG | - | chr3.1:60882052-60882071 | None:intergenic | 20.0% |
!!! | AAGCAAATTCATTTTAAACA+TGG | - | chr3.1:60882218-60882237 | None:intergenic | 20.0% |
!!! | TTTTATCTTCAAAATGTACT+TGG | + | chr3.1:60881524-60881543 | MS.gene52366:intron | 20.0% |
! | AAAATGTTATCAAATTCAGG+AGG | + | chr3.1:60881588-60881607 | MS.gene52366:intron | 25.0% |
! | AGTACAAATCTAAATAGGTT+TGG | + | chr3.1:60881462-60881481 | MS.gene52366:intron | 25.0% |
! | ATATAACTCGAGAATTAAAC+TGG | + | chr3.1:60881315-60881334 | MS.gene52366:intron | 25.0% |
! | ATTGTATTACATGATGCAAT+TGG | + | chr3.1:60882242-60882261 | MS.gene52366:intron | 25.0% |
! | ATTTCTCAATAAATTCTTCC+CGG | + | chr3.1:60881629-60881648 | MS.gene52366:CDS | 25.0% |
! | TAAACTAAAAAAAGGGGAAA+TGG | - | chr3.1:60882021-60882040 | None:intergenic | 25.0% |
! | TAAAGGATGCTATCAAAATT+TGG | - | chr3.1:60882160-60882179 | None:intergenic | 25.0% |
! | TAAGGACGAAAATTTAGATA+CGG | - | chr3.1:60883030-60883049 | None:intergenic | 25.0% |
!! | TTTCTTGTTCTATGCATTTT+GGG | + | chr3.1:60883401-60883420 | MS.gene52366:CDS | 25.0% |
!!! | TTTTATTTTGTTGACGATGT+TGG | - | chr3.1:60881972-60881991 | None:intergenic | 25.0% |
AATATTGCTATGCTCATTCT+TGG | + | chr3.1:60881864-60881883 | MS.gene52366:CDS | 30.0% | |
AATTAACTACAGAAAGATCG+TGG | + | chr3.1:60882990-60883009 | MS.gene52366:intron | 30.0% | |
AGATCACTATTTGAATCACA+TGG | + | chr3.1:60881272-60881291 | MS.gene52366:intron | 30.0% | |
AGCAAAAAACATGCTCTAAT+TGG | - | chr3.1:60881145-60881164 | None:intergenic | 30.0% | |
AGTTAGAAGAACTCATTAAG+TGG | + | chr3.1:60882571-60882590 | MS.gene52366:CDS | 30.0% | |
ATTATTAGTACCAATACCAC+AGG | - | chr3.1:60883080-60883099 | None:intergenic | 30.0% | |
CCTGTAAACTGTTGAAAAAA+CGG | - | chr3.1:60882687-60882706 | None:intergenic | 30.0% | |
CTGTAAACTGTTGAAAAAAC+GGG | - | chr3.1:60882686-60882705 | None:intergenic | 30.0% | |
CTTAATGAGTTCTTCTAACT+CGG | - | chr3.1:60882571-60882590 | None:intergenic | 30.0% | |
GAGTCAATGTACATTATATG+GGG | + | chr3.1:60883483-60883502 | MS.gene52366:CDS | 30.0% | |
GCATAAATATCATAACCTTG+TGG | + | chr3.1:60882133-60882152 | MS.gene52366:intron | 30.0% | |
GGAGTCAATGTACATTATAT+GGG | + | chr3.1:60883482-60883501 | MS.gene52366:CDS | 30.0% | |
GGGAAGAATTTATTGAGAAA+TGG | - | chr3.1:60881630-60881649 | None:intergenic | 30.0% | |
TCATTCTTGGATATGACATT+GGG | + | chr3.1:60881077-60881096 | MS.gene52366:CDS | 30.0% | |
TCGAAGATTCTTGTTCATTA+CGG | + | chr3.1:60882851-60882870 | MS.gene52366:CDS | 30.0% | |
TGATTCAAATAGTGATCTAC+TGG | - | chr3.1:60881270-60881289 | None:intergenic | 30.0% | |
TGGAGTCAATGTACATTATA+TGG | + | chr3.1:60883481-60883500 | MS.gene52366:CDS | 30.0% | |
