AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57298

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57298.t1 MTR_8g090190 99.729 369 1 0 1 369 1 369 0.0 768
MS.gene57298.t1 MTR_3g087140 87.052 363 47 0 1 363 1 363 0.0 665
MS.gene57298.t1 MTR_6g022310 30.704 355 191 10 17 364 121 427 2.39e-37 142
MS.gene57298.t1 MTR_4g130940 30.682 352 192 10 24 365 93 402 7.01e-36 139
MS.gene57298.t1 MTR_4g130940 30.682 352 192 10 24 365 93 402 7.49e-36 139
MS.gene57298.t1 MTR_3g100480 29.462 353 198 10 21 365 582 891 2.34e-35 137
MS.gene57298.t1 MTR_5g030360 30.259 347 186 9 24 364 155 451 5.78e-35 136
MS.gene57298.t1 MTR_6g022290 29.775 356 193 11 17 364 23 329 3.15e-33 130
MS.gene57298.t1 MTR_3g100480 27.441 379 202 10 21 365 582 921 5.49e-33 130
MS.gene57298.t1 MTR_5g066000 28.857 350 199 10 23 365 542 848 2.49e-32 129
MS.gene57298.t1 MTR_1g014680 29.321 324 181 9 24 334 182 470 1.93e-31 126
MS.gene57298.t1 MTR_4g115880 26.744 430 187 14 16 360 192 578 2.24e-31 125
MS.gene57298.t1 MTR_2g071620 29.714 350 196 10 24 365 465 772 2.35e-31 125
MS.gene57298.t1 MTR_6g022300 29.023 348 192 11 24 364 68 367 6.27e-31 124
MS.gene57298.t1 MTR_1g014260 29.223 373 182 15 16 340 176 514 2.30e-30 122
MS.gene57298.t1 MTR_5g032380 28.483 323 192 8 23 338 424 714 9.10e-30 121
MS.gene57298.t1 MTR_8g067060 27.011 348 195 9 24 364 204 499 3.00e-28 116
MS.gene57298.t1 MTR_8g471100 27.011 348 195 9 24 364 213 508 3.48e-28 115
MS.gene57298.t1 MTR_5g430360 30.272 294 151 9 78 364 37 283 5.84e-28 115
MS.gene57298.t1 MTR_2g070390 27.083 336 198 6 23 342 22 326 1.15e-27 114
MS.gene57298.t1 MTR_1g010040 29.747 316 172 8 24 330 108 382 1.62e-27 114
MS.gene57298.t1 MTR_1g010040 29.747 316 172 8 24 330 108 382 1.95e-27 114
MS.gene57298.t1 MTR_3g108660 29.841 315 173 9 24 330 108 382 1.99e-27 114
MS.gene57298.t1 MTR_3g108660 29.841 315 173 9 24 330 108 382 2.01e-27 114
MS.gene57298.t1 MTR_5g086700 27.434 339 191 12 22 347 203 499 3.66e-20 92.8
MS.gene57298.t1 MTR_5g086700 27.434 339 191 12 22 347 203 499 3.84e-20 92.8
MS.gene57298.t1 MTR_8g064910 26.781 351 198 14 24 364 55 356 4.32e-20 91.3
MS.gene57298.t1 MTR_1g041240 26.706 337 192 11 24 347 201 495 7.42e-20 92.0
MS.gene57298.t1 MTR_1g041240 26.706 337 192 11 24 347 202 496 7.92e-20 91.7
MS.gene57298.t1 MTR_1g041240 26.706 337 192 11 24 347 200 494 8.06e-20 91.7
MS.gene57298.t1 MTR_7g088760 33.129 163 87 6 208 363 754 901 3.14e-17 84.0
MS.gene57298.t1 MTR_7g088760 33.129 163 87 6 208 363 771 918 3.34e-17 84.0
MS.gene57298.t1 MTR_2g087710 32.143 168 90 7 208 366 717 869 5.79e-15 77.0
MS.gene57298.t1 MTR_7g106570 33.333 168 87 7 204 363 738 888 1.30e-14 75.9
MS.gene57298.t1 MTR_1g077980 31.638 177 100 6 194 364 751 912 2.50e-14 75.1
MS.gene57298.t1 MTR_1g077980 28.019 207 135 6 19 218 314 513 4.59e-11 64.7
MS.gene57298.t1 MTR_0279s0020 24.642 349 187 14 24 360 6 290 7.72e-14 72.4
MS.gene57298.t1 MTR_0279s0020 24.496 347 186 14 30 364 3 285 2.83e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57298.t1 AT4G39910 88.889 369 37 3 1 365 1 369 0.0 674
MS.gene57298.t1 AT2G22310 88.493 365 39 2 1 364 1 363 0.0 669
MS.gene57298.t1 AT2G22310 87.273 330 39 2 36 364 4 331 0.0 595
MS.gene57298.t1 AT2G22310 87.423 326 38 2 40 364 3 326 0.0 589
MS.gene57298.t1 AT4G24560 27.011 348 207 9 24 365 543 849 8.50e-34 133
MS.gene57298.t1 AT5G57990 28.280 343 197 12 24 360 108 407 2.12e-33 132
MS.gene57298.t1 AT5G65450 30.380 316 180 9 23 330 348 631 9.68e-32 127
MS.gene57298.t1 AT5G65450 30.380 316 180 9 23 330 329 612 1.01e-31 127
MS.gene57298.t1 AT3G14400 29.607 331 200 5 23 342 24 332 1.43e-31 126
MS.gene57298.t1 AT2G24640 27.966 354 205 12 24 369 5 316 1.69e-30 122
MS.gene57298.t1 AT2G24640 27.966 354 205 12 24 369 175 486 3.13e-30 122
MS.gene57298.t1 AT1G17110 28.116 345 198 10 24 360 439 741 6.56e-30 121
MS.gene57298.t1 AT1G17110 28.116 345 198 10 24 360 439 741 6.56e-30 121
MS.gene57298.t1 AT1G17110 28.116 345 198 10 24 360 443 745 8.07e-30 121
MS.gene57298.t1 AT4G31670 27.044 318 196 9 24 334 169 457 1.54e-29 120
MS.gene57298.t1 AT4G17895 29.261 352 187 11 24 364 177 477 1.66e-26 111
MS.gene57298.t1 AT3G49600 27.515 338 195 8 24 352 107 403 7.50e-26 109
MS.gene57298.t1 AT3G49600 27.515 338 195 8 24 352 107 403 7.50e-26 109
MS.gene57298.t1 AT3G49600 27.515 338 195 8 24 352 107 403 8.25e-26 109
MS.gene57298.t1 AT5G46740 29.513 349 196 11 24 364 164 470 1.14e-23 103
MS.gene57298.t1 AT4G30890 27.273 374 218 16 24 363 198 551 3.60e-23 101
MS.gene57298.t1 AT4G30890 27.273 374 218 16 24 363 198 551 3.60e-23 101
MS.gene57298.t1 AT4G30890 27.273 374 218 16 24 363 198 551 3.60e-23 101
MS.gene57298.t1 AT3G11910 27.114 343 195 12 22 351 197 497 4.01e-20 92.8
MS.gene57298.t1 AT3G11910 27.114 343 195 12 22 351 197 497 4.01e-20 92.8
MS.gene57298.t1 AT3G11910 27.114 343 195 12 22 351 196 496 4.16e-20 92.8
MS.gene57298.t1 AT3G11910 27.114 343 195 12 22 351 196 496 4.16e-20 92.8
MS.gene57298.t1 AT5G06600 27.139 339 192 12 22 347 198 494 1.37e-19 91.3
MS.gene57298.t1 AT5G06600 27.139 339 192 12 22 347 197 493 1.41e-19 91.3
MS.gene57298.t1 AT5G06600 27.139 339 192 12 22 347 198 494 1.58e-19 90.9
MS.gene57298.t1 AT5G10790 24.403 377 203 9 16 339 43 390 2.64e-19 89.4
