Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71202.t1 | XP_003628787.1 | 98.8 | 344 | 3 | 1 | 1 | 343 | 1 | 344 | 7.80E-191 | 676.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71202.t1 | A0JJZ6 | 57.8 | 334 | 133 | 5 | 3 | 334 | 12 | 339 | 2.0e-102 | 374.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71202.t1 | G7LH14 | 98.8 | 344 | 3 | 1 | 1 | 343 | 1 | 344 | 5.6e-191 | 676.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene71202 | 0.811215 | 7.83E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene71202 | 0.822283 | 2.57E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene71202 | 0.821038 | 4.99E-53 | -1.69E-46 |
| MS.gene050384 | MS.gene71202 | 0.812146 | 4.91E-51 | -1.69E-46 |
| MS.gene050386 | MS.gene71202 | 0.803027 | 4.24E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene71202 | 0.821577 | 3.75E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene71202 | 0.827272 | 1.71E-54 | -1.69E-46 |
| MS.gene050901 | MS.gene71202 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene71202 | 0.814472 | 1.51E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene71202 | 0.835831 | 1.33E-56 | -1.69E-46 |
| MS.gene051975 | MS.gene71202 | 0.809191 | 2.14E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene71202 | -0.817392 | 3.38E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene71202 | 0.807226 | 5.61E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene71202 | 0.83453 | 2.84E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene71202 | 0.813236 | 2.83E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene71202 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene71202 | 0.814575 | 1.44E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene71202 | 0.832473 | 9.27E-56 | -1.69E-46 |
| MS.gene056215 | MS.gene71202 | 0.81104 | 8.54E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene71202 | 0.84405 | 9.61E-59 | -1.69E-46 |
| MS.gene056507 | MS.gene71202 | 0.807536 | 4.82E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene71202 | 0.80696 | 6.38E-50 | -1.69E-46 |
| MS.gene056973 | MS.gene71202 | 0.828075 | 1.10E-54 | -1.69E-46 |
| MS.gene057320 | MS.gene71202 | 0.805056 | 1.60E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene71202 | 0.809395 | 1.93E-50 | -1.69E-46 |
| MS.gene057600 | MS.gene71202 | 0.810276 | 1.25E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene71202 | 0.832457 | 9.35E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene71202 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene71202 | 0.819498 | 1.13E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene71202 | 0.804188 | 2.44E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene71202 | 0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene058919 | MS.gene71202 | 0.812169 | 4.85E-51 | -1.69E-46 |
| MS.gene059007 | MS.gene71202 | 0.806629 | 7.50E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene71202 | 0.805477 | 1.31E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene71202 | 0.801054 | 1.08E-48 | -1.69E-46 |
| MS.gene060259 | MS.gene71202 | 0.821281 | 4.39E-53 | -1.69E-46 |
| MS.gene060918 | MS.gene71202 | 0.80542 | 1.35E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene71202 | 0.818455 | 1.94E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene71202 | 0.808631 | 2.82E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene71202 | 0.81793 | 2.55E-52 | -1.69E-46 |
| MS.gene061006 | MS.gene71202 | 0.804761 | 1.85E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene71202 | 0.831711 | 1.43E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71202.t1 | MTR_8g066720 | 97.403 | 385 | 9 | 1 | 1 | 384 | 1 | 385 | 0.0 | 757 |
| MS.gene71202.t1 | MTR_4g105690 | 50.159 | 315 | 141 | 5 | 9 | 319 | 10 | 312 | 6.28e-104 | 310 |
| MS.gene71202.t1 | MTR_1g105930 | 43.218 | 317 | 157 | 6 | 8 | 318 | 32 | 331 | 1.61e-82 | 256 |
| MS.gene71202.t1 | MTR_5g005370 | 42.056 | 321 | 165 | 7 | 8 | 323 | 13 | 317 | 7.11e-76 | 238 |
| MS.gene71202.t1 | MTR_5g005370 | 42.056 | 321 | 165 | 7 | 8 | 323 | 13 | 317 | 3.59e-75 | 238 |
| MS.gene71202.t1 | MTR_5g005370 | 41.250 | 320 | 158 | 8 | 8 | 323 | 13 | 306 | 1.60e-69 | 221 |
| MS.gene71202.t1 | MTR_5g005370 | 41.554 | 296 | 154 | 6 | 32 | 323 | 2 | 282 | 3.39e-67 | 214 |
| MS.gene71202.t1 | MTR_5g005370 | 41.695 | 295 | 151 | 7 | 30 | 319 | 7 | 285 | 5.91e-67 | 214 |
| MS.gene71202.t1 | MTR_1g105930 | 42.188 | 256 | 125 | 6 | 69 | 318 | 63 | 301 | 2.52e-57 | 189 |
| MS.gene71202.t1 | MTR_3g067725 | 25.077 | 323 | 208 | 10 | 4 | 305 | 158 | 467 | 2.65e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71202.t1 | AT5G16760 | 57.143 | 315 | 127 | 4 | 8 | 322 | 10 | 316 | 5.72e-125 | 363 |
| MS.gene71202.t1 | AT4G08170 | 44.272 | 323 | 162 | 6 | 4 | 322 | 38 | 346 | 1.80e-87 | 269 |
| MS.gene71202.t1 | AT4G33770 | 41.905 | 315 | 162 | 6 | 8 | 318 | 82 | 379 | 9.57e-77 | 242 |
| MS.gene71202.t1 | AT4G33770 | 41.379 | 290 | 149 | 6 | 33 | 318 | 14 | 286 | 2.89e-69 | 220 |
| MS.gene71202.t1 | AT4G08170 | 43.233 | 266 | 133 | 6 | 61 | 322 | 7 | 258 | 2.70e-67 | 214 |
| MS.gene71202.t1 | AT4G08170 | 43.290 | 231 | 113 | 6 | 96 | 322 | 1 | 217 | 2.60e-54 | 179 |
| MS.gene71202.t1 | AT4G08170 | 43.290 | 231 | 113 | 6 | 96 | 322 | 1 | 217 | 2.60e-54 | 179 |
| MS.gene71202.t1 | AT4G08170 | 43.290 | 231 | 113 | 6 | 96 | 322 | 1 | 217 | 2.60e-54 | 179 |
| MS.gene71202.t1 | AT4G08170 | 43.290 | 231 | 113 | 6 | 96 | 322 | 1 | 217 | 2.60e-54 | 179 |
| MS.gene71202.t1 | AT4G08170 | 43.290 | 231 | 113 | 6 | 96 | 322 | 1 | 217 | 2.60e-54 | 179 |
| MS.gene71202.t1 | AT4G33770 | 40.969 | 227 | 113 | 6 | 96 | 318 | 1 | 210 | 2.21e-45 | 155 |
| MS.gene71202.t1 | AT2G43980 | 28.037 | 214 | 127 | 7 | 126 | 331 | 294 | 488 | 7.65e-16 | 79.3 |
Find 88 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACGGTCCTTGATCGATTA+AGG | 0.193555 | 8.3:-36346001 | None:intergenic |
| TTGGGAGAGTTTAAAGTTTC+CGG | 0.228751 | 8.3:+36346275 | MS.gene71202:CDS |
| CATAAATCACGATCTGTTTC+GGG | 0.236712 | 8.3:-36346224 | None:intergenic |
| CTGAGCTTAGGGTTAGGGTT+GGG | 0.247742 | 8.3:+36346169 | MS.gene71202:CDS |
| ATCGATATTAATTACTTTCC+AGG | 0.292851 | 8.3:+36346744 | MS.gene71202:CDS |
| TCATAAATCACGATCTGTTT+CGG | 0.307302 | 8.3:-36346225 | None:intergenic |
| AGGGTTTGGTTGAATCGATT+TGG | 0.308710 | 8.3:-36345981 | None:intergenic |
| TAACCGAATTTCAATGCTTC+AGG | 0.312842 | 8.3:+36346140 | MS.gene71202:CDS |
| CGTGAAGAGGAAGTCTTTAC+AGG | 0.313269 | 8.3:+36346467 | MS.gene71202:CDS |
| TGAGCTTAGGGTTAGGGTTG+GGG | 0.323983 | 8.3:+36346170 | MS.gene71202:CDS |
| GAGAAGAAACACGGCGTAAT+AGG | 0.331686 | 8.3:+36345874 | MS.gene71202:CDS |
| AAGCGCGAAATCGCATAAAA+TGG | 0.333115 | 8.3:+36346326 | MS.gene71202:CDS |
| TTGTTTCTGAGCTTAGGGTT+AGG | 0.343936 | 8.3:+36346163 | MS.gene71202:CDS |
| TCCTTGATCGATTAAGGGTT+TGG | 0.350560 | 8.3:-36345995 | None:intergenic |
| AGGGTTGGGGTTGATGAAAA+AGG | 0.360059 | 8.3:+36346183 | MS.gene71202:CDS |
| TGTTTCTGAGCTTAGGGTTA+GGG | 0.363650 | 8.3:+36346164 | MS.gene71202:CDS |
| TCAGGTTGTTTCTGAGCTTA+GGG | 0.365845 | 8.3:+36346158 | MS.gene71202:CDS |
| CTCTTTCTGATGGTCAGGCT+TGG | 0.368219 | 8.3:+36346256 | MS.gene71202:CDS |
| GCGTCGAGGATAACAGCATT+AGG | 0.370797 | 8.3:-36346093 | None:intergenic |
| GGAGAAAGTGTTGGGTGTTT+CGG | 0.377815 | 8.3:+36346500 | MS.gene71202:CDS |
| TTCAGGTTGTTTCTGAGCTT+AGG | 0.380717 | 8.3:+36346157 | MS.gene71202:CDS |
| GTGATTCGTGATTCTAGATA+TGG | 0.383544 | 8.3:+36346705 | MS.gene71202:CDS |
| AATCGTCGCCGTAGAGTTTG+TGG | 0.389966 | 8.3:-36346035 | None:intergenic |
| AGGTGTCGAATTTGGCGAAT+AGG | 0.390772 | 8.3:+36346544 | MS.gene71202:CDS |
| CAACCTGAAGCATTGAAATT+CGG | 0.403669 | 8.3:-36346143 | None:intergenic |
| AACGGTCCTTGATCGATTAA+GGG | 0.404496 | 8.3:-36346000 | None:intergenic |
| CGATGAGGGTAAATCTGTTA+AGG | 0.414736 | 8.3:+36346863 | MS.gene71202:CDS |
| ACAAATTCCTGCAAAACAAT+AGG | 0.415605 | 8.3:-36346390 | None:intergenic |
| CCGTGTTTCTTCTCAGCCAT+TGG | 0.419625 | 8.3:-36345865 | None:intergenic |
| TTGCAGGAATTTGTGAATCA+TGG | 0.419856 | 8.3:+36346399 | MS.gene71202:CDS |
| GGTGTCGAATTTGGCGAATA+GGG | 0.420308 | 8.3:+36346545 | MS.gene71202:CDS |
| TGAAGACGCTCAATCGCTTC+CGG | 0.428110 | 8.3:-36346117 | None:intergenic |
| TCTTTCTGATGGTCAGGCTT+GGG | 0.434503 | 8.3:+36346257 | MS.gene71202:CDS |
| CGTCGAGGATAACAGCATTA+GGG | 0.435245 | 8.3:-36346092 | None:intergenic |
| AGAGACTCTTTCTGATGGTC+AGG | 0.437751 | 8.3:+36346251 | MS.gene71202:CDS |
| TGCAGGAATTTGTGAATCAT+GGG | 0.454515 | 8.3:+36346400 | MS.gene71202:CDS |
| TTTATTGTTGATATTGCTAG+TGG | 0.461035 | 8.3:+36346642 | MS.gene71202:CDS |
| CCAGGGTATGCTAAAATGCC+GGG | 0.463616 | 8.3:+36346762 | MS.gene71202:CDS |
| TCTGAGCTTAGGGTTAGGGT+TGG | 0.465651 | 8.3:+36346168 | MS.gene71202:CDS |
| TAATTCCGCGTGATGAAGCT+AGG | 0.466617 | 8.3:-36345951 | None:intergenic |
| ACAAACTCTACGGCGACGAT+TGG | 0.468878 | 8.3:+36346037 | MS.gene71202:CDS |
| TACTACTGAGATGCCGCCTC+AGG | 0.477569 | 8.3:+36346617 | MS.gene71202:CDS |
| TCCAGGGTATGCTAAAATGC+CGG | 0.479177 | 8.3:+36346761 | MS.gene71202:CDS |
| CGATTTAATGTGCAAGGAGG+TGG | 0.479403 | 8.3:+36346815 | MS.gene71202:CDS |
| GAATTTGAAATTGTTGAAGC+TGG | 0.486045 | 8.3:-36346065 | None:intergenic |
| GTGATTCTAGATATGGTAAC+CGG | 0.490690 | 8.3:+36346712 | MS.gene71202:CDS |
| TCGATATTAATTACTTTCCA+GGG | 0.504005 | 8.3:+36346745 | MS.gene71202:CDS |
| GCGCTTCCATCGGCCACCAA+CGG | 0.508538 | 8.3:-36346309 | None:intergenic |
| ATGCGATTTCGCGCTTCCAT+CGG | 0.510779 | 8.3:-36346319 | None:intergenic |
| TGCTGTTATCCTCGACGCGC+CGG | 0.514143 | 8.3:+36346098 | MS.gene71202:CDS |
| GTGGATGAAAATGTGGGAAA+GGG | 0.524112 | 8.3:+36346834 | MS.gene71202:CDS |
| GGTGATAGCGAAGCCGTTGG+TGG | 0.526321 | 8.3:+36346296 | MS.gene71202:CDS |
| ACCAAACCCTTAATCGATCA+AGG | 0.529800 | 8.3:+36345994 | MS.gene71202:CDS |
| GTCAAAACTTTCTCATACCC+CGG | 0.530072 | 8.3:-36346780 | None:intergenic |
| GTCTTTACAGGATGTTTCTG+AGG | 0.534182 | 8.3:+36346479 | MS.gene71202:CDS |
| TTGATATTGCTAGTGGATTG+AGG | 0.534605 | 8.3:+36346649 | MS.gene71202:CDS |
| GTTTCTGAGGAGAAAGTGTT+GGG | 0.536938 | 8.3:+36346492 | MS.gene71202:CDS |
| TAATATCGATAATAAGATAC+CGG | 0.541678 | 8.3:-36346731 | None:intergenic |
| GAAAGTGTTGGGTGTTTCGG+AGG | 0.542694 | 8.3:+36346503 | MS.gene71202:CDS |
| GCGAAGCCGTTGGTGGCCGA+TGG | 0.546694 | 8.3:+36346303 | MS.gene71202:CDS |
| CAAGGAGGTGGATGAAAATG+TGG | 0.555366 | 8.3:+36346827 | MS.gene71202:CDS |
| ATCATGTTCGTTGCGTGAAG+AGG | 0.560526 | 8.3:+36346454 | MS.gene71202:CDS |
| CAATCGCTTCCGGCGCGTCG+AGG | 0.561052 | 8.3:-36346107 | None:intergenic |
| TGCATCCTCCACAAACTCTA+CGG | 0.564378 | 8.3:+36346027 | MS.gene71202:CDS |
| GAAAATGTGGGAAAGGGTCA+TGG | 0.564519 | 8.3:+36346840 | MS.gene71202:CDS |
| GGTGGATGAAAATGTGGGAA+AGG | 0.565772 | 8.3:+36346833 | MS.gene71202:CDS |
| GGAAAGGGTCATGGCGATGA+GGG | 0.569173 | 8.3:+36346849 | MS.gene71202:CDS |
| ACCAACGGCTTCGCTATCAC+CGG | 0.573245 | 8.3:-36346294 | None:intergenic |
| GATAAAGAGACTCTTTCTGA+TGG | 0.578931 | 8.3:+36346246 | MS.gene71202:CDS |
| TGTTTCTGAGGAGAAAGTGT+TGG | 0.587318 | 8.3:+36346491 | MS.gene71202:CDS |
| AATTCCGCGTGATGAAGCTA+GGG | 0.593077 | 8.3:-36345950 | None:intergenic |
| TCCGGTGATAGCGAAGCCGT+TGG | 0.594973 | 8.3:+36346293 | MS.gene71202:CDS |
| GGGAAAGGGTCATGGCGATG+AGG | 0.603201 | 8.3:+36346848 | MS.gene71202:CDS |
| TTTGGCGAATAGGGATAGTG+TGG | 0.627810 | 8.3:+36346554 | MS.gene71202:CDS |
| CCAATGGCTGAGAAGAAACA+CGG | 0.644142 | 8.3:+36345865 | None:intergenic |
| AATTCCTGCAAAACAATAGG+CGG | 0.644595 | 8.3:-36346387 | None:intergenic |
| AAGGAGGTGGATGAAAATGT+GGG | 0.648297 | 8.3:+36346828 | MS.gene71202:CDS |
| GCAGGAATTTGTGAATCATG+GGG | 0.648741 | 8.3:+36346401 | MS.gene71202:CDS |
| TTGTGGAGGATGCAATCGAA+CGG | 0.658727 | 8.3:-36346018 | None:intergenic |
| TCAGCTTATTCAACGCCCCG+TGG | 0.664928 | 8.3:-36346362 | None:intergenic |
| CAGGGTATGCTAAAATGCCG+GGG | 0.680216 | 8.3:+36346763 | MS.gene71202:CDS |
| TGTCGATTTAATGTGCAAGG+AGG | 0.690716 | 8.3:+36346812 | MS.gene71202:CDS |
| CAGGAATTTGTGAATCATGG+GGG | 0.692718 | 8.3:+36346402 | MS.gene71202:CDS |
| TCAACAATAAAAGCCTGAGG+CGG | 0.694025 | 8.3:-36346630 | None:intergenic |
| CGTCGCCGTAGAGTTTGTGG+AGG | 0.694812 | 8.3:-36346032 | None:intergenic |
| ATATCAACAATAAAAGCCTG+AGG | 0.711191 | 8.3:-36346633 | None:intergenic |
| TTAACCCTAGCTTCATCACG+CGG | 0.741697 | 8.3:+36345946 | MS.gene71202:CDS |
| CTAGGGTTAAGAGTGAGTCG+CGG | 0.746406 | 8.3:-36345933 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAGATAAATCTGTTA+AGG | + | chr8.3:36346896-36346915 | MS.gene71202:CDS | 20.0% |
| !! | TAATATCGATAATAAGATAC+CGG | - | chr8.3:36346734-36346753 | None:intergenic | 20.0% |
| ! | AGAAAAAGATAAATCTGTGA+AGG | + | chr8.3:36346995-36347014 | MS.gene71202:CDS | 25.0% |
| ! | ATCGATATTAATTACTTTCC+AGG | + | chr8.3:36346744-36346763 | MS.gene71202:CDS | 25.0% |
| ! | TCGATATTAATTACTTTCCA+GGG | + | chr8.3:36346745-36346764 | MS.gene71202:CDS | 25.0% |
| ! | TTTATTGTTGATATTGCTAG+TGG | + | chr8.3:36346642-36346661 | MS.gene71202:CDS | 25.0% |
| !! | GTTTTATAAGATGATGAGTT+TGG | + | chr8.3:36346590-36346609 | MS.gene71202:CDS | 25.0% |
| !!! | ATGAAACTGTTTTGTTTCTT+TGG | - | chr8.3:36345913-36345932 | None:intergenic | 25.0% |
| !!! | ATTTTTAAGGTGTATGTTGT+TGG | + | chr8.3:36346429-36346448 | MS.gene71202:CDS | 25.0% |
| ACAAATTCCTGCAAAACAAT+AGG | - | chr8.3:36346393-36346412 | None:intergenic | 30.0% | |
| ATATCAACAATAAAAGCCTG+AGG | - | chr8.3:36346636-36346655 | None:intergenic | 30.0% | |
| TCATAAATCACGATCTGTTT+CGG | - | chr8.3:36346228-36346247 | None:intergenic | 30.0% | |
| ! | GAATTTGAAATTGTTGAAGC+TGG | - | chr8.3:36346068-36346087 | None:intergenic | 30.0% |
| !!! | TTTTGTCGATTTAATGTGCA+AGG | + | chr8.3:36346809-36346828 | MS.gene71202:CDS | 30.0% |
| AATTCCTGCAAAACAATAGG+CGG | - | chr8.3:36346390-36346409 | None:intergenic | 35.0% | |
| CATAAATCACGATCTGTTTC+GGG | - | chr8.3:36346227-36346246 | None:intergenic | 35.0% | |
| GATAAAGAGACTCTTTCTGA+TGG | + | chr8.3:36346246-36346265 | MS.gene71202:CDS | 35.0% | |
| GTGATTCGTGATTCTAGATA+TGG | + | chr8.3:36346705-36346724 | MS.gene71202:CDS | 35.0% | |
| GTGATTCTAGATATGGTAAC+CGG | + | chr8.3:36346712-36346731 | MS.gene71202:CDS | 35.0% | |
| TAACCGAATTTCAATGCTTC+AGG | + | chr8.3:36346140-36346159 | MS.gene71202:CDS | 35.0% | |
| TGCAGGAATTTGTGAATCAT+GGG | + | chr8.3:36346400-36346419 | MS.gene71202:CDS | 35.0% | |
| TTGCAGGAATTTGTGAATCA+TGG | + | chr8.3:36346399-36346418 | MS.gene71202:CDS | 35.0% | |
| ! | TTGGGAGAGTTTAAAGTTTC+CGG | + | chr8.3:36346275-36346294 | MS.gene71202:CDS | 35.0% |
| !! | CAACCTGAAGCATTGAAATT+CGG | - | chr8.3:36346146-36346165 | None:intergenic | 35.0% |
| !! | TTGATATTGCTAGTGGATTG+AGG | + | chr8.3:36346649-36346668 | MS.gene71202:CDS | 35.0% |
| AACGGTCCTTGATCGATTAA+GGG | - | chr8.3:36346003-36346022 | None:intergenic | 40.0% | |
| AAGCGCGAAATCGCATAAAA+TGG | + | chr8.3:36346326-36346345 | MS.gene71202:CDS | 40.0% | |
| AAGGAGGTGGATGAAAATGT+GGG | + | chr8.3:36346828-36346847 | MS.gene71202:CDS | 40.0% | |
| ACCAAACCCTTAATCGATCA+AGG | + | chr8.3:36345994-36346013 | MS.gene71202:CDS | 40.0% | |
| CAGGAATTTGTGAATCATGG+GGG | + | chr8.3:36346402-36346421 | MS.gene71202:CDS | 40.0% | |
| CGATGAGGGTAAATCTGTTA+AGG | + | chr8.3:36346863-36346882 | MS.gene71202:CDS | 40.0% | |
| GCAGGAATTTGTGAATCATG+GGG | + | chr8.3:36346401-36346420 | MS.gene71202:CDS | 40.0% | |
| GTCAAAACTTTCTCATACCC+CGG | - | chr8.3:36346783-36346802 | None:intergenic | 40.0% | |
| GTGGATGAAAATGTGGGAAA+GGG | + | chr8.3:36346834-36346853 | MS.gene71202:CDS | 40.0% | |
| TCAACAATAAAAGCCTGAGG+CGG | - | chr8.3:36346633-36346652 | None:intergenic | 40.0% | |
| TCCTTGATCGATTAAGGGTT+TGG | - | chr8.3:36345998-36346017 | None:intergenic | 40.0% | |
| ! | AGGGTTTGGTTGAATCGATT+TGG | - | chr8.3:36345984-36346003 | None:intergenic | 40.0% |
| ! | GTCTTTACAGGATGTTTCTG+AGG | + | chr8.3:36346479-36346498 | MS.gene71202:CDS | 40.0% |
| ! | TGTTTCTGAGCTTAGGGTTA+GGG | + | chr8.3:36346164-36346183 | MS.gene71202:CDS | 40.0% |
| ! | TGTTTCTGAGGAGAAAGTGT+TGG | + | chr8.3:36346491-36346510 | MS.gene71202:CDS | 40.0% |
| !! | GTTTCTGAGGAGAAAGTGTT+GGG | + | chr8.3:36346492-36346511 | MS.gene71202:CDS | 40.0% |
| !! | TCAGGTTGTTTCTGAGCTTA+GGG | + | chr8.3:36346158-36346177 | MS.gene71202:CDS | 40.0% |
| !! | TCATGGGGGTGTGATTTTTA+AGG | + | chr8.3:36346416-36346435 | MS.gene71202:CDS | 40.0% |
| !! | TGTCGATTTAATGTGCAAGG+AGG | + | chr8.3:36346812-36346831 | MS.gene71202:CDS | 40.0% |
| !! | TTCAGGTTGTTTCTGAGCTT+AGG | + | chr8.3:36346157-36346176 | MS.gene71202:CDS | 40.0% |
| !! | TTGTTTCTGAGCTTAGGGTT+AGG | + | chr8.3:36346163-36346182 | MS.gene71202:CDS | 40.0% |
| AATTCCGCGTGATGAAGCTA+GGG | - | chr8.3:36345953-36345972 | None:intergenic | 45.0% | |
| AGAGACTCTTTCTGATGGTC+AGG | + | chr8.3:36346251-36346270 | MS.gene71202:CDS | 45.0% | |
| ATCATGTTCGTTGCGTGAAG+AGG | + | chr8.3:36346454-36346473 | MS.gene71202:CDS | 45.0% | |
| CAAGGAGGTGGATGAAAATG+TGG | + | chr8.3:36346827-36346846 | MS.gene71202:CDS | 45.0% | |
| CGATTTAATGTGCAAGGAGG+TGG | + | chr8.3:36346815-36346834 | MS.gene71202:CDS | 45.0% | |
| CGTCGAGGATAACAGCATTA+GGG | - | chr8.3:36346095-36346114 | None:intergenic | 45.0% | |
| CGTGAAGAGGAAGTCTTTAC+AGG | + | chr8.3:36346467-36346486 | MS.gene71202:CDS | 45.0% | |
| GAAAAAGGCGGCGAAACATT+CGG | + | chr8.3:36346198-36346217 | MS.gene71202:CDS | 45.0% | |
| GAAAATGTGGGAAAGGGTCA+TGG | + | chr8.3:36346840-36346859 | MS.gene71202:CDS | 45.0% | |
| GAACGGTCCTTGATCGATTA+AGG | - | chr8.3:36346004-36346023 | None:intergenic | 45.0% | |
| GAGAAGAAACACGGCGTAAT+AGG | + | chr8.3:36345874-36345893 | MS.gene71202:CDS | 45.0% | |
| GGTGGATGAAAATGTGGGAA+AGG | + | chr8.3:36346833-36346852 | MS.gene71202:CDS | 45.0% | |
| TAATTCCGCGTGATGAAGCT+AGG | - | chr8.3:36345954-36345973 | None:intergenic | 45.0% | |
| TCCAGGGTATGCTAAAATGC+CGG | + | chr8.3:36346761-36346780 | MS.gene71202:CDS | 45.0% | |
| TCTTTCTGATGGTCAGGCTT+GGG | + | chr8.3:36346257-36346276 | MS.gene71202:CDS | 45.0% | |
| TGCATCCTCCACAAACTCTA+CGG | + | chr8.3:36346027-36346046 | MS.gene71202:CDS | 45.0% | |
| TTAACCCTAGCTTCATCACG+CGG | + | chr8.3:36345946-36345965 | MS.gene71202:CDS | 45.0% | |
| TTGTGGAGGATGCAATCGAA+CGG | - | chr8.3:36346021-36346040 | None:intergenic | 45.0% | |
| TTTGGCGAATAGGGATAGTG+TGG | + | chr8.3:36346554-36346573 | MS.gene71202:CDS | 45.0% | |
| ! | GGTGTCGAATTTGGCGAATA+GGG | + | chr8.3:36346545-36346564 | MS.gene71202:CDS | 45.0% |
| !! | AGGGTTGGGGTTGATGAAAA+AGG | + | chr8.3:36346183-36346202 | MS.gene71202:CDS | 45.0% |
| !! | AGGTGTCGAATTTGGCGAAT+AGG | + | chr8.3:36346544-36346563 | MS.gene71202:CDS | 45.0% |
| !! | GAAACCGCCTATTGTTTTGC+AGG | + | chr8.3:36346383-36346402 | MS.gene71202:CDS | 45.0% |
| !! | GGAGAAAGTGTTGGGTGTTT+CGG | + | chr8.3:36346500-36346519 | MS.gene71202:CDS | 45.0% |
| !! | GTTGGGGTTGATGAAAAAGG+CGG | + | chr8.3:36346186-36346205 | MS.gene71202:CDS | 45.0% |
| !!! | ATGGCGCTTGTTTTTAGCCA+CGG | + | chr8.3:36346345-36346364 | MS.gene71202:CDS | 45.0% |
| !!! | GGATTTGTTGTCGTTTTCGC+AGG | + | chr8.3:36346524-36346543 | MS.gene71202:CDS | 45.0% |
| !!! | GTTTTCGCAGGTGTCGAATT+TGG | + | chr8.3:36346536-36346555 | MS.gene71202:CDS | 45.0% |
| AATCGTCGCCGTAGAGTTTG+TGG | - | chr8.3:36346038-36346057 | None:intergenic | 50.0% | |
| ACAAACTCTACGGCGACGAT+TGG | + | chr8.3:36346037-36346056 | MS.gene71202:CDS | 50.0% | |
| ATGCGATTTCGCGCTTCCAT+CGG | - | chr8.3:36346322-36346341 | None:intergenic | 50.0% | |
| CAGGGTATGCTAAAATGCCG+GGG | + | chr8.3:36346763-36346782 | MS.gene71202:CDS | 50.0% | |
| CCAGGGTATGCTAAAATGCC+GGG | + | chr8.3:36346762-36346781 | MS.gene71202:CDS | 50.0% | |
| CTAGGGTTAAGAGTGAGTCG+CGG | - | chr8.3:36345936-36345955 | None:intergenic | 50.0% | |
| CTCTTTCTGATGGTCAGGCT+TGG | + | chr8.3:36346256-36346275 | MS.gene71202:CDS | 50.0% | |
| CTGAGCTTAGGGTTAGGGTT+GGG | + | chr8.3:36346169-36346188 | MS.gene71202:CDS | 50.0% | |
| GCGTCGAGGATAACAGCATT+AGG | - | chr8.3:36346096-36346115 | None:intergenic | 50.0% | |
| TCTGAGCTTAGGGTTAGGGT+TGG | + | chr8.3:36346168-36346187 | MS.gene71202:CDS | 50.0% | |
| TGAAGACGCTCAATCGCTTC+CGG | - | chr8.3:36346120-36346139 | None:intergenic | 50.0% | |
| TGAGCTTAGGGTTAGGGTTG+GGG | + | chr8.3:36346170-36346189 | MS.gene71202:CDS | 50.0% | |
| !! | GAAAGTGTTGGGTGTTTCGG+AGG | + | chr8.3:36346503-36346522 | MS.gene71202:CDS | 50.0% |
| !!! | TGGCGCTTGTTTTTAGCCAC+GGG | + | chr8.3:36346346-36346365 | MS.gene71202:CDS | 50.0% |
| ACCAACGGCTTCGCTATCAC+CGG | - | chr8.3:36346297-36346316 | None:intergenic | 55.0% | |
| GGAAAGGGTCATGGCGATGA+GGG | + | chr8.3:36346849-36346868 | MS.gene71202:CDS | 55.0% | |
| TACTACTGAGATGCCGCCTC+AGG | + | chr8.3:36346617-36346636 | MS.gene71202:CDS | 55.0% | |
| TCAGCTTATTCAACGCCCCG+TGG | - | chr8.3:36346365-36346384 | None:intergenic | 55.0% | |
| !! | CCCGGCATTTTAGCATACCC+TGG | - | chr8.3:36346765-36346784 | None:intergenic | 55.0% |
| !!! | GGCGCTTGTTTTTAGCCACG+GGG | + | chr8.3:36346347-36346366 | MS.gene71202:CDS | 55.0% |
| CGTCGCCGTAGAGTTTGTGG+AGG | - | chr8.3:36346035-36346054 | None:intergenic | 60.0% | |
| GGGAAAGGGTCATGGCGATG+AGG | + | chr8.3:36346848-36346867 | MS.gene71202:CDS | 60.0% | |
| TGCTGTTATCCTCGACGCGC+CGG | + | chr8.3:36346098-36346117 | MS.gene71202:CDS | 60.0% | |
| ! | GGTGATAGCGAAGCCGTTGG+TGG | + | chr8.3:36346296-36346315 | MS.gene71202:CDS | 60.0% |
| ! | TCCGGTGATAGCGAAGCCGT+TGG | + | chr8.3:36346293-36346312 | MS.gene71202:CDS | 60.0% |
| GCGCTTCCATCGGCCACCAA+CGG | - | chr8.3:36346312-36346331 | None:intergenic | 65.0% | |
| CAATCGCTTCCGGCGCGTCG+AGG | - | chr8.3:36346110-36346129 | None:intergenic | 70.0% | |
| !! | GCGAAGCCGTTGGTGGCCGA+TGG | + | chr8.3:36346303-36346322 | MS.gene71202:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 36345868 | 36347022 | 36345868 | ID=MS.gene71202 |
| chr8.3 | mRNA | 36345868 | 36347022 | 36345868 | ID=MS.gene71202.t1;Parent=MS.gene71202 |
| chr8.3 | exon | 36345868 | 36347022 | 36345868 | ID=MS.gene71202.t1.exon1;Parent=MS.gene71202.t1 |
| chr8.3 | CDS | 36345868 | 36347022 | 36345868 | ID=cds.MS.gene71202.t1;Parent=MS.gene71202.t1 |
| Gene Sequence |
| Protein sequence |