TTAATGAGTTCTTCTAACTC+GGG | - | chr3.1:60882570-60882589 | None:intergenic | 30.0% | |
TTACATGATGCAATTGGAAA+AGG | + | chr3.1:60882248-60882267 | MS.gene52366:intron | 30.0% | |
TTTAAGGGGAAAATTTCACT+TGG | - | chr3.1:60883276-60883295 | None:intergenic | 30.0% | |
! | ATCTTTAAGAACAAGAATCG+TGG | - | chr3.1:60882076-60882095 | None:intergenic | 30.0% |
! | CTTTCTTGTTCTATGCATTT+TGG | + | chr3.1:60883400-60883419 | MS.gene52366:CDS | 30.0% |
!! | AAAGCATTGCAAAAAATCAG+AGG | + | chr3.1:60882525-60882544 | MS.gene52366:CDS | 30.0% |
!!! | CGTTTTTTCAACAGTTTACA+GGG | + | chr3.1:60882685-60882704 | MS.gene52366:CDS | 30.0% |
AATTTCACTTGGAATTAGCC+AGG | - | chr3.1:60883265-60883284 | None:intergenic | 35.0% | |
ACATTATATGGGGCAAACAT+TGG | + | chr3.1:60883493-60883512 | MS.gene52366:CDS | 35.0% | |
AGTCATTATACCTGTGGTAT+TGG | + | chr3.1:60883067-60883086 | MS.gene52366:intron | 35.0% | |
ATATCGACCTCACTTAATCA+TGG | + | chr3.1:60882650-60882669 | MS.gene52366:CDS | 35.0% | |
ATTCTTGGTCGTATTCTTCT+TGG | + | chr3.1:60881879-60881898 | MS.gene52366:CDS | 35.0% | |
CCCTTAAAAATCAGAACAAC+CGG | + | chr3.1:60883288-60883307 | MS.gene52366:CDS | 35.0% | |
CGAAGATTCTTGTTCATTAC+GGG | + | chr3.1:60882852-60882871 | MS.gene52366:CDS | 35.0% | |
CTATCAAAATTTGGACCACA+AGG | - | chr3.1:60882151-60882170 | None:intergenic | 35.0% | |
CTCATTCTTGGATATGACAT+TGG | + | chr3.1:60881076-60881095 | MS.gene52366:CDS | 35.0% | |
CTCTCAAAGATGGTCATAAA+TGG | - | chr3.1:60882627-60882646 | None:intergenic | 35.0% | |
GATCAATCATTGTTGTATCG+TGG | + | chr3.1:60882102-60882121 | MS.gene52366:intron | 35.0% | |
TATCTTTCCATCAAAGCCAT+TGG | - | chr3.1:60881011-60881030 | None:intergenic | 35.0% | |
TCGATATTGTCTCTCAAAGA+TGG | - | chr3.1:60882637-60882656 | None:intergenic | 35.0% | |
TTACTTTCTGCCGTTATTCT+TGG | + | chr3.1:60882774-60882793 | MS.gene52366:CDS | 35.0% | |
TTCCAATTCTTCATAGGAGT+TGG | + | chr3.1:60882333-60882352 | MS.gene52366:CDS | 35.0% | |
! | CCGGTTGTTCTGATTTTTAA+GGG | - | chr3.1:60883291-60883310 | None:intergenic | 35.0% |
! | TCCGGTTGTTCTGATTTTTA+AGG | - | chr3.1:60883292-60883311 | None:intergenic | 35.0% |
! | TTCTTTTTACCTGAGACCAA+AGG | + | chr3.1:60883450-60883469 | MS.gene52366:CDS | 35.0% |
!! | CGGTTGTTCTGATTTTTAAG+GGG | - | chr3.1:60883290-60883309 | None:intergenic | 35.0% |
!! | GTCGTATTCTTCTTGGTTTT+GGG | + | chr3.1:60881886-60881905 | MS.gene52366:CDS | 35.0% |
!!! | ATTCTTCTTGGTTTTGGGAT+CGG | + | chr3.1:60881891-60881910 | MS.gene52366:CDS | 35.0% |
!!! | CCGTTTTTTCAACAGTTTAC+AGG | + | chr3.1:60882684-60882703 | MS.gene52366:CDS | 35.0% |