MS.gene57298.t1 AT5G10790 24.403 377 203 9 16 339 172 519 7.58e-19 88.6
MS.gene57298.t1 AT5G46740 32.323 198 112 6 173 364 80 261 1.79e-16 81.3
MS.gene57298.t1 AT2G40930 31.250 160 88 6 208 360 769 913 4.90e-15 77.0
MS.gene57298.t1 AT2G40930 31.250 160 88 6 208 360 769 913 4.90e-15 77.0
MS.gene57298.t1 AT5G22030 31.325 166 93 6 204 363 719 869 1.61e-14 75.5
MS.gene57298.t1 AT5G22030 31.325 166 93 6 204 363 761 911 1.73e-14 75.5
MS.gene57298.t1 AT4G10590 33.735 166 89 6 204 363 744 894 2.32e-14 75.1
MS.gene57298.t1 AT4G10590 33.735 166 89 6 204 363 744 894 2.32e-14 75.1
MS.gene57298.t1 AT4G10590 33.735 166 89 6 204 363 744 894 2.32e-14 75.1
MS.gene57298.t1 AT4G10590 33.735 166 89 6 204 363 744 894 2.32e-14 75.1
MS.gene57298.t1 AT4G10570 33.133 166 90 6 204 363 745 895 3.41e-14 74.7
MS.gene57298.t1 AT1G32850 31.953 169 90 7 203 363 729 880 4.10e-13 71.2

Find 75 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTACCCAAGTAATTAA+AGG 0.260330 4.1:+10321685 None:intergenic
GTAATTAAAGGCTCTTTCTT+AGG 0.269652 4.1:+10321697 None:intergenic
TCTGAAGGTGTTGGTGTCTC+TGG 0.275197 4.1:+10321760 None:intergenic
TCCGCCGTGCAAACGTTCTT+TGG 0.310357 4.1:-10320485 MS.gene57298:CDS
CCAAAGTAACGTTCTCCTTC+AGG 0.310974 4.1:+10325302 None:intergenic
GAATGAACTTGTCGACATTC+TGG 0.315995 4.1:-10321812 MS.gene57298:CDS
GAACAACTGCTGGAGTATTA+TGG 0.316104 4.1:-10324473 MS.gene57298:CDS
AACGTTCTCCTTCAGGGAAT+TGG 0.317047 4.1:+10325309 None:intergenic
CTCCATCTAGTTACTGTTAC+CGG 0.321318 4.1:+10320397 None:intergenic
CAACCTCTGTACAAATCGTT+TGG 0.322213 4.1:+10323657 None:intergenic
TACTTTGGTCTTGAGAATTT+CGG 0.342794 4.1:-10325287 MS.gene57298:CDS
AAAGAAACCTCCTCACATTC+TGG 0.344711 4.1:-10320756 MS.gene57298:CDS
AGAAAGAGCCTTTAATTACT+TGG 0.355430 4.1:-10321693 MS.gene57298:CDS
TATGGAAATAACAAAACCTT+AGG 0.373430 4.1:-10324455 MS.gene57298:CDS
TTGCAAGCACCTTGTCTCAT+TGG 0.375899 4.1:+10321478 None:intergenic
TTCAAGAATGGTCATGCTAA+TGG 0.388068 4.1:-10321721 MS.gene57298:CDS
TCCATTTCGGGAACAACTGC+TGG 0.393629 4.1:-10324483 MS.gene57298:CDS
AACCTCTGTACAAATCGTTT+GGG 0.398526 4.1:+10323658 None:intergenic
CCTTCAGAAAAGGTTGCAAA+TGG 0.403517 4.1:-10321745 MS.gene57298:CDS
TCCAGCAGTTGTTCCCGAAA+TGG 0.416148 4.1:+10324482 None:intergenic
CACGTGCTGATGGGTGCTGC+TGG 0.422192 4.1:-10325359 None:intergenic
ATGGAAATAACAAAACCTTA+GGG 0.426140 4.1:-10324454 MS.gene57298:CDS
TCTCAAGCGGTTTAAATACA+TGG 0.443043 4.1:-10320726 MS.gene57298:CDS
CCTGAAGGAGAACGTTACTT+TGG 0.445835 4.1:-10325302 MS.gene57298:CDS
GAAAGAGCCTTTAATTACTT+GGG 0.460212 4.1:-10321692 MS.gene57298:CDS
CTTTCGTAGCTATATGCATC+AGG 0.467030 4.1:-10323617 MS.gene57298:intron
GTTTAAATACATGGAACAGC+TGG 0.470114 4.1:-10320717 MS.gene57298:CDS
ACCGAGTGCCTTCTCAAGCT+TGG 0.472929 4.1:+10325334 None:intergenic
TATTGAGTATTCTCTATTTG+CGG 0.483092 4.1:-10320618 MS.gene57298:CDS
CAAAGTAACGTTCTCCTTCA+GGG 0.493408 4.1:+10325303 None:intergenic
GACACCAACACCTTCAGAAA+AGG 0.494615 4.1:-10321755 MS.gene57298:CDS
CTGACATAATGCCCATGGTT+GGG 0.500962 4.1:+10320572 None:intergenic
CATTCTGGAGAAAGAGGCTC+AGG 0.502874 4.1:-10321797 MS.gene57298:CDS
TTCTATGAGAGCATTGGGCC+CGG 0.506913 4.1:-10320416 MS.gene57298:CDS
GTTGCAAATGGGTTCAAGAA+TGG 0.518444 4.1:-10321733 MS.gene57298:CDS
TATTACTCAGCTTCAGCTCA+AGG 0.525905 4.1:+10320657 None:intergenic
GTTGGCAGTGGTCCCAACCA+TGG 0.526315 4.1:-10320584 MS.gene57298:CDS
CTTCAGAAAAGGTTGCAAAT+GGG 0.537604 4.1:-10321744 MS.gene57298:CDS
AGTTCGCAGAAGAAGAAAAC+CGG 0.539192 4.1:-10323691 MS.gene57298:CDS
TAACAAAACCTTAGGGGATG+CGG 0.540455 4.1:-10324447 MS.gene57298:CDS
TATTCAACTAACACCGACCA+TGG 0.551966 4.1:-10320449 MS.gene57298:CDS
TTCTGGTCATTCATCTCAAG+CGG 0.553690 4.1:-10320739 MS.gene57298:CDS
TGTCGACATTCTGGAGAAAG+AGG 0.558202 4.1:-10321803 MS.gene57298:CDS
AACGTTCTTTGGATCACCAC+AGG 0.559651 4.1:-10320474 MS.gene57298:CDS
TTGGCAGTGGTCCCAACCAT+GGG 0.561554 4.1:-10320583 MS.gene57298:CDS
ATTACTCAGCTTCAGCTCAA+GGG 0.562003 4.1:+10320658 None:intergenic
TCCATCTAGTTACTGTTACC+GGG 0.563825 4.1:+10320398 None:intergenic
TGCTGGTTCCAAGCTTGAGA+AGG 0.565161 4.1:-10325342 MS.gene57298:CDS
GTAGTTGTTCATGTTGGCAG+TGG 0.568127 4.1:-10320596 MS.gene57298:CDS
TTTGCGGTAGTTGTTCATGT+TGG 0.570867 4.1:-10320602 MS.gene57298:CDS
CTCCCAAACGATTTGTACAG+AGG 0.577523 4.1:-10323660 MS.gene57298:CDS
TCCAAGCTTGAGAAGGCACT+CGG 0.581992 4.1:-10325335 MS.gene57298:CDS
TTACTCAGCTTCAGCTCAAG+GGG 0.593719 4.1:+10320659 None:intergenic
TTGTGAAAAGCCATAACCAC+TGG 0.595274 4.1:-10320547 MS.gene57298:CDS
TTTAAATACATGGAACAGCT+GGG 0.600093 4.1:-10320716 MS.gene57298:CDS
AATGTGAAACTGTGACAGCT+AGG 0.603275 4.1:-10321457 MS.gene57298:CDS
CATAGAACAAAATGTACCCA+TGG 0.607092 4.1:+10320432 None:intergenic
CTCGGTGACCAATTCCCTGA+AGG 0.615354 4.1:-10325317 MS.gene57298:CDS
GCTGACATAATGCCCATGGT+TGG 0.618993 4.1:+10320571 None:intergenic
CAAGGCTGACATAATGCCCA+TGG 0.620655 4.1:+10320567 None:intergenic
CTCCGCATTCAACGTCTCAG+TGG 0.635411 4.1:+10321358 None:intergenic
CACTGAGACGTTGAATGCGG+AGG 0.643034 4.1:-10321357 MS.gene57298:CDS
TGGAAATAACAAAACCTTAG+GGG 0.647882 4.1:-10324453 MS.gene57298:CDS
ATTCAACTAACACCGACCAT+GGG 0.648378 4.1:-10320448 MS.gene57298:CDS
GTGTTAGTTGAATATTCCTG+TGG 0.649469 4.1:+10320458 None:intergenic
TCGTTTGGGAGCAATGACAC+CGG 0.652677 4.1:+10323672 None:intergenic
TTCCACTGAGACGTTGAATG+CGG 0.653862 4.1:-10321360 MS.gene57298:CDS
ATGTGAAACTGTGACAGCTA+GGG 0.662477 4.1:-10321456 MS.gene57298:CDS
TGATCCAAAGAACGTTTGCA+CGG 0.665690 4.1:+10320481 None:intergenic
GAACAAAATGTACCCATGGT+CGG 0.668984 4.1:+10320436 None:intergenic
TGAATGACCAGAATGTGAGG+AGG 0.681890 4.1:+10320749 None:intergenic
GGTAAGACAACTTCTTGTAG+CGG 0.683615 4.1:+10320693 None:intergenic
AGATGAATGACCAGAATGTG+AGG 0.695994 4.1:+10320746 None:intergenic
GAATACTCACCAATGAGACA+AGG 0.708354 4.1:-10321487 MS.gene57298:CDS
TCCAAAGAACGTTTGCACGG+CGG 0.730946 4.1:+10320484 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATGACAAAAAAAAAT+TGG + chr4.1:10324117-10324136 None:intergenic 10.0%
!! AAATAAAAAATAAGAAAATC+TGG + chr4.1:10321680-10321699 None:intergenic 10.0%
!! ATATGTTATTAAAGAAAATA+TGG + chr4.1:10321653-10321672 None:intergenic 10.0%
!! ATTAACTATTATTATATATC+CGG - chr4.1:10323477-10323496 MS.gene57298:intron 10.0%
!! AAATTCAGAAAAGAAAAAAA+TGG + chr4.1:10320636-10320655 None:intergenic 15.0%
!! ATATAAATAAGACATTAGTT+TGG - chr4.1:10322264-10322283 MS.gene57298:intron 15.0%
!! GAAAAGAAAAAAAAACTAAT+TGG + chr4.1:10323613-10323632 None:intergenic 15.0%
!! TAATACTTAGAATCATAATT+AGG + chr4.1:10321146-10321165 None:intergenic 15.0%
!! TAATTGTTGAATAATCTATA+AGG - chr4.1:10320690-10320709 MS.gene57298:CDS 15.0%
!! TTAATAATGTAAAGTGATAA+GGG + chr4.1:10323542-10323561 None:intergenic 15.0%
!! TTAATTCACAAAAACATTTA+AGG - chr4.1:10322595-10322614 MS.gene57298:intron 15.0%
!! TTAGATTTATATCTATATTG+TGG - chr4.1:10324212-10324231 MS.gene57298:intron 15.0%
!!! TGTTAATTTTAATGTATCAT+TGG - chr4.1:10323814-10323833 MS.gene57298:intron 15.0%
!!! TTGAATATCATGTATATTTT+TGG - chr4.1:10324742-10324761 MS.gene57298:intron 15.0%
!!! TTTTTAACTTAAGCATTTAA+AGG + chr4.1:10322876-10322895 None:intergenic 15.0%
!! AAAAAATAAGAAAATCTGGT+AGG + chr4.1:10321676-10321695 None:intergenic 20.0%
!! ATAAACATTTGCAATATCAT+TGG - chr4.1:10323147-10323166 MS.gene57298:intron 20.0%
!! ATAAATTGTGAACTTTGTAA+TGG - chr4.1:10324166-10324185 MS.gene57298:intron 20.0%
!! ATGAAAAAGTAGTTATAAGT+GGG - chr4.1:10323376-10323395 MS.gene57298:intron 20.0%
!! CCTGAAAAATTATTTATAAG+CGG - chr4.1:10322677-10322696 MS.gene57298:intron 20.0%
!! CTGAAAAATTATTTATAAGC+GGG - chr4.1:10322678-10322697 MS.gene57298:intron 20.0%
!! CTTAATAATGTAAAGTGATA+AGG + chr4.1:10323543-10323562 None:intergenic 20.0%
!! GAAATAAATATGTTGAATTC+AGG + chr4.1:10322028-10322047 None:intergenic 20.0%
!! TAAAACTTACATTCAATTCT+TGG + chr4.1:10323095-10323114 None:intergenic 20.0%
!! TAAGTATTAAGTTTGAAGAT+GGG - chr4.1:10321157-10321176 MS.gene57298:intron 20.0%
!! TATTTCATCATAGAATGAAA+AGG + chr4.1:10323640-10323659 None:intergenic 20.0%
!! TTTGTGAATTAAAAAAAGCT+TGG + chr4.1:10322587-10322606 None:intergenic 20.0%
!!! AAACTCTTCAAAAATTTGTT+TGG + chr4.1:10320671-10320690 None:intergenic 20.0%
!!! ATTTTTGTTATTTACCTGTT+TGG - chr4.1:10320713-10320732 MS.gene57298:CDS 20.0%
!!! CGCTTATAAATAATTTTTCA+GGG + chr4.1:10322679-10322698 None:intergenic 20.0%
!!! GCTTATAAATAATTTTTCAG+GGG + chr4.1:10322678-10322697 None:intergenic 20.0%
!!! GTTTGTTTGTTATATTTTTG+TGG - chr4.1:10321179-10321198 MS.gene57298:intron 20.0%
!!! TCATATCTAAAGTCTTAATT+TGG + chr4.1:10323452-10323471 None:intergenic 20.0%
!!! TTATACAAATGATTTGTTTC+AGG + chr4.1:10321943-10321962 None:intergenic 20.0%
!!! TTCAACATATTTATTTCTGT+TGG - chr4.1:10322031-10322050 MS.gene57298:intron 20.0%
! AAAAATTATTTATAAGCGGG+AGG - chr4.1:10322681-10322700 MS.gene57298:intron 25.0%
! AAATGTTTATAATGACACAG+TGG + chr4.1:10323137-10323156 None:intergenic 25.0%
! AACACAAATTTATAACCTGA+AGG - chr4.1:10323309-10323328 MS.gene57298:intron 25.0%
! AACTATTATTATATATCCGG+TGG - chr4.1:10323480-10323499 MS.gene57298:intron 25.0%
! AATAATTCTGTAACTGATGT+TGG - chr4.1:10323656-10323675 MS.gene57298:CDS 25.0%
! ACACAAACAATAACAGAAAA+AGG + chr4.1:10321703-10321722 None:intergenic 25.0%
! ACACAAATTTATAACCTGAA+GGG - chr4.1:10323310-10323329 MS.gene57298:intron 25.0%
! ACAGAATAAAAAAGTAACAC+TGG + chr4.1:10322516-10322535 None:intergenic 25.0%
! AGAGATGCTATTATCTATAT+TGG - chr4.1:10322424-10322443 MS.gene57298:intron 25.0%
! AGAGGGAAATAAAATAAATG+TGG - chr4.1:10324699-10324718 MS.gene57298:intron 25.0%
! ATAATTCTGTAACTGATGTT+GGG - chr4.1:10323657-10323676 MS.gene57298:CDS 25.0%
! ATCAAGTATCAACTATATCT+TGG - chr4.1:10321968-10321987 MS.gene57298:intron 25.0%
! ATGGAAAAACAAACATGTTA+CGG + chr4.1:10324802-10324821 None:intergenic 25.0%
! ATGGAAATAACAAAACCTTA+GGG - chr4.1:10321299-10321318 MS.gene57298:intron 25.0%
! ATTTAGACTAATCGCTATAA+TGG - chr4.1:10320993-10321012 MS.gene57298:intron 25.0%
! CAAGGAAATGTAAATAAACA+TGG + chr4.1:10322366-10322385 None:intergenic 25.0%
! CAGTTAAAAGTAGAAAACAA+TGG + chr4.1:10324678-10324697 None:intergenic 25.0%
! CATGAAAAAGTAGTTATAAG+TGG - chr4.1:10323375-10323394 MS.gene57298:intron 25.0%
! CTAAGTATTAAGTTTGAAGA+TGG - chr4.1:10321156-10321175 MS.gene57298:intron 25.0%
! GAACTTATTCTTAACACTTA+TGG + chr4.1:10322173-10322192 None:intergenic 25.0%
! TAAAAAGTTCAAGAATTCGT+GGG + chr4.1:10323919-10323938 None:intergenic 25.0%
! TAATACAACAATGTTACTGT+CGG - chr4.1:10323872-10323891 MS.gene57298:intron 25.0%
! TAGAAACTAGACAAAATATG+AGG + chr4.1:10323850-10323869 None:intergenic 25.0%
