AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62120.t1 MTR_8g064200 83.003 353 60 0 1 353 10 362 0.0 615
MS.gene62120.t1 MTR_8g064200 83.003 353 60 0 1 353 5 357 0.0 615
MS.gene62120.t1 MTR_5g048470 79.661 354 71 1 1 353 5 358 0.0 591
MS.gene62120.t1 MTR_5g055680 67.705 353 113 1 2 354 1 352 0.0 519
MS.gene62120.t1 MTR_0009s0050 65.439 353 121 1 2 354 1 352 1.78e-179 501
MS.gene62120.t1 MTR_0009s0050 65.439 353 121 1 2 354 1 352 2.32e-179 501
MS.gene62120.t1 MTR_0328s0030 66.860 344 113 1 7 350 4 346 2.26e-177 496
MS.gene62120.t1 MTR_5g055900 65.706 347 118 1 5 351 4 349 8.63e-177 494
MS.gene62120.t1 MTR_5g048570 64.857 350 120 2 5 354 4 350 1.29e-176 494
MS.gene62120.t1 MTR_5g048850 66.571 347 115 1 6 352 5 350 2.39e-174 488
MS.gene62120.t1 MTR_0009s0480 64.470 349 122 2 6 353 3 350 6.68e-174 487
MS.gene62120.t1 MTR_0056s0160 97.046 237 7 0 118 354 1 237 5.97e-173 480
MS.gene62120.t1 MTR_5g048550 66.856 353 116 1 2 354 1 352 8.74e-173 484
MS.gene62120.t1 MTR_5g048740 65.130 347 119 2 7 352 4 349 8.80e-172 482
MS.gene62120.t1 MTR_5g055820 63.977 347 123 2 6 351 5 350 9.62e-169 474
MS.gene62120.t1 MTR_5g055690 63.689 347 124 2 6 351 5 350 4.78e-167 470
MS.gene62120.t1 MTR_5g055800 62.751 349 126 3 6 352 3 349 7.23e-163 459
MS.gene62120.t1 MTR_2g072910 60.057 348 138 1 6 352 9 356 7.23e-156 442
MS.gene62120.t1 MTR_2g072890 59.599 349 139 2 6 352 9 357 1.71e-153 436
MS.gene62120.t1 MTR_5g048850 68.914 267 82 1 6 272 5 270 3.04e-135 386
MS.gene62120.t1 MTR_0009s0480 67.790 267 84 2 6 271 3 268 1.91e-134 384
MS.gene62120.t1 MTR_1g033810 52.958 355 159 4 2 353 5 354 9.28e-132 380
MS.gene62120.t1 MTR_0009s0050 66.265 249 84 0 106 354 6 254 8.70e-131 374
MS.gene62120.t1 MTR_0009s0050 66.532 248 83 0 106 353 6 253 1.17e-130 374
MS.gene62120.t1 MTR_5g055690 65.918 267 89 2 6 271 5 270 4.36e-128 368
MS.gene62120.t1 MTR_2g072910 57.778 270 113 1 6 274 9 278 2.37e-112 328
MS.gene62120.t1 MTR_7g063730 40.517 348 205 2 8 354 23 369 6.26e-99 297
MS.gene62120.t1 MTR_7g062570 39.710 345 206 2 8 351 14 357 1.56e-96 291
MS.gene62120.t1 MTR_2g437380 42.029 345 195 3 11 351 14 357 2.21e-96 291
MS.gene62120.t1 MTR_3g026150 41.311 351 200 4 3 350 13 360 3.82e-96 290
MS.gene62120.t1 MTR_7g062580 38.551 345 210 2 8 351 14 357 1.26e-93 284
MS.gene62120.t1 MTR_7g062600 39.368 348 208 3 8 353 10 356 2.78e-91 278
MS.gene62120.t1 MTR_7g062550 38.040 347 213 2 8 353 19 364 2.00e-89 273
MS.gene62120.t1 MTR_0009s0050 66.082 171 58 0 183 353 1 171 1.04e-86 259
MS.gene62120.t1 MTR_5g082750 36.842 342 210 3 14 349 14 355 5.09e-82 254
MS.gene62120.t1 MTR_7g068650 36.023 347 209 4 14 348 15 360 3.72e-79 246
MS.gene62120.t1 MTR_0009s0400 69.388 147 45 0 207 353 1 147 1.17e-77 235
MS.gene62120.t1 MTR_2g437380 42.586 263 150 1 90 351 1 263 6.24e-77 238
MS.gene62120.t1 MTR_7g045650 39.576 283 169 2 4 285 15 296 1.69e-76 238
MS.gene62120.t1 MTR_3g026150 42.279 272 152 3 3 271 13 282 8.38e-75 233
MS.gene62120.t1 MTR_4g015790 32.609 368 228 3 1 348 1 368 1.73e-74 235
MS.gene62120.t1 MTR_7g062560 34.203 345 213 5 8 350 21 353 3.21e-73 231
MS.gene62120.t1 MTR_3g070860 33.041 342 223 3 14 349 15 356 4.54e-73 231
MS.gene62120.t1 MTR_3g117420 36.991 319 195 4 34 350 40 354 8.01e-72 228
MS.gene62120.t1 MTR_3g026150 41.176 255 149 1 96 350 4 257 1.40e-71 224
MS.gene62120.t1 MTR_3g063180 34.483 348 216 6 14 352 10 354 2.09e-69 221
MS.gene62120.t1 MTR_3g092890 36.585 328 203 3 23 349 13 336 3.63e-69 220
MS.gene62120.t1 MTR_5g065010 36.390 349 202 10 13 350 3 342 3.94e-69 220
MS.gene62120.t1 MTR_8g074070 35.942 345 210 5 13 350 14 354 2.92e-66 213
MS.gene62120.t1 MTR_8g074050 35.652 345 211 5 13 350 14 354 2.75e-65 211
MS.gene62120.t1 MTR_4g116010 35.714 308 188 5 48 352 50 350 5.88e-62 202
MS.gene62120.t1 MTR_8g024120 32.903 310 201 4 44 350 38 343 2.89e-61 200
MS.gene62120.t1 MTR_8g074070 35.072 345 194 6 13 350 14 335 3.91e-61 199
MS.gene62120.t1 MTR_1g062110 31.921 354 217 7 14 350 27 373 8.86e-61 200
MS.gene62120.t1 MTR_0009s0410 62.025 158 58 2 6 162 3 159 1.56e-60 192
MS.gene62120.t1 MTR_4g087090 33.721 344 202 8 26 350 8 344 2.00e-60 198
MS.gene62120.t1 MTR_3g072810 31.532 333 219 4 9 337 1 328 1.68e-57 190
MS.gene62120.t1 MTR_3g091350 34.431 334 202 8 25 349 35 360 3.34e-57 190
MS.gene62120.t1 MTR_7g102820 30.000 350 220 7 22 350 35 380 3.79e-57 190
MS.gene62120.t1 MTR_5g011250 33.746 323 199 6 14 322 8 329 9.93e-57 188
MS.gene62120.t1 MTR_2g072930 57.051 156 66 1 6 160 9 164 6.51e-56 181
MS.gene62120.t1 MTR_1g034120 33.766 308 172 8 41 322 19 320 9.24e-56 186
MS.gene62120.t1 MTR_3g088565 35.667 300 178 5 48 339 3 295 1.07e-55 184
MS.gene62120.t1 MTR_4g093840 32.194 351 219 8 13 350 22 366 8.42e-55 184
MS.gene62120.t1 MTR_1g034060 33.657 309 171 8 41 322 19 320 1.14e-54 183
MS.gene62120.t1 MTR_1g093120 33.333 339 207 9 23 350 40 370 3.63e-54 182
MS.gene62120.t1 MTR_8g009170 32.670 352 217 10 10 350 24 366 7.60e-54 181
MS.gene62120.t1 MTR_8g009160 32.659 346 213 10 10 345 24 359 1.03e-53 181
MS.gene62120.t1 MTR_5g059130 30.746 335 221 7 9 337 4 333 2.50e-53 179
MS.gene62120.t1 MTR_2g102570 31.832 333 208 7 22 343 25 349 9.07e-53 179
MS.gene62120.t1 MTR_8g009090 32.558 344 212 10 10 343 24 357 2.40e-52 177
MS.gene62120.t1 MTR_8g009110 32.174 345 217 10 10 345 24 360 2.98e-52 177
MS.gene62120.t1 MTR_2g069090 31.672 341 222 5 10 343 29 365 3.89e-52 177
MS.gene62120.t1 MTR_2g025120 30.033 303 197 6 46 342 2 295 7.11e-52 175
MS.gene62120.t1 MTR_3g091360 32.822 326 205 6 35 353 39 357 7.61e-52 176
MS.gene62120.t1 MTR_8g028435 31.871 342 217 8 10 343 24 357 1.07e-51 176
MS.gene62120.t1 MTR_2g069300 29.598 348 234 5 10 350 15 358 2.18e-51 174
MS.gene62120.t1 MTR_3g083370 30.333 300 192 6 49 342 5 293 2.61e-51 173
MS.gene62120.t1 MTR_3g117485 33.127 323 203 6 13 325 12 331 2.71e-51 174
MS.gene62120.t1 MTR_7g105070 29.345 351 226 10 14 352 24 364 3.37e-51 174
MS.gene62120.t1 MTR_5g085330 31.683 303 188 6 49 342 6 298 4.14e-51 173
MS.gene62120.t1 MTR_8g009080 30.682 352 228 8 10 352 55 399 6.99e-51 174
MS.gene62120.t1 MTR_8g008930 31.778 343 217 9 10 343 24 358 7.88e-51 173
MS.gene62120.t1 MTR_1g093110 31.579 342 214 8 22 350 40 374 1.03e-50 173
MS.gene62120.t1 MTR_8g041620 30.000 350 226 8 14 351 33 375 9.34e-50 171
MS.gene62120.t1 MTR_1g034140 32.399 321 190 8 29 331 8 319 9.65e-50 170
MS.gene62120.t1 MTR_5g059140 32.026 306 193 8 23 319 16 315 1.81e-49 169
MS.gene62120.t1 MTR_7g081710 28.653 349 228 8 13 350 13 351 1.93e-49 169
MS.gene62120.t1 MTR_5g032870 34.416 308 185 7 48 345 38 338 1.98e-49 169
MS.gene62120.t1 MTR_4g087140 32.390 318 180 10 32 322 10 319 2.34e-49 169
MS.gene62120.t1 MTR_4g087110 33.134 335 194 8 32 342 10 338 2.54e-49 169
MS.gene62120.t1 MTR_8g041600 30.286 350 225 8 14 351 33 375 2.83e-49 170
MS.gene62120.t1 MTR_3g072820 31.731 312 202 8 25 330 18 324 3.97e-49 168
MS.gene62120.t1 MTR_4g087120 32.099 324 190 8 32 331 10 327 1.01e-48 167
MS.gene62120.t1 MTR_1g048940 30.769 364 222 11 3 352 5 352 1.21e-48 167
MS.gene62120.t1 MTR_4g117880 31.611 329 210 9 10 330 24 345 2.73e-48 167
MS.gene62120.t1 MTR_8g075890 30.769 286 191 4 29 309 20 303 3.33e-48 166
MS.gene62120.t1 MTR_1g093140 28.818 347 221 8 22 350 40 378 9.62e-48 166
MS.gene62120.t1 MTR_2g069210 29.598 348 233 6 10 350 25 367 1.31e-47 165
MS.gene62120.t1 MTR_3g043900 31.034 348 217 9 14 350 18 353 1.87e-47 164
MS.gene62120.t1 MTR_7g016090 31.776 321 204 7 23 337 16 327 2.44e-47 163
MS.gene62120.t1 MTR_7g016090 31.776 321 204 7 23 337 14 325 2.59e-47 163
MS.gene62120.t1 MTR_3g045230 33.036 336 203 9 26 350 30 354 2.77e-47 164
MS.gene62120.t1 MTR_7g102720 32.808 317 189 8 44 350 33 335 2.97e-47 163
MS.gene62120.t1 MTR_8g033380 32.692 312 194 5 22 322 30 336 4.03e-47 164
MS.gene62120.t1 MTR_1g032140 31.395 344 219 9 14 349 30 364 4.28e-47 164
MS.gene62120.t1 MTR_1g102070 31.494 308 198 5 25 322 38 342 5.02e-47 164
MS.gene62120.t1 MTR_5g032880 32.476 311 183 5 39 337 29 324 6.11e-47 169
MS.gene62120.t1 MTR_5g032880 31.987 297 195 5 48 338 376 671 3.61e-42 156
MS.gene62120.t1 MTR_8g075830 31.852 270 177 4 45 309 36 303 6.74e-47 163
MS.gene62120.t1 MTR_2g069190 30.769 338 222 6 13 343 32 364 8.15e-47 163
MS.gene62120.t1 MTR_4g087100 34.266 286 164 6 32 296 10 292 8.31e-47 162
MS.gene62120.t1 MTR_8g062600 30.000 350 223 10 14 350 33 373 1.04e-46 163
MS.gene62120.t1 MTR_0032s0040 29.799 349 224 9 10 343 24 366 5.28e-46 161
MS.gene62120.t1 MTR_6g464620 32.281 285 182 4 48 322 64 347 9.68e-46 160
MS.gene62120.t1 MTR_2g019370 31.410 312 191 9 41 339 21 322 1.47e-45 159
MS.gene62120.t1 MTR_5g022020 31.481 270 178 4 45 309 36 303 2.16e-45 159
MS.gene62120.t1 MTR_3g117485 34.263 251 161 3 78 325 10 259 7.92e-45 155
MS.gene62120.t1 MTR_1g070135 32.333 300 188 6 45 337 35 326 1.17e-44 157
MS.gene62120.t1 MTR_3g058610 31.852 270 177 5 45 309 36 303 1.17e-44 157
MS.gene62120.t1 MTR_1g081840 33.916 286 168 5 47 317 52 331 1.29e-44 157
MS.gene62120.t1 MTR_2g068840 29.683 347 229 5 13 350 21 361 1.52e-44 157
MS.gene62120.t1 MTR_7g016080 30.091 329 193 7 23 337 14 319 2.82e-44 155
MS.gene62120.t1 MTR_6g015950 30.312 320 211 6 23 337 14 326 6.95e-44 154
MS.gene62120.t1 MTR_1g043810 29.651 344 229 7 14 350 20 357 7.17e-44 155
MS.gene62120.t1 MTR_1g070080 31.879 298 188 6 45 335 35 324 7.35e-44 154
MS.gene62120.t1 MTR_4g024660 27.874 348 233 7 14 350 33 373 7.70e-44 155
MS.gene62120.t1 MTR_2g068950 27.795 331 222 6 14 332 27 352 7.92e-44 155
MS.gene62120.t1 MTR_2g068960 28.701 331 219 7 14 332 27 352 1.04e-43 155
MS.gene62120.t1 MTR_1g043770 31.045 335 220 5 14 343 20 348 1.39e-43 154
MS.gene62120.t1 MTR_1g062110 32.000 300 179 8 13 294 26 318 1.42e-43 153
MS.gene62120.t1 MTR_3g088745 31.922 307 175 9 26 315 23 312 4.34e-43 153
MS.gene62120.t1 MTR_2g069010 27.606 355 233 8 14 353 33 378 6.46e-43 153
MS.gene62120.t1 MTR_7g056347 27.429 350 234 7 13 350 32 373 9.40e-43 152
MS.gene62120.t1 MTR_1g070085 29.141 326 223 4 19 340 8 329 1.36e-42 151
MS.gene62120.t1 MTR_1g070085 29.141 326 223 4 19 340 8 329 1.36e-42 151
MS.gene62120.t1 MTR_3g096500 32.226 301 191 6 25 315 45 342 1.48e-42 152
MS.gene62120.t1 MTR_2g069020 28.955 335 218 7 14 336 31 357 1.50e-42 152
MS.gene62120.t1 MTR_2g069020 28.612 353 231 8 14 354 31 374 1.93e-42 152
MS.gene62120.t1 MTR_1g032250 31.395 344 213 12 10 342 33 364 2.12e-42 151
MS.gene62120.t1 MTR_1g032220 30.145 345 230 7 10 349 33 371 3.43e-42 151
MS.gene62120.t1 MTR_1g043760 29.738 343 215 9 14 343 20 349 6.43e-42 150
MS.gene62120.t1 MTR_4g087130 32.581 310 188 6 41 331 19 326 1.27e-41 149
MS.gene62120.t1 MTR_1g070120 29.412 323 213 6 22 337 12 326 1.43e-41 148
MS.gene62120.t1 MTR_2g069060 28.571 308 205 6 39 339 40 339 2.36e-41 148
MS.gene62120.t1 MTR_7g029655 28.035 346 225 9 13 343 27 363 2.50e-41 149
MS.gene62120.t1 MTR_4g123020 32.381 315 185 10 48 349 20 319 2.79e-41 147
MS.gene62120.t1 MTR_2g083030 31.731 312 188 10 27 330 16 310 3.50e-41 147
MS.gene62120.t1 MTR_1g043775 28.488 344 233 7 14 350 20 357 1.27e-40 146
MS.gene62120.t1 MTR_8g063070 27.300 337 231 6 14 341 33 364 1.89e-40 146
MS.gene62120.t1 MTR_8g009120 31.105 344 206 10 10 343 24 346 2.82e-40 145
MS.gene62120.t1 MTR_2g083000 30.508 295 182 10 30 316 15 294 4.58e-40 144
MS.gene62120.t1 MTR_8g461330 30.696 316 187 10 42 339 21 322 7.13e-40 144
MS.gene62120.t1 MTR_8g009170 33.333 282 170 9 10 282 24 296 1.61e-39 142
MS.gene62120.t1 MTR_1g011580 30.690 290 178 8 48 330 63 336 2.95e-39 143
MS.gene62120.t1 MTR_2g070870 31.293 294 177 10 29 314 14 290 3.11e-39 142
MS.gene62120.t1 MTR_4g115990 29.866 298 182 6 48 342 46 319 8.08e-39 140
MS.gene62120.t1 MTR_6g092620 28.520 277 184 4 48 318 3 271 1.07e-38 140
MS.gene62120.t1 MTR_8g009150 28.205 351 213 8 10 350 24 345 1.27e-38 140
MS.gene62120.t1 MTR_8g469400 27.841 352 215 10 14 350 33 360 1.53e-38 141
MS.gene62120.t1 MTR_7g451860 32.830 265 151 8 47 298 40 290 4.94e-38 139
MS.gene62120.t1 MTR_7g047670 32.830 265 151 8 47 298 40 290 4.94e-38 139
MS.gene62120.t1 MTR_4g119410 27.635 351 230 10 14 350 33 373 1.82e-37 138
MS.gene62120.t1 MTR_8g093930 28.349 321 213 6 23 332 24 338 1.88e-37 138
MS.gene62120.t1 MTR_2g033270 31.212 330 196 14 37 349 1 316 1.72e-36 134
MS.gene62120.t1 MTR_4g096840 29.433 282 183 8 70 339 45 322 1.90e-36 134
MS.gene62120.t1 MTR_8g006930 26.879 346 239 7 14 350 33 373 2.84e-36 135
MS.gene62120.t1 MTR_2g025120 29.437 231 149 5 46 271 2 223 5.43e-36 130
MS.gene62120.t1 MTR_1g070185 27.324 355 241 8 2 350 24 367 5.68e-36 134
MS.gene62120.t1 MTR_5g005570 31.439 264 153 8 47 298 36 283 7.40e-36 133
MS.gene62120.t1 MTR_4g074130 30.403 273 178 7 31 298 23 288 1.28e-35 132
MS.gene62120.t1 MTR_7g056393 26.389 360 245 10 2 350 23 373 6.51e-35 131
MS.gene62120.t1 MTR_3g464530 31.179 263 158 7 45 298 31 279 8.03e-35 130
MS.gene62120.t1 MTR_8g009080 31.461 267 170 7 10 270 55 314 9.18e-35 130
MS.gene62120.t1 MTR_7g078010 27.108 332 228 8 14 336 33 359 1.30e-34 130
MS.gene62120.t1 MTR_1g070085 32.804 189 126 1 152 340 64 251 4.73e-34 126
MS.gene62120.t1 MTR_3g083370 28.821 229 147 5 49 271 5 223 6.12e-34 125
MS.gene62120.t1 MTR_8g009080 31.439 264 168 7 10 267 55 311 1.44e-33 127
MS.gene62120.t1 MTR_2g068800 29.391 279 167 5 13 284 21 276 1.24e-32 123
MS.gene62120.t1 MTR_8g041600 29.699 266 172 7 14 271 33 291 2.07e-32 123
MS.gene62120.t1 MTR_1g070100 32.258 186 125 1 152 337 60 244 3.31e-32 121
MS.gene62120.t1 MTR_1g086550 27.434 339 214 10 36 353 8 335 7.52e-32 122
MS.gene62120.t1 MTR_4g132770 38.346 133 80 1 204 334 26 158 4.03e-31 115
MS.gene62120.t1 MTR_1g070135 31.890 254 158 6 25 271 15 260 1.07e-30 118
MS.gene62120.t1 MTR_3g040410 29.316 307 192 11 48 344 6 297 1.84e-30 118
MS.gene62120.t1 MTR_1g043810 30.268 261 172 6 14 270 20 274 1.87e-30 118
MS.gene62120.t1 MTR_1g043770 31.154 260 171 4 13 270 19 272 2.30e-30 117
MS.gene62120.t1 MTR_2g069060 28.745 247 162 5 31 271 10 248 1.01e-29 115
MS.gene62120.t1 MTR_1g027290 28.869 336 206 13 35 350 16 338 4.68e-29 115
MS.gene62120.t1 MTR_8g009180 35.227 176 108 4 172 343 114 287 1.16e-28 113
MS.gene62120.t1 MTR_1g043775 29.008 262 176 6 13 270 19 274 2.09e-28 112
MS.gene62120.t1 MTR_3g464530 30.932 236 140 7 45 271 31 252 7.23e-28 109
MS.gene62120.t1 MTR_7g056353 23.977 342 218 6 14 346 35 343 6.13e-27 111
MS.gene62120.t1 MTR_8g093980 27.682 289 195 5 39 317 50 334 9.36e-27 109
MS.gene62120.t1 MTR_5g025090 26.518 313 204 8 46 350 3 297 4.26e-25 103
MS.gene62120.t1 MTR_1g027310 27.491 291 160 10 44 327 45 291 2.26e-24 102
MS.gene62120.t1 MTR_7g078010 26.820 261 183 6 14 271 33 288 6.50e-24 100
MS.gene62120.t1 MTR_4g011720 29.373 303 197 9 45 338 6 300 1.83e-23 99.4
MS.gene62120.t1 MTR_4g100600 28.155 309 196 12 44 335 5 304 2.55e-23 99.0
MS.gene62120.t1 MTR_8g030880 30.268 261 162 9 48 298 10 260 3.28e-23 98.6
MS.gene62120.t1 MTR_7g077670 30.996 271 166 10 38 298 1 260 3.36e-23 98.6
MS.gene62120.t1 MTR_1g043840 31.176 170 109 3 168 330 55 223 3.50e-23 99.0
MS.gene62120.t1 MTR_1g070110 29.730 185 99 2 152 336 67 220 2.15e-22 94.7
MS.gene62120.t1 MTR_4g011690 28.990 307 200 10 42 338 3 301 8.63e-21 91.7
MS.gene62120.t1 MTR_4g100590 27.184 309 186 14 48 335 9 299 1.18e-20 91.3
MS.gene62120.t1 MTR_5g027230 25.676 296 194 7 43 330 1 278 2.86e-19 87.4
MS.gene62120.t1 MTR_8g102600 24.918 305 186 15 71 347 32 321 6.12e-19 86.7
MS.gene62120.t1 MTR_6g088665 25.753 299 176 11 71 336 41 326 9.62e-19 86.3
MS.gene62120.t1 MTR_6g088665 26.087 299 176 11 71 336 41 327 1.19e-18 86.3
MS.gene62120.t1 MTR_1g032240 35.570 149 68 6 202 349 56 177 1.41e-17 79.7
MS.gene62120.t1 MTR_7g090520 27.797 295 186 12 39 319 1 282 2.11e-17 82.4
MS.gene62120.t1 MTR_3g108520 25.472 318 203 12 44 340 3 307 7.18e-17 80.9
MS.gene62120.t1 MTR_8g102600 26.291 213 129 10 151 347 71 271 4.52e-15 75.1
MS.gene62120.t1 MTR_4g021380 28.090 178 122 5 167 340 133 308 7.82e-15 74.7
MS.gene62120.t1 MTR_4g011720 29.661 236 149 9 45 271 6 233 4.22e-14 72.0
MS.gene62120.t1 MTR_4g094900 28.261 230 132 6 42 245 2 224 7.83e-14 70.9
MS.gene62120.t1 MTR_4g021360 24.561 285 194 10 47 318 6 282 1.68e-12 67.8
MS.gene62120.t1 MTR_4g132765 25.625 160 109 4 46 204 2 152 1.77e-11 65.9
MS.gene62120.t1 MTR_6g035160 34.286 105 66 3 200 302 27 130 2.22e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62120.t1 AT1G17020 52.722 349 160 4 7 350 10 358 8.88e-138 396
MS.gene62120.t1 AT1G17010 51.989 352 164 4 7 353 10 361 1.27e-132 383
MS.gene62120.t1 AT4G25300 51.576 349 163 5 7 350 9 356 3.71e-130 377
MS.gene62120.t1 AT4G25310 50.862 348 164 4 7 350 9 353 4.44e-127 369
MS.gene62120.t1 AT1G78550 47.262 347 180 3 7 350 10 356 1.90e-121 354
MS.gene62120.t1 AT4G25310 45.821 347 155 4 7 350 9 325 3.87e-105 311
MS.gene62120.t1 AT1G78550 48.905 274 140 0 77 350 5 278 3.32e-102 303
MS.gene62120.t1 AT3G21420 42.165 351 194 4 11 352 14 364 3.66e-97 293
MS.gene62120.t1 AT2G38240 38.123 341 204 3 13 348 11 349 1.02e-87 268
MS.gene62120.t1 AT3G55970 36.023 347 211 5 14 349 14 360 8.30e-76 238
MS.gene62120.t1 AT5G05600 33.628 339 219 3 14 346 27 365 1.08e-75 238
MS.gene62120.t1 AT3G11180 35.294 340 212 4 14 346 56 394 3.47e-75 238
MS.gene62120.t1 AT3G11180 36.709 316 192 4 14 322 56 370 3.34e-73 233
MS.gene62120.t1 AT4G25300 51.309 191 92 1 161 350 72 262 4.30e-68 215
MS.gene62120.t1 AT5G20400 36.061 330 202 6 13 334 8 336 4.31e-68 218
MS.gene62120.t1 AT5G20550 35.952 331 203 7 13 335 8 337 5.82e-66 212
MS.gene62120.t1 AT1G49390 34.796 319 201 5 13 325 8 325 1.35e-65 211
MS.gene62120.t1 AT5G54000 33.837 331 209 5 13 334 8 337 2.46e-64 208
MS.gene62120.t1 AT5G24530 34.783 322 202 4 23 340 13 330 3.89e-63 205
MS.gene62120.t1 AT4G10490 32.934 334 214 6 22 349 15 344 3.47e-62 202
MS.gene62120.t1 AT2G36690 32.479 351 219 7 14 352 21 365 1.81e-61 201
MS.gene62120.t1 AT2G36690 32.479 351 219 7 14 352 21 365 1.81e-61 201
MS.gene62120.t1 AT4G22880 32.869 359 221 7 9 352 2 355 2.83e-61 200
MS.gene62120.t1 AT4G22880 32.869 359 221 7 9 352 2 355 2.83e-61 200
MS.gene62120.t1 AT4G22880 32.869 359 221 7 9 352 2 355 2.83e-61 200
MS.gene62120.t1 AT4G16330 34.304 309 188 6 45 348 64 362 1.34e-59 196
MS.gene62120.t1 AT5G05600 34.848 264 166 3 14 271 27 290 3.63e-59 193
MS.gene62120.t1 AT4G10500 31.818 330 216 6 25 349 20 345 4.11e-59 194
MS.gene62120.t1 AT3G13610 33.333 348 208 11 14 350 27 361 4.07e-58 192
MS.gene62120.t1 AT1G55290 33.235 340 212 7 14 346 26 357 5.04e-58 192
MS.gene62120.t1 AT1G49390 35.772 246 157 1 81 325 1 246 2.08e-56 185
MS.gene62120.t1 AT3G55970 36.431 269 160 5 14 271 14 282 1.45e-55 184
MS.gene62120.t1 AT3G19000 35.922 309 172 7 43 331 27 329 4.30e-55 184
MS.gene62120.t1 AT5G59540 33.616 354 214 11 10 350 21 366 6.08e-55 184
MS.gene62120.t1 AT5G54000 34.241 257 166 2 81 334 1 257 8.22e-55 181
MS.gene62120.t1 AT3G60290 32.759 348 220 9 13 352 15 356 9.36e-55 183
MS.gene62120.t1 AT2G44800 31.884 345 221 8 13 349 15 353 2.54e-54 182
MS.gene62120.t1 AT1G12010 32.781 302 185 6 47 342 6 295 6.39e-53 177
MS.gene62120.t1 AT1G77330 34.323 303 177 6 48 339 3 294 2.51e-52 176
MS.gene62120.t1 AT3G12900 32.174 345 220 9 13 351 21 357 3.30e-52 177
MS.gene62120.t1 AT3G19010 32.927 328 185 8 46 352 26 339 9.98e-52 175
MS.gene62120.t1 AT3G19010 32.927 328 185 8 46 352 26 339 9.98e-52 175
MS.gene62120.t1 AT1G05010 31.373 306 193 7 46 342 2 299 1.05e-51 174
MS.gene62120.t1 AT1G62380 30.897 301 192 7 47 342 6 295 3.56e-50 171
MS.gene62120.t1 AT2G30830 31.858 339 216 8 13 343 20 351 1.34e-49 170
MS.gene62120.t1 AT5G43440 30.618 356 222 7 10 350 20 365 1.99e-49 170
MS.gene62120.t1 AT1G06620 31.356 354 219 8 10 350 23 365 2.15e-49 170
MS.gene62120.t1 AT1G06650 31.445 353 215 9 10 345 22 364 2.86e-49 169
MS.gene62120.t1 AT4G16330 36.638 232 140 3 119 348 30 256 3.42e-49 166
MS.gene62120.t1 AT5G08640 29.688 320 212 6 25 339 19 330 3.61e-49 168
MS.gene62120.t1 AT5G08640 29.688 320 212 6 25 339 19 330 3.61e-49 168
MS.gene62120.t1 AT5G59530 30.641 359 217 8 10 350 20 364 5.10e-49 169
MS.gene62120.t1 AT3G51240 29.210 291 201 3 23 309 13 302 1.82e-48 167
MS.gene62120.t1 AT5G63590 35.252 278 170 6 43 315 9 281 7.91e-48 164
MS.gene62120.t1 AT1G04380 31.871 342 216 6 13 350 17 345 1.05e-47 165
MS.gene62120.t1 AT2G19590 31.683 303 182 8 47 342 10 294 4.00e-47 162
MS.gene62120.t1 AT4G25420 32.971 276 175 3 48 314 61 335 4.00e-46 161
MS.gene62120.t1 AT1G04350 32.471 348 213 11 10 345 18 355 4.56e-46 161
MS.gene62120.t1 AT5G07200 32.903 310 194 6 16 314 28 334 2.32e-45 159
MS.gene62120.t1 AT1G06640 30.595 353 214 10 10 343 22 362 7.66e-45 158
MS.gene62120.t1 AT1G15550 28.614 332 216 8 22 340 27 350 8.28e-45 157
MS.gene62120.t1 AT3G19010 32.258 310 181 9 46 352 26 309 1.18e-44 156
MS.gene62120.t1 AT3G19000 35.743 249 134 7 43 271 27 269 3.72e-44 154
MS.gene62120.t1 AT5G07480 29.483 329 192 8 48 352 44 356 4.88e-44 155
MS.gene62120.t1 AT5G43450 28.613 346 229 6 10 345 20 357 7.33e-44 155
MS.gene62120.t1 AT1G06645 30.857 350 214 11 10 343 35 372 1.99e-43 154
MS.gene62120.t1 AT1G60980 32.343 303 187 6 25 313 36 334 2.43e-43 154
MS.gene62120.t1 AT1G80340 31.922 307 186 9 24 319 26 320 3.15e-43 153
MS.gene62120.t1 AT1G03410 30.435 345 216 11 10 339 16 351 1.74e-42 151
MS.gene62120.t1 AT2G30840 29.446 343 223 8 13 343 20 355 1.76e-42 151
MS.gene62120.t1 AT5G51810 31.373 306 184 7 23 314 40 333 2.03e-42 152
MS.gene62120.t1 AT5G63600 32.258 310 186 10 40 341 23 316 2.46e-42 150
MS.gene62120.t1 AT1G03410 30.725 345 215 11 10 339 53 388 3.46e-42 151
MS.gene62120.t1 AT1G03400 30.357 336 214 8 14 341 20 343 1.41e-41 149
MS.gene62120.t1 AT5G63600 32.154 311 186 11 40 341 23 317 1.93e-41 148
MS.gene62120.t1 AT4G21200 31.469 286 163 10 36 307 30 296 2.36e-41 148
MS.gene62120.t1 AT3G61400 29.282 362 223 11 10 351 21 369 1.71e-40 146
MS.gene62120.t1 AT1G44090 32.166 314 190 9 17 317 37 340 4.74e-40 145
MS.gene62120.t1 AT1G78440 28.664 307 193 9 48 340 18 312 3.51e-39 142
MS.gene62120.t1 AT3G19010 32.000 250 141 6 46 274 26 267 8.61e-39 140
MS.gene62120.t1 AT2G30840 28.571 343 220 9 13 343 20 349 3.64e-38 140
MS.gene62120.t1 AT5G12270 27.381 336 231 5 22 350 30 359 8.43e-38 139
MS.gene62120.t1 AT2G34555 30.795 302 187 10 48 339 27 316 3.03e-37 137
MS.gene62120.t1 AT1G80330 28.440 327 211 9 25 335 19 338 9.67e-37 136
MS.gene62120.t1 AT2G19590 31.408 277 165 8 73 342 21 279 1.32e-36 134
MS.gene62120.t1 AT2G25450 29.275 345 230 7 14 350 21 359 1.74e-36 135
MS.gene62120.t1 AT1G06650 31.429 280 169 6 10 276 22 291 5.91e-36 133
MS.gene62120.t1 AT5G59540 34.191 272 161 10 10 271 21 284 6.99e-36 132
MS.gene62120.t1 AT4G25420 32.618 233 147 3 48 271 61 292 8.31e-36 132
MS.gene62120.t1 AT1G30040 26.797 306 205 8 43 339 26 321 9.23e-36 133
MS.gene62120.t1 AT1G03400 28.022 364 214 9 14 341 20 371 1.19e-35 134
MS.gene62120.t1 AT4G21690 28.617 311 198 8 44 339 43 344 1.28e-35 133
MS.gene62120.t1 AT1G47990 29.412 323 191 12 46 349 13 317 1.52e-35 132
MS.gene62120.t1 AT5G43935 28.763 299 190 8 34 330 5 282 3.10e-35 130
MS.gene62120.t1 AT3G51240 30.233 215 147 2 97 309 5 218 2.60e-34 127
MS.gene62120.t1 AT1G06620 31.734 271 164 7 10 270 23 282 5.18e-34 127
MS.gene62120.t1 AT3G49620 30.556 288 169 9 48 309 34 316 2.91e-33 127
MS.gene62120.t1 AT5G07480 31.100 209 134 4 152 352 41 247 3.35e-33 124
MS.gene62120.t1 AT3G50210 28.614 332 190 11 46 342 6 325 3.61e-33 126
MS.gene62120.t1 AT3G50210 28.614 332 190 11 46 342 6 325 3.61e-33 126
MS.gene62120.t1 AT3G50210 28.614 332 190 11 46 342 6 325 3.61e-33 126
MS.gene62120.t1 AT1G02400 31.077 325 193 14 42 351 16 324 5.35e-33 125
MS.gene62120.t1 AT5G51810 31.203 266 157 7 23 274 40 293 7.37e-33 124
MS.gene62120.t1 AT1G06640 31.095 283 168 8 10 277 22 292 2.80e-32 123
MS.gene62120.t1 AT1G06640 31.047 277 164 8 10 271 22 286 3.17e-32 122
MS.gene62120.t1 AT1G50960 30.075 266 172 6 40 298 30 288 4.95e-32 123
MS.gene62120.t1 AT5G63595 31.496 254 146 7 44 294 21 249 5.11e-32 121
MS.gene62120.t1 AT5G43440 30.769 273 167 6 10 270 20 282 1.47e-31 120
MS.gene62120.t1 AT1G04380 32.143 252 163 5 23 273 21 265 1.24e-29 115
MS.gene62120.t1 AT2G30840 28.464 267 175 6 13 270 20 279 3.12e-29 115
MS.gene62120.t1 AT3G61400 29.856 278 169 8 10 271 21 288 1.38e-28 112
MS.gene62120.t1 AT3G49630 28.425 292 170 9 48 309 9 291 3.44e-28 112
MS.gene62120.t1 AT5G63580 30.290 241 156 7 34 269 5 238 3.72e-28 110
MS.gene62120.t1 AT5G63580 30.290 241 156 7 34 269 5 238 4.15e-28 110
MS.gene62120.t1 AT5G43450 28.731 268 176 5 10 270 20 279 4.52e-28 111
MS.gene62120.t1 AT3G49630 29.412 289 171 10 43 309 10 287 3.73e-27 109
MS.gene62120.t1 AT3G47190 27.547 265 167 8 48 298 32 285 3.95e-26 107
MS.gene62120.t1 AT1G14130 28.523 298 193 8 48 339 9 292 1.38e-23 99.8
MS.gene62120.t1 AT1G30040 26.778 239 156 8 42 271 25 253 2.42e-23 98.2
MS.gene62120.t1 AT5G58660 25.993 277 171 9 48 298 34 302 9.07e-23 98.2
MS.gene62120.t1 AT3G50210 31.905 210 116 8 148 342 46 243 2.29e-22 95.1
MS.gene62120.t1 AT5G51310 27.974 311 187 14 45 332 2 298 1.14e-21 94.4
MS.gene62120.t1 AT3G46500 25.402 311 203 11 40 331 9 309 5.41e-21 92.8
MS.gene62120.t1 AT4G23340 28.467 274 167 10 39 298 1 259 6.18e-21 92.4
MS.gene62120.t1 AT3G49630 33.721 172 95 6 148 309 56 218 6.77e-21 91.3
MS.gene62120.t1 AT3G46490 26.506 332 188 15 44 333 5 322 1.55e-20 91.3
MS.gene62120.t1 AT3G46500 26.449 276 174 11 40 296 9 274 3.88e-19 87.0
MS.gene62120.t1 AT3G46490 26.861 309 172 15 44 314 5 297 5.13e-19 86.7
MS.gene62120.t1 AT5G58660 25.490 255 155 9 48 277 34 278 6.99e-19 85.9
MS.gene62120.t1 AT1G14120 25.987 304 197 7 48 341 8 293 8.01e-18 83.6
MS.gene62120.t1 AT1G14120 25.987 304 197 7 48 341 8 293 8.01e-18 83.6
MS.gene62120.t1 AT1G14120 25.987 304 197 7 48 341 8 293 8.01e-18 83.6
MS.gene62120.t1 AT1G52820 25.418 299 206 10 47 336 11 301 8.90e-18 83.2
MS.gene62120.t1 AT1G02400 29.150 247 151 12 42 274 16 252 1.09e-17 82.4
MS.gene62120.t1 AT4G22870 41.346 104 56 2 240 342 2 101 6.20e-17 76.3
MS.gene62120.t1 AT2G06960 33.333 147 83 5 192 338 15 146 1.78e-16 76.3
MS.gene62120.t1 AT4G23340 41.667 96 51 3 207 298 47 141 1.01e-15 75.5
MS.gene62120.t1 AT3G46500 26.943 193 123 6 155 335 53 239 1.34e-15 75.9
MS.gene62120.t1 AT3G46500 26.943 193 123 6 155 335 53 239 1.34e-15 75.9
MS.gene62120.t1 AT1G35190 24.749 299 186 9 44 313 5 293 2.07e-15 76.6
MS.gene62120.t1 AT3G46500 28.492 179 110 6 165 331 1 173 2.50e-15 73.9
MS.gene62120.t1 AT4G22870 42.529 87 46 2 240 322 40 126 1.10e-14 71.2
MS.gene62120.t1 AT3G46500 30.380 158 90 7 151 296 51 200 5.06e-14 70.9
MS.gene62120.t1 AT4G16765 28.713 202 123 7 149 335 45 240 6.45e-14 71.2
MS.gene62120.t1 AT4G16765 28.713 202 123 7 149 335 45 240 6.45e-14 71.2
MS.gene62120.t1 AT4G16765 28.713 202 123 7 149 335 45 240 6.45e-14 71.2
MS.gene62120.t1 AT3G46500 30.061 163 93 7 149 296 13 169 1.31e-13 69.3
MS.gene62120.t1 AT3G46500 30.061 163 93 7 149 296 13 169 1.31e-13 69.3
MS.gene62120.t1 AT4G16765 31.515 165 92 7 149 298 45 203 4.59e-13 68.6
MS.gene62120.t1 AT4G03070 31.933 119 79 2 217 334 187 304 7.81e-13 68.9
MS.gene62120.t1 AT4G16765 32.520 123 76 3 218 335 74 194 3.45e-12 65.5
MS.gene62120.t1 AT1G52800 23.385 325 202 12 39 338 1 303 4.26e-12 66.6
MS.gene62120.t1 AT3G46500 30.147 136 78 5 155 278 53 183 4.98e-11 61.6
MS.gene62120.t1 AT3G46480 27.684 177 106 7 161 321 93 263 5.57e-11 63.2

Find 66 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGACGATCGTTGAGTTTA+TGG 0.164144 5.2:+41008488 MS.gene62120:CDS
TTGAACACTGCAGGGCTTTC+AGG 0.166389 5.2:-41009197 None:intergenic
GCATTTGAGAGTGGCTTAAT+AGG 0.272449 5.2:-41008717 None:intergenic
CAAGTATTCCCCAACCATTC+AGG 0.301424 5.2:+41008328 MS.gene62120:CDS
GGAATACTTGGAAACAAGTT+TGG 0.302805 5.2:-41008315 None:intergenic
CAAAGAATGGGGTTTCTTCC+AGG 0.312719 5.2:+40999557 MS.gene62120:CDS
GCTAGATTGAATGCAATTCT+TGG 0.317888 5.2:+41009152 MS.gene62120:CDS
CTGAATGGTTGGGGAATACT+TGG 0.360937 5.2:-41008327 None:intergenic
AAGAAATCTAGCAACTCATT+TGG 0.367512 5.2:-41008531 None:intergenic
AACATATCGTTCTGGAACTT+TGG 0.375956 5.2:-40999409 None:intergenic
TTGAGTCCAATGACTTGTTC+TGG 0.389849 5.2:-41008606 None:intergenic
ATCGTTGAGTTTATGGCAAA+AGG 0.398124 5.2:+41008495 MS.gene62120:CDS
GGCCTTCAATTTCATTGAGT+TGG 0.399735 5.2:-41008665 None:intergenic
CAGAAGAACACAAACTTGAA+TGG 0.417798 5.2:+41008247 MS.gene62120:CDS
CTCCAACTCAATGAAATTGA+AGG 0.418615 5.2:+41008663 MS.gene62120:CDS
CGATCATGCATGCAAAGAAT+GGG 0.419677 5.2:+40999545 MS.gene62120:CDS
AACTTATTCAAATCGATGAT+TGG 0.420121 5.2:-40999486 None:intergenic
AATCTAGCAACTCATTTGGT+TGG 0.424098 5.2:-41008527 None:intergenic
TCAGACATGGTGAAGAATCT+TGG 0.430798 5.2:+40999336 None:intergenic
TATTTCTCACGCAAGCTTGA+AGG 0.436191 5.2:+41009251 MS.gene62120:CDS
TTCATTGAGTTGGAGAAGAA+TGG 0.442956 5.2:-41008655 None:intergenic
TTTGGATTTCTTATATATGT+TGG 0.444271 5.2:-41008297 None:intergenic
TCGATCATGCATGCAAAGAA+TGG 0.447725 5.2:+40999544 MS.gene62120:CDS
CTCAATCCTCATTCTGATGT+TGG 0.460494 5.2:+41008624 MS.gene62120:CDS
TCGTTCTGGAACTTTGGTGA+TGG 0.474377 5.2:-40999403 None:intergenic
CTTTCAGGAGTAACAAGGCT+TGG 0.474827 5.2:-41009182 None:intergenic
CCTGGTGATATGGAGGGGTT+TGG 0.474899 5.2:+41008207 MS.gene62120:CDS
AGTAATTCATCCTCATTGCT+TGG 0.476820 5.2:-41008566 None:intergenic
AGAAGAACACAAACTTGAAT+GGG 0.481222 5.2:+41008248 MS.gene62120:CDS
CCAACTTTATTGAACACTGC+AGG 0.485987 5.2:-41009206 None:intergenic
GGAGTAACAAGGCTTGGTGC+TGG 0.492537 5.2:-41009176 None:intergenic
CCTCAACCAGAACAAGTCAT+TGG 0.498791 5.2:+41008600 MS.gene62120:CDS
GGCCTGCAAGTAAGAAAAGA+TGG 0.507094 5.2:+41008684 MS.gene62120:CDS
ACTTGTTCTGGTTGAGGACA+TGG 0.507834 5.2:-41008594 None:intergenic
CCAATGACTTGTTCTGGTTG+AGG 0.508065 5.2:-41008600 None:intergenic
TCACGGAGTCGATCTATCAT+TGG 0.511176 5.2:+41008110 MS.gene62120:CDS
CGTTCTGGAACTTTGGTGAT+GGG 0.517955 5.2:-40999402 None:intergenic
TGTCTTGAGGATGGAAAACA+AGG 0.541078 5.2:+41009289 MS.gene62120:CDS
CCTGCAGTGTTCAATAAAGT+TGG 0.546978 5.2:+41009206 MS.gene62120:CDS
TTGCTAGATTTCTTTGAAGA+GGG 0.548174 5.2:+41008540 MS.gene62120:CDS
AGCACTGTTAAATGTGGCAA+TGG 0.550490 5.2:-41009132 None:intergenic
CAACTTTATTGAACACTGCA+GGG 0.551137 5.2:-41009205 None:intergenic
TAGATACAACTAGAGAGTCT+TGG 0.553107 5.2:-40999440 None:intergenic
GTTGCTAGATTTCTTTGAAG+AGG 0.558294 5.2:+41008539 MS.gene62120:CDS
TTTACTAGCTCTTGAACAGA+AGG 0.559645 5.2:-40999375 None:intergenic
CCAAACCCCTCCATATCACC+AGG 0.568599 5.2:-41008207 None:intergenic
ACACATTGATGTCTTGAGGA+TGG 0.573486 5.2:+41009280 MS.gene62120:CDS
CAGGGCTTTCAGGAGTAACA+AGG 0.577977 5.2:-41009187 None:intergenic
TATTTCCAGCTGATCAATCA+CGG 0.578873 5.2:+41008093 MS.gene62120:intron
ATCACAAAAGCATTTGAGAG+TGG 0.581692 5.2:-41008726 None:intergenic
AATCACACATTGATGTCTTG+AGG 0.584321 5.2:+41009276 MS.gene62120:CDS
AACAGAAGGCACCGTTAGAG+AGG 0.584674 5.2:-40999361 None:intergenic
CAATCTAGCACTGTTAAATG+TGG 0.587394 5.2:-41009138 None:intergenic
AAGTTGTTATCTGAAGAAGA+TGG 0.630763 5.2:+40999504 MS.gene62120:CDS
GTTTGACAGATAATGACGAA+TGG 0.632619 5.2:+41009053 MS.gene62120:intron
AGAGTTCTTCAATCTATCTG+CGG 0.636691 5.2:+41008158 MS.gene62120:CDS
AGAGCACCAACATCAGAATG+AGG 0.637416 5.2:-41008630 None:intergenic
GAATCTTGGAACCTCTCTAA+CGG 0.641413 5.2:+40999350 MS.gene62120:CDS
GTTCTTCAATCTATCTGCGG+AGG 0.647422 5.2:+41008161 MS.gene62120:CDS
AAGTAAGAAAAGATGGAATG+TGG 0.652097 5.2:+41008691 MS.gene62120:CDS
AGTGTTCAATAAAGTTGGAG+TGG 0.652929 5.2:+41009211 MS.gene62120:CDS
GATCATGCATGCAAAGAATG+GGG 0.659038 5.2:+40999546 MS.gene62120:CDS
AAGAGGGAAGCCAAGCAATG+AGG 0.669106 5.2:+41008556 MS.gene62120:CDS
CAACATTGGAGACATGCTAG+AGG 0.695065 5.2:+41008749 MS.gene62120:CDS
TGTTCTGGTTGAGGACATGG+AGG 0.710542 5.2:-41008591 None:intergenic
GTCTTGAGGATGGAAAACAA+GGG 0.754653 5.2:+41009290 MS.gene62120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.2 gene 40999342 41009316 40999342 ID=MS.gene62120
chr5.2 mRNA 40999342 41009316 40999342 ID=MS.gene62120.t1;Parent=MS.gene62120
chr5.2 exon 40999342 40999578 40999342 ID=MS.gene62120.t1.exon1;Parent=MS.gene62120.t1
chr5.2 CDS 40999342 40999578 40999342 ID=cds.MS.gene62120.t1;Parent=MS.gene62120.t1
chr5.2 exon 41008102 41008349 41008102 ID=MS.gene62120.t1.exon2;Parent=MS.gene62120.t1
chr5.2 CDS 41008102 41008349 41008102 ID=cds.MS.gene62120.t1;Parent=MS.gene62120.t1
chr5.2 exon 41008446 41008770 41008446 ID=MS.gene62120.t1.exon3;Parent=MS.gene62120.t1
chr5.2 CDS 41008446 41008770 41008446 ID=cds.MS.gene62120.t1;Parent=MS.gene62120.t1
chr5.2 exon 41009062 41009316 41009062 ID=MS.gene62120.t1.exon4;Parent=MS.gene62120.t1
chr5.2 CDS 41009062 41009316 41009062 ID=cds.MS.gene62120.t1;Parent=MS.gene62120.t1
Gene Sequence

>MS.gene62120

ATGGTGAAGAATCTTGGAACCTCTCTAACGGTGCCTTCTGTTCAAGAGCTAGTAAAGCAACCCATCACCAAAGTTCCAGAACGATATGTTCAGCAAAACCAAGACTCTCTAGTTGTATCTAGCACAATCTCTTCACAACAAGTACCAATCATCGATTTGAATAAGTTGTTATCTGAAGAAGATGGAACTGAACTACAAAAATTCGATCATGCATGCAAAGAATGGGGTTTCTTCCAGGTTTGAATCACACTTTTCCATTATTGTATTTTAATTTCACTTTGTTCAAAAGAACTGCATGTATATTACAATTGACAAGTCTAATCTCTAAATAAAATGAACCAAATAAAAATCTAAGTAAAATGAAAACACTCCAAAGAAAACAAGTTGTCAAAAGTTTTAGTTGACCATTAAAAAAGAATTATTTCTTCAATAATTCATCAAGGTAAAATCTAAATTACATTATAATGATTGTTTAGTGAGGGTATATTCCTTAAATATTATTTGTAAATCTTTCAATGATGATGTATAAATTTGATACAAACGTTGACTAAGTAAAATAGAAAACAATTTTTTTTTATGAAAAGTACACATAGACAGACAAACCAATTTTCTTCCAAAGAATAAAATTTGGATCAAGTCCGTAAACATTTTTAAAGATAAAGGACTAACTTAACAAGAAAAAATATGAATTATAAGTTTAGAACGTTAAATCAGGCTTAATTGCACGTTTGATTATTTATATTATATTATGTTTTAAGTTGGTCACTTAAGTTTTAAAAGTAGCTTAATTGATCTTTTATCTTTTAAAAGTTTAAAATTGATTCAAAATGTCACTCATGGTTGAATAAGTTAATCCCTTTCATCACATAATATTGGGTTCAATAAAACAAAAATAATTTAAAACTGATTTTTTAAATAAATTAAATTCCAACATCCATATTCTCAACCCAAACCTCTAAACTGTTTGTCAAAAAAAAAAAACCAAACCTCTAAACCGCCAAGTGGCAGAAAATACTAACTTATTCCGATGTGAGTAATGTTTTGTACTAACTTAAAACTTTTAAAACATAAGAGATTAACTTCAAATGTTTAAAACATAAATGACCAACTTAAACTTAAAATAAACATAAGAGATCAGACATGCAATTTGACCTTTAAATTAAGTTAAAATACCACAATTGCAATTTCAAATATTAGTGAATCAAACTTTATCATTTTCTAATATACAAGTCGAGTTTGAGTTATCCATATTTGTATGAGTCCATCTTTTTATTTTTTGAGGGGTTGTACAAGTCTATCTTAATTTTTAGGTATCATAACTTGACTTCTTAGACCACTAGCTTTATCCATGTAATCCCAAAAAGTTAGCCACTGAAATAACCAAAAACATGATACAACACCCAACCACAATGTTTTACCGTATATCTGATAGAGCCAAACCGCAAGTGCACGGCCTATCGAAGTAATAGTAGTAAGAAGAGTATCGTTCCGCTAGGGAGTTGTGAATTCAATTAACTTTTAGAGAATGATTAGAAGAGAAGAAAGATTATGAAATAGGGGGTTAATTGCTAAAGATGAATAACAATAATAATAAAAGAGCCTTGGGATTATTGGTTTATCACAATAACAAACCCTTCACTAGACAAGACTTAAACATCTAATTTCATGGTTTACACCTTAATTTCTAAAGACCGGTTTCCCTTAGCCCCTCACCTTTCCGATGAAAGTCCGGTGAGAGTTTACTTCTAGTAACCAAGCCTATTTCGCTGACTTGATTACTAGAAGATGCATAGAGGATTGAAACTACTCTTTGTCTCAATAATTGCAAAGACTATTTCACTGTTTTGCAATTATTGTCTAGATTCACTTGTTCCAACATCAAAGCTCCGCTCTCGCTTTATGAATTGATGTTTGGGATGATGGATTAACGATTATCAAACCCTCCGCTTTCGCTTCCACAGTTTGATAATTGTTAATCCACGTTAAGACGATGAATCTAGATTAGAAATTAGGGTTACATAGAAATTAGGGTTTAAGCTTGGTTTGTTTAGGATTATGTCATTAGACTTACCAACAATCCCAAGACAAAGAAGTCTACTCACTAACGTTCATTGTAGACATGGGGGAAGAAGAGAGAAATACGGTAAAATAAATTGCAAAGAAAGTAAAAGGAAAAATAAAGACTTTTATTAAAATAGCAATTGAAATAAACAAAGTAAAGCATCCTTGTTTATGGTGGAGAGCTACTCTATTTATAGCTTTACAATTGACTTAGAAACTAAGCAACTAAAAGGATAAAACGGTAAAGCCGCAACAGGGTAACTTGGCCTTGAAGAAAAAGCAGCAAAAGTGGTTTCTGGGACGGGCACGGCCGTGCCACATGTTGGCACGGGCCGTGCCAAGCTTCTGAGTTGGGGGAATATATTTTTACCCCGTATCTTCGTATTCTTGCGCTGTATTTTGCTCCAGTCCTCTTTCTTTTGCTCCAAGGCACCTTCCACCATATATTTATTCCTAAAATAAAATAAAATACAATTTGAAGTAAAATATTCTAATATAAAATAAAATGCAATAAAACTAAATCAAATCTAAAATAAAACTAAACTAAATAAGGCAATAAATTATACTATCTATGACTCATCAAACTCCCCCACACTTGAATCTTTGCTTGTCCTCAAGCAAAAGGCAGCAAACATAGCAGCAACAAAAGATTTGATTATGGCAATATTAAGAGCAAATGTCTCTAGAGAAAGGCTTTGCCTCAAGTACACTAATTACAATTTCAAATACTTCTCATGAACCTATTCTACCCAACATCAAGTCTCAAGTGAGTGTGTGTGTGCAGTCCAACCCTTTTCTTGCTCCTGTATAAGACAGATATTATGAGGAATAGGTTCTATCCTTAGTGCTAAAGTAACCGAGAAAAGTCCTTTCTTCATTTCATATAGGAGTGATGGGAATTTGAGTTAAAAATTAAATTAGATATAACAATTGAGCACAAGGGGCTGCAGATGCTTAGAGGCTATCTATCCTCATAGGAAGTCTTCTCGGATGTAATTGTCCTTTCCCCCTAGATTCAAAATCACCCTAAGCAGTGCTGCAAAATTATTGTTTCATCTCCGCGTAGGAAGTCTTTTTGGATGTAATTGTCCTTTCCCCCTAGCATTAATGGATTTGTTTCACTTTAGGTTCAAATTAGGGAGTCACCACCACAATTAGGAAGTTAGGGATTGTCCTTTCCCCCACATGTTGGTGCCATTCTCCCGCCCCATTTAACATTAACAAATTAAAAAGAATATAACAATTAAGAACAATTTGATTAATTTTCCCACACAAACTTATACTACTTTTACTCTTAAGACTTTAAAGGGTCTAAGTTAACACTAAAGCTAGAACGTGTTCCTTAAAATACCTATTCATACATTTACTCAAGGATTGCAACCGGGTGCTTTTCTCATTGGAGAATTTCACAATAAAACAAGATATGGGTATAGCAAGAACATAAGAAACACAAGAAACTACTTTTATGTACAAGAAGCAACCTTTTAAAGAAGAGACAAAACAAAAAAAAATTCATGCCAATTTTTACATTAAAAACAAGCTACTAGTCATGCCTCTTGCTATAAAAACAAAACAAAAGAATAAAGTTCAAGGGAGTTTGGAACACTACGACTCTAGACACTTTATTAGGCCCCCCCACACTTAGGAGAAGCATTGTCCTCAATGATTCAAAAAGAAAAAGAAATTAAAAGAGAAGAAGAAGAAGGAGTAGAAGAAGAAGAATAGGAGAAGAAGATGAAGAAGAAAAGATAAGGGAAGAGAGGAAGAGGAAAGCTCACAATTGTTCATTGAGGTCCATAGGGAGGACCTTGGAGATGAAGGTGTTGCATCATCCGGCGGAGCATTTCATTATTTTCTTGTGTTAAGCGGTTGCTTCTAAAAATTTGAACATCATTTCGAAGCCCGAAGATTTCAACACCTTGCCTTTGTTGCTCGGTGCTCATCCTCTCAATCTCATTGTGGATCCATGTCCATCTTTGATCTTCATTTAGATTATCGGTGTTATGGCCATGGTGCTCCTCCTCTTGGTGCAAGTTAGCACTGTCTCCTTCATCAAGATTGTTCTCTTCATGTACCTGATTATCATCAACATACAACAAATTTGCTTCCACCTCGATGCTAGTCCGAGATGGGTTAGGAAGTAGTAACAAAATAGACACATGAAGCTTGAGTGAATATTGCATGGGCGGATGATGTTTTATGAAGTTCATTGCAATGAGGGTTTCTATGTTTAGCCTATTGTTTCTCTCAATTGGATTTAGCCCCTCATTTTCACCCACTCAAAATTGCCTAGTTATGTATGTGATGATGCCACCCACTACTATCTCCCCCTTTCCGGCAGGTCTATTACCTACATCGCAAGATAATCAAGCAAGTAGAAACAAGTGTTCATAGCCTAAGTGGAAACAACTCTATGGTTAGGATTATCAAAAGTCAACCTATTTTTAGAAAAAAAAAAACAATTGAACTTAGGAACTCATAGGTGAAATTCTCATACCCTCTCATAGGTTTCAATATCTCAATCCATCCTAAGTTTCCTAGCAACTTATACACATTATCTCTAATGCCTAGCACATTCAAGCTATGAGAATCAGGATATCGACAAGGATGTACAGGTTTAGAAGTTAGAACTTTATACCTATCCCTTTATGTGTTGTCTTTGAATTGGATTCCATGATTCTTTGCCGGTGCTTTCTTCTTTGCTTGAGGTCCTCCGGAAGAGCTTGCTACTTCTTTACCACCTCTTCTTGAAGCCATTAACCTTAGGTTGACTTTGTGTGGTTTGGGTCAAGGTTAGGGTTGGGAAGAATTTTGGTAGGAAAGGTTGGTTTAGGTTTGGGTTTGATGTTCAAGTAAGGGTTATGAGTATAGATATGGAGATTGGTTAAGAATATGTGGTTTTTGGGTTAGGTTTTAGGGAAATAAGGCTTTGGTGAATTATGGGTTTGGGTGGATGAAAGTTGTTTTTGATGGAAGGGTTTTGTGTAGAATGAAGTTAAGAGTTGATTGGGTTAAGGAGTTGATTGATTTGGTGAAGTTTTTAGGGAGATATGAAGGTTTGAAGGTTTCTGGTTATTAAGGATTTAGGGAGAAAAAGTCAGGCACGGCCGTGCAATGCACAAGTGCGGACCGTGCCAAGCACAGGCACTGTTCGTGCCATGCACGGGATTTTTTTTTTTTTTTGGACAGGCACGGCCGTGCCATGCATAGGCACGGGCCGTGCCAAGCTTCTGGAAAAAAAATGGTTTTGGGTAGGTTTGGTTAGCACGGCCGTGCTATGCACGGGCACGGGCCGTGCCATGCACGGGTCAATGACTTCAATTTTTTTCATTTTTTTTTTCGCATCATATTTGGACAAGTACCTACAAAACAAATTAAAACAACACAAAACAAACAAAATAAAAGCAATAAAAGTCATGGGTTGCCTCCCACGAAGCGCTTGTTTAGAGTCACTAGCTTGACGGTTAGAAGGTGGTTTATCTATCCTATACCCAATCTCTCAGAAAGGGATAATGGCAACAAACTAACATGCTCTCCCAAATCACACATGGCTTTCTCAAATGTTTTATATCCTATGACACAAGGTATGGAAAATCTCTCTGGATCCTTAAGTTTAGGTGGCAATTTGTTTGGAAGTATTTCAATAAAATTTCTAAACTGCTCATCTAACTTGGATTTAGCAAACTCTTGTGTTAAAGGAATTTTAGGCTCATGAGATGGTGAAACAAATGGCTTGTCATTCTCTCCTATAGCTTTCTCACTTTGAGGCTTATCACTTCCTATCTCTCGTTCATTGTTCTTAATTTTCACAACGGGGTCCTCTAATTGGTTACCATCCCTAAAAATAATAGCACGTATATGGTCTTTGGGGTTGGTTTCGGTTTGGCTTAGAAGGACTTCGGAGGTTTGAGAGGGAGTAGCCAGCTGTTGGGGTACTTGGGAAGTCTGAGTCTCTATCATCTTACTGTGAGTAACTATGGAGTCTACATTCAATGTATGTTTGGCAAGAGAGTCCTTCAAAAATTCAGTTTGGTTTTTAAACTCTTGGAGCTGCTCAGATTGATTTATAAGAAAATTTTCTAAAAAAAGTTCCAAACTGGATTTTTGAGGGACTATTTGGTTGTTTGCATAACTGAGTGGTGTTGTTTCTTGTCCAAAAAGATTTTGAGGGGTTTGAAAAAAAAATTGGTTATTTTTAAACCCTTGATTATATTGAGCATAGTTTACTTGCTCAGGACTTCTAACAACACTACCTAGTTGGCAATCAATGCCAATATGGCCAAATACACCACAAACTTCACAAAGAGGTGATACAGGGGGAGGTGTGACAGCACTAGTATTTATTTTATCAAATTTTTGTGTGAGTGCGTCAACTTTAGTAGCTAGATGATCAAGGGAAGAATTTTCATACATACCTACCTCTTTCTGAGAGGGTGAAGGAGCAACATTAGTGGTGTCCCTTCCGTAGGTCCACTGATAGTGGTTTTGTGCCATGTCCTCGATCAAAGCATATGCTTCTGTGTATGTTTTGTTCATCAGAGCTCCACCTGCAGCTGCATCAACATAAATTTTTGTGGGATACAAAAGGCCATTATAAAAAGTGTGAATAATAAGCCAATTCTCTAAACCATGATGGGGACAAAGTCTAAGCATTTCTTTGAAACGCTCCCACGCATCGTAAAGAGATTCTCCATCTTTTTGAGTGAATTGTATGATTTGTTTTCTTAAGTGAACAATTTTAGAATGAGGAAAGAATTGGGCAAGAAAAGTTTGCCTCATTTGTTGCCATGAAGTGATAGAACCAAGTTTTAATGAATTAAACCAAGCACTAGCTCTTCCCCCTAAGGAAAAAGGAAAGTAGTGCAGCCTTACGACCTCTTGGTTTGCATTCACGGTTCCACTGAGTCTTAAAAAAGTTGAAATATGAAAATTCGGATCCTCAGTGGTTGATCCGAAAAATTGATTTTGCTGAACTAACTCAATAAGTTCAGGTTCTATTTCAAAATTGTCATCAACCGTTGGGTACACAATAGCATCGTATGACTCATTTGAAGATGGGATTGCATACTCTATGAGAGTGCATTCCTTAGCCATATCGTTATTATCTTCCCAAGAAGTTAAAGGCAAAAGAAGAAATAGAAAAAGATTTTTTTTTTATATATAAAATAAAATAAAATAAAGAGAAAGATTTTTTTTTTATATGAAGTAAATAAAATAAAATAGAATAAAATAAAGATTTTTTTTTTTTTTTTTTATAGAAAGAAATATAGAAACAATAAAATAAAATAAAATAAAACAACGAAAAAGATTTTTTTTTTTTTTTTATAGTCTAATCACTATTAAAAAGTTAATCAAATTTCAACAACTCCCCGACAACGGCGCCAAAAACTTGATAGAGCCAAACCGCAAGTGCACGGCCTATCGAAGTAATAGTAGTAAGAAGAGTATCGTTCCGCTAGGGAGTTGTGAATTCAATTAACTTTTAGAGAATGATTAGAAGAGAAGAAAGATTATGAAATAGGGGGTTAATTGCTAAAGATGAATAACAATAATAATAAAAGAGCCTTGGGATTATTGGTTTATCACAATAACAAACCCTTCACTAGACAAGACTTAAACATCTAATTTCATGGTTTACACCTTAATTTCTAAAGACCGGTTTCCCTTAGCCCCTCACCTTTCCGATGAAAGTCCGGTGAGAGTTTACTTCTAGTAACCAAGCCTATTTCGCTGACTTGATTACTAGAAGATGCATAGAGGATTGAAACTACTCTTTGTCTCAATAATTGCAAAGACTATTTCACTGTTTTGCAATTATTGTCTAGATTCACTTGTTCCAACATCAAAGCTCCGCTCTCGCTTTATGAATTGATGTTTGGGATGATGGATTAACGATTATCAAACCCTCCGCTTTCGCTTCCACAGTTTGATAATTGTTAATCCACGTTAAGACGGTGAATCTAGATTAGAAATTAGGGTTACATAGAAATTAGGGTTTAAGCTTGGTTTGTTTAGGATTATGTCATTAGACTTACCAACAATCCCAAGACAAAGAAGTCTACTCACTAACGTTCATTGTAGACATGGGGGAAGAAGAGAGAAATACGGTAAAATAAATTGCAAAGAAAGTAAAAGGAAAAATAAAGACTTTTATTAAAATAGCAATTGAAATAAACAAAGTAAAGCATCCTTGTTTATGGTGGAGAGCTACTCTATTTATAGCTTTACAATTGACTTAGAAACTAAGCAACTAAAAGGATAAAACGGTAAAGCCGCAACAGGGTAACTTGGCCTTGAAGAAAAAGCAGCAAAAGTGGTTTCTGGGACGGGCACGGCCGTGCCACATGTTGGCACGGGCCGTGCCAAGCTTCTGAGTTGGGGGAATATATTTTTACCCCGTATCTTCGTATTCTTGCGCTGTATTTTGCTCCAGTCCTCTTTCTTTTGCTCCAAGGCACCTTCCACCATATATTTATTCCTAAAATAAAATAAAATACAATTTGAAGTAAAATATTCTAATATAAAATAAAATGCAATAAAACTAAATCAAATCTAAAATAAAACTAAACTAAATAAGGCAATAAATTATACTATCTATGACTCATCAATATCATATCATATCTCTATTCAACGACATAATGTTGCAATTTGGGAGTATAGTAGTCAAGTAAATTAAACCATATATCATATTATTTCCAGCTGATCAATCACGGAGTCGATCTATCATTGGTTGAAAATTTCAAAAAACATGTTCAAGAGTTCTTCAATCTATCTGCGGAGGAGAAGAAATTTTTTGGGCAAAAACCTGGTGATATGGAGGGGTTTGGTCAGATGTTTGTTGTATCAGAAGAACACAAACTTGAATGGGCAGATTTATTCTACATTGTCACTCTTCCAACATATATAAGAAATCCAAACTTGTTTCCAAGTATTCCCCAACCATTCAGGTTTTTTTTTTCCTTCCTTCTATATGTGTTATATGCAAGCACTCTTGAGTTTTTTATTTCTTAAGAAATTTAAACAATTTTTTTTGCCCATTACAGAGATAATCTAGAGATGTATTCTATAGAGATGAAAAAATTGTGTGTGACGATCGTTGAGTTTATGGCAAAAGGATTAAAGATCCAACCAAATGAGTTGCTAGATTTCTTTGAAGAGGGAAGCCAAGCAATGAGGATGAATTACTATCCTCCATGTCCTCAACCAGAACAAGTCATTGGACTCAATCCTCATTCTGATGTTGGTGCTCTTACCATTCTTCTCCAACTCAATGAAATTGAAGGCCTGCAAGTAAGAAAAGATGGAATGTGGATTCCTATTAAGCCACTCTCAAATGCTTTTGTGATCAACATTGGAGACATGCTAGAGGTACCGATTTAAAACCGAGTTTAATTTTCATGCATATCACAATCAATTAATTATATGTGCGGCTTTAGAAATGGTTATGATAAAAGTGAAACGTTTCTAATGACCGGACTTATACGATTGATCAACAATGTAAAACCTTAAATGAATATAACTCTAAAAAGAATAATTAACAAATTCTCTTTTTCAGGTTAGATTTAGTAAGTTGACAACAATTAAAAAAAAATTATATAATTAGAAGACAGATAAATGCAAATATTTTGATTTTAGCAAATATGTTGAATTGTTTGACAGATAATGACGAATGGTATTTATCGAAGTATTGAACATCGAGCAACAATTAACGCAGAAAAAGAGAGGATTTCCATTGCCACATTTAACAGTGCTAGATTGAATGCAATTCTTGGTCCAGCACCAAGCCTTGTTACTCCTGAAAGCCCTGCAGTGTTCAATAAAGTTGGAGTGGAAGATTTCTTTAAAGCATATTTCTCACGCAAGCTTGAAGGAAAATCACACATTGATGTCTTGAGGATGGAAAACAAGGGATAA
Protein sequence

>MS.gene62120.t1

MVKNLGTSLTVPSVQELVKQPITKVPERYVQQNQDSLVVSSTISSQQVPIIDLNKLLSEEDGTELQKFDHACKEWGFFQLINHGVDLSLVENFKKHVQEFFNLSAEEKKFFGQKPGDMEGFGQMFVVSEEHKLEWADLFYIVTLPTYIRNPNLFPSIPQPFRDNLEMYSIEMKKLCVTIVEFMAKGLKIQPNELLDFFEEGSQAMRMNYYPPCPQPEQVIGLNPHSDVGALTILLQLNEIEGLQVRKDGMWIPIKPLSNAFVINIGDMLEIMTNGIYRSIEHRATINAEKERISIATFNSARLNAILGPAPSLVTPESPAVFNKVGVEDFFKAYFSRKLEGKSHIDVLRMENKG