!!! | GATTTTTTGCAATGCTTTCC+TGG | - | chr3.1:60882523-60882542 | None:intergenic | 35.0% |
AAAAGCAGTTGAGACTAGGA+TGG | - | chr3.1:60882817-60882836 | None:intergenic | 40.0% | |
AAAGCAATTCCTTTGGTCTC+AGG | - | chr3.1:60883462-60883481 | None:intergenic | 40.0% | |
ACAGGCTTCCAATTCTTCAT+AGG | + | chr3.1:60882327-60882346 | MS.gene52366:CDS | 40.0% | |
ACCAAACCTCTTTCAATCTG+TGG | + | chr3.1:60882731-60882750 | MS.gene52366:CDS | 40.0% | |
ACCAACTGCTATACTTTGTC+CGG | - | chr3.1:60883310-60883329 | None:intergenic | 40.0% | |
AGATTCTTGTTCATTACGGG+TGG | + | chr3.1:60882855-60882874 | MS.gene52366:CDS | 40.0% | |
CATGATGCAATTGGAAAAGG+CGG | + | chr3.1:60882251-60882270 | MS.gene52366:intron | 40.0% | |
CATTCTATTGCTTGTCTGTC+TGG | + | chr3.1:60882878-60882897 | MS.gene52366:CDS | 40.0% | |
CCAAACCTCTTTCAATCTGT+GGG | + | chr3.1:60882732-60882751 | MS.gene52366:CDS | 40.0% | |
CCACAGGTATAATGACTAGA+TGG | - | chr3.1:60883064-60883083 | None:intergenic | 40.0% | |
CCATCTAGTCATTATACCTG+TGG | + | chr3.1:60883061-60883080 | MS.gene52366:intron | 40.0% | |
CGAAGAAATACCATCGTGTT+GGG | + | chr3.1:60881795-60881814 | MS.gene52366:CDS | 40.0% | |
CTAAACCCACAGATTGAAAG+AGG | - | chr3.1:60882740-60882759 | None:intergenic | 40.0% | |
CTCTTTCAATCTGTGGGTTT+AGG | + | chr3.1:60882738-60882757 | MS.gene52366:CDS | 40.0% | |
CTGCCTTTCTTAGAATATCC+GGG | - | chr3.1:60881650-60881669 | None:intergenic | 40.0% | |
GCAAATGCCATGATTAAGTG+AGG | - | chr3.1:60882660-60882679 | None:intergenic | 40.0% | |
GCTGCCTTTCTTAGAATATC+CGG | - | chr3.1:60881651-60881670 | None:intergenic | 40.0% | |
GGATATGACATTGGGATTTC+AGG | + | chr3.1:60881085-60881104 | MS.gene52366:CDS | 40.0% | |
GGGCAATGCAACATTAGTAT+TGG | + | chr3.1:60883188-60883207 | MS.gene52366:CDS | 40.0% | |
GGTACAAAGGACATGTCAAA+GGG | + | chr3.1:60883168-60883187 | MS.gene52366:CDS | 40.0% | |
GTTGACGAGTCCAAGAATAA+CGG | - | chr3.1:60882787-60882806 | None:intergenic | 40.0% | |
TCGAAGAAATACCATCGTGT+TGG | + | chr3.1:60881794-60881813 | MS.gene52366:CDS | 40.0% | |
TCTGTGGGTTTAGGAAACAA+TGG | + | chr3.1:60882747-60882766 | MS.gene52366:CDS | 40.0% | |
TGACTCCAAAGCAATTCCTT+TGG | - | chr3.1:60883469-60883488 | None:intergenic | 40.0% | |
TGAGACCAAAGGAATTGCTT+TGG | + | chr3.1:60883461-60883480 | MS.gene52366:CDS | 40.0% | |
TGGTACAAAGGACATGTCAA+AGG | + | chr3.1:60883167-60883186 | MS.gene52366:CDS | 40.0% | |
TTTCCATCAAAGCCATTGGA+AGG | - | chr3.1:60881007-60881026 | None:intergenic | 40.0% | |
! | AAGGGTGAGCTTTATGACTT+TGG | - | chr3.1:60881557-60881576 | None:intergenic | 40.0% |
! | ATGCTATGCCACTTCAAGTT+TGG | + | chr3.1:60883375-60883394 | MS.gene52366:CDS | 40.0% |