! TATGGAAATAACAAAACCTT+AGG - chr4.1:10321298-10321317 MS.gene57298:intron 25.0%
! TATTGAGTATTCTCTATTTG+CGG - chr4.1:10325135-10325154 MS.gene57298:intron 25.0%
! TCAAATAATCAAATCCAAAC+AGG + chr4.1:10320730-10320749 None:intergenic 25.0%
! TGAACAGATATCTGAAAATT+TGG + chr4.1:10324613-10324632 None:intergenic 25.0%
! TTGCAAATCACAAAAAACAA+CGG + chr4.1:10321059-10321078 None:intergenic 25.0%
!! ACAAGTTGAGAATAAAAGAT+AGG - chr4.1:10321754-10321773 MS.gene57298:CDS 25.0%
!! AGATATAGTTGATACTTGAT+AGG + chr4.1:10321968-10321987 None:intergenic 25.0%
!! AGGTATATGCTTTTATATTG+TGG - chr4.1:10324445-10324464 MS.gene57298:CDS 25.0%
!! ATAAGACATTAGTTTGGATA+TGG - chr4.1:10322270-10322289 MS.gene57298:intron 25.0%
!! ATCTAAAGTCTTAATTTGGT+CGG + chr4.1:10323448-10323467 None:intergenic 25.0%
!! CAAGTTGAGAATAAAAGATA+GGG - chr4.1:10321755-10321774 MS.gene57298:CDS 25.0%
!! CCGCTTATAAATAATTTTTC+AGG + chr4.1:10322680-10322699 None:intergenic 25.0%
!! TAAGACATTAGTTTGGATAT+GGG - chr4.1:10322271-10322290 MS.gene57298:intron 25.0%
!! TATACTTTTGTGTTCCATTT+CGG - chr4.1:10321257-10321276 MS.gene57298:intron 25.0%
!! TCAAATATGAAAAAGCATAG+AGG + chr4.1:10321419-10321438 None:intergenic 25.0%
!! TTTGCTTGTTGAAAATGAAA+AGG + chr4.1:10324779-10324798 None:intergenic 25.0%
!!! ATATTTTTGTGGAGATTTCT+GGG - chr4.1:10321190-10321209 MS.gene57298:intron 25.0%
!!! ATGTTTGTTTTTCCATTGAT+TGG - chr4.1:10324806-10324825 MS.gene57298:intron 25.0%
!!! ATTTTAGTAGTTTCCTGTAA+AGG - chr4.1:10324643-10324662 MS.gene57298:intron 25.0%
!!! CATTGTTTTCTACTTTTAAC+TGG - chr4.1:10324676-10324695 MS.gene57298:intron 25.0%
!!! TATAGCGATTAGTCTAAATT+CGG + chr4.1:10320992-10321011 None:intergenic 25.0%
!!! TATATTTTTGTGGAGATTTC+TGG - chr4.1:10321189-10321208 MS.gene57298:intron 25.0%
!!! TGGTTTTAAAACCAAAACTA+AGG + chr4.1:10321633-10321652 None:intergenic 25.0%
!!! TGTTACTTTTTTATTCTGTC+AGG - chr4.1:10322517-10322536 MS.gene57298:intron 25.0%
!!! TTATAAATTTGTGTTGACTC+TGG + chr4.1:10323304-10323323 None:intergenic 25.0%
!!! TTGTTTTTCTCAATTGCAAA+GGG - chr4.1:10322996-10323015 MS.gene57298:intron 25.0%
!!! TTTTGTTGTTGCAACAAATT+TGG - chr4.1:10324136-10324155 MS.gene57298:intron 25.0%
ACAATAGAGTTTACTTTGTG+AGG - chr4.1:10321909-10321928 MS.gene57298:intron 30.0%
AGAAAGAGCCTTTAATTACT+TGG - chr4.1:10324060-10324079 MS.gene57298:intron 30.0%
AGATAATAGCATCTCTAACT+AGG + chr4.1:10322420-10322439 None:intergenic 30.0%
ATTAAGCCTGCTAATAGATT+TGG - chr4.1:10323557-10323576 MS.gene57298:intron 30.0%
CAAAAAAAAATTGGCAAAGC+AGG + chr4.1:10324108-10324127 None:intergenic 30.0%
CAAAAAATAACCAGTGGTTA+TGG + chr4.1:10325219-10325238 None:intergenic 30.0%
CACAAAGTAAACTCTATTGT+TGG + chr4.1:10321909-10321928 None:intergenic 30.0%
CAGGTAATCAATTTGTAGTT+TGG - chr4.1:10321367-10321386 MS.gene57298:CDS 30.0%
GAAAGAGCCTTTAATTACTT+GGG - chr4.1:10324061-10324080 MS.gene57298:intron 30.0%
GAAATACGATAATGCAGAAA+AGG - chr4.1:10323064-10323083 MS.gene57298:intron 30.0%
GATATTTATTTGTGATGCAG+TGG - chr4.1:10322963-10322982 MS.gene57298:intron 30.0%
GTAAAAAGTTCAAGAATTCG+TGG + chr4.1:10323920-10323939 None:intergenic 30.0%
GTAATTAAAGGCTCTTTCTT+AGG + chr4.1:10324059-10324078 None:intergenic 30.0%
TAATGTAAAGTGATAAGGGA+TGG + chr4.1:10323538-10323557 None:intergenic 30.0%
TATGCTACAGTGAAAATTCA+TGG + chr4.1:10323739-10323758 None:intergenic 30.0%
TGAATAACAATTCGATGTAC+AGG + chr4.1:10322195-10322214 None:intergenic 30.0%
TGCATTGTCTTCACTAATTT+CGG - chr4.1:10321471-10321490 MS.gene57298:CDS 30.0%
TGGAAATAACAAAACCTTAG+GGG - chr4.1:10321300-10321319 MS.gene57298:intron 30.0%
TGTTATTGTTTGTGTGTTGA+AGG - chr4.1:10321708-10321727 MS.gene57298:CDS 30.0%
TTGTGTACCCAAGTAATTAA+AGG + chr4.1:10324071-10324090 None:intergenic 30.0%
TTTAAATACATGGAACAGCT+GGG - chr4.1:10325037-10325056 MS.gene57298:intron 30.0%
! AACTGTTTTGCTCAATATCA+AGG + chr4.1:10324345-10324364 None:intergenic 30.0%
! AAGTTTTACCTGCAAAACAA+AGG - chr4.1:10323107-10323126 MS.gene57298:intron 30.0%
! ATACTTTTGTGTTCCATTTC+GGG - chr4.1:10321258-10321277 MS.gene57298:intron 30.0%
! ATTAAGTTGTTCTTCCAAAC+AGG - chr4.1:10321120-10321139 MS.gene57298:intron 30.0%
! CACTACGATTTAGAATGAAT+CGG + chr4.1:10320560-10320579 None:intergenic 30.0%
! TGGAAATTTTGTGCATTACA+TGG - chr4.1:10321387-10321406 MS.gene57298:CDS 30.0%
! TTATTGTAACAGCGTTTTAC+AGG - chr4.1:10320498-10320517 MS.gene57298:CDS 30.0%
!! AAATTTGTGTTGACTCTTGT+GGG + chr4.1:10323300-10323319 None:intergenic 30.0%
!! ACTTCATTTGTTTTCTGAAC+GGG - chr4.1:10324830-10324849 MS.gene57298:intron 30.0%
!! ATTTTGTTCTATGAGAGCAT+TGG - chr4.1:10325331-10325350 MS.gene57298:CDS 30.0%
!! CACTTCATTTGTTTTCTGAA+CGG - chr4.1:10324829-10324848 MS.gene57298:intron 30.0%
!! CTTGTTTTTCTCAATTGCAA+AGG - chr4.1:10322995-10323014 MS.gene57298:intron 30.0%
!! GTTTTTGCTATCCTTAGTTT+TGG - chr4.1:10321619-10321638 MS.gene57298:intron 30.0%
!! TAAATTTGTGTTGACTCTTG+TGG + chr4.1:10323301-10323320 None:intergenic 30.0%
!! TACTTTGGTCTTGAGAATTT+CGG - chr4.1:10320466-10320485 MS.gene57298:CDS 30.0%
!! TGAAAGCAAATTCTAAGATG+AGG - chr4.1:10322850-10322869 MS.gene57298:intron 30.0%
!! TTTCTACTTTTAACTGGAGA+GGG - chr4.1:10324682-10324701 MS.gene57298:intron 30.0%
!! TTTTCTACTTTTAACTGGAG+AGG - chr4.1:10324681-10324700 MS.gene57298:intron 30.0%
!!! ACTTTTTTATTCTGTCAGGT+TGG - chr4.1:10322521-10322540 MS.gene57298:intron 30.0%
!!! TTTTGTTCTATGAGAGCATT+GGG - chr4.1:10325332-10325351 MS.gene57298:CDS 30.0%
AACCTCTGTACAAATCGTTT+GGG + chr4.1:10322098-10322117 None:intergenic 35.0%
ACATTCTTCACCTTACAAGT+TGG - chr4.1:10323401-10323420 MS.gene57298:intron 35.0%
ATAATAGGGTTGCCATATAG+TGG - chr4.1:10320936-10320955 MS.gene57298:intron 35.0%
ATATATGGAAATCCACCACT+TGG - chr4.1:10323178-10323197 MS.gene57298:intron 35.0%
ATGCTACTGCTTGTTTAACA+TGG - chr4.1:10324555-10324574 MS.gene57298:intron 35.0%
ATGGCGTAAAAAACCTTTAC+AGG + chr4.1:10324659-10324678 None:intergenic 35.0%
ATTGTCTTCACTAATTTCGG+CGG - chr4.1:10321474-10321493 MS.gene57298:CDS 35.0%
ATTTACCAATCTAGTGACCA+AGG - chr4.1:10324921-10324940 MS.gene57298:intron 35.0%
CACCAATCCAAAATTTGAGA+TGG - chr4.1:10322744-10322763 MS.gene57298:intron 35.0%
CATAGAACAAAATGTACCCA+TGG + chr4.1:10325324-10325343 None:intergenic 35.0%
CCATACAAAACCAACTTGTA+AGG + chr4.1:10323414-10323433 None:intergenic 35.0%
CGTCATCAAAAAATAACCAG+TGG + chr4.1:10325225-10325244 None:intergenic 35.0%
CTATATTGGATGTTTCCAGA+TGG - chr4.1:10322438-10322457 MS.gene57298:intron 35.0%
CTTCAGAAAAGGTTGCAAAT+GGG - chr4.1:10324009-10324028 MS.gene57298:intron 35.0%
CTTCTTCCTCTTCTTTCATT+TGG - chr4.1:10321555-10321574 MS.gene57298:intron 35.0%
CTTGCATCTTTGCATAATCA+TGG + chr4.1:10322332-10322351 None:intergenic 35.0%
GAATCATAATTAGGCCTGTT+TGG + chr4.1:10321137-10321156 None:intergenic 35.0%
GATTATGCAAAGATGCAAGT+AGG - chr4.1:10322333-10322352 MS.gene57298:intron 35.0%
GCATATCACTGTTATACTGA+TGG - chr4.1:10323582-10323601 MS.gene57298:intron 35.0%
GGAAAAGATTATGATTCCAC+CGG + chr4.1:10323499-10323518 None:intergenic 35.0%
GTCTCACATTTGATGTGATA+TGG - chr4.1:10322652-10322671 MS.gene57298:intron 35.0%
GTGTTAGTTGAATATTCCTG+TGG + chr4.1:10325298-10325317 None:intergenic 35.0%
GTTTAAATACATGGAACAGC+TGG - chr4.1:10325036-10325055 MS.gene57298:intron 35.0%
TAAATGGGCATGAAAAACAG+AGG + chr4.1:10324906-10324925 None:intergenic 35.0%
TCATTGGACAGCACAATATA+TGG - chr4.1:10323163-10323182 MS.gene57298:intron 35.0%
TCTCAAGCGGTTTAAATACA+TGG - chr4.1:10325027-10325046 MS.gene57298:intron 35.0%
TGAAGACCAAATGAAAGAAG+AGG + chr4.1:10321564-10321583 None:intergenic 35.0%
TGGTCACTAGATTGGTAAAT+GGG + chr4.1:10324921-10324940 None:intergenic 35.0%
TGTTGTTGCAACAAATTTGG+AGG - chr4.1:10324139-10324158 MS.gene57298:intron 35.0%
TTCAAGAATGGTCATGCTAA+TGG - chr4.1:10324032-10324051 MS.gene57298:intron 35.0%
TTCCAGATGCTAGATAATCA+TGG + chr4.1:10321833-10321852 None:intergenic 35.0%
TTGGGTACACAAAAACTTTC+AGG - chr4.1:10324079-10324098 MS.gene57298:intron 35.0%
TTGGTCACTAGATTGGTAAA+TGG + chr4.1:10324922-10324941 None:intergenic 35.0%
TTTCAGCTTCAACATGTGTT+GGG + chr4.1:10322835-10322854 None:intergenic 35.0%
! ACAAATGAAGTGCCAATCAA+TGG + chr4.1:10324821-10324840 None:intergenic 35.0%
! CACCATCTCAAATTTTGGAT+TGG + chr4.1:10322749-10322768 None:intergenic 35.0%
! CGATTTAGAATGAATCGGAT+TGG + chr4.1:10320555-10320574 None:intergenic 35.0%
! TCTGACACCATCTCAAATTT+TGG + chr4.1:10322754-10322773 None:intergenic 35.0%
!! AAATTTGTGTTGACTCTGGT+GGG + chr4.1:10323351-10323370 None:intergenic 35.0%
!! ACCTGAAGGGTATTTATAAG+TGG - chr4.1:10323323-10323342 MS.gene57298:intron 35.0%
!! ATTTCGGTTGGTAGATCATT+AGG - chr4.1:10322486-10322505 MS.gene57298:intron 35.0%
!! CCTGAAGGGTATTTATAAGT+GGG - chr4.1:10323324-10323343 MS.gene57298:intron 35.0%
!! TAAATTTGTGTTGACTCTGG+TGG + chr4.1:10323352-10323371 None:intergenic 35.0%
!!! ACCTTACAAGCTAGTTTTGT+AGG - chr4.1:10322712-10322731 MS.gene57298:intron 35.0%
!!! CCTTACAAGCTAGTTTTGTA+GGG - chr4.1:10322713-10322732 MS.gene57298:intron 35.0%
!!! CCTTACAAGTTGGTTTTGTA+TGG - chr4.1:10323411-10323430 MS.gene57298:intron 35.0%
!!! TGGTTTTGTATGGTTGAGTT+AGG - chr4.1:10323421-10323440 MS.gene57298:intron 35.0%
AAAACCGCATGCCTTGAATT+TGG + chr4.1:10322548-10322567 None:intergenic 40.0%
AAAAGCTTGGAACAATTCCG+AGG + chr4.1:10322574-10322593 None:intergenic 40.0%
AAAATTACTACCCGCAGGAT+TGG + chr4.1:10323024-10323043 None:intergenic 40.0%
AAAGAAACCTCCTCACATTC+TGG - chr4.1:10324997-10325016 MS.gene57298:intron 40.0%
AAAGCTGAAAGTTCGAAGCA+AGG + chr4.1:10322384-10322403 None:intergenic 40.0%
AAAGCTTGGAACAATTCCGA+GGG + chr4.1:10322573-10322592 None:intergenic 40.0%
AAGTCCTTGTGAGACTGTTT+GGG - chr4.1:10320766-10320785 MS.gene57298:CDS 40.0%
AATGTGAAACTGTGACAGCT+AGG - chr4.1:10324296-10324315 MS.gene57298:intron 40.0%
ACGGTCTAGATGTTCATTCA+TGG - chr4.1:10323241-10323260 MS.gene57298:intron 40.0%
AGAAGAGGAAGAAGAATGCA+AGG + chr4.1:10321549-10321568 None:intergenic 40.0%
AGATGAATGACCAGAATGTG+AGG + chr4.1:10325010-10325029 None:intergenic 40.0%
AGTTCGCAGAAGAAGAAAAC+CGG - chr4.1:10322062-10322081 MS.gene57298:intron 40.0%
ATGCAGCCAAATCTATTAGC+AGG + chr4.1:10323566-10323585 None:intergenic 40.0%
ATGTGAAACTGTGACAGCTA+GGG - chr4.1:10324297-10324316 MS.gene57298:intron 40.0%
ATTACTCAGCTTCAGCTCAA+GGG + chr4.1:10325098-10325117 None:intergenic 40.0%
ATTCAACTAACACCGACCAT+GGG - chr4.1:10325305-10325324 MS.gene57298:CDS 40.0%
CAAAGTAACGTTCTCCTTCA+GGG + chr4.1:10320453-10320472 None:intergenic 40.0%
CAACCTCTGTACAAATCGTT+TGG + chr4.1:10322099-10322118 None:intergenic 40.0%
CACCATGATTATCTAGCATC+TGG - chr4.1:10321828-10321847 MS.gene57298:CDS 40.0%
CCAAAAGAAAGTTTGCACCT+TGG + chr4.1:10324941-10324960 None:intergenic 40.0%
CCCACTTATAAATACCCTTC+AGG + chr4.1:10323327-10323346 None:intergenic 40.0%
CCTTCAGAAAAGGTTGCAAA+TGG - chr4.1:10324008-10324027 MS.gene57298:intron 40.0%
CGGTCTAGATGTTCATTCAT+GGG - chr4.1:10323242-10323261 MS.gene57298:intron 40.0%
CTGACAACAAGTATTTCGGT+TGG - chr4.1:10322474-10322493 MS.gene57298:intron 40.0%
CTTTCAGCTTCAACATGTGT+TGG + chr4.1:10322836-10322855 None:intergenic 40.0%
CTTTCGTAGCTATATGCATC+AGG - chr4.1:10322136-10322155 MS.gene57298:intron 40.0%
GAACAAAATGTACCCATGGT+CGG + chr4.1:10325320-10325339 None:intergenic 40.0%
GAATACTCACCAATGAGACA+AGG - chr4.1:10324266-10324285 MS.gene57298:intron 40.0%
GAATGAACTTGTCGACATTC+TGG - chr4.1:10323941-10323960 MS.gene57298:intron 40.0%
GAGCCTGACAACAAGTATTT+CGG - chr4.1:10322470-10322489 MS.gene57298:intron 40.0%
GGTAAGACAACTTCTTGTAG+CGG + chr4.1:10325063-10325082 None:intergenic 40.0%
GTGTTGAAGGAGAATTTGTC+AGG - chr4.1:10321721-10321740 MS.gene57298:CDS 40.0%
TAACAAAACCTTAGGGGATG+CGG - chr4.1:10321306-10321325 MS.gene57298:intron 40.0%
TACTTGGTTTCTCGATTGGT+TGG - chr4.1:10324478-10324497 MS.gene57298:CDS 40.0%
TATTACTCAGCTTCAGCTCA+AGG + chr4.1:10325099-10325118 None:intergenic 40.0%
TATTCAACTAACACCGACCA+TGG - chr4.1:10325304-10325323 MS.gene57298:CDS 40.0%
TGATCCAAAGAACGTTTGCA+CGG + chr4.1:10325275-10325294 None:intergenic 40.0%
TTCTGGTCATTCATCTCAAG+CGG - chr4.1:10325014-10325033 MS.gene57298:intron 40.0%
TTGAATCCACTCAGGTCAAT+TGG - chr4.1:10322804-10322823 MS.gene57298:intron 40.0%
TTGTGAAAAGCCATAACCAC+TGG - chr4.1:10325206-10325225 MS.gene57298:intron 40.0%
TTTATCTGAATGCCTCACAG+TGG - chr4.1:10321597-10321616 MS.gene57298:intron 40.0%
TTTGCGGTAGTTGTTCATGT+TGG - chr4.1:10325151-10325170 MS.gene57298:intron 40.0%
! AAAAGTATAGTGCCTGCAGA+AGG + chr4.1:10321246-10321265 None:intergenic 40.0%
! ACTTGGTTTCTCGATTGGTT+GGG - chr4.1:10324479-10324498 MS.gene57298:CDS 40.0%
! AGTGGTTATGGCTTTTCACA+AGG + chr4.1:10325207-10325226 None:intergenic 40.0%
! ATCCTGCGGGTAGTAATTTT+TGG - chr4.1:10323024-10323043 MS.gene57298:intron 40.0%
! CCAAGGTGCAAACTTTCTTT+TGG - chr4.1:10324938-10324957 MS.gene57298:intron 40.0%
! CCATTTGCAACCTTTTCTGA+AGG + chr4.1:10324011-10324030 None:intergenic 40.0%
! CCCTACAAAACTAGCTTGTA+AGG + chr4.1:10322716-10322735 None:intergenic 40.0%
! CTGTTACTTGGTTTCTCGAT+TGG - chr4.1:10324474-10324493 MS.gene57298:CDS 40.0%
! GAACAACTGCTGGAGTATTA+TGG - chr4.1:10321280-10321299 MS.gene57298:intron 40.0%
! GTTGCAAATGGGTTCAAGAA+TGG - chr4.1:10324020-10324039 MS.gene57298:intron 40.0%
! GTTTTCTGAACGGGATTTCT+TGG - chr4.1:10324839-10324858 MS.gene57298:intron 40.0%
! TACTGTCGGTCTTCTCTTTT+CGG - chr4.1:10323886-10323905 MS.gene57298:intron 40.0%
! TCCTGCGGGTAGTAATTTTT+GGG - chr4.1:10323025-10323044 MS.gene57298:intron 40.0%
! TTTTCCCAAACAGTCTCACA+AGG + chr4.1:10320773-10320792 None:intergenic 40.0%
!! ACCATTTTGAGTCATGTGCT+TGG - chr4.1:10324525-10324544 MS.gene57298:intron 40.0%
!! CAACCGAAATACTTGTTGTC+AGG + chr4.1:10322476-10322495 None:intergenic 40.0%
!! CTCATTTTTCTACCTTCTGC+AGG - chr4.1:10321231-10321250 MS.gene57298:intron 40.0%
!!! CTTAGCTGACTTGTTTTCAC+AGG - chr4.1:10321348-10321367 MS.gene57298:CDS 40.0%
AACGTTCTCCTTCAGGGAAT+TGG + chr4.1:10320447-10320466 None:intergenic 45.0%
AACGTTCTTTGGATCACCAC+AGG - chr4.1:10325279-10325298 MS.gene57298:CDS 45.0%
AGGAAGAAGAATGCAAGGCT+GGG + chr4.1:10321544-10321563 None:intergenic 45.0%
AGGCTCACAACATTACCATC+TGG + chr4.1:10322456-10322475 None:intergenic 45.0%
ATGGGTTTGTATGCAGCGTT+CGG - chr4.1:10322289-10322308 MS.gene57298:intron 45.0%
ATTCAAAACAGGTGGCTCGA+CGG + chr4.1:10322790-10322809 None:intergenic 45.0%
CAAGTCCTTGTGAGACTGTT+TGG - chr4.1:10320765-10320784 MS.gene57298:CDS 45.0%
CACTTGGACTAAGTATGCCT+CGG - chr4.1:10323194-10323213 MS.gene57298:intron 45.0%
CCAAAGTAACGTTCTCCTTC+AGG + chr4.1:10320454-10320473 None:intergenic 45.0%
CCTGAAGGAGAACGTTACTT+TGG - chr4.1:10320451-10320470 MS.gene57298:CDS 45.0%
CTCCCAAACGATTTGTACAG+AGG - chr4.1:10322093-10322112 MS.gene57298:intron 45.0%
CTGACATAATGCCCATGGTT+GGG + chr4.1:10325184-10325203 None:intergenic 45.0%
GACACCAACACCTTCAGAAA+AGG - chr4.1:10323998-10324017 MS.gene57298:intron 45.0%
GATGGTTGTGAGTTGTGACA+TGG + chr4.1:10323520-10323539 None:intergenic 45.0%
GCCAAGCACATGACTCAAAA+TGG + chr4.1:10324529-10324548 None:intergenic 45.0%
GCTCAAGGGGAAAAACAACT+CGG + chr4.1:10325084-10325103 None:intergenic 45.0%
GGATAGCAAAAACCACTGTG+AGG + chr4.1:10321612-10321631 None:intergenic 45.0%
GTAGTTGTTCATGTTGGCAG+TGG - chr4.1:10325157-10325176 MS.gene57298:intron 45.0%
GTTGCAAGTTGTTGTGACCA+GGG - chr4.1:10324244-10324263 MS.gene57298:intron 45.0%
TCTCATTGGTGAGTATTCCC+TGG + chr4.1:10324264-10324283 None:intergenic 45.0%
TGAATGACCAGAATGTGAGG+AGG + chr4.1:10325007-10325026 None:intergenic 45.0%
TGGACCAAATTCAAGGCATG+CGG - chr4.1:10322541-10322560 MS.gene57298:intron 45.0%
TGTTGCAAGTTGTTGTGACC+AGG - chr4.1:10324243-10324262 MS.gene57298:intron 45.0%
TTACTCAGCTTCAGCTCAAG+GGG + chr4.1:10325097-10325116 None:intergenic 45.0%
TTGCAAGCACCTTGTCTCAT+TGG + chr4.1:10324278-10324297 None:intergenic 45.0%
TTGCACCTTGGTCACTAGAT+TGG + chr4.1:10324929-10324948 None:intergenic 45.0%
TTGCCATATAGTGGCCATAG+CGG - chr4.1:10320945-10320964 MS.gene57298:intron 45.0%
TTGTGGCATCAGCTGTTACT+TGG - chr4.1:10324462-10324481 MS.gene57298:CDS 45.0%
! ACATCTAGACCGTAACTTGC+AGG + chr4.1:10323234-10323253 None:intergenic 45.0%
! ATAGTGTTACAGTGCCGCTA+TGG + chr4.1:10320962-10320981 None:intergenic 45.0%
! ATTTTCTTCCGCATCCCCTA+AGG + chr4.1:10321317-10321336 None:intergenic 45.0%
! CTGAGTGGATTCAAAACAGG+TGG + chr4.1:10322798-10322817 None:intergenic 45.0%
! GACCTGAGTGGATTCAAAAC+AGG + chr4.1:10322801-10322820 None:intergenic 45.0%
! TGTCGACATTCTGGAGAAAG+AGG - chr4.1:10323950-10323969 MS.gene57298:intron 45.0%
!! CACCTGTTTTGAATCCACTC+AGG - chr4.1:10322796-10322815 MS.gene57298:intron 45.0%
!! GCAACCTTTTCTGAAGGTGT+TGG + chr4.1:10324005-10324024 None:intergenic 45.0%
!! GTCAGGTTGGACCAAATTCA+AGG - chr4.1:10322534-10322553 MS.gene57298:intron 45.0%
!! TTTTCTGTGACAAGTGCTGC+AGG - chr4.1:10324425-10324444 MS.gene57298:CDS 45.0%
!!! GTGGTTTGCCTTTGTTTTGC+AGG + chr4.1:10323118-10323137 None:intergenic 45.0%
!!! ATAATTATTTTTAGATAATA+GGG - chr4.1:10320922-10320941 MS.gene57298:intron 5.0%
!!! TATAATTATTTTTAGATAAT+AGG - chr4.1:10320921-10320940 MS.gene57298:intron 5.0%
AGAATGCAAGGCTGGGAAGT+CGG + chr4.1:10321537-10321556 None:intergenic 50.0%
CAAGGCTGACATAATGCCCA+TGG + chr4.1:10325189-10325208 None:intergenic 50.0%
CGAGGCATACTTAGTCCAAG+TGG + chr4.1:10323196-10323215 None:intergenic 50.0%
GAGGAAGAAGAATGCAAGGC+TGG + chr4.1:10321545-10321564 None:intergenic 50.0%
GATGTTCATTCATGGGCGTG+AGG - chr4.1:10323249-10323268 MS.gene57298:intron 50.0%
GCCCAAAAATTACTACCCGC+AGG + chr4.1:10323029-10323048 None:intergenic 50.0%
GCTGACATAATGCCCATGGT+TGG + chr4.1:10325185-10325204 None:intergenic 50.0%
GCTGATCCAATTGACCTGAG+TGG + chr4.1:10322813-10322832 None:intergenic 50.0%
GGCATACTTAGTCCAAGTGG+TGG + chr4.1:10323193-10323212 None:intergenic 50.0%
GGCGGCTATGATTCATGCTT+TGG - chr4.1:10321492-10321511 MS.gene57298:intron 50.0%
TAAGTATGCCTCGGTGGCTT+GGG - chr4.1:10323203-10323222 MS.gene57298:intron 50.0%
TCCAAAGAACGTTTGCACGG+CGG + chr4.1:10325272-10325291 None:intergenic 50.0%
TCCAGCAGTTGTTCCCGAAA+TGG + chr4.1:10321274-10321293 None:intergenic 50.0%
TCCATTTCGGGAACAACTGC+TGG - chr4.1:10321270-10321289 MS.gene57298:intron 50.0%
TCGTTTGGGAGCAATGACAC+CGG + chr4.1:10322084-10322103 None:intergenic 50.0%
TGCAAAGGGTTCCAATCCTG+CGG - chr4.1:10323010-10323029 MS.gene57298:intron 50.0%
TGGGCTGATCCTGCAAGTTA+CGG - chr4.1:10323222-10323241 MS.gene57298:intron 50.0%
TTGGACTAAGTATGCCTCGG+TGG - chr4.1:10323197-10323216 MS.gene57298:intron 50.0%
! CATTCTGGAGAAAGAGGCTC+AGG - chr4.1:10323956-10323975 MS.gene57298:intron 50.0%
! GTCGGTCTTCTCTTTTCGGT+AGG - chr4.1:10323890-10323909 MS.gene57298:intron 50.0%
!! TCCAAGCTTGAGAAGGCACT+CGG - chr4.1:10320418-10320437 MS.gene57298:CDS 50.0%
!! TCTGAAGGTGTTGGTGTCTC+TGG + chr4.1:10323996-10324015 None:intergenic 50.0%
!! TGCTGGTTCCAAGCTTGAGA+AGG - chr4.1:10320411-10320430 MS.gene57298:CDS 50.0%
!! TTCTATGAGAGCATTGGGCC+CGG - chr4.1:10325337-10325356 MS.gene57298:CDS 50.0%
ACCGAGTGCCTTCTCAAGCT+TGG + chr4.1:10320422-10320441 None:intergenic 55.0%
CTAAGTATGCCTCGGTGGCT+TGG - chr4.1:10323202-10323221 MS.gene57298:intron 55.0%
CTCGGTGACCAATTCCCTGA+AGG - chr4.1:10320436-10320455 MS.gene57298:CDS 55.0%
GCAAAGGGTTCCAATCCTGC+GGG - chr4.1:10323011-10323030 MS.gene57298:intron 55.0%
TCCGCCGTGCAAACGTTCTT+TGG - chr4.1:10325268-10325287 MS.gene57298:CDS 55.0%
TGGCTCGACGGATCTTAGAC+AGG + chr4.1:10322778-10322797 None:intergenic 55.0%
TTGGCAGTGGTCCCAACCAT+GGG - chr4.1:10325170-10325189 MS.gene57298:intron 55.0%
! AGGCATGCGGTTTTCACCCT+CGG - chr4.1:10322554-10322573 MS.gene57298:intron 55.0%
! GTGCCGCTATGGCCACTATA+TGG + chr4.1:10320951-10320970 None:intergenic 55.0%
!! TGAGGAGTGTGTGTTGGCTC+TGG - chr4.1:10323267-10323286 MS.gene57298:intron 55.0%
GTTGGCAGTGGTCCCAACCA+TGG - chr4.1:10325169-10325188 MS.gene57298:intron 60.0%
! TGGGCGTGAGGAGTGTGTGT+TGG - chr4.1:10323261-10323280 MS.gene57298:intron 60.0%
AGGATCAGCCCAAGCCACCG+AGG + chr4.1:10323214-10323233 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 10320403 10325372 10320403 ID=MS.gene57298
chr4.1 mRNA 10320403 10325372 10320403 ID=MS.gene57298.t1;Parent=MS.gene57298
chr4.1 exon 10325256 10325372 10325256 ID=MS.gene57298.t1.exon1;Parent=MS.gene57298.t1
chr4.1 CDS 10325256 10325372 10325256 ID=cds.MS.gene57298.t1;Parent=MS.gene57298.t1
chr4.1 exon 10324406 10324522 10324406 ID=MS.gene57298.t1.exon2;Parent=MS.gene57298.t1
chr4.1 CDS 10324406 10324522 10324406 ID=cds.MS.gene57298.t1;Parent=MS.gene57298.t1
chr4.1 exon 10323618 10323716 10323618 ID=MS.gene57298.t1.exon3;Parent=MS.gene57298.t1
chr4.1 CDS 10323618 10323716 10323618 ID=cds.MS.gene57298.t1;Parent=MS.gene57298.t1
chr4.1 exon 10321675 10321863 10321675 ID=MS.gene57298.t1.exon4;Parent=MS.gene57298.t1
chr4.1 CDS 10321675 10321863 10321675 ID=cds.MS.gene57298.t1;Parent=MS.gene57298.t1
chr4.1 exon 10321329 10321510 10321329 ID=MS.gene57298.t1.exon5;Parent=MS.gene57298.t1
chr4.1 CDS 10321329 10321510 10321329 ID=cds.MS.gene57298.t1;Parent=MS.gene57298.t1
chr4.1 exon 10320403 10320808 10320403 ID=MS.gene57298.t1.exon6;Parent=MS.gene57298.t1
chr4.1 CDS 10320403 10320808 10320403 ID=cds.MS.gene57298.t1;Parent=MS.gene57298.t1
Gene Sequence

>MS.gene57298

ATGGGTGCTGCTGGTTCCAAGCTTGAGAAGGCACTCGGTGACCAATTCCCTGAAGGAGAACGTTACTTTGGTCTTGAGAATTTCGGCAATACTTGTTATTGTAACAGCGTTTTACAGGTTTTAATCGATTCTTTTTAATCTTCTATTTTCCAATCCGATTCATTCTAAATCGTAGTGAATTTGCTTTCTTTGATTGTTTATTCATGATTCATACACATCGTTAATTGTAACCATTTTTTTCTTTTCTGAATTTATGTTGACTTGTCCAAACAAATTTTTGAAGAGTTTAATTGTTGAATAATCTATAAGGATTTTTGTTATTTACCTGTTTGGATTTGATTATTTGAGTTTATCTAATGACACAAGTCCTTGTGAGACTGTTTGGGAAAACTTATTAAAGCAATTTATGATATGTTTATAAGTTGTTTTCACTTATTTTCATAAGCTCTTCAAGATAACTTCTATAAACAGCTTATATGTTATATGTAAACAGTTTTAATTTAATCTATTTTTTGTTATATAATTATTTTTAGATAATAGGGTTGCCATATAGTGGCCATAGCGGCACTGTAACACTATAGAGTAGCCGAATTTAGACTAATCGCTATAATGGCTATTGCAGTTGTGTTGTAGCATAGTAGAATTTGAACAAACCGTTGTTTTTTGTGATTTGCAATCGACAACACTGCACAGAATCGCTTATATGACAATCACTTAATTAAGTTGTTCTTCCAAACAGGCCTAATTATGATTCTAAGTATTAAGTTTGAAGATGGGTTTGTTTGTTATATTTTTGTGGAGATTTCTGGGCTGTTCAGCATCATGTTACTCATTTTTCTACCTTCTGCAGGCACTATACTTTTGTGTTCCATTTCGGGAACAACTGCTGGAGTATTATGGAAATAACAAAACCTTAGGGGATGCGGAAGAAAATCTTTTGACTTGCTTAGCTGACTTGTTTTCACAGGTAATCAATTTGTAGTTTGGAAATTTTGTGCATTACATGGATGACGCCTCTATGCTTTTTCATATTTGATTGACTGAAGCATGATTCACAGTTTGATAGTTTGCATTGTCTTCACTAATTTCGGCGGCTATGATTCATGCTTTGGACTCTTGTCAAAGATGCTGCCGACTTCCCAGCCTTGCATTCTTCTTCCTCTTCTTTCATTTGGTCTTCAAACAAGTGTTTTTTTTATCTGAATGCCTCACAGTGGTTTTTGCTATCCTTAGTTTTGGTTTTAAAACCATATTTTCTTTAATAACATATCCTACCAGATTTTCTTATTTTTTATTTCCTTTTTCTGTTATTGTTTGTGTGTTGAAGGAGAATTTGTCAGGCATGAGACAAACAAGTTGAGAATAAAAGATAGGGTTACTGAATAAAAATGTAAATAAGTCTTTTGTAACTGATCATAGAAGCTGCACCATGATTATCTAGCATCTGGAAAGTATGAAAATTAGTCGTTGCAAATTTTAAAATCAGCGTGATACATAAGACATCCAACAATAGAGTTTACTTTGTGAGGTTTGTGAACCTGAAACAAATCATTTGTATAAATCCTATCAAGTATCAACTATATCTTGGTGTCATTTACATGCTTAGTTATGTCTTTCTTGATCCTGAATTCAACATATTTATTTCTGTTGGTATAGATAAGTTCGCAGAAGAAGAAAACCGGTGTCATTGCTCCCAAACGATTTGTACAGAGGTTGAAAAAACAGAATGAACTCTTTCGTAGCTATATGCATCAGGTATGTACTCTACCATAAGTGTTAAGAATAAGTTCCTGTACATCGAATTGTTATTCATGAGTTCTGTAAAAACTGTTGACAGTGACATTTAGATTATAAAGTATAAATATAAATAAGACATTAGTTTGGATATGGGTTTGTATGCAGCGTTCGGCTATGTTACTTGTCACTCCATGATTATGCAAAGATGCAAGTAGGTGTTGCTCCATGTTTATTTACATTTCCTTGCTTCGAACTTTCAGCTTTTCTGCACATGAATCCTAGTTAGAGATGCTATTATCTATATTGGATGTTTCCAGATGGTAATGTTGTGAGCCTGACAACAAGTATTTCGGTTGGTAGATCATTAGGCAGACCAGTGTTACTTTTTTATTCTGTCAGGTTGGACCAAATTCAAGGCATGCGGTTTTCACCCTCGGAATTGTTCCAAGCTTTTTTTAATTCACAAAAACATTTAAGGTTGTTAGCATGTTAACATTTACTTTATGTTGACAGTCTCACATTTGATGTGATATGGCCCCTGAAAAATTATTTATAAGCGGGAGGCATCTCTCACCTTACAAGCTAGTTTTGTAGGGTGAATTAACACCAATCCAAAATTTGAGATGGTGTCAGAGCCTGTCTAAGATCCGTCGAGCCACCTGTTTTGAATCCACTCAGGTCAATTGGATCAGCCCAACACATGTTGAAGCTGAAAGCAAATTCTAAGATGAGGCCTTTAAATGCTTAAGTTAAAAATATAATAATTTGCAACAAAAAAAATATAAAATATACATCACTATGTATAAAATAAAAAAGTCAATCAGATATTTATTTGTGATGCAGTGGTTTAGCTTGCTTGTTTTTCTCAATTGCAAAGGGTTCCAATCCTGCGGGTAGTAATTTTTGGGCATTATTTTTTGTAAAGAAATACGATAATGCAGAAAAGGCTTATCCAAGAATTGAATGTAAGTTTTACCTGCAAAACAAAGGCAAACCACTGTGTCATTATAAACATTTGCAATATCATTGGACAGCACAATATATGGAAATCCACCACTTGGACTAAGTATGCCTCGGTGGCTTGGGCTGATCCTGCAAGTTACGGTCTAGATGTTCATTCATGGGCGTGAGGAGTGTGTGTTGGCTCTGGTGAGAGTCCCACAAGAGTCAACACAAATTTATAACCTGAAGGGTATTTATAAGTGGGTCCCACCAGAGTCAACACAAATTTATAACATGAAAAAGTAGTTATAAGTGGGAGACATTCTTCACCTTACAAGTTGGTTTTGTATGGTTGAGTTAGGTCCGACCAAATTAAGACTTTAGATATGATCTTTATTAACTATTATTATATATCCGGTGGAATCATAATCTTTTCCATGTCACAACTCACAACCATCCCTTATCACTTTACATTATTAAGCCTGCTAATAGATTTGGCTGCATATCACTGTTATACTGATGGTGATACCAATTAGTTTTTTTTTCTTTTCTTTTCCTTTTCATTCTATGATGAAATAATTCTGTAACTGATGTTGGGTGTCTGTTTAGCAGAAATTACAACAATTTGTTACTTGCAGATGAGATTGTAGTTTACCATGAATTTTCACTGTAGCATACAAGTTTATTCATTATTATTATTATTATTATTATTATCATTGATTGTTTATAGTCTGTTAATTTTAATGTATCATTGGTTGCACAGTACCTCATATTTTGTCTAGTTTCTAACTAATACAACAATGTTACTGTCGGTCTTCTCTTTTCGGTAGGATGCCCACGAATTCTTGAACTTTTTACTGAATGAACTTGTCGACATTCTGGAGAAAGAGGCTCAGGCTGCAAAGACTGATCCAGAGACACCAACACCTTCAGAAAAGGTTGCAAATGGGTTCAAGAATGGTCATGCTAATGGACCTAAGAAAGAGCCTTTAATTACTTGGGTACACAAAAACTTTCAGGTGACCTGCTTTGCCAATTTTTTTTTGTCATTTTTTTTTGTTGTTGCAACAAATTTGGAGGAAGTATAAATTGTGAACTTTGTAATGGATACAGTTTGTTGATCACAAAATTTAGATTTATATCTATATTGTGGAATTTCATTGTTGCAAGTTGTTGTGACCAGGGAATACTCACCAATGAGACAAGGTGCTTGCAATGTGAAACTGTGACAGCTAGGGACGAAACATTTTTTGACTTGAGCCTTGATATTGAGCAAAACAGTTCAATTACAAGCTGTTTGAAAAATTTCAGTTCCACTGAGACGTTGAATGCGGAGGACAAATTTTTCTGTGACAAGTGCTGCAGGTATATGCTTTTATATTGTGGCATCAGCTGTTACTTGGTTTCTCGATTGGTTGGGAAAATGTAAACTGTCTGTTGTCAACCATTTTGAGTCATGTGCTTGGCTAAACGATGCTACTGCTTGTTTAACATGGATTTCAATTGATGCATTAGACTTTATCAAAAACCAAATTTTCAGATATCTGTTCAGATCTAGATCATTTTAGTAGTTTCCTGTAAAGGTTTTTTACGCCATTGTTTTCTACTTTTAACTGGAGAGGGAAATAAAATAAATGTGGTGACTCATATGTCAAATTGTTTGAATATCATGTATATTTTTGGACATTTTATCTCCTTTTCATTTTCAACAAGCAAACCGTAACATGTTTGTTTTTCCATTGATTGGCACTTCATTTGTTTTCTGAACGGGATTTCTTGGTCATGTTAGTTCAGTGTGTACAAATATATATGCACTCTTTTCCTCTGTTTTTCATGCCCATTTACCAATCTAGTGACCAAGGTGCAAACTTTCTTTTGGTATTAGTTTGCAAGAAGCTCAGAAGAGAATGAAGATAAAGAAACCTCCTCACATTCTGGTCATTCATCTCAAGCGGTTTAAATACATGGAACAGCTGGGCCGCTACAAGAAGTTGTCTTACCGAGTTGTTTTTCCCCTTGAGCTGAAGCTGAGTAATACTGTTGAAGATGCAGATATTGAGTATTCTCTATTTGCGGTAGTTGTTCATGTTGGCAGTGGTCCCAACCATGGGCATTATGTCAGCCTTGTGAAAAGCCATAACCACTGGTTATTTTTTGATGACGAAAATGTTGAGATGATTGATGAGTCCGCCGTGCAAACGTTCTTTGGATCACCACAGGAATATTCAACTAACACCGACCATGGGTACATTTTGTTCTATGAGAGCATTGGGCCCGGTAACAGTAACTAG
Protein sequence

>MS.gene57298.t1

MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKTLGDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAAKTDPETPTPSEKVANGFKNGHANGPKKEPLITWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSPQEYSTNTDHGYILFYESIGPGNSN