Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64207.t1 | XP_003589458.2 | 96.8 | 751 | 19 | 2 | 3 | 752 | 1 | 747 | 0.00E+00 | 1441 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64207.t1 | Q9M041 | 58.0 | 735 | 257 | 8 | 13 | 747 | 225 | 907 | 8.3e-238 | 824.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64207.t1 | G7I746 | 96.8 | 751 | 19 | 2 | 3 | 752 | 1 | 747 | 0.0e+00 | 1441.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene64207 | 0.847046 | 1.48E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene64207 | 0.801243 | 9.87E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene64207 | 0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene049368 | MS.gene64207 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene64207 | 0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene050657 | MS.gene64207 | 0.819682 | 1.02E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene64207 | 0.807795 | 4.25E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene64207 | 0.810653 | 1.04E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene64207 | 0.808893 | 2.48E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene64207 | 0.855391 | 6.51E-62 | -1.69E-46 |
| MS.gene052037 | MS.gene64207 | 0.803976 | 2.70E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene64207 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene64207 | 0.828443 | 8.97E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene64207 | 0.811792 | 5.86E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene64207 | 0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene64207 | 0.818311 | 2.09E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene64207 | 0.811192 | 7.92E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene64207 | 0.812891 | 3.37E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene64207 | 0.822327 | 2.51E-53 | -1.69E-46 |
| MS.gene054576 | MS.gene64207 | 0.834527 | 2.85E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene64207 | 0.80582 | 1.11E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene64207 | 0.84076 | 7.16E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene64207 | 0.80859 | 2.87E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene64207 | 0.805247 | 1.46E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene64207 | 0.801282 | 9.69E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene64207 | 0.815459 | 9.15E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene64207 | 0.802122 | 6.52E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene64207 | 0.805752 | 1.15E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene64207 | 0.817772 | 2.77E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene64207 | 0.821489 | 3.93E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene64207 | 0.808503 | 3.00E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene64207 | 0.835098 | 2.04E-56 | -1.69E-46 |
| MS.gene056699 | MS.gene64207 | 0.805156 | 1.53E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene64207 | 0.816818 | 4.54E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene64207 | 0.813348 | 2.68E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene64207 | 0.813063 | 3.09E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene64207 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene64207 | 0.819595 | 1.07E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene64207 | 0.82914 | 6.08E-55 | -1.69E-46 |
| MS.gene059965 | MS.gene64207 | 0.820518 | 6.58E-53 | -1.69E-46 |
| MS.gene060373 | MS.gene64207 | 0.804891 | 1.74E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene64207 | 0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene64207 | 0.82007 | 8.33E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene64207 | 0.808876 | 2.50E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene64207 | 0.849105 | 4.00E-60 | -1.69E-46 |
| MS.gene061160 | MS.gene64207 | 0.81301 | 3.18E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64207.t1 | MTR_1g024820 | 96.804 | 751 | 19 | 2 | 3 | 752 | 1 | 747 | 0.0 | 1493 |
| MS.gene64207.t1 | MTR_1g024155 | 74.627 | 134 | 27 | 3 | 237 | 368 | 1 | 129 | 1.26e-57 | 192 |
| MS.gene64207.t1 | MTR_8g092520 | 95.312 | 64 | 3 | 0 | 370 | 433 | 10 | 73 | 1.37e-33 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64207.t1 | AT5G01310 | 58.378 | 740 | 248 | 10 | 13 | 748 | 23 | 706 | 0.0 | 858 |
Find 166 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAAAGCCTTCACTTAATT+TGG | 0.070308 | 1.3:-1244932 | None:intergenic |
| CAACTGCATGGATATCTATT+TGG | 0.167991 | 1.3:-1244786 | None:intergenic |
| CGCAGATGCAAAACCCATTT+TGG | 0.177970 | 1.3:+1243420 | MS.gene64207:intron |
| CATTATACTAGATTGGATTT+TGG | 0.192997 | 1.3:-1245070 | None:intergenic |
| ATACCGAAAGGTGCTCATTT+TGG | 0.219069 | 1.3:-1247211 | None:intergenic |
| CAACATGGGTAAAGAACTTA+TGG | 0.223881 | 1.3:-1245509 | None:intergenic |
| TGCACACAGTGGGTTTAAAA+TGG | 0.240693 | 1.3:+1247243 | MS.gene64207:CDS |
| AGTATTTGTAGAATGATTTC+TGG | 0.242332 | 1.3:-1246778 | None:intergenic |
| ACCAACTAAGATTACCAAAA+TGG | 0.255360 | 1.3:-1243434 | None:intergenic |
| TAATCATTGTTCAGACAATT+TGG | 0.269486 | 1.3:-1246615 | None:intergenic |
| GGTCTTTGTGGATTCATATT+AGG | 0.285029 | 1.3:-1246594 | None:intergenic |
| TATAATGAAATTCCTGAAAA+AGG | 0.291515 | 1.3:+1245086 | MS.gene64207:CDS |
| TGCGTTCCTCTTCTCGCACC+TGG | 0.293905 | 1.3:+1243497 | MS.gene64207:CDS |
| TTTCAGGATGCATAGCTATT+AGG | 0.300282 | 1.3:-1246980 | None:intergenic |
| AACCTTTCACATGGCTGCTT+TGG | 0.309505 | 1.3:+1245030 | MS.gene64207:CDS |
| GCGCATGCTAATTCCAAGTT+AGG | 0.313836 | 1.3:+1245219 | MS.gene64207:CDS |
| CACCCTGACAAAATGTTATT+CGG | 0.326546 | 1.3:-1244954 | None:intergenic |
| TCTCGATCTGTTAAACGATC+TGG | 0.327806 | 1.3:+1244838 | MS.gene64207:CDS |
| TTCAGACAATTTGGTCTTTG+TGG | 0.329030 | 1.3:-1246606 | None:intergenic |
| GACTCTACTTCCCAGACTTC+TGG | 0.329410 | 1.3:+1245153 | MS.gene64207:CDS |
| CTGCCTTGTCATGGTTGAAT+TGG | 0.331343 | 1.3:-1245350 | None:intergenic |
| TTGGTTGCAGACTCCAGTTC+AGG | 0.336397 | 1.3:-1246462 | None:intergenic |
| GGAATTTCATTATACTAGAT+TGG | 0.340534 | 1.3:-1245077 | None:intergenic |
| TTAAAGCCTTCACTTAATTT+GGG | 0.349736 | 1.3:-1244931 | None:intergenic |
| GACTTTAAGCGGGGTATGTT+TGG | 0.350434 | 1.3:-1248170 | None:intergenic |
| AAGGTGGATTTCCCGCTTCC+AGG | 0.350962 | 1.3:-1243460 | None:intergenic |
| CCTACTCGAAAACGGGCGTT+TGG | 0.353806 | 1.3:+1248229 | MS.gene64207:CDS |
| AAATACAAGGGAACCCTTGA+TGG | 0.361121 | 1.3:+1246849 | MS.gene64207:CDS |
| CTATTGCTTTAGGACACTAT+TGG | 0.364954 | 1.3:+1244625 | MS.gene64207:intron |
| ATCACTCGCCTTTATTCAAC+TGG | 0.366524 | 1.3:+1245537 | MS.gene64207:CDS |
| AACTGCATGGATATCTATTT+GGG | 0.366972 | 1.3:-1244785 | None:intergenic |
| TGACGACAAGCTACTGTCTA+TGG | 0.369859 | 1.3:+1248115 | MS.gene64207:CDS |
| CAAAGAAGGCATGGGGATCA+TGG | 0.381280 | 1.3:+1246943 | MS.gene64207:CDS |
| CACCTGGGTTCGCGTTTGTC+AGG | 0.384918 | 1.3:+1243513 | MS.gene64207:CDS |
| TGGAATTAGCATGCGCTGTT+GGG | 0.385424 | 1.3:-1245212 | None:intergenic |
| AAATCTGCTGTTGAAATAGA+TGG | 0.385657 | 1.3:-1245327 | None:intergenic |
| GCAAACCTCCAGTTGAATAA+AGG | 0.388247 | 1.3:-1245545 | None:intergenic |
| TGATTCCCTCTGCAAAGATA+TGG | 0.394356 | 1.3:+1245182 | MS.gene64207:CDS |
| GACATGGGTCACACCTTCTC+TGG | 0.401712 | 1.3:-1246556 | None:intergenic |
| CCTGCTTACCTACTCGAAAA+CGG | 0.410998 | 1.3:+1248221 | MS.gene64207:CDS |
| ATTGATGAGGTATCTATTCA+TGG | 0.413174 | 1.3:+1248074 | MS.gene64207:CDS |
| CTGCTTACCTACTCGAAAAC+GGG | 0.421330 | 1.3:+1248222 | MS.gene64207:CDS |
| CCAACTAAGATTACCAAAAT+GGG | 0.422030 | 1.3:-1243433 | None:intergenic |
| TGATGCCGCAGGTCCTGAAC+TGG | 0.422054 | 1.3:+1246449 | MS.gene64207:CDS |
| TGCCGCTTTGGATTTAACTA+AGG | 0.423436 | 1.3:-1245469 | None:intergenic |
| TAGTGCTGCTAGAGCATTGA+AGG | 0.424756 | 1.3:+1244684 | MS.gene64207:CDS |
| TCTTTAGATGCAGTATCAAC+TGG | 0.427580 | 1.3:-1245117 | None:intergenic |
| CATAAGTTCTTTACCCATGT+TGG | 0.433972 | 1.3:+1245510 | MS.gene64207:CDS |
| CGAGAAATACACAGCTTAGC+AGG | 0.436953 | 1.3:-1244820 | None:intergenic |
| ACTAATATGCGACTTTAAGC+GGG | 0.448216 | 1.3:-1248180 | None:intergenic |
| AAATGTAGTTGTCGCATTGA+AGG | 0.453847 | 1.3:-1247954 | None:intergenic |
| GCTTATGCATCACTATTTGA+AGG | 0.454340 | 1.3:+1246666 | MS.gene64207:CDS |
| TTTATAGATTAGCACTTACT+TGG | 0.457038 | 1.3:-1248264 | None:intergenic |
| TTGGAATTAGCATGCGCTGT+TGG | 0.457695 | 1.3:-1245213 | None:intergenic |
| AGCACCTTTCGGTATTGAAA+AGG | 0.458468 | 1.3:+1247219 | MS.gene64207:CDS |
| TGCCTTCTTTGTGCTCCCAT+CGG | 0.460312 | 1.3:-1246931 | None:intergenic |
| TACGGGTTCTAGAGATGAAA+AGG | 0.465029 | 1.3:+1246887 | MS.gene64207:CDS |
| CTCGATCTGTTAAACGATCT+GGG | 0.465731 | 1.3:+1244839 | MS.gene64207:CDS |
| TCTTGATGATATTCCGACTC+TGG | 0.466974 | 1.3:+1245299 | MS.gene64207:CDS |
| TGTCCAAAATGAGCACCTTT+CGG | 0.469516 | 1.3:+1247208 | MS.gene64207:CDS |
| TGCAGAGTACTCAAATAAGA+TGG | 0.475710 | 1.3:+1245395 | MS.gene64207:CDS |
| AGCAGATATTATTGTTGAGA+AGG | 0.477645 | 1.3:+1245371 | MS.gene64207:CDS |
| CTTGAGTGAGAATTCTTCAC+TGG | 0.479309 | 1.3:+1247277 | MS.gene64207:CDS |
| CAAGTCAACTAGAACAAGTC+TGG | 0.479496 | 1.3:-1245424 | None:intergenic |
| ATGCTCTAGCAGCACTACTT+AGG | 0.487592 | 1.3:-1244678 | None:intergenic |
| CGACTGAAACCTGGCGGTGG+AGG | 0.488427 | 1.3:+1246408 | MS.gene64207:CDS |
| TCTTCACTGGTATTTCGCCT+TGG | 0.488540 | 1.3:+1247290 | MS.gene64207:CDS |
| CTTTAGGACACTATTGGAAA+CGG | 0.488697 | 1.3:+1244631 | MS.gene64207:intron |
| CTCGAAAACGGGCGTTTGGT+TGG | 0.491923 | 1.3:+1248233 | MS.gene64207:CDS |
| TTCGAGTAGGTAAGCAGGAA+AGG | 0.492668 | 1.3:-1248216 | None:intergenic |
| GTAATCTTAGTTGGTGCACC+TGG | 0.497340 | 1.3:+1243442 | MS.gene64207:CDS |
| TCTCCTTTGTTCACCAGAGA+AGG | 0.497892 | 1.3:+1246543 | MS.gene64207:CDS |
| TTAGTTGGTGCACCTGGAAG+CGG | 0.499378 | 1.3:+1243448 | MS.gene64207:CDS |
| AAGAGGCTGCAAGGTTCTCC+AGG | 0.499868 | 1.3:+1246641 | MS.gene64207:CDS |
| AAGTTAGGGTCAAAAGATAT+AGG | 0.501315 | 1.3:+1245234 | MS.gene64207:CDS |
| ACATTTACATGTTATTAGCC+AGG | 0.504468 | 1.3:+1247971 | MS.gene64207:CDS |
| TATGCATCCTGAAAAGCATA+AGG | 0.504572 | 1.3:+1246989 | MS.gene64207:CDS |
| AGTAAGAGAGATGCTGATCA+TGG | 0.505253 | 1.3:+1246810 | MS.gene64207:CDS |
| GCGAGTGATGTCTCCAACAT+GGG | 0.513703 | 1.3:-1245523 | None:intergenic |
| GTGGATTCATATTAGGTCCA+AGG | 0.518443 | 1.3:-1246587 | None:intergenic |
| AAGAGAAACTTGATTGTGAC+AGG | 0.518643 | 1.3:-1245280 | None:intergenic |
| TACTAATATGCGACTTTAAG+CGG | 0.518681 | 1.3:-1248181 | None:intergenic |
| CTGAACAATGATTATGAAAG+AGG | 0.518865 | 1.3:+1246624 | MS.gene64207:CDS |
| TAGTTGGTGCACCTGGAAGC+GGG | 0.522269 | 1.3:+1243449 | MS.gene64207:CDS |
| CTGCTAGAGCATTGAAGGAT+GGG | 0.522735 | 1.3:+1244689 | MS.gene64207:CDS |
| GGAAGAGTGTATTCATTGAC+AGG | 0.523105 | 1.3:+1244710 | MS.gene64207:CDS |
| AAAGAAGGCATGGGGATCAT+GGG | 0.523356 | 1.3:+1246944 | MS.gene64207:CDS |
| GCACACAGTGGGTTTAAAAT+GGG | 0.524257 | 1.3:+1247244 | MS.gene64207:CDS |
| ATTTGCAGGCGACTGAAACC+TGG | 0.527138 | 1.3:+1246399 | MS.gene64207:intron |
| GCAGAGTACTCAAATAAGAT+GGG | 0.527394 | 1.3:+1245396 | MS.gene64207:CDS |
| CGCATGCTAATTCCAAGTTA+GGG | 0.528744 | 1.3:+1245220 | MS.gene64207:CDS |
| GAGAGATGCTGATCATGGAT+TGG | 0.529303 | 1.3:+1246815 | MS.gene64207:CDS |
| GCGTTCCTCTTCTCGCACCT+GGG | 0.532165 | 1.3:+1243498 | MS.gene64207:CDS |
| GGTCAGACTGATAAATCTGC+TGG | 0.534138 | 1.3:+1245255 | MS.gene64207:CDS |
| ATTTGAAGAATAAGAAGCAC+TGG | 0.536704 | 1.3:+1248009 | MS.gene64207:CDS |
| AAAGGAGAAGATGAAGGTAG+AGG | 0.537684 | 1.3:-1246528 | None:intergenic |
| AACCGATGGGAGCACAAAGA+AGG | 0.540085 | 1.3:+1246929 | MS.gene64207:CDS |
| AACATGGGTAAAGAACTTAT+GGG | 0.543818 | 1.3:-1245508 | None:intergenic |
| ACCCATGTCATACATGTCCT+TGG | 0.547057 | 1.3:+1246570 | MS.gene64207:CDS |
| ATGGGAGCACAAAGAAGGCA+TGG | 0.547623 | 1.3:+1246934 | MS.gene64207:CDS |
| GCATCTAAAGAAAATACCAT+TGG | 0.549466 | 1.3:+1245129 | MS.gene64207:CDS |
| TTCGAACATGGACATGGACA+TGG | 0.549674 | 1.3:+1243268 | None:intergenic |
| TCGAGTAGGTAAGCAGGAAA+GGG | 0.550559 | 1.3:-1248215 | None:intergenic |
| ACTATTGGAAACGGTAAAGC+AGG | 0.551394 | 1.3:+1244640 | MS.gene64207:CDS |
| GTACATCAAAATGAAAACCT+TGG | 0.551599 | 1.3:+1246714 | MS.gene64207:CDS |
| GTTAAACGATCTGGGCATGA+AGG | 0.553439 | 1.3:+1244847 | MS.gene64207:CDS |
| TTCATCTCTAGAACCCGTAA+AGG | 0.555487 | 1.3:-1246883 | None:intergenic |
| TGGGAGCACAAAGAAGGCAT+GGG | 0.556101 | 1.3:+1246935 | MS.gene64207:CDS |
| GCATTGACACCTCCACCGCC+AGG | 0.557019 | 1.3:-1246417 | None:intergenic |
| AGGTCGTGTCAAAACCATCA+AGG | 0.558441 | 1.3:-1246863 | None:intergenic |
| TCATTGCAAATGCTGCGAAC+TGG | 0.559496 | 1.3:+1245577 | MS.gene64207:CDS |
| GGAAACCTTTGTTGTTGTCG+AGG | 0.561531 | 1.3:-1243292 | None:intergenic |
| ATAGTGATGCATAAGCATCC+TGG | 0.561975 | 1.3:-1246659 | None:intergenic |
| TCAGAGCATAAAAGAACCGA+TGG | 0.563322 | 1.3:+1246915 | MS.gene64207:CDS |
| CATAACCTCTTCACAGAAGG+TGG | 0.564702 | 1.3:-1243476 | None:intergenic |
| GCGAACCCAGGTGCGAGAAG+AGG | 0.566181 | 1.3:-1243503 | None:intergenic |
| CTCGTATTCGAACATGGACA+TGG | 0.566252 | 1.3:+1243262 | None:intergenic |
| AGCTACTGTCTATGGAGTTG+AGG | 0.566802 | 1.3:+1248123 | MS.gene64207:CDS |
| TTTGTCCATATCTTTGCAGA+GGG | 0.569456 | 1.3:-1245187 | None:intergenic |
| GCTGCTAGAGCATTGAAGGA+TGG | 0.570427 | 1.3:+1244688 | MS.gene64207:CDS |
| AAAGCAAAGACTCTTTCACC+TGG | 0.571665 | 1.3:+1246489 | MS.gene64207:CDS |
| GGCGAGTGATGTCTCCAACA+TGG | 0.576042 | 1.3:-1245524 | None:intergenic |
| AAGGAGAAGATGAAGGTAGA+GGG | 0.576283 | 1.3:-1246527 | None:intergenic |
| TAATATCTGCTGCCTTGTCA+TGG | 0.588066 | 1.3:-1245359 | None:intergenic |
| GGGACAACAACAGCATTCCC+AGG | 0.588798 | 1.3:-1246507 | None:intergenic |
| GTCCAAGGACATGTATGACA+TGG | 0.597354 | 1.3:-1246572 | None:intergenic |
| AACCTGACAAACGCGAACCC+AGG | 0.598184 | 1.3:-1243515 | None:intergenic |
| GACCAAAGCAGCCATGTGAA+AGG | 0.599956 | 1.3:-1245032 | None:intergenic |
| TGACTTGCTTGAAATTTCAG+AGG | 0.600463 | 1.3:+1247013 | MS.gene64207:CDS |
| GTGAACAAAGGAGAAGATGA+AGG | 0.601999 | 1.3:-1246534 | None:intergenic |
| TGCATCAATTGTTAGGAACA+CGG | 0.604743 | 1.3:+1246692 | MS.gene64207:CDS |
| TGATTATGAAAGAGGCTGCA+AGG | 0.604953 | 1.3:+1246632 | MS.gene64207:CDS |
| ACTCGCCTTTATTCAACTGG+AGG | 0.605047 | 1.3:+1245540 | MS.gene64207:CDS |
| CTCAGTAGATATAATTGATG+AGG | 0.605508 | 1.3:+1248061 | MS.gene64207:CDS |
| AGGCGACTGAAACCTGGCGG+TGG | 0.612279 | 1.3:+1246405 | MS.gene64207:intron |
| GGTCGTGTCAAAACCATCAA+GGG | 0.613737 | 1.3:-1246862 | None:intergenic |
| ATTTCGCCTTGGATATCACT+CGG | 0.615306 | 1.3:+1247301 | MS.gene64207:CDS |
| GAGTTGCCCAAATTAAGTGA+AGG | 0.616122 | 1.3:+1244925 | MS.gene64207:CDS |
| ATAGATGGAAATGCCAGAGT+CGG | 0.616187 | 1.3:-1245312 | None:intergenic |
| TTGGTGTTGGCACGGAGTGG+AGG | 0.616958 | 1.3:+1247167 | MS.gene64207:CDS |
| ACGCATAACCTCTTCACAGA+AGG | 0.623531 | 1.3:-1243479 | None:intergenic |
| GAAGGTCAAGTACAACTGCA+TGG | 0.626377 | 1.3:-1244798 | None:intergenic |
| AAATACACAGCTTAGCAGGA+AGG | 0.627877 | 1.3:-1244816 | None:intergenic |
| CCACTGGAGAACCTTTCACA+TGG | 0.631497 | 1.3:+1245021 | MS.gene64207:CDS |
| TTGAAAAGGATGCACACAGT+GGG | 0.633054 | 1.3:+1247233 | MS.gene64207:CDS |
| ACACCTTCTCTGGTGAACAA+AGG | 0.638418 | 1.3:-1246546 | None:intergenic |
| GGGCATGAAGGAAATTTGCA+AGG | 0.641797 | 1.3:+1244859 | MS.gene64207:CDS |
| CTGGGAAGTAGAGTCTCCAA+TGG | 0.644193 | 1.3:-1245145 | None:intergenic |
| GTCCTTAGTTAAATCCAAAG+CGG | 0.648704 | 1.3:+1245467 | MS.gene64207:CDS |
| GAAATCCACCTTCTGTGAAG+AGG | 0.649778 | 1.3:+1243471 | MS.gene64207:CDS |
| CAGAGTACTCAAATAAGATG+GGG | 0.650521 | 1.3:+1245397 | MS.gene64207:CDS |
| AAGCAAAGACTCTTTCACCT+GGG | 0.653354 | 1.3:+1246490 | MS.gene64207:CDS |
| TCCAAGGACATGTATGACAT+GGG | 0.655879 | 1.3:-1246571 | None:intergenic |
| ATTGAATGATATGTATCCTA+AGG | 0.657093 | 1.3:+1247046 | MS.gene64207:CDS |
| AGACTCCAGTTCAGGACCTG+CGG | 0.667051 | 1.3:-1246454 | None:intergenic |
| TTTCCAATTCAACCATGACA+AGG | 0.670098 | 1.3:+1245347 | MS.gene64207:CDS |
| ATGGACCTCGACAACAACAA+AGG | 0.670502 | 1.3:+1243287 | MS.gene64207:CDS |
| GGGAGCACAAAGAAGGCATG+GGG | 0.672205 | 1.3:+1246936 | MS.gene64207:CDS |
| CAGAGCATAAAAGAACCGAT+GGG | 0.673943 | 1.3:+1246916 | MS.gene64207:CDS |
| CCATGTGAAAGGTTCTCCAG+TGG | 0.675910 | 1.3:-1245021 | None:intergenic |
| CTAATATGCGACTTTAAGCG+GGG | 0.687766 | 1.3:-1248179 | None:intergenic |
| TGCATACCGAGTGATATCCA+AGG | 0.698263 | 1.3:-1247307 | None:intergenic |
| TGCAGGCGACTGAAACCTGG+CGG | 0.712644 | 1.3:+1246402 | MS.gene64207:intron |
| CATGAAGGAAATTTGCAAGG+TGG | 0.718134 | 1.3:+1244862 | MS.gene64207:CDS |
| ATTGAAAAGGATGCACACAG+TGG | 0.722541 | 1.3:+1247232 | MS.gene64207:CDS |
| GCAATCTTAATAGAGAACAG+CGG | 0.774151 | 1.3:+1244734 | MS.gene64207:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACAAAAACATAATAGAA+TGG | - | chr1.3:1243819-1243838 | None:intergenic | 15.0% |
| !! | TACATATATGTTAAAATTTC+TGG | + | chr1.3:1247909-1247928 | MS.gene64207:intron | 15.0% |
| !!! | AAGAAATAAGCTATTTTAAA+AGG | + | chr1.3:1247556-1247575 | MS.gene64207:intron | 15.0% |
| !!! | ATAGTTTTCAACTTAATTAA+TGG | - | chr1.3:1243630-1243649 | None:intergenic | 15.0% |
| !! | ATATAATGTACACAAAAAAG+AGG | - | chr1.3:1247890-1247909 | None:intergenic | 20.0% |
| !! | ATTGATACATATCAAAAACT+TGG | + | chr1.3:1244997-1245016 | MS.gene64207:CDS | 20.0% |
| !! | TATAATGAAATTCCTGAAAA+AGG | + | chr1.3:1245086-1245105 | MS.gene64207:CDS | 20.0% |
| !! | TATAATGTACACAAAAAAGA+GGG | - | chr1.3:1247889-1247908 | None:intergenic | 20.0% |
| !! | TTCTGAATCTTTACTAATAT+TGG | + | chr1.3:1244589-1244608 | MS.gene64207:intron | 20.0% |
| !! | TTGATACATATCAAAAACTT+GGG | + | chr1.3:1244998-1245017 | MS.gene64207:CDS | 20.0% |
| !!! | AAGATCTATTTTTTTTCACT+TGG | + | chr1.3:1247341-1247360 | MS.gene64207:intron | 20.0% |
| !!! | ATTATTTGCTCACTTTTTTT+CGG | + | chr1.3:1247620-1247639 | MS.gene64207:intron | 20.0% |
| !!! | GCTAACTTAAATTTGTTTTA+CGG | - | chr1.3:1247401-1247420 | None:intergenic | 20.0% |
| !!! | GGATATATATTTGAAATTTG+TGG | + | chr1.3:1247533-1247552 | MS.gene64207:intron | 20.0% |
| !!! | TCTGTAAACTAAAATTTTCA+TGG | + | chr1.3:1247845-1247864 | MS.gene64207:intron | 20.0% |
| !!! | TTTTTGCCTTTTCTTTTTAA+TGG | + | chr1.3:1243594-1243613 | MS.gene64207:intron | 20.0% |
| ! | AAAAAAGATGAATTCACCTT+AGG | - | chr1.3:1247065-1247084 | None:intergenic | 25.0% |
| ! | AATAAAACTCACAAAAACTG+AGG | - | chr1.3:1244495-1244514 | None:intergenic | 25.0% |
| ! | AATTAAGTGATAATTCAGCA+TGG | + | chr1.3:1247498-1247517 | MS.gene64207:intron | 25.0% |
| ! | AGGGAATTCAAAAATTGTAT+TGG | - | chr1.3:1245971-1245990 | None:intergenic | 25.0% |
| ! | AGTATTTGTAGAATGATTTC+TGG | - | chr1.3:1246781-1246800 | None:intergenic | 25.0% |
| ! | ATTGAATGATATGTATCCTA+AGG | + | chr1.3:1247046-1247065 | MS.gene64207:CDS | 25.0% |
| ! | CAGTTACCATTAAAAAGAAA+AGG | - | chr1.3:1243603-1243622 | None:intergenic | 25.0% |
| ! | GAAAAAAGCAAGAAATACAA+GGG | + | chr1.3:1246837-1246856 | MS.gene64207:CDS | 25.0% |
| ! | GAATTCAAAAATTGTATTGG+AGG | - | chr1.3:1245968-1245987 | None:intergenic | 25.0% |
| ! | GGAATTTCATTATACTAGAT+TGG | - | chr1.3:1245080-1245099 | None:intergenic | 25.0% |
| ! | GTATGAAAATATTCAAGATC+AGG | - | chr1.3:1244010-1244029 | None:intergenic | 25.0% |
| ! | TAAAGTAGTGTTTAATAGAC+AGG | - | chr1.3:1244185-1244204 | None:intergenic | 25.0% |
| ! | TAATCATTGTTCAGACAATT+TGG | - | chr1.3:1246618-1246637 | None:intergenic | 25.0% |
| ! | TACTTTCTTTCTATTGCTTT+AGG | + | chr1.3:1244615-1244634 | MS.gene64207:intron | 25.0% |
| ! | TGAAATGAAAAAACATTTGC+AGG | + | chr1.3:1246385-1246404 | MS.gene64207:intron | 25.0% |
| ! | TGGAAAAAATAGAGAACTTT+GGG | - | chr1.3:1246044-1246063 | None:intergenic | 25.0% |
| ! | TTAAAGCCTTCACTTAATTT+GGG | - | chr1.3:1244934-1244953 | None:intergenic | 25.0% |
| ! | TTTGGAAGTTTGTATTATGA+GGG | + | chr1.3:1244434-1244453 | MS.gene64207:intron | 25.0% |
| !! | AAACAAATTTAAGTTAGCTG+CGG | + | chr1.3:1247403-1247422 | MS.gene64207:intron | 25.0% |
| !! | CATTATACTAGATTGGATTT+TGG | - | chr1.3:1245073-1245092 | None:intergenic | 25.0% |
| !! | GGATTTTTCTAATGTATACA+AGG | + | chr1.3:1247577-1247596 | MS.gene64207:intron | 25.0% |
| !! | TTTTCAACCTCAATTCAATT+TGG | - | chr1.3:1247429-1247448 | None:intergenic | 25.0% |
| !!! | AGGTTGAAAATGATTTTTTG+TGG | + | chr1.3:1247439-1247458 | MS.gene64207:intron | 25.0% |
| !!! | CAGTTTTTGTGAGTTTTATT+AGG | + | chr1.3:1244495-1244514 | MS.gene64207:intron | 25.0% |
| AAACCTTGGAAAAAAGTCTT+TGG | + | chr1.3:1246728-1246747 | MS.gene64207:CDS | 30.0% | |
| AAATCTGCTGTTGAAATAGA+TGG | - | chr1.3:1245330-1245349 | None:intergenic | 30.0% | |
| AACATGGGTAAAGAACTTAT+GGG | - | chr1.3:1245511-1245530 | None:intergenic | 30.0% | |
| AACTGCATGGATATCTATTT+GGG | - | chr1.3:1244788-1244807 | None:intergenic | 30.0% | |
| AAGTTAGGGTCAAAAGATAT+AGG | + | chr1.3:1245234-1245253 | MS.gene64207:CDS | 30.0% | |
| AATTATCTGTTTGCATGTGT+TGG | + | chr1.3:1247648-1247667 | MS.gene64207:intron | 30.0% | |
| ACATTTACATGTTATTAGCC+AGG | + | chr1.3:1247971-1247990 | MS.gene64207:CDS | 30.0% | |
| ACCAACTAAGATTACCAAAA+TGG | - | chr1.3:1243437-1243456 | None:intergenic | 30.0% | |
| AGCAGATATTATTGTTGAGA+AGG | + | chr1.3:1245371-1245390 | MS.gene64207:CDS | 30.0% | |
| ATCACATACGAAAAAGTGAT+AGG | - | chr1.3:1246210-1246229 | None:intergenic | 30.0% | |
| ATGAGAATGAGAATGAATCA+TGG | + | chr1.3:1243358-1243377 | MS.gene64207:intron | 30.0% | |
| ATTTAAAGAGTCAAGCATGT+CGG | - | chr1.3:1247101-1247120 | None:intergenic | 30.0% | |
| CATAATTTCTCCTCATTTCA+GGG | - | chr1.3:1245990-1246009 | None:intergenic | 30.0% | |
| CCAACTAAGATTACCAAAAT+GGG | - | chr1.3:1243436-1243455 | None:intergenic | 30.0% | |
| CCAAGAGATTATTATAGTTG+CGG | - | chr1.3:1244526-1244545 | None:intergenic | 30.0% | |
| CTCAGTAGATATAATTGATG+AGG | + | chr1.3:1248061-1248080 | MS.gene64207:CDS | 30.0% | |
| CTGAACAATGATTATGAAAG+AGG | + | chr1.3:1246624-1246643 | MS.gene64207:CDS | 30.0% | |
| GAAGATCCTATGCAATTTAT+GGG | + | chr1.3:1244043-1244062 | MS.gene64207:intron | 30.0% | |
| GCATCTAAAGAAAATACCAT+TGG | + | chr1.3:1245129-1245148 | MS.gene64207:CDS | 30.0% | |
| GGAAAAAAGCAAGAAATACA+AGG | + | chr1.3:1246836-1246855 | MS.gene64207:CDS | 30.0% | |
| GTACATCAAAATGAAAACCT+TGG | + | chr1.3:1246714-1246733 | MS.gene64207:CDS | 30.0% | |
| GTGGAAAAAATAGAGAACTT+TGG | - | chr1.3:1246045-1246064 | None:intergenic | 30.0% | |
| GTTAAAGCCTTCACTTAATT+TGG | - | chr1.3:1244935-1244954 | None:intergenic | 30.0% | |
| GTTTGGAAGTTTGTATTATG+AGG | + | chr1.3:1244433-1244452 | MS.gene64207:intron | 30.0% | |
| TACTAATATGCGACTTTAAG+CGG | - | chr1.3:1248184-1248203 | None:intergenic | 30.0% | |
| TCAAAAATTGTATTGGAGGA+GGG | - | chr1.3:1245964-1245983 | None:intergenic | 30.0% | |
| TCATAATTTCTCCTCATTTC+AGG | - | chr1.3:1245991-1246010 | None:intergenic | 30.0% | |
| TGAAAACATATTCTATCCCT+GGG | - | chr1.3:1246298-1246317 | None:intergenic | 30.0% | |
| TTCAAAAATTGTATTGGAGG+AGG | - | chr1.3:1245965-1245984 | None:intergenic | 30.0% | |
| ! | AACCGAATAACATTTTGTCA+GGG | + | chr1.3:1244952-1244971 | MS.gene64207:CDS | 30.0% |
| ! | AAGGTTTTGCATCAATTGTT+AGG | + | chr1.3:1246685-1246704 | MS.gene64207:CDS | 30.0% |
| ! | ACGATCGAGTTATTTCATAT+TGG | - | chr1.3:1247679-1247698 | None:intergenic | 30.0% |
| ! | ATTGATGAGGTATCTATTCA+TGG | + | chr1.3:1248074-1248093 | MS.gene64207:CDS | 30.0% |
| ! | ATTTGAAGAATAAGAAGCAC+TGG | + | chr1.3:1248009-1248028 | MS.gene64207:CDS | 30.0% |
| ! | CATTTTATCGAACAGGTAAA+AGG | - | chr1.3:1243552-1243571 | None:intergenic | 30.0% |
| ! | TAACCGAATAACATTTTGTC+AGG | + | chr1.3:1244951-1244970 | MS.gene64207:CDS | 30.0% |
| ! | TATATCTTTTGACCCTAACT+TGG | - | chr1.3:1245235-1245254 | None:intergenic | 30.0% |
| ! | TATGATATGCTGTGTGTTTT+AGG | + | chr1.3:1245725-1245744 | MS.gene64207:intron | 30.0% |
| ! | TTAATCTGTGTTGTTCTCTT+TGG | + | chr1.3:1243742-1243761 | MS.gene64207:intron | 30.0% |
| ! | TTTTCATACTCGCCTATATT+TGG | + | chr1.3:1244021-1244040 | MS.gene64207:intron | 30.0% |
| ! | TTTTTGAATTCCCTGAAATG+AGG | + | chr1.3:1245977-1245996 | MS.gene64207:intron | 30.0% |
| !!! | AAGAGTCTTTGCTTTTTCTT+TGG | - | chr1.3:1246484-1246503 | None:intergenic | 30.0% |
| !!! | AATCATTTTTTCCAGAAGTC+TGG | - | chr1.3:1245167-1245186 | None:intergenic | 30.0% |
| !!! | ACAAAAACATGTTTTGGTGT+TGG | + | chr1.3:1247154-1247173 | MS.gene64207:CDS | 30.0% |
| !!! | ATCATTTTTTCCAGAAGTCT+GGG | - | chr1.3:1245166-1245185 | None:intergenic | 30.0% |
| !!! | CTTTGGTTTCACTTTTTCAT+TGG | + | chr1.3:1243759-1243778 | MS.gene64207:intron | 30.0% |
| !!! | GAAAATGATTTTTTGTGGCT+GGG | + | chr1.3:1247444-1247463 | MS.gene64207:intron | 30.0% |
| !!! | GGTCAGATTTTTTAAAGCTT+CGG | + | chr1.3:1244755-1244774 | MS.gene64207:CDS | 30.0% |
| !!! | GTCAGATTTTTTAAAGCTTC+GGG | + | chr1.3:1244756-1244775 | MS.gene64207:CDS | 30.0% |
| !!! | TAAACCTGTCATTTTTCACA+TGG | + | chr1.3:1246353-1246372 | MS.gene64207:intron | 30.0% |
| !!! | TAGTTTTAACTCATTTCCCA+GGG | + | chr1.3:1246279-1246298 | MS.gene64207:intron | 30.0% |
| !!! | TCAGATTTTTTAAAGCTTCG+GGG | + | chr1.3:1244757-1244776 | MS.gene64207:CDS | 30.0% |
| !!! | TGAAAATGATTTTTTGTGGC+TGG | + | chr1.3:1247443-1247462 | MS.gene64207:intron | 30.0% |
| !!! | TGTTTTTGGATTGAGGATAA+GGG | + | chr1.3:1244363-1244382 | MS.gene64207:intron | 30.0% |
| !!! | TTAGTTTTAACTCATTTCCC+AGG | + | chr1.3:1246278-1246297 | MS.gene64207:intron | 30.0% |
| AAATGTAGTTGTCGCATTGA+AGG | - | chr1.3:1247957-1247976 | None:intergenic | 35.0% | |
| AAGAGAAACTTGATTGTGAC+AGG | - | chr1.3:1245283-1245302 | None:intergenic | 35.0% | |
| ACAGATAACACCTAAAAGCA+TGG | - | chr1.3:1247830-1247849 | None:intergenic | 35.0% | |
| ACTAATATGCGACTTTAAGC+GGG | - | chr1.3:1248183-1248202 | None:intergenic | 35.0% | |
| AGAACACCCATAAATTGCAT+AGG | - | chr1.3:1244052-1244071 | None:intergenic | 35.0% | |
| AGAATGAGGAAGGTTATAGA+AGG | - | chr1.3:1243316-1243335 | None:intergenic | 35.0% | |
| ATAATGATCCTTAGTGTGCA+AGG | - | chr1.3:1247605-1247624 | None:intergenic | 35.0% | |
| CAACATGGGTAAAGAACTTA+TGG | - | chr1.3:1245512-1245531 | None:intergenic | 35.0% | |
| CAACTGCATGGATATCTATT+TGG | - | chr1.3:1244789-1244808 | None:intergenic | 35.0% | |
| CAATAAGCAAGCTTAAGCAT+TGG | - | chr1.3:1246246-1246265 | None:intergenic | 35.0% | |
| CACCCTGACAAAATGTTATT+CGG | - | chr1.3:1244957-1244976 | None:intergenic | 35.0% | |
| CATAAGTTCTTTACCCATGT+TGG | + | chr1.3:1245510-1245529 | MS.gene64207:CDS | 35.0% | |
| CCGCAACTATAATAATCTCT+TGG | + | chr1.3:1244523-1244542 | MS.gene64207:intron | 35.0% | |
| CTAACTATCTACTTCAGCAT+TGG | - | chr1.3:1245648-1245667 | None:intergenic | 35.0% | |
| CTGAAAACATATTCTATCCC+TGG | - | chr1.3:1246299-1246318 | None:intergenic | 35.0% | |
| GAAATTCCTGAAAAAGGTAG+AGG | + | chr1.3:1245092-1245111 | MS.gene64207:CDS | 35.0% | |
| GAAGTTTGTATTATGAGGGA+AGG | + | chr1.3:1244438-1244457 | MS.gene64207:intron | 35.0% | |
| GAATATAGAGAGAGAGAATG+AGG | - | chr1.3:1243330-1243349 | None:intergenic | 35.0% | |
| GCAATCTTAATAGAGAACAG+CGG | + | chr1.3:1244734-1244753 | MS.gene64207:CDS | 35.0% | |
| GCATAGGATCTTCCAAATAT+AGG | - | chr1.3:1244036-1244055 | None:intergenic | 35.0% | |
| GCTTATGCATCACTATTTGA+AGG | + | chr1.3:1246666-1246685 | MS.gene64207:CDS | 35.0% | |
| GGAAGATCCTATGCAATTTA+TGG | + | chr1.3:1244042-1244061 | MS.gene64207:intron | 35.0% | |
| GGTCTTTGTGGATTCATATT+AGG | - | chr1.3:1246597-1246616 | None:intergenic | 35.0% | |
| GTACTATTGTTATGCTGAGA+AGG | + | chr1.3:1247697-1247716 | MS.gene64207:intron | 35.0% | |
| GTCCTTAGTTAAATCCAAAG+CGG | + | chr1.3:1245467-1245486 | MS.gene64207:CDS | 35.0% | |
| TCAGCATGGAAACAGTTAAA+AGG | + | chr1.3:1247512-1247531 | MS.gene64207:intron | 35.0% | |
| TCTACAAGTAGCTTAAGTCA+TGG | + | chr1.3:1247724-1247743 | MS.gene64207:intron | 35.0% | |
| TCTTTAGATGCAGTATCAAC+TGG | - | chr1.3:1245120-1245139 | None:intergenic | 35.0% | |
| TGCATCAATTGTTAGGAACA+CGG | + | chr1.3:1246692-1246711 | MS.gene64207:CDS | 35.0% | |
| TGCGATCAAATTCTAGACTA+AGG | + | chr1.3:1246184-1246203 | MS.gene64207:intron | 35.0% | |
| TTAACAGAAACCTCCTATTG+TGG | - | chr1.3:1246152-1246171 | None:intergenic | 35.0% | |
| TTTCAGGATGCATAGCTATT+AGG | - | chr1.3:1246983-1247002 | None:intergenic | 35.0% | |
| TTTCCAATTCAACCATGACA+AGG | + | chr1.3:1245347-1245366 | MS.gene64207:CDS | 35.0% | |
| TTTGGGTGGTAGGAAATATA+GGG | + | chr1.3:1245781-1245800 | MS.gene64207:intron | 35.0% | |
| TTTGTCCATATCTTTGCAGA+GGG | - | chr1.3:1245190-1245209 | None:intergenic | 35.0% | |
| ! | AAAATAGAGAACTTTGGGAG+AGG | - | chr1.3:1246039-1246058 | None:intergenic | 35.0% |
| ! | AAGTCATCCTTATGCTTTTC+AGG | - | chr1.3:1246999-1247018 | None:intergenic | 35.0% |
| ! | ATTTTTATGGGCATGCTTCT+AGG | + | chr1.3:1247761-1247780 | MS.gene64207:intron | 35.0% |
| ! | CAGAGTACTCAAATAAGATG+GGG | + | chr1.3:1245397-1245416 | MS.gene64207:CDS | 35.0% |
| ! | GATGTGCACTTTTACATTTG+TGG | - | chr1.3:1248151-1248170 | None:intergenic | 35.0% |
| ! | GCAGAGTACTCAAATAAGAT+GGG | + | chr1.3:1245396-1245415 | MS.gene64207:CDS | 35.0% |
| ! | TAAGGTTTGGTTGTTGTTGT+TGG | + | chr1.3:1247804-1247823 | MS.gene64207:intron | 35.0% |
| ! | TATGCATCCTGAAAAGCATA+AGG | + | chr1.3:1246989-1247008 | MS.gene64207:CDS | 35.0% |
| ! | TGCAGAGTACTCAAATAAGA+TGG | + | chr1.3:1245395-1245414 | MS.gene64207:CDS | 35.0% |
| ! | TTCAGACAATTTGGTCTTTG+TGG | - | chr1.3:1246609-1246628 | None:intergenic | 35.0% |
| ! | TTTTGTCCATATCTTTGCAG+AGG | - | chr1.3:1245191-1245210 | None:intergenic | 35.0% |
| !! | AATGTTTTGAGTCAAAGTCC+TGG | - | chr1.3:1247992-1248011 | None:intergenic | 35.0% |
| !! | CCCATTTTGGTAATCTTAGT+TGG | + | chr1.3:1243433-1243452 | MS.gene64207:CDS | 35.0% |
| !! | CTATTGCTTTAGGACACTAT+TGG | + | chr1.3:1244625-1244644 | MS.gene64207:intron | 35.0% |
| !! | CTTTAGGACACTATTGGAAA+CGG | + | chr1.3:1244631-1244650 | MS.gene64207:intron | 35.0% |
| !! | GAGGGTTTTTGAAAAAAGGA+AGG | - | chr1.3:1246073-1246092 | None:intergenic | 35.0% |
| !! | TCATTTTTCACATGGTCTCT+TGG | + | chr1.3:1246361-1246380 | MS.gene64207:intron | 35.0% |
| !! | TGACTTGCTTGAAATTTCAG+AGG | + | chr1.3:1247013-1247032 | MS.gene64207:CDS | 35.0% |
| !! | TTTTGGGTGGTAGGAAATAT+AGG | + | chr1.3:1245780-1245799 | MS.gene64207:intron | 35.0% |
| !!! | ACTCCAAAGACTTTTTTCCA+AGG | - | chr1.3:1246734-1246753 | None:intergenic | 35.0% |
| !!! | CTAGATTGGATTTTGGAATC+TGG | - | chr1.3:1245066-1245085 | None:intergenic | 35.0% |
| !!! | GTGTGTTTTAGGCTTTGTTT+GGG | + | chr1.3:1245736-1245755 | MS.gene64207:intron | 35.0% |
| !!! | GTGTTTTTGGATTGAGGATA+AGG | + | chr1.3:1244362-1244381 | MS.gene64207:intron | 35.0% |
| !!! | TGTGTGTTTTAGGCTTTGTT+TGG | + | chr1.3:1245735-1245754 | MS.gene64207:intron | 35.0% |
| !!! | TTCTAGGTGTTTTTGGATTG+AGG | + | chr1.3:1244356-1244375 | MS.gene64207:intron | 35.0% |
| AAACCTTATCCCACTAAGTG+GGG | - | chr1.3:1247792-1247811 | None:intergenic | 40.0% | |
| AAAGCAAAGACTCTTTCACC+TGG | + | chr1.3:1246489-1246508 | MS.gene64207:CDS | 40.0% | |
| AAAGGAGAAGATGAAGGTAG+AGG | - | chr1.3:1246531-1246550 | None:intergenic | 40.0% | |
| AAATACAAGGGAACCCTTGA+TGG | + | chr1.3:1246849-1246868 | MS.gene64207:CDS | 40.0% | |
| AAATACACAGCTTAGCAGGA+AGG | - | chr1.3:1244819-1244838 | None:intergenic | 40.0% | |
| AAGCAAAGACTCTTTCACCT+GGG | + | chr1.3:1246490-1246509 | MS.gene64207:CDS | 40.0% | |
| AAGGAGAAGATGAAGGTAGA+GGG | - | chr1.3:1246530-1246549 | None:intergenic | 40.0% | |
| AATCTACCTGCTTTGATTGC+AGG | + | chr1.3:1244560-1244579 | MS.gene64207:intron | 40.0% | |
| ACTATTGGAAACGGTAAAGC+AGG | + | chr1.3:1244640-1244659 | MS.gene64207:CDS | 40.0% | |
| AGAACACGCATTAACTGCTT+AGG | - | chr1.3:1244315-1244334 | None:intergenic | 40.0% | |
| AGATCAGGATGAAGATCGAA+AGG | - | chr1.3:1243995-1244014 | None:intergenic | 40.0% | |
| AGTAAGAGAGATGCTGATCA+TGG | + | chr1.3:1246810-1246829 | MS.gene64207:CDS | 40.0% | |
| ATAACCCTGAGGTGAATCAA+GGG | + | chr1.3:1244214-1244233 | MS.gene64207:intron | 40.0% | |
| ATAGAGAGAGAGAATGAGGA+AGG | - | chr1.3:1243326-1243345 | None:intergenic | 40.0% | |
| ATAGATGGAAATGCCAGAGT+CGG | - | chr1.3:1245315-1245334 | None:intergenic | 40.0% | |
| ATAGCCCTGTGTTGAATCAA+GGG | + | chr1.3:1243935-1243954 | MS.gene64207:intron | 40.0% | |
| ATAGTGATGCATAAGCATCC+TGG | - | chr1.3:1246662-1246681 | None:intergenic | 40.0% | |
| ATATCAAAAACTTGGGCCAC+TGG | + | chr1.3:1245005-1245024 | MS.gene64207:CDS | 40.0% | |
| ATCACTCGCCTTTATTCAAC+TGG | + | chr1.3:1245537-1245556 | MS.gene64207:CDS | 40.0% | |
| ATCGAACAGGTAAAAGGCAA+AGG | - | chr1.3:1243546-1243565 | None:intergenic | 40.0% | |
| ATTATGAGGGAAGGAAAGTG+AGG | + | chr1.3:1244447-1244466 | MS.gene64207:intron | 40.0% | |
| ATTCTTCATTCCCCACTTAG+TGG | + | chr1.3:1244387-1244406 | MS.gene64207:intron | 40.0% | |
| ATTGAAAAGGATGCACACAG+TGG | + | chr1.3:1247232-1247251 | MS.gene64207:CDS | 40.0% | |
| ATTTCGCCTTGGATATCACT+CGG | + | chr1.3:1247301-1247320 | MS.gene64207:CDS | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | - | chr1.3:1247793-1247812 | None:intergenic | 40.0% | |
| CAAGTCAACTAGAACAAGTC+TGG | - | chr1.3:1245427-1245446 | None:intergenic | 40.0% | |
| CAGAGCATAAAAGAACCGAT+GGG | + | chr1.3:1246916-1246935 | MS.gene64207:CDS | 40.0% | |
| CATGAAGGAAATTTGCAAGG+TGG | + | chr1.3:1244862-1244881 | MS.gene64207:CDS | 40.0% | |
| CGCATGCTAATTCCAAGTTA+GGG | + | chr1.3:1245220-1245239 | MS.gene64207:CDS | 40.0% | |
| CTAATATGCGACTTTAAGCG+GGG | - | chr1.3:1248182-1248201 | None:intergenic | 40.0% | |
| CTCGATCTGTTAAACGATCT+GGG | + | chr1.3:1244839-1244858 | MS.gene64207:CDS | 40.0% | |
| CTTGAGTGAGAATTCTTCAC+TGG | + | chr1.3:1247277-1247296 | MS.gene64207:CDS | 40.0% | |
| GAGACCATGTGAAAAATGAC+AGG | - | chr1.3:1246360-1246379 | None:intergenic | 40.0% | |
| GAGTTGCCCAAATTAAGTGA+AGG | + | chr1.3:1244925-1244944 | MS.gene64207:CDS | 40.0% | |
| GCAAACCTCCAGTTGAATAA+AGG | - | chr1.3:1245548-1245567 | None:intergenic | 40.0% | |
| GTGAACAAAGGAGAAGATGA+AGG | - | chr1.3:1246537-1246556 | None:intergenic | 40.0% | |
| GTGGATTCATATTAGGTCCA+AGG | - | chr1.3:1246590-1246609 | None:intergenic | 40.0% | |
| GTTCGATAAAATGCCTCACT+GGG | + | chr1.3:1243559-1243578 | MS.gene64207:intron | 40.0% | |
| TAATATCTGCTGCCTTGTCA+TGG | - | chr1.3:1245362-1245381 | None:intergenic | 40.0% | |
| TAGCTGTCTGATACCACAAT+AGG | + | chr1.3:1246136-1246155 | MS.gene64207:intron | 40.0% | |
| TCAGAGCATAAAAGAACCGA+TGG | + | chr1.3:1246915-1246934 | MS.gene64207:CDS | 40.0% | |
| TCCAAGGACATGTATGACAT+GGG | - | chr1.3:1246574-1246593 | None:intergenic | 40.0% | |
| TCTCGATCTGTTAAACGATC+TGG | + | chr1.3:1244838-1244857 | MS.gene64207:CDS | 40.0% | |
| TGAAAAAAGGAAGGAGCAAG+TGG | - | chr1.3:1246064-1246083 | None:intergenic | 40.0% | |
| TGAATTTCTCTGTGCTTTGC+AGG | + | chr1.3:1247130-1247149 | MS.gene64207:intron | 40.0% | |
| TGATTATGAAAGAGGCTGCA+AGG | + | chr1.3:1246632-1246651 | MS.gene64207:CDS | 40.0% | |
| TGATTCCCTCTGCAAAGATA+TGG | + | chr1.3:1245182-1245201 | MS.gene64207:CDS | 40.0% | |
| TGTCCAAAATGAGCACCTTT+CGG | + | chr1.3:1247208-1247227 | MS.gene64207:CDS | 40.0% | |
| TGTTCGATAAAATGCCTCAC+TGG | + | chr1.3:1243558-1243577 | MS.gene64207:intron | 40.0% | |
| TTCACACATGCAGTTCTTTG+AGG | - | chr1.3:1245691-1245710 | None:intergenic | 40.0% | |
| TTCTTCATTCCCCACTTAGT+GGG | + | chr1.3:1244388-1244407 | MS.gene64207:intron | 40.0% | |
| TTGAAAAGGATGCACACAGT+GGG | + | chr1.3:1247233-1247252 | MS.gene64207:CDS | 40.0% | |
| ! | AGCACCTTTCGGTATTGAAA+AGG | + | chr1.3:1247219-1247238 | MS.gene64207:CDS | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr1.3:1245958-1245977 | None:intergenic | 40.0% |
| ! | GCACACAGTGGGTTTAAAAT+GGG | + | chr1.3:1247244-1247263 | MS.gene64207:CDS | 40.0% |
| ! | GCAGGCACAAAAACATGTTT+TGG | + | chr1.3:1247148-1247167 | MS.gene64207:intron | 40.0% |
| ! | GCATCCTTTTCAATACCGAA+AGG | - | chr1.3:1247226-1247245 | None:intergenic | 40.0% |
| ! | GGAAGAGTGTATTCATTGAC+AGG | + | chr1.3:1244710-1244729 | MS.gene64207:CDS | 40.0% |
| ! | TAGTGTGTTTGATAACCCTG+AGG | + | chr1.3:1244203-1244222 | MS.gene64207:intron | 40.0% |
| ! | TCTTGATGATATTCCGACTC+TGG | + | chr1.3:1245299-1245318 | MS.gene64207:CDS | 40.0% |
| ! | TGCACACAGTGGGTTTAAAA+TGG | + | chr1.3:1247243-1247262 | MS.gene64207:CDS | 40.0% |
| !! | AGGGGAGGGTTTTTGAAAAA+AGG | - | chr1.3:1246077-1246096 | None:intergenic | 40.0% |
| !! | AGTGAGGCATTTTATCGAAC+AGG | - | chr1.3:1243559-1243578 | None:intergenic | 40.0% |
| !! | GCTTGGTTCTTGTTGTTGTT+TGG | + | chr1.3:1244416-1244435 | MS.gene64207:intron | 40.0% |
| !! | TACGGGTTCTAGAGATGAAA+AGG | + | chr1.3:1246887-1246906 | MS.gene64207:CDS | 40.0% |
| !! | TCTAGTTCTAGTCTGCTTGA+GGG | + | chr1.3:1244332-1244351 | MS.gene64207:intron | 40.0% |
| !! | TGCCGCTTTGGATTTAACTA+AGG | - | chr1.3:1245472-1245491 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr1.3:1245743-1245762 | MS.gene64207:intron | 40.0% |
| !! | TTCATCTCTAGAACCCGTAA+AGG | - | chr1.3:1246886-1246905 | None:intergenic | 40.0% |
| !! | TTCTAGTTCTAGTCTGCTTG+AGG | + | chr1.3:1244331-1244350 | MS.gene64207:intron | 40.0% |
| !! | TTGTTGTTGGCCATGCTTTT+AGG | + | chr1.3:1247817-1247836 | MS.gene64207:intron | 40.0% |
| !!! | AACATGTTTTGGTGTTGGCA+CGG | + | chr1.3:1247159-1247178 | MS.gene64207:CDS | 40.0% |
| !!! | ATACCGAAAGGTGCTCATTT+TGG | - | chr1.3:1247214-1247233 | None:intergenic | 40.0% |
| !!! | TCTAGTTTTAGTCTGCACGA+GGG | + | chr1.3:1244069-1244088 | MS.gene64207:intron | 40.0% |
| !!! | TGGTTTTGACACGACCTTTA+CGG | + | chr1.3:1246869-1246888 | MS.gene64207:CDS | 40.0% |
| !!! | TTCTAGTTTTAGTCTGCACG+AGG | + | chr1.3:1244068-1244087 | MS.gene64207:intron | 40.0% |
| AAACTCGCAGACAAAGCCTT+AGG | + | chr1.3:1246099-1246118 | MS.gene64207:intron | 45.0% | |
| AACCTTTCACATGGCTGCTT+TGG | + | chr1.3:1245030-1245049 | MS.gene64207:CDS | 45.0% | |
| AAGTACAGTGAAACCCAGTG+AGG | - | chr1.3:1243575-1243594 | None:intergenic | 45.0% | |
| ACACACCCTTGATTCAACAC+AGG | - | chr1.3:1243943-1243962 | None:intergenic | 45.0% | |
| ACACCTTCTCTGGTGAACAA+AGG | - | chr1.3:1246549-1246568 | None:intergenic | 45.0% | |
| ACCCATGTCATACATGTCCT+TGG | + | chr1.3:1246570-1246589 | MS.gene64207:CDS | 45.0% | |
| ACGCATAACCTCTTCACAGA+AGG | - | chr1.3:1243482-1243501 | None:intergenic | 45.0% | |
| ACTCGCCTTTATTCAACTGG+AGG | + | chr1.3:1245540-1245559 | MS.gene64207:CDS | 45.0% | |
| AGCTACTGTCTATGGAGTTG+AGG | + | chr1.3:1248123-1248142 | MS.gene64207:CDS | 45.0% | |
| AGGTCGTGTCAAAACCATCA+AGG | - | chr1.3:1246866-1246885 | None:intergenic | 45.0% | |
| ATGCTCTAGCAGCACTACTT+AGG | - | chr1.3:1244681-1244700 | None:intergenic | 45.0% | |
| ATGGACCTCGACAACAACAA+AGG | + | chr1.3:1243287-1243306 | MS.gene64207:CDS | 45.0% | |
| ATTCCCCACTTAGTGGGAAA+AGG | + | chr1.3:1244394-1244413 | MS.gene64207:intron | 45.0% | |
| CACACCCTTGATTCAACACA+GGG | - | chr1.3:1243942-1243961 | None:intergenic | 45.0% | |
| CATAACCTCTTCACAGAAGG+TGG | - | chr1.3:1243479-1243498 | None:intergenic | 45.0% | |
| CCAAACCTTATCCCACTAAG+TGG | - | chr1.3:1247794-1247813 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGGTT+TGG | + | chr1.3:1247791-1247810 | MS.gene64207:intron | 45.0% | |
| CCTGCTTACCTACTCGAAAA+CGG | + | chr1.3:1248221-1248240 | MS.gene64207:CDS | 45.0% | |
| CGAGAAATACACAGCTTAGC+AGG | - | chr1.3:1244823-1244842 | None:intergenic | 45.0% | |
| CTGCCTTGTCATGGTTGAAT+TGG | - | chr1.3:1245353-1245372 | None:intergenic | 45.0% | |
| CTGCTTACCTACTCGAAAAC+GGG | + | chr1.3:1248222-1248241 | MS.gene64207:CDS | 45.0% | |
| CTGTCTGATACCACAATAGG+AGG | + | chr1.3:1246139-1246158 | MS.gene64207:intron | 45.0% | |
| GAAATCCACCTTCTGTGAAG+AGG | + | chr1.3:1243471-1243490 | MS.gene64207:CDS | 45.0% | |
| GAAGGTCAAGTACAACTGCA+TGG | - | chr1.3:1244801-1244820 | None:intergenic | 45.0% | |
| GACTTTAAGCGGGGTATGTT+TGG | - | chr1.3:1248173-1248192 | None:intergenic | 45.0% | |
| GAGAGATGCTGATCATGGAT+TGG | + | chr1.3:1246815-1246834 | MS.gene64207:CDS | 45.0% | |
| GATAACCCTGAGGTGAATCA+AGG | + | chr1.3:1244213-1244232 | MS.gene64207:intron | 45.0% | |
| GATAGCCCTGTGTTGAATCA+AGG | + | chr1.3:1243934-1243953 | MS.gene64207:intron | 45.0% | |
| GCGCATGCTAATTCCAAGTT+AGG | + | chr1.3:1245219-1245238 | MS.gene64207:CDS | 45.0% | |
| GGGCATGAAGGAAATTTGCA+AGG | + | chr1.3:1244859-1244878 | MS.gene64207:CDS | 45.0% | |
| GGTCAGACTGATAAATCTGC+TGG | + | chr1.3:1245255-1245274 | MS.gene64207:CDS | 45.0% | |
| GGTCGTGTCAAAACCATCAA+GGG | - | chr1.3:1246865-1246884 | None:intergenic | 45.0% | |
| GTCCAAGGACATGTATGACA+TGG | - | chr1.3:1246575-1246594 | None:intergenic | 45.0% | |
| GTTAAACGATCTGGGCATGA+AGG | + | chr1.3:1244847-1244866 | MS.gene64207:CDS | 45.0% | |
| TAACCCTGAGGTGAATCAAG+GGG | + | chr1.3:1244215-1244234 | MS.gene64207:intron | 45.0% | |
| TAGCGATCGAGGAAATCCTA+AGG | - | chr1.3:1246118-1246137 | None:intergenic | 45.0% | |
| TCATTGCAAATGCTGCGAAC+TGG | + | chr1.3:1245577-1245596 | MS.gene64207:CDS | 45.0% | |
| TCGAGTAGGTAAGCAGGAAA+GGG | - | chr1.3:1248218-1248237 | None:intergenic | 45.0% | |
| TCTCCTTTGTTCACCAGAGA+AGG | + | chr1.3:1246543-1246562 | MS.gene64207:CDS | 45.0% | |
| TCTTCACTGGTATTTCGCCT+TGG | + | chr1.3:1247290-1247309 | MS.gene64207:CDS | 45.0% | |
| TGACGACAAGCTACTGTCTA+TGG | + | chr1.3:1248115-1248134 | MS.gene64207:CDS | 45.0% | |
| TGCATACCGAGTGATATCCA+AGG | - | chr1.3:1247310-1247329 | None:intergenic | 45.0% | |
| TGGAATTAGCATGCGCTGTT+GGG | - | chr1.3:1245215-1245234 | None:intergenic | 45.0% | |
| TTCGAGTAGGTAAGCAGGAA+AGG | - | chr1.3:1248219-1248238 | None:intergenic | 45.0% | |
| TTGGAATTAGCATGCGCTGT+TGG | - | chr1.3:1245216-1245235 | None:intergenic | 45.0% | |
| ! | AAAGAAGGCATGGGGATCAT+GGG | + | chr1.3:1246944-1246963 | MS.gene64207:CDS | 45.0% |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr1.3:1244400-1244419 | None:intergenic | 45.0% |
| ! | ACAAGGTACCTTGCACACTA+AGG | + | chr1.3:1247594-1247613 | MS.gene64207:intron | 45.0% |
| ! | ATAGAGAACTTTGGGAGAGG+AGG | - | chr1.3:1246036-1246055 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr1.3:1244401-1244420 | None:intergenic | 45.0% |
| ! | CGCAGATGCAAAACCCATTT+TGG | + | chr1.3:1243420-1243439 | MS.gene64207:intron | 45.0% |
| ! | CTGGTACCTCTACCTTTTTC+AGG | - | chr1.3:1245101-1245120 | None:intergenic | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr1.3:1245748-1245767 | MS.gene64207:intron | 45.0% |
| ! | GCATCAATTTTTGATGCCGC+AGG | + | chr1.3:1246438-1246457 | MS.gene64207:CDS | 45.0% |
| ! | GCTCATTTTGGACATCTGAC+AGG | - | chr1.3:1247202-1247221 | None:intergenic | 45.0% |
| ! | GTAATCTTAGTTGGTGCACC+TGG | + | chr1.3:1243442-1243461 | MS.gene64207:CDS | 45.0% |
| ! | TAAGGCTTTGTCTGCGAGTT+TGG | - | chr1.3:1246100-1246119 | None:intergenic | 45.0% |
| ! | TAGAGAACTTTGGGAGAGGA+GGG | - | chr1.3:1246035-1246054 | None:intergenic | 45.0% |
| ! | TGAGGGCTTCTAGGTGTTTT+TGG | + | chr1.3:1244349-1244368 | MS.gene64207:intron | 45.0% |
| !! | AACGTTCTTTTCTGCCGCTT+TGG | - | chr1.3:1245484-1245503 | None:intergenic | 45.0% |
| !! | CTGCTAGAGCATTGAAGGAT+GGG | + | chr1.3:1244689-1244708 | MS.gene64207:CDS | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr1.3:1245747-1245766 | MS.gene64207:intron | 45.0% |
| !! | GGAAACCTTTGTTGTTGTCG+AGG | - | chr1.3:1243295-1243314 | None:intergenic | 45.0% |
| !! | GGTTTTGACACGACCTTTAC+GGG | + | chr1.3:1246870-1246889 | MS.gene64207:CDS | 45.0% |
| !! | TAGTGCTGCTAGAGCATTGA+AGG | + | chr1.3:1244684-1244703 | MS.gene64207:CDS | 45.0% |
| !!! | AGGAGGGTTTTGGAAGGTTT+TGG | - | chr1.3:1245948-1245967 | None:intergenic | 45.0% |
| !!! | AGGGTTTTGGAAGGTTTTGG+AGG | - | chr1.3:1245945-1245964 | None:intergenic | 45.0% |
| !!! | GGGTTTTGGAAGGTTTTGGA+GGG | - | chr1.3:1245944-1245963 | None:intergenic | 45.0% |
| !!! | TATTGGAGGAGGGTTTTGGA+AGG | - | chr1.3:1245954-1245973 | None:intergenic | 45.0% |
| !!! | AAGTTTTTTTTAATTTTTAT+GGG | + | chr1.3:1247749-1247768 | MS.gene64207:intron | 5.0% |
| !!! | TAAGTTTTTTTTAATTTTTA+TGG | + | chr1.3:1247748-1247767 | MS.gene64207:intron | 5.0% |
| !!! | TTTTTTTTTAATAATGTTTT+CGG | + | chr1.3:1246326-1246345 | MS.gene64207:intron | 5.0% |
| ACACCCCTTGATTCACCTCA+GGG | - | chr1.3:1244221-1244240 | None:intergenic | 50.0% | |
| ATTTGCAGGCGACTGAAACC+TGG | + | chr1.3:1246399-1246418 | MS.gene64207:intron | 50.0% | |
| CCACTGGAGAACCTTTCACA+TGG | + | chr1.3:1245021-1245040 | MS.gene64207:CDS | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr1.3:1244399-1244418 | MS.gene64207:intron | 50.0% | |
| CCATGTGAAAGGTTCTCCAG+TGG | - | chr1.3:1245024-1245043 | None:intergenic | 50.0% | |
| CTACCTGCTTTGATTGCAGG+AGG | + | chr1.3:1244563-1244582 | MS.gene64207:intron | 50.0% | |
| CTGGGAAGTAGAGTCTCCAA+TGG | - | chr1.3:1245148-1245167 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.3:1247788-1247807 | None:intergenic | 50.0% | |
| CTTTGTCTGCGAGTTTGGAG+GGG | - | chr1.3:1246095-1246114 | None:intergenic | 50.0% | |
| GACCAAAGCAGCCATGTGAA+AGG | - | chr1.3:1245035-1245054 | None:intergenic | 50.0% | |
| GACTCTACTTCCCAGACTTC+TGG | + | chr1.3:1245153-1245172 | MS.gene64207:CDS | 50.0% | |
| GCGAGTGATGTCTCCAACAT+GGG | - | chr1.3:1245526-1245545 | None:intergenic | 50.0% | |
| GCTGCGGCCAAATTGAATTG+AGG | + | chr1.3:1247419-1247438 | MS.gene64207:intron | 50.0% | |
| GCTTTGTCTGCGAGTTTGGA+GGG | - | chr1.3:1246096-1246115 | None:intergenic | 50.0% | |
| TAGTCTGCTTGAGGGCTTCT+AGG | + | chr1.3:1244340-1244359 | MS.gene64207:intron | 50.0% | |
| TATCAGACAGCTAGCGATCG+AGG | - | chr1.3:1246129-1246148 | None:intergenic | 50.0% | |
| TGCCTTCTTTGTGCTCCCAT+CGG | - | chr1.3:1246934-1246953 | None:intergenic | 50.0% | |
| TGGACATGTCTACGTTCTGC+AGG | + | chr1.3:1247929-1247948 | MS.gene64207:intron | 50.0% | |
| TTAGTCTGCACGAGGGCTTT+AGG | + | chr1.3:1244076-1244095 | MS.gene64207:intron | 50.0% | |
| TTGGTTGCAGACTCCAGTTC+AGG | - | chr1.3:1246465-1246484 | None:intergenic | 50.0% | |
| ! | AACCGATGGGAGCACAAAGA+AGG | + | chr1.3:1246929-1246948 | MS.gene64207:CDS | 50.0% |
| ! | ATGGGAGCACAAAGAAGGCA+TGG | + | chr1.3:1246934-1246953 | MS.gene64207:CDS | 50.0% |
| ! | CAAAGAAGGCATGGGGATCA+TGG | + | chr1.3:1246943-1246962 | MS.gene64207:CDS | 50.0% |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr1.3:1244402-1244421 | None:intergenic | 50.0% |
| ! | CGTGTGTTGCTAGCACTACT+CGG | + | chr1.3:1243714-1243733 | MS.gene64207:intron | 50.0% |
| ! | GTGTGTTGCTAGCACTACTC+GGG | + | chr1.3:1243715-1243734 | MS.gene64207:intron | 50.0% |
| ! | TGGGAGCACAAAGAAGGCAT+GGG | + | chr1.3:1246935-1246954 | MS.gene64207:CDS | 50.0% |
| ! | TTAGTTGGTGCACCTGGAAG+CGG | + | chr1.3:1243448-1243467 | MS.gene64207:CDS | 50.0% |
| !! | GCTGCTAGAGCATTGAAGGA+TGG | + | chr1.3:1244688-1244707 | MS.gene64207:CDS | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr1.3:1245746-1245765 | MS.gene64207:intron | 50.0% |
| !!! | CCGTTTTCGAGTAGGTAAGC+AGG | - | chr1.3:1248224-1248243 | None:intergenic | 50.0% |
| AACCTGACAAACGCGAACCC+AGG | - | chr1.3:1243518-1243537 | None:intergenic | 55.0% | |
| AAGAGGCTGCAAGGTTCTCC+AGG | + | chr1.3:1246641-1246660 | MS.gene64207:CDS | 55.0% | |
| AGACTCCAGTTCAGGACCTG+CGG | - | chr1.3:1246457-1246476 | None:intergenic | 55.0% | |
| CACACCCCTTGATTCACCTC+AGG | - | chr1.3:1244222-1244241 | None:intergenic | 55.0% | |
| CCACCTCCTGCAATCAAAGC+AGG | - | chr1.3:1244569-1244588 | None:intergenic | 55.0% | |
| CCTACTCGAAAACGGGCGTT+TGG | + | chr1.3:1248229-1248248 | MS.gene64207:CDS | 55.0% | |
| CCTGCTTTGATTGCAGGAGG+TGG | + | chr1.3:1244566-1244585 | MS.gene64207:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.3:1247786-1247805 | MS.gene64207:intron | 55.0% | |
| CTCGAAAACGGGCGTTTGGT+TGG | + | chr1.3:1248233-1248252 | MS.gene64207:CDS | 55.0% | |
| GACATGGGTCACACCTTCTC+TGG | - | chr1.3:1246559-1246578 | None:intergenic | 55.0% | |
| GGCGAGTGATGTCTCCAACA+TGG | - | chr1.3:1245527-1245546 | None:intergenic | 55.0% | |
| GGGACAACAACAGCATTCCC+AGG | - | chr1.3:1246510-1246529 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | + | chr1.3:1245752-1245771 | MS.gene64207:intron | 55.0% | |
| TAGGTCCGACCCCACTTAGT+GGG | + | chr1.3:1247780-1247799 | MS.gene64207:intron | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | + | chr1.3:1245751-1245770 | MS.gene64207:intron | 55.0% | |
| TTTGGGAGAGGAGGGCTTTG+GGG | - | chr1.3:1246027-1246046 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | + | chr1.3:1245753-1245772 | MS.gene64207:intron | 55.0% | |
| ! | AAGGTGGATTTCCCGCTTCC+AGG | - | chr1.3:1243463-1243482 | None:intergenic | 55.0% |
| ! | ACTTTGGGAGAGGAGGGCTT+TGG | - | chr1.3:1246029-1246048 | None:intergenic | 55.0% |
| ! | CTTTGGGAGAGGAGGGCTTT+GGG | - | chr1.3:1246028-1246047 | None:intergenic | 55.0% |
| ! | GGCTTTGTCTGCGAGTTTGG+AGG | - | chr1.3:1246097-1246116 | None:intergenic | 55.0% |
| ! | GGGAGCACAAAGAAGGCATG+GGG | + | chr1.3:1246936-1246955 | MS.gene64207:CDS | 55.0% |
| ! | TAGTTGGTGCACCTGGAAGC+GGG | + | chr1.3:1243449-1243468 | MS.gene64207:CDS | 55.0% |
| !!! | CCAAACGCCCGTTTTCGAGT+AGG | - | chr1.3:1248232-1248251 | None:intergenic | 55.0% |
| !!! | GTTTTGGTGTTGGCACGGAG+TGG | + | chr1.3:1247164-1247183 | MS.gene64207:CDS | 55.0% |
| CACCTGGGTTCGCGTTTGTC+AGG | + | chr1.3:1243513-1243532 | MS.gene64207:CDS | 60.0% | |
| CTAGGTCCGACCCCACTTAG+TGG | + | chr1.3:1247779-1247798 | MS.gene64207:intron | 60.0% | |
| GCGTTCCTCTTCTCGCACCT+GGG | + | chr1.3:1243498-1243517 | MS.gene64207:CDS | 60.0% | |
| GTCTGCGAGTTTGGAGGGGA+GGG | - | chr1.3:1246091-1246110 | None:intergenic | 60.0% | |
| TGATGCCGCAGGTCCTGAAC+TGG | + | chr1.3:1246449-1246468 | MS.gene64207:CDS | 60.0% | |
| TGCAGGCGACTGAAACCTGG+CGG | + | chr1.3:1246402-1246421 | MS.gene64207:intron | 60.0% | |
| TGCGTTCCTCTTCTCGCACC+TGG | + | chr1.3:1243497-1243516 | MS.gene64207:CDS | 60.0% | |
| TGTCTGCGAGTTTGGAGGGG+AGG | - | chr1.3:1246092-1246111 | None:intergenic | 60.0% | |
| ! | TTGGGAGAGGAGGGCTTTGG+GGG | - | chr1.3:1246026-1246045 | None:intergenic | 60.0% |
| !! | TTGGTGTTGGCACGGAGTGG+AGG | + | chr1.3:1247167-1247186 | MS.gene64207:CDS | 60.0% |
| !!! | AGGGGAGGGTTTTGGGTGGT+AGG | + | chr1.3:1245771-1245790 | MS.gene64207:intron | 60.0% |
| AGGCGACTGAAACCTGGCGG+TGG | + | chr1.3:1246405-1246424 | MS.gene64207:intron | 65.0% | |
| CGACTGAAACCTGGCGGTGG+AGG | + | chr1.3:1246408-1246427 | MS.gene64207:CDS | 65.0% | |
| GCGAACCCAGGTGCGAGAAG+AGG | - | chr1.3:1243506-1243525 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | + | chr1.3:1245757-1245776 | MS.gene64207:intron | 65.0% | |
| ! | GCATTGACACCTCCACCGCC+AGG | - | chr1.3:1246420-1246439 | None:intergenic | 65.0% |
| ! | GGAGGGGAGGGGAGGGTTTT+GGG | + | chr1.3:1245764-1245783 | MS.gene64207:intron | 65.0% |
| ! | TGGAGGGGAGGGGAGGGTTT+TGG | + | chr1.3:1245763-1245782 | MS.gene64207:intron | 65.0% |
| !! | TGGGAGAGGAGGGCTTTGGG+GGG | - | chr1.3:1246025-1246044 | None:intergenic | 65.0% |
| GGGAGTTTGGAGGGGAGGGG+AGG | + | chr1.3:1245756-1245775 | MS.gene64207:intron | 70.0% | |
| !!! | GGGGAGGGGAGGGTTTTGGG+TGG | + | chr1.3:1245767-1245786 | MS.gene64207:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 1243275 | 1248271 | 1243275 | ID=MS.gene64207 |
| chr1.3 | mRNA | 1243275 | 1248271 | 1243275 | ID=MS.gene64207.t1;Parent=MS.gene64207 |
| chr1.3 | exon | 1243275 | 1243308 | 1243275 | ID=MS.gene64207.t1.exon1;Parent=MS.gene64207.t1 |
| chr1.3 | CDS | 1243275 | 1243308 | 1243275 | ID=cds.MS.gene64207.t1;Parent=MS.gene64207.t1 |
| chr1.3 | exon | 1243425 | 1243534 | 1243425 | ID=MS.gene64207.t1.exon2;Parent=MS.gene64207.t1 |
| chr1.3 | CDS | 1243425 | 1243534 | 1243425 | ID=cds.MS.gene64207.t1;Parent=MS.gene64207.t1 |
| chr1.3 | exon | 1244637 | 1245598 | 1244637 | ID=MS.gene64207.t1.exon3;Parent=MS.gene64207.t1 |
| chr1.3 | CDS | 1244637 | 1245598 | 1244637 | ID=cds.MS.gene64207.t1;Parent=MS.gene64207.t1 |
| chr1.3 | exon | 1246407 | 1247067 | 1246407 | ID=MS.gene64207.t1.exon4;Parent=MS.gene64207.t1 |
| chr1.3 | CDS | 1246407 | 1247067 | 1246407 | ID=cds.MS.gene64207.t1;Parent=MS.gene64207.t1 |
| chr1.3 | exon | 1247152 | 1247322 | 1247152 | ID=MS.gene64207.t1.exon5;Parent=MS.gene64207.t1 |
| chr1.3 | CDS | 1247152 | 1247322 | 1247152 | ID=cds.MS.gene64207.t1;Parent=MS.gene64207.t1 |
| chr1.3 | exon | 1247951 | 1248271 | 1247951 | ID=MS.gene64207.t1.exon6;Parent=MS.gene64207.t1 |
| chr1.3 | CDS | 1247951 | 1248271 | 1247951 | ID=cds.MS.gene64207.t1;Parent=MS.gene64207.t1 |
| Gene Sequence |
| Protein sequence |