! | CTTCCCGGATATTCTAAGAA+AGG | + | chr3.1:60881644-60881663 | MS.gene52366:CDS | 40.0% |
! | GATATTCTAAGAAAGGCAGC+TGG | + | chr3.1:60881651-60881670 | MS.gene52366:CDS | 40.0% |
! | GATCTACTGGTTAGTGACTT+TGG | - | chr3.1:60881257-60881276 | None:intergenic | 40.0% |
! | GCGATTTCAGAAAGGTATAG+TGG | - | chr3.1:60882279-60882298 | None:intergenic | 40.0% |
! | GGTCGTATTCTTCTTGGTTT+TGG | + | chr3.1:60881885-60881904 | MS.gene52366:CDS | 40.0% |
! | TTACTATGTTTCTATGCCGC+AGG | + | chr3.1:60883213-60883232 | MS.gene52366:CDS | 40.0% |
!! | AGAAAGCACCAAACTTGAAG+TGG | - | chr3.1:60883386-60883405 | None:intergenic | 40.0% |
!! | GTTGACGCTTTGAAAGATTG+CGG | + | chr3.1:60883110-60883129 | MS.gene52366:intron | 40.0% |
!! | TCTCAACTGCTTTTGTCGAT+CGG | + | chr3.1:60882823-60882842 | MS.gene52366:CDS | 40.0% |
!! | TTCAGGAGGTGTTACAACAA+TGG | + | chr3.1:60881602-60881621 | MS.gene52366:intron | 40.0% |
!!! | TATGGGGCAAACATTGGTTT+TGG | + | chr3.1:60883499-60883518 | MS.gene52366:CDS | 40.0% |
ACCGGACAAAGTATAGCAGT+TGG | + | chr3.1:60883306-60883325 | MS.gene52366:CDS | 45.0% | |
AGAAATACCATCGTGTTGGG+TGG | + | chr3.1:60881798-60881817 | MS.gene52366:CDS | 45.0% | |
AGCAAAGTCACTGCAGCAAT+CGG | + | chr3.1:60881771-60881790 | MS.gene52366:CDS | 45.0% | |
ATTCTTCATAGGAGTTGGCG+TGG | + | chr3.1:60882338-60882357 | MS.gene52366:CDS | 45.0% | |
ATTGTTGTATCGTGGTCGCT+GGG | + | chr3.1:60882110-60882129 | MS.gene52366:intron | 45.0% | |
CCCACAGATTGAAAGAGGTT+TGG | - | chr3.1:60882735-60882754 | None:intergenic | 45.0% | |
CGACAAAAGCAGTTGAGACT+AGG | - | chr3.1:60882821-60882840 | None:intergenic | 45.0% | |
CGCCAACTCCTATGAAGAAT+TGG | - | chr3.1:60882338-60882357 | None:intergenic | 45.0% | |
CTGAAATCGCTCCACCAAAA+TGG | + | chr3.1:60882289-60882308 | MS.gene52366:CDS | 45.0% | |
TGTATCGTTGCTGCATCTAG+TGG | + | chr3.1:60881052-60881071 | MS.gene52366:CDS | 45.0% | |
TTGAGACTAGGATGGAAGCA+AGG | - | chr3.1:60882809-60882828 | None:intergenic | 45.0% | |
TTGGAATTAGCCAGGTGAGT+GGG | - | chr3.1:60883257-60883276 | None:intergenic | 45.0% | |
TTGGTGGAGCGATTTCAGAA+AGG | - | chr3.1:60882287-60882306 | None:intergenic | 45.0% | |
TTTGCAATGCTTTCCTGGCT+TGG | - | chr3.1:60882518-60882537 | None:intergenic | 45.0% | |
!! | ACTGCTTTTGTCGATCGGTT+TGG | + | chr3.1:60882828-60882847 | MS.gene52366:CDS | 45.0% |
!! | CTTGCTGGTGCTGCTATTAA+TGG | + | chr3.1:60881831-60881850 | MS.gene52366:CDS | 45.0% |
!! | GAAGGCACCAATTGTCATCA+CGG | - | chr3.1:60882448-60882467 | None:intergenic | 45.0% |
!! | GACTGGTGTTGATGGTACAA+AGG | + | chr3.1:60883155-60883174 | MS.gene52366:CDS | 45.0% |
!! | GCATCTAGTGGACTCATTCT+TGG | + | chr3.1:60881064-60881083 | MS.gene52366:CDS | 45.0% |
!! | TGTTTCTATGCCGCAGGTTT+TGG | + | chr3.1:60883219-60883238 | MS.gene52366:CDS | 45.0% |
!!! | TTTTGGCGGCGGTTTGTTAA+AGG | + | chr3.1:60883516-60883535 | MS.gene52366:CDS | 45.0% |
!! | TTATATTTATTTATTATTCT+AGG | + | chr3.1:60882937-60882956 | MS.gene52366:intron | 5.0% |
AGCAGCACCAGCAAGAAAGA+TGG | - | chr3.1:60881826-60881845 | None:intergenic | 50.0% | |
CATTGTTGTATCGTGGTCGC+TGG | + | chr3.1:60882109-60882128 | MS.gene52366:intron | 50.0% | |
CCAAGACCAACCAAAACCTG+CGG | - | chr3.1:60883232-60883251 | None:intergenic | 50.0% | |
CTTGGAATTAGCCAGGTGAG+TGG | - | chr3.1:60883258-60883277 | None:intergenic | 50.0% | |
GCCATTGATGCACCTTCCAA+TGG | + | chr3.1:60880992-60881011 | MS.gene52366:CDS | 50.0% | |
GGTTAGTGACTTTGGCGAGT+CGG | - | chr3.1:60881249-60881268 | None:intergenic | 50.0% | |
TAACTCGGGCTCAACATCGA+TGG | - | chr3.1:60882556-60882575 | None:intergenic | 50.0% | |
TTGTTGTATCGTGGTCGCTG+GGG | + | chr3.1:60882111-60882130 | MS.gene52366:intron | 50.0% | |
! | GCCATTGGAAGGTGCATCAA+TGG | - | chr3.1:60880996-60881015 | None:intergenic | 50.0% |
! | GGTGTCTGCTTTGCTAGCTT+TGG | + | chr3.1:60883131-60883150 | MS.gene52366:CDS | 50.0% |
!! | AAAGCACCTCGCCATTTTGG+TGG | - | chr3.1:60882303-60882322 | None:intergenic | 50.0% |
!! | ACTCTCTCTTGGACTAGCAG+TGG | + | chr3.1:60882413-60882432 | MS.gene52366:CDS | 50.0% |
!! | GCACCTTCCAATGGCTTTGA+TGG | + | chr3.1:60881001-60881020 | MS.gene52366:CDS | 50.0% |
!! | GCTGGTGCTGCTATTAATGG+CGG | + | chr3.1:60881834-60881853 | MS.gene52366:CDS | 50.0% |
!! | TCTATGCCGCAGGTTTTGGT+TGG | + | chr3.1:60883223-60883242 | MS.gene52366:CDS | 50.0% |
!!! | CGCAGGTTTTGGTTGGTCTT+GGG | + | chr3.1:60883230-60883249 | MS.gene52366:CDS | 50.0% |
!!! | CTGAAAGCACCTCGCCATTT+TGG | - | chr3.1:60882306-60882325 | None:intergenic | 50.0% |
!!! | GCAAACATTGGTTTTGGCGG+CGG | + | chr3.1:60883505-60883524 | MS.gene52366:CDS | 50.0% |
!!! | GCAGGTTTTGGTTGGTCTTG+GGG | + | chr3.1:60883231-60883250 | MS.gene52366:CDS | 50.0% |
!!! | GGGGCAAACATTGGTTTTGG+CGG | + | chr3.1:60883502-60883521 | MS.gene52366:CDS | 50.0% |
AACCAAGCTGCTGGGTGTGT+CGG | - | chr3.1:60882478-60882497 | None:intergenic | 55.0% | |
ACGTGACTGCCAAGCACACA+TGG | + | chr3.1:60882382-60882401 | MS.gene52366:CDS | 55.0% | |
ATCGCTCCACCAAAATGGCG+AGG | + | chr3.1:60882294-60882313 | MS.gene52366:CDS | 55.0% | |
CCAATTGTCATCACGGCTGC+AGG | - | chr3.1:60882441-60882460 | None:intergenic | 55.0% | |
CCACGTTCAACCAAGCTGCT+GGG | - | chr3.1:60882486-60882505 | None:intergenic | 55.0% | |
CCTGCAGCCGTGATGACAAT+TGG | + | chr3.1:60882438-60882457 | MS.gene52366:CDS | 55.0% | |
CGTGACTGCCAAGCACACAT+GGG | + | chr3.1:60882383-60882402 | MS.gene52366:CDS | 55.0% | |
GGGTGTGTCGGATATGAGGA+AGG | - | chr3.1:60882466-60882485 | None:intergenic | 55.0% | |
GTGACTGCCAAGCACACATG+GGG | + | chr3.1:60882384-60882403 | MS.gene52366:CDS | 55.0% | |
GTGGCATGATAGACCAAGCC+AGG | + | chr3.1:60882502-60882521 | MS.gene52366:CDS | 55.0% | |
TGCTGGGTGTGTCGGATATG+AGG | - | chr3.1:60882470-60882489 | None:intergenic | 55.0% | |
! | GCTTTGGCGACTGGTGTTGA+TGG | + | chr3.1:60883147-60883166 | MS.gene52366:CDS | 55.0% |
!! | GCTTTGCTAGCTTTGGCGAC+TGG | + | chr3.1:60883138-60883157 | MS.gene52366:CDS | 55.0% |
!! | GGTGGTGCCATCTTTCTTGC+TGG | + | chr3.1:60881816-60881835 | MS.gene52366:CDS | 55.0% |
!!! | CCGCAGGTTTTGGTTGGTCT+TGG | + | chr3.1:60883229-60883248 | MS.gene52366:CDS | 55.0% |
ATCCGACACACCCAGCAGCT+TGG | + | chr3.1:60882473-60882492 | MS.gene52366:CDS | 60.0% | |
CCCAGCAGCTTGGTTGAACG+TGG | + | chr3.1:60882483-60882502 | MS.gene52366:CDS | 60.0% | |
GATGGCACCACCCAACACGA+TGG | - | chr3.1:60881808-60881827 | None:intergenic | 60.0% | |
GCCACGTTCAACCAAGCTGC+TGG | - | chr3.1:60882487-60882506 | None:intergenic | 60.0% | |
! | TGGCGAGGTGCTTTCAGCAC+AGG | + | chr3.1:60882309-60882328 | MS.gene52366:CDS | 60.0% |
CTGCCAAGCACACATGGGGC+TGG | + | chr3.1:60882388-60882407 | MS.gene52366:CDS | 65.0% | |
TCGCCAGCCCCATGTGTGCT+TGG | - | chr3.1:60882394-60882413 | None:intergenic | 65.0% | |
! | TGGGGCTGGCGACTCTCTCT+TGG | + | chr3.1:60882402-60882421 | MS.gene52366:CDS | 65.0% |
GGTCTTGGGGCCCACTCACC+TGG | + | chr3.1:60883244-60883263 | MS.gene52366:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 60880974 | 60883566 | 60880974 | ID=MS.gene52366 |
chr3.1 | mRNA | 60880974 | 60883566 | 60880974 | ID=MS.gene52366.t1;Parent=MS.gene52366 |
chr3.1 | exon | 60880974 | 60881106 | 60880974 | ID=MS.gene52366.t1.exon1;Parent=MS.gene52366.t1 |
chr3.1 | CDS | 60880974 | 60881106 | 60880974 | ID=cds.MS.gene52366.t1;Parent=MS.gene52366.t1 |
chr3.1 | exon | 60881607 | 60881926 | 60881607 | ID=MS.gene52366.t1.exon2;Parent=MS.gene52366.t1 |
chr3.1 | CDS | 60881607 | 60881926 | 60881607 | ID=cds.MS.gene52366.t1;Parent=MS.gene52366.t1 |
chr3.1 | exon | 60882270 | 60882899 | 60882270 | ID=MS.gene52366.t1.exon3;Parent=MS.gene52366.t1 |
chr3.1 | CDS | 60882270 | 60882899 | 60882270 | ID=cds.MS.gene52366.t1;Parent=MS.gene52366.t1 |
chr3.1 | exon | 60883126 | 60883566 | 60883126 | ID=MS.gene52366.t1.exon4;Parent=MS.gene52366.t1 |
chr3.1 | CDS | 60883126 | 60883566 | 60883126 | ID=cds.MS.gene52366.t1;Parent=MS.gene52366.t1 |
Gene Sequence |
Protein sequence |