Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71393.t1 | XP_003611789.1 | 91 | 344 | 13 | 1 | 1 | 344 | 1 | 326 | 3.10E-175 | 624.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71393.t1 | Q9FX85 | 59.9 | 317 | 106 | 3 | 27 | 340 | 48 | 346 | 5.4e-99 | 362.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71393.t1 | G7K822 | 91.0 | 344 | 13 | 1 | 1 | 344 | 1 | 326 | 2.3e-175 | 624.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene71393 | 0.816504 | 5.34E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene71393 | 0.817835 | 2.68E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene71393 | 0.807853 | 4.13E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene71393 | 0.807714 | 4.42E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene71393 | 0.830958 | 2.19E-55 | -1.69E-46 |
| MS.gene053406 | MS.gene71393 | 0.806403 | 8.37E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene71393 | 0.808422 | 3.12E-50 | -1.69E-46 |
| MS.gene055240 | MS.gene71393 | 0.834266 | 3.31E-56 | -1.69E-46 |
| MS.gene056224 | MS.gene71393 | 0.80604 | 9.98E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene71393 | 0.80342 | 3.52E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene71393 | 0.800892 | 1.16E-48 | -1.69E-46 |
| MS.gene056748 | MS.gene71393 | 0.821383 | 4.16E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene71393 | 0.806526 | 7.88E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene71393 | 0.81998 | 8.73E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene71393 | 0.804015 | 2.65E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene71393 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene71393 | 0.824291 | 8.74E-54 | -1.69E-46 |
| MS.gene060405 | MS.gene71393 | 0.80939 | 1.94E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71393 | MS.gene026111 | PPI |
| MS.gene018002 | MS.gene71393 | PPI |
| MS.gene40613 | MS.gene71393 | PPI |
| MS.gene051232 | MS.gene71393 | PPI |
| MS.gene71393 | MS.gene034512 | PPI |
| MS.gene52672 | MS.gene71393 | PPI |
| MS.gene04636 | MS.gene71393 | PPI |
| MS.gene24862 | MS.gene71393 | PPI |
| MS.gene37256 | MS.gene71393 | PPI |
| MS.gene025145 | MS.gene71393 | PPI |
| MS.gene71393 | MS.gene85778 | PPI |
| MS.gene012254 | MS.gene71393 | PPI |
| MS.gene055984 | MS.gene71393 | PPI |
| MS.gene051844 | MS.gene71393 | PPI |
| MS.gene71393 | MS.gene012253 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71393.t1 | MTR_5g017860 | 90.988 | 344 | 13 | 1 | 1 | 344 | 1 | 326 | 0.0 | 635 |
| MS.gene71393.t1 | MTR_5g017850 | 88.663 | 344 | 21 | 1 | 1 | 344 | 1 | 326 | 0.0 | 624 |
| MS.gene71393.t1 | MTR_1g054205 | 48.406 | 345 | 154 | 6 | 4 | 344 | 2 | 326 | 6.91e-103 | 306 |
| MS.gene71393.t1 | MTR_4g125940 | 49.267 | 341 | 144 | 6 | 9 | 344 | 13 | 329 | 1.70e-102 | 305 |
| MS.gene71393.t1 | MTR_2g084080 | 48.665 | 337 | 146 | 4 | 9 | 344 | 7 | 317 | 1.84e-102 | 304 |
| MS.gene71393.t1 | MTR_3g094650 | 49.263 | 339 | 142 | 5 | 11 | 344 | 9 | 322 | 2.00e-102 | 304 |
| MS.gene71393.t1 | MTR_7g093370 | 48.256 | 344 | 155 | 5 | 5 | 344 | 47 | 371 | 2.85e-102 | 306 |
| MS.gene71393.t1 | MTR_2g084110 | 49.249 | 333 | 139 | 5 | 16 | 344 | 11 | 317 | 1.75e-101 | 301 |
| MS.gene71393.t1 | MTR_2g084010 | 50.299 | 334 | 135 | 6 | 16 | 344 | 11 | 318 | 1.85e-100 | 299 |
| MS.gene71393.t1 | MTR_5g074970 | 46.939 | 343 | 153 | 4 | 6 | 344 | 9 | 326 | 3.37e-100 | 299 |
| MS.gene71393.t1 | MTR_2g084020 | 49.701 | 334 | 137 | 6 | 16 | 344 | 11 | 318 | 4.24e-100 | 298 |
| MS.gene71393.t1 | MTR_2g029815 | 48.916 | 323 | 143 | 4 | 25 | 344 | 27 | 330 | 4.39e-100 | 299 |
| MS.gene71393.t1 | MTR_7g072480 | 47.353 | 340 | 149 | 5 | 6 | 344 | 6 | 316 | 1.40e-99 | 297 |
| MS.gene71393.t1 | MTR_2g029820 | 47.988 | 323 | 146 | 4 | 25 | 344 | 27 | 330 | 8.32e-98 | 294 |
| MS.gene71393.t1 | MTR_2g029830 | 47.678 | 323 | 147 | 4 | 25 | 344 | 26 | 329 | 1.01e-97 | 293 |
| MS.gene71393.t1 | MTR_4g083710 | 45.690 | 348 | 161 | 6 | 1 | 344 | 1 | 324 | 2.92e-97 | 291 |
| MS.gene71393.t1 | MTR_2g029560 | 46.221 | 344 | 163 | 4 | 4 | 344 | 1 | 325 | 8.67e-97 | 291 |
| MS.gene71393.t1 | MTR_2g040000 | 48.438 | 320 | 138 | 5 | 31 | 344 | 33 | 331 | 1.81e-96 | 290 |
| MS.gene71393.t1 | MTR_2g029800 | 47.678 | 323 | 147 | 4 | 25 | 344 | 27 | 330 | 2.66e-96 | 290 |
| MS.gene71393.t1 | MTR_5g083860 | 45.376 | 346 | 160 | 5 | 3 | 344 | 5 | 325 | 4.72e-96 | 288 |
| MS.gene71393.t1 | MTR_2g084090 | 46.588 | 337 | 151 | 4 | 12 | 344 | 7 | 318 | 5.88e-96 | 288 |
| MS.gene71393.t1 | MTR_2g029730 | 47.478 | 337 | 154 | 5 | 11 | 344 | 10 | 326 | 1.68e-95 | 287 |
| MS.gene71393.t1 | MTR_2g084000 | 46.903 | 339 | 148 | 6 | 12 | 344 | 7 | 319 | 2.05e-95 | 286 |
| MS.gene71393.t1 | MTR_7g072510 | 46.176 | 340 | 153 | 5 | 6 | 344 | 2 | 312 | 2.70e-95 | 286 |
| MS.gene71393.t1 | MTR_5g021060 | 48.750 | 320 | 143 | 4 | 27 | 344 | 30 | 330 | 1.14e-94 | 285 |
| MS.gene71393.t1 | MTR_3g072190 | 45.588 | 340 | 154 | 5 | 10 | 344 | 5 | 318 | 6.87e-94 | 282 |
| MS.gene71393.t1 | MTR_3g094670 | 46.628 | 341 | 155 | 4 | 6 | 344 | 7 | 322 | 1.47e-93 | 281 |
| MS.gene71393.t1 | MTR_8g076820 | 46.847 | 333 | 154 | 5 | 14 | 344 | 19 | 330 | 5.73e-93 | 280 |
| MS.gene71393.t1 | MTR_2g029910 | 45.511 | 323 | 155 | 3 | 25 | 344 | 28 | 332 | 7.52e-93 | 281 |
| MS.gene71393.t1 | MTR_4g074995 | 45.536 | 336 | 144 | 6 | 12 | 344 | 9 | 308 | 7.61e-93 | 279 |
| MS.gene71393.t1 | MTR_2g029860 | 45.401 | 337 | 158 | 5 | 15 | 344 | 13 | 330 | 3.59e-92 | 279 |
| MS.gene71393.t1 | MTR_3g466200 | 43.860 | 342 | 164 | 4 | 6 | 344 | 4 | 320 | 4.04e-92 | 278 |
| MS.gene71393.t1 | MTR_2g028980 | 44.957 | 347 | 165 | 6 | 5 | 344 | 3 | 330 | 4.54e-92 | 279 |
| MS.gene71393.t1 | MTR_4g029170 | 43.804 | 347 | 163 | 6 | 4 | 344 | 1 | 321 | 9.94e-92 | 277 |
| MS.gene71393.t1 | MTR_2g029850 | 46.749 | 323 | 150 | 4 | 25 | 344 | 27 | 330 | 1.57e-91 | 278 |
| MS.gene71393.t1 | MTR_4g029180 | 45.912 | 318 | 143 | 5 | 30 | 344 | 30 | 321 | 2.76e-91 | 276 |
| MS.gene71393.t1 | MTR_4g125940 | 50.680 | 294 | 119 | 5 | 56 | 344 | 2 | 274 | 1.23e-90 | 273 |
| MS.gene71393.t1 | MTR_2g029750 | 46.749 | 323 | 150 | 4 | 25 | 344 | 27 | 330 | 2.66e-90 | 275 |
| MS.gene71393.t1 | MTR_3g094630 | 45.748 | 341 | 158 | 4 | 6 | 344 | 7 | 322 | 1.51e-89 | 271 |
| MS.gene71393.t1 | MTR_1g115900 | 42.899 | 338 | 160 | 6 | 14 | 344 | 10 | 321 | 1.91e-89 | 271 |
| MS.gene71393.t1 | MTR_2g029740 | 45.511 | 323 | 154 | 4 | 25 | 344 | 27 | 330 | 9.70e-89 | 270 |
| MS.gene71393.t1 | MTR_4g029200 | 46.106 | 321 | 146 | 4 | 25 | 344 | 44 | 338 | 1.67e-88 | 269 |
| MS.gene71393.t1 | MTR_2g088770 | 42.857 | 336 | 168 | 6 | 11 | 344 | 12 | 325 | 3.25e-88 | 268 |
| MS.gene71393.t1 | MTR_4g122640 | 46.584 | 322 | 149 | 5 | 25 | 344 | 36 | 336 | 4.45e-88 | 268 |
| MS.gene71393.t1 | MTR_4g046713 | 42.090 | 335 | 174 | 3 | 11 | 344 | 11 | 326 | 5.66e-88 | 268 |
| MS.gene71393.t1 | MTR_1g022970 | 48.265 | 317 | 142 | 4 | 31 | 344 | 50 | 347 | 1.94e-87 | 267 |
| MS.gene71393.t1 | MTR_4g074990 | 43.402 | 341 | 151 | 6 | 7 | 344 | 4 | 305 | 1.28e-86 | 263 |
| MS.gene71393.t1 | MTR_3g466180 | 45.562 | 338 | 157 | 4 | 8 | 344 | 12 | 323 | 3.62e-86 | 263 |
| MS.gene71393.t1 | MTR_4g029190 | 45.289 | 329 | 152 | 5 | 19 | 344 | 37 | 340 | 1.43e-85 | 262 |
| MS.gene71393.t1 | MTR_2g029830 | 50.385 | 260 | 125 | 3 | 88 | 344 | 3 | 261 | 2.25e-83 | 254 |
| MS.gene71393.t1 | MTR_5g074740 | 45.906 | 342 | 150 | 11 | 9 | 344 | 9 | 321 | 2.50e-83 | 256 |
| MS.gene71393.t1 | MTR_5g074760 | 45.614 | 342 | 151 | 11 | 9 | 344 | 9 | 321 | 3.81e-83 | 255 |
| MS.gene71393.t1 | MTR_5g074860 | 44.160 | 351 | 161 | 9 | 1 | 343 | 1 | 324 | 1.22e-82 | 254 |
| MS.gene71393.t1 | MTR_5g074710 | 46.041 | 341 | 149 | 12 | 10 | 344 | 10 | 321 | 3.05e-82 | 253 |
| MS.gene71393.t1 | MTR_7g026990 | 45.079 | 315 | 145 | 5 | 31 | 344 | 35 | 322 | 5.47e-82 | 252 |
| MS.gene71393.t1 | MTR_5g049280 | 42.769 | 325 | 161 | 6 | 26 | 344 | 32 | 337 | 6.92e-82 | 252 |
| MS.gene71393.t1 | MTR_5g014100 | 44.037 | 327 | 153 | 6 | 27 | 344 | 26 | 331 | 1.30e-81 | 251 |
| MS.gene71393.t1 | MTR_2g008710 | 42.529 | 348 | 173 | 5 | 1 | 344 | 1 | 325 | 5.08e-81 | 249 |
| MS.gene71393.t1 | MTR_1g101830 | 38.081 | 344 | 191 | 4 | 1 | 344 | 1 | 322 | 2.09e-79 | 245 |
| MS.gene71393.t1 | MTR_4g030890 | 43.302 | 321 | 159 | 5 | 25 | 344 | 98 | 396 | 5.07e-79 | 248 |
| MS.gene71393.t1 | MTR_7g107520 | 43.155 | 336 | 163 | 8 | 11 | 344 | 11 | 320 | 3.70e-78 | 242 |
| MS.gene71393.t1 | MTR_4g133800 | 40.764 | 314 | 159 | 5 | 32 | 344 | 46 | 333 | 6.15e-78 | 242 |
| MS.gene71393.t1 | MTR_3g072190 | 48.649 | 259 | 124 | 3 | 87 | 344 | 1 | 251 | 1.35e-77 | 238 |
| MS.gene71393.t1 | MTR_3g092990 | 40.000 | 335 | 182 | 2 | 11 | 344 | 10 | 326 | 1.44e-77 | 241 |
| MS.gene71393.t1 | MTR_0155s0040 | 40.312 | 320 | 162 | 5 | 25 | 344 | 25 | 315 | 3.78e-77 | 239 |
| MS.gene71393.t1 | MTR_1g077000 | 37.931 | 348 | 179 | 6 | 5 | 344 | 9 | 327 | 1.12e-76 | 239 |
| MS.gene71393.t1 | MTR_5g022870 | 40.533 | 338 | 175 | 6 | 9 | 344 | 3 | 316 | 2.35e-76 | 238 |
| MS.gene71393.t1 | MTR_4g114210 | 41.018 | 334 | 169 | 5 | 16 | 344 | 10 | 320 | 4.91e-76 | 237 |
| MS.gene71393.t1 | MTR_8g075100 | 40.938 | 320 | 161 | 6 | 27 | 344 | 26 | 319 | 7.34e-76 | 236 |
| MS.gene71393.t1 | MTR_2g437770 | 40.752 | 319 | 161 | 5 | 27 | 344 | 50 | 341 | 1.02e-75 | 237 |
| MS.gene71393.t1 | MTR_4g074980 | 42.059 | 340 | 146 | 9 | 7 | 344 | 4 | 294 | 1.52e-75 | 234 |
| MS.gene71393.t1 | MTR_1g025980 | 41.493 | 335 | 172 | 5 | 9 | 343 | 7 | 317 | 1.58e-75 | 235 |
| MS.gene71393.t1 | MTR_4g031140 | 39.169 | 337 | 182 | 5 | 9 | 344 | 10 | 324 | 9.24e-75 | 234 |
| MS.gene71393.t1 | MTR_6g043280 | 41.284 | 327 | 160 | 6 | 21 | 344 | 35 | 332 | 1.25e-74 | 234 |
| MS.gene71393.t1 | MTR_4g074980 | 45.255 | 274 | 122 | 6 | 7 | 276 | 4 | 253 | 1.55e-73 | 228 |
| MS.gene71393.t1 | MTR_6g027440 | 39.583 | 336 | 179 | 6 | 9 | 344 | 3 | 314 | 3.63e-73 | 229 |
| MS.gene71393.t1 | MTR_7g086820 | 39.815 | 324 | 170 | 5 | 21 | 344 | 14 | 312 | 2.08e-72 | 227 |
| MS.gene71393.t1 | MTR_3g467600 | 41.570 | 344 | 169 | 8 | 7 | 344 | 7 | 324 | 8.20e-72 | 226 |
| MS.gene71393.t1 | MTR_1g086320 | 38.000 | 350 | 191 | 5 | 1 | 344 | 4 | 333 | 4.07e-71 | 224 |
| MS.gene71393.t1 | MTR_1g009750 | 38.053 | 339 | 186 | 5 | 10 | 344 | 10 | 328 | 2.08e-70 | 223 |
| MS.gene71393.t1 | MTR_6g043240 | 40.798 | 326 | 161 | 6 | 21 | 344 | 36 | 331 | 2.03e-69 | 221 |
| MS.gene71393.t1 | MTR_1g038680 | 40.062 | 322 | 163 | 6 | 31 | 344 | 33 | 332 | 5.88e-69 | 219 |
| MS.gene71393.t1 | MTR_1g086490 | 37.079 | 356 | 193 | 5 | 1 | 344 | 4 | 340 | 2.09e-68 | 218 |
| MS.gene71393.t1 | MTR_2g008160 | 39.077 | 325 | 170 | 6 | 25 | 344 | 22 | 323 | 4.64e-68 | 216 |
| MS.gene71393.t1 | MTR_1g090760 | 37.427 | 342 | 189 | 7 | 9 | 344 | 8 | 330 | 1.49e-67 | 215 |
| MS.gene71393.t1 | MTR_3g092990 | 37.910 | 335 | 178 | 2 | 11 | 344 | 10 | 315 | 1.96e-67 | 214 |
| MS.gene71393.t1 | MTR_7g029030 | 37.963 | 324 | 169 | 6 | 26 | 344 | 24 | 320 | 3.06e-66 | 212 |
| MS.gene71393.t1 | MTR_7g086870 | 38.679 | 318 | 167 | 5 | 27 | 344 | 22 | 311 | 1.83e-65 | 209 |
| MS.gene71393.t1 | MTR_6g043460 | 39.877 | 326 | 167 | 6 | 21 | 344 | 30 | 328 | 5.23e-65 | 209 |
| MS.gene71393.t1 | MTR_4g087965 | 35.754 | 358 | 191 | 7 | 4 | 340 | 3 | 342 | 9.93e-65 | 209 |
| MS.gene71393.t1 | MTR_2g008730 | 38.682 | 349 | 161 | 6 | 1 | 344 | 1 | 301 | 1.11e-64 | 207 |
| MS.gene71393.t1 | MTR_5g074860 | 40.341 | 352 | 134 | 11 | 1 | 343 | 1 | 285 | 8.57e-64 | 204 |
| MS.gene71393.t1 | MTR_2g067440 | 36.103 | 349 | 173 | 8 | 25 | 343 | 58 | 386 | 3.20e-62 | 203 |
| MS.gene71393.t1 | MTR_2g099175 | 38.080 | 323 | 174 | 6 | 26 | 344 | 35 | 335 | 2.01e-60 | 197 |
| MS.gene71393.t1 | MTR_5g016010 | 34.111 | 343 | 196 | 7 | 11 | 343 | 6 | 328 | 8.68e-60 | 195 |
| MS.gene71393.t1 | MTR_4g127670 | 38.154 | 325 | 171 | 8 | 26 | 344 | 23 | 323 | 1.32e-59 | 194 |
| MS.gene71393.t1 | MTR_3g105790 | 37.209 | 344 | 188 | 7 | 5 | 344 | 3 | 322 | 2.75e-59 | 194 |
| MS.gene71393.t1 | MTR_8g062780 | 34.320 | 338 | 200 | 5 | 10 | 344 | 6 | 324 | 4.69e-59 | 193 |
| MS.gene71393.t1 | MTR_1g009750 | 34.808 | 339 | 180 | 6 | 10 | 344 | 10 | 311 | 1.49e-58 | 191 |
| MS.gene71393.t1 | MTR_2g078610 | 35.345 | 348 | 174 | 7 | 25 | 340 | 74 | 402 | 1.67e-58 | 194 |
| MS.gene71393.t1 | MTR_2g077990 | 35.920 | 348 | 172 | 7 | 25 | 340 | 74 | 402 | 1.67e-58 | 194 |
| MS.gene71393.t1 | MTR_4g095450 | 36.202 | 337 | 181 | 9 | 10 | 340 | 12 | 320 | 6.49e-56 | 185 |
| MS.gene71393.t1 | MTR_0286s0010 | 33.432 | 338 | 202 | 5 | 10 | 344 | 17 | 334 | 1.12e-54 | 182 |
| MS.gene71393.t1 | MTR_6g008075 | 33.432 | 338 | 202 | 5 | 10 | 344 | 17 | 334 | 1.12e-54 | 182 |
| MS.gene71393.t1 | MTR_5g033470 | 33.837 | 331 | 184 | 7 | 25 | 344 | 71 | 377 | 1.30e-53 | 181 |
| MS.gene71393.t1 | MTR_4g132490 | 33.851 | 322 | 188 | 6 | 26 | 344 | 28 | 327 | 3.54e-53 | 178 |
| MS.gene71393.t1 | MTR_2g078280 | 35.207 | 338 | 168 | 7 | 25 | 330 | 74 | 392 | 6.81e-53 | 179 |
| MS.gene71393.t1 | MTR_0147s0010 | 33.234 | 337 | 173 | 5 | 27 | 343 | 77 | 381 | 3.08e-52 | 177 |
| MS.gene71393.t1 | MTR_2g008160 | 34.769 | 325 | 149 | 6 | 25 | 344 | 22 | 288 | 3.53e-52 | 174 |
| MS.gene71393.t1 | MTR_2g067450 | 34.557 | 327 | 180 | 9 | 25 | 343 | 9 | 309 | 3.89e-48 | 164 |
| MS.gene71393.t1 | MTR_7g072490 | 42.128 | 235 | 73 | 3 | 91 | 324 | 2 | 174 | 1.34e-46 | 157 |
| MS.gene71393.t1 | MTR_5g074700 | 42.424 | 231 | 108 | 8 | 118 | 344 | 5 | 214 | 4.01e-45 | 154 |
| MS.gene71393.t1 | MTR_2g008160 | 42.703 | 185 | 85 | 3 | 25 | 209 | 22 | 185 | 2.60e-44 | 151 |
| MS.gene71393.t1 | MTR_1g066710 | 30.650 | 323 | 197 | 5 | 25 | 344 | 25 | 323 | 2.68e-43 | 152 |
| MS.gene71393.t1 | MTR_3g105790 | 42.194 | 237 | 131 | 5 | 112 | 344 | 12 | 246 | 3.66e-42 | 147 |
| MS.gene71393.t1 | MTR_4g132110 | 31.056 | 322 | 193 | 6 | 27 | 344 | 32 | 328 | 1.68e-41 | 148 |
| MS.gene71393.t1 | MTR_1g066380 | 30.341 | 323 | 198 | 5 | 25 | 344 | 25 | 323 | 3.13e-41 | 147 |
| MS.gene71393.t1 | MTR_1g066640 | 31.288 | 326 | 191 | 6 | 25 | 344 | 25 | 323 | 5.57e-41 | 146 |
| MS.gene71393.t1 | MTR_4g132110 | 30.887 | 327 | 192 | 7 | 27 | 344 | 32 | 333 | 3.81e-40 | 144 |
| MS.gene71393.t1 | MTR_1g066680 | 31.498 | 327 | 188 | 7 | 25 | 344 | 25 | 322 | 1.83e-39 | 142 |
| MS.gene71393.t1 | MTR_3g072210 | 42.408 | 191 | 99 | 5 | 157 | 344 | 56 | 238 | 3.13e-38 | 136 |
| MS.gene71393.t1 | MTR_2g029880 | 39.594 | 197 | 105 | 4 | 151 | 344 | 3 | 188 | 3.13e-37 | 133 |
| MS.gene71393.t1 | MTR_3g072260 | 49.618 | 131 | 48 | 1 | 26 | 156 | 25 | 137 | 1.49e-36 | 129 |
| MS.gene71393.t1 | MTR_1g066380 | 31.641 | 256 | 166 | 4 | 92 | 344 | 6 | 255 | 1.69e-33 | 124 |
| MS.gene71393.t1 | MTR_2g077980 | 33.096 | 281 | 139 | 10 | 107 | 344 | 11 | 285 | 3.54e-30 | 116 |
| MS.gene71393.t1 | MTR_2g078560 | 31.163 | 215 | 117 | 4 | 157 | 340 | 102 | 316 | 3.60e-25 | 103 |
| MS.gene71393.t1 | MTR_7g086790 | 33.862 | 189 | 103 | 5 | 92 | 280 | 17 | 183 | 1.23e-23 | 96.7 |
| MS.gene71393.t1 | MTR_5g058120 | 35.758 | 165 | 92 | 4 | 179 | 342 | 6 | 157 | 4.17e-22 | 94.0 |
| MS.gene71393.t1 | MTR_1g089005 | 41.007 | 139 | 66 | 3 | 16 | 151 | 1 | 126 | 1.14e-20 | 87.8 |
| MS.gene71393.t1 | MTR_3g462850 | 34.507 | 142 | 87 | 4 | 208 | 344 | 9 | 149 | 2.22e-18 | 81.3 |
| MS.gene71393.t1 | MTR_2g029930 | 42.453 | 106 | 37 | 3 | 25 | 127 | 17 | 101 | 8.95e-17 | 75.5 |
| MS.gene71393.t1 | MTR_4g114220 | 45.283 | 106 | 30 | 3 | 47 | 152 | 23 | 100 | 9.46e-17 | 76.6 |
| MS.gene71393.t1 | MTR_5g074770 | 47.253 | 91 | 45 | 2 | 255 | 343 | 19 | 108 | 3.60e-16 | 73.9 |
| MS.gene71393.t1 | MTR_7g107500 | 43.434 | 99 | 54 | 2 | 246 | 344 | 1 | 97 | 4.14e-16 | 73.2 |
| MS.gene71393.t1 | MTR_6g048160 | 49.425 | 87 | 22 | 3 | 66 | 152 | 22 | 86 | 1.04e-15 | 72.0 |
| MS.gene71393.t1 | MTR_1g098320 | 36.842 | 95 | 59 | 1 | 251 | 344 | 30 | 124 | 3.63e-14 | 69.3 |
| MS.gene71393.t1 | MTR_4g031040 | 32.184 | 174 | 72 | 5 | 106 | 278 | 3 | 131 | 5.00e-14 | 68.9 |
| MS.gene71393.t1 | MTR_7g086785 | 43.836 | 73 | 40 | 1 | 91 | 163 | 4 | 75 | 1.80e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71393.t1 | AT1G49570 | 59.502 | 321 | 109 | 3 | 23 | 340 | 44 | 346 | 3.42e-127 | 368 |
| MS.gene71393.t1 | AT5G19890 | 50.725 | 345 | 142 | 5 | 4 | 344 | 7 | 327 | 5.71e-110 | 324 |
| MS.gene71393.t1 | AT5G06730 | 51.703 | 323 | 134 | 4 | 25 | 344 | 31 | 334 | 2.07e-108 | 321 |
| MS.gene71393.t1 | AT5G06720 | 49.226 | 323 | 142 | 4 | 25 | 344 | 30 | 333 | 6.12e-101 | 301 |
| MS.gene71393.t1 | AT4G36430 | 46.106 | 321 | 152 | 4 | 26 | 344 | 29 | 330 | 1.70e-97 | 292 |
| MS.gene71393.t1 | AT2G18150 | 43.678 | 348 | 164 | 5 | 10 | 344 | 8 | 336 | 3.32e-96 | 289 |
| MS.gene71393.t1 | AT2G38390 | 47.006 | 334 | 154 | 5 | 15 | 344 | 19 | 333 | 5.09e-96 | 289 |
| MS.gene71393.t1 | AT5G05340 | 44.615 | 325 | 153 | 4 | 22 | 344 | 25 | 324 | 6.30e-93 | 280 |
| MS.gene71393.t1 | AT2G18140 | 45.625 | 320 | 153 | 4 | 27 | 344 | 35 | 335 | 2.79e-92 | 279 |
| MS.gene71393.t1 | AT1G44970 | 48.297 | 323 | 145 | 4 | 25 | 344 | 43 | 346 | 1.05e-91 | 278 |
| MS.gene71393.t1 | AT2G38380 | 45.858 | 338 | 160 | 5 | 11 | 344 | 15 | 333 | 6.12e-90 | 273 |
| MS.gene71393.t1 | AT3G32980 | 43.931 | 346 | 170 | 5 | 4 | 344 | 8 | 334 | 3.31e-89 | 271 |
| MS.gene71393.t1 | AT1G14550 | 43.068 | 339 | 164 | 6 | 10 | 344 | 8 | 321 | 9.83e-89 | 269 |
| MS.gene71393.t1 | AT5G19880 | 44.928 | 345 | 165 | 6 | 6 | 344 | 4 | 329 | 1.27e-88 | 269 |
| MS.gene71393.t1 | AT3G49120 | 43.695 | 341 | 168 | 5 | 9 | 344 | 14 | 335 | 3.99e-88 | 269 |
| MS.gene71393.t1 | AT1G14540 | 44.012 | 334 | 157 | 6 | 16 | 344 | 7 | 315 | 9.43e-87 | 264 |
| MS.gene71393.t1 | AT4G08780 | 45.015 | 331 | 152 | 6 | 22 | 344 | 19 | 327 | 3.83e-86 | 263 |
| MS.gene71393.t1 | AT3G49110 | 43.895 | 344 | 163 | 6 | 9 | 344 | 15 | 336 | 5.28e-86 | 263 |
| MS.gene71393.t1 | AT3G50990 | 43.988 | 341 | 167 | 5 | 9 | 344 | 20 | 341 | 2.79e-85 | 261 |
| MS.gene71393.t1 | AT1G68850 | 41.935 | 341 | 172 | 7 | 11 | 344 | 14 | 335 | 5.19e-85 | 260 |
| MS.gene71393.t1 | AT5G58400 | 42.286 | 350 | 171 | 5 | 1 | 344 | 1 | 325 | 9.56e-85 | 259 |
| MS.gene71393.t1 | AT5G15180 | 43.695 | 341 | 164 | 8 | 10 | 344 | 11 | 329 | 1.08e-84 | 259 |
| MS.gene71393.t1 | AT4G08770 | 45.317 | 331 | 151 | 6 | 22 | 344 | 19 | 327 | 1.15e-84 | 260 |
| MS.gene71393.t1 | AT3G03670 | 42.773 | 339 | 167 | 6 | 10 | 344 | 6 | 321 | 2.58e-84 | 258 |
| MS.gene71393.t1 | AT5G66390 | 41.834 | 349 | 174 | 6 | 6 | 344 | 4 | 333 | 3.49e-84 | 258 |
| MS.gene71393.t1 | AT3G01190 | 44.152 | 342 | 166 | 7 | 5 | 344 | 3 | 321 | 5.05e-84 | 257 |
| MS.gene71393.t1 | AT4G16270 | 45.312 | 320 | 152 | 5 | 27 | 344 | 50 | 348 | 1.66e-83 | 257 |
| MS.gene71393.t1 | AT5G58390 | 43.917 | 337 | 161 | 4 | 11 | 344 | 5 | 316 | 1.85e-83 | 256 |
| MS.gene71393.t1 | AT1G05260 | 41.499 | 347 | 178 | 8 | 1 | 344 | 1 | 325 | 2.72e-83 | 256 |
| MS.gene71393.t1 | AT3G21770 | 42.138 | 318 | 162 | 5 | 25 | 340 | 27 | 324 | 5.47e-80 | 247 |
| MS.gene71393.t1 | AT2G35380 | 41.226 | 359 | 167 | 7 | 4 | 344 | 3 | 335 | 5.76e-80 | 248 |
| MS.gene71393.t1 | AT4G11290 | 41.304 | 322 | 169 | 3 | 25 | 344 | 23 | 326 | 1.59e-79 | 246 |
| MS.gene71393.t1 | AT5G17820 | 39.701 | 335 | 174 | 5 | 10 | 344 | 7 | 313 | 9.70e-79 | 243 |
| MS.gene71393.t1 | AT5G51890 | 38.393 | 336 | 186 | 3 | 9 | 344 | 8 | 322 | 1.64e-78 | 243 |
| MS.gene71393.t1 | AT5G64120 | 40.233 | 343 | 174 | 6 | 9 | 344 | 10 | 328 | 4.89e-78 | 242 |
| MS.gene71393.t1 | AT5G17820 | 39.701 | 335 | 174 | 5 | 10 | 344 | 60 | 366 | 2.41e-77 | 242 |
| MS.gene71393.t1 | AT2G22420 | 41.003 | 339 | 173 | 6 | 8 | 344 | 6 | 319 | 5.38e-77 | 239 |
| MS.gene71393.t1 | AT1G05240 | 41.195 | 318 | 161 | 7 | 27 | 340 | 26 | 321 | 3.64e-75 | 235 |
| MS.gene71393.t1 | AT1G05250 | 41.195 | 318 | 161 | 7 | 27 | 340 | 26 | 321 | 3.64e-75 | 235 |
| MS.gene71393.t1 | AT5G42180 | 39.286 | 336 | 181 | 4 | 8 | 343 | 4 | 316 | 1.66e-74 | 233 |
| MS.gene71393.t1 | AT4G33420 | 39.815 | 324 | 166 | 5 | 21 | 344 | 31 | 325 | 3.26e-74 | 232 |
| MS.gene71393.t1 | AT4G33420 | 39.815 | 324 | 166 | 5 | 21 | 344 | 78 | 372 | 1.53e-73 | 232 |
| MS.gene71393.t1 | AT2G41480 | 40.233 | 343 | 175 | 8 | 8 | 344 | 10 | 328 | 3.12e-73 | 230 |
| MS.gene71393.t1 | AT4G25980 | 38.462 | 325 | 173 | 5 | 25 | 344 | 24 | 326 | 4.55e-71 | 224 |
| MS.gene71393.t1 | AT5G39580 | 40.059 | 337 | 174 | 7 | 9 | 344 | 10 | 319 | 3.00e-70 | 222 |
| MS.gene71393.t1 | AT4G26010 | 38.988 | 336 | 167 | 8 | 12 | 344 | 9 | 309 | 4.93e-70 | 221 |
| MS.gene71393.t1 | AT4G26010 | 38.988 | 336 | 167 | 8 | 12 | 344 | 37 | 337 | 8.14e-70 | 221 |
| MS.gene71393.t1 | AT1G30870 | 40.187 | 321 | 163 | 6 | 27 | 344 | 51 | 345 | 3.93e-69 | 220 |
| MS.gene71393.t1 | AT4G33870 | 35.613 | 351 | 172 | 5 | 25 | 340 | 66 | 397 | 6.63e-68 | 219 |
| MS.gene71393.t1 | AT1G71695 | 37.730 | 326 | 173 | 6 | 23 | 344 | 40 | 339 | 2.92e-67 | 216 |
| MS.gene71393.t1 | AT2G24800 | 41.231 | 325 | 162 | 6 | 25 | 344 | 29 | 329 | 6.45e-67 | 214 |
| MS.gene71393.t1 | AT3G49960 | 37.791 | 344 | 185 | 8 | 9 | 344 | 7 | 329 | 1.61e-66 | 213 |
| MS.gene71393.t1 | AT2G18980 | 37.647 | 340 | 181 | 8 | 11 | 344 | 9 | 323 | 3.27e-66 | 212 |
| MS.gene71393.t1 | AT2G39040 | 40.184 | 326 | 168 | 8 | 26 | 344 | 45 | 350 | 4.03e-66 | 212 |
| MS.gene71393.t1 | AT4G37530 | 39.144 | 327 | 176 | 5 | 22 | 344 | 22 | 329 | 7.58e-66 | 211 |
| MS.gene71393.t1 | AT1G77100 | 37.500 | 344 | 179 | 9 | 9 | 344 | 4 | 319 | 2.16e-65 | 209 |
| MS.gene71393.t1 | AT5G64100 | 38.438 | 320 | 168 | 6 | 28 | 344 | 38 | 331 | 5.93e-65 | 209 |
| MS.gene71393.t1 | AT5G67400 | 37.846 | 325 | 177 | 6 | 25 | 344 | 25 | 329 | 4.05e-64 | 206 |
| MS.gene71393.t1 | AT4G31760 | 38.416 | 341 | 178 | 8 | 11 | 344 | 11 | 326 | 6.16e-64 | 206 |
| MS.gene71393.t1 | AT5G64110 | 38.801 | 317 | 167 | 7 | 31 | 344 | 38 | 330 | 1.12e-63 | 205 |
| MS.gene71393.t1 | AT5G47000 | 34.604 | 341 | 194 | 6 | 10 | 344 | 13 | 330 | 5.34e-63 | 204 |
| MS.gene71393.t1 | AT3G28200 | 36.810 | 326 | 172 | 5 | 25 | 344 | 19 | 316 | 1.13e-62 | 202 |
| MS.gene71393.t1 | AT5G24070 | 37.879 | 330 | 178 | 6 | 19 | 344 | 29 | 335 | 1.55e-62 | 203 |
| MS.gene71393.t1 | AT4G17690 | 37.072 | 321 | 175 | 5 | 27 | 344 | 26 | 322 | 1.96e-62 | 202 |
| MS.gene71393.t1 | AT4G37520 | 36.778 | 329 | 175 | 6 | 25 | 344 | 25 | 329 | 5.66e-62 | 201 |
| MS.gene71393.t1 | AT2G34060 | 34.930 | 355 | 195 | 7 | 4 | 341 | 8 | 343 | 2.43e-61 | 200 |
| MS.gene71393.t1 | AT5G14130 | 37.846 | 325 | 173 | 7 | 25 | 344 | 30 | 330 | 3.57e-61 | 199 |
| MS.gene71393.t1 | AT4G30170 | 36.280 | 328 | 178 | 8 | 23 | 344 | 23 | 325 | 7.33e-61 | 198 |
| MS.gene71393.t1 | AT5G14130 | 36.599 | 347 | 188 | 8 | 6 | 344 | 49 | 371 | 8.19e-61 | 199 |
| MS.gene71393.t1 | AT2G43480 | 37.695 | 321 | 172 | 7 | 28 | 344 | 39 | 335 | 5.73e-60 | 196 |
| MS.gene71393.t1 | AT4G37520 | 36.474 | 329 | 173 | 7 | 25 | 344 | 25 | 326 | 5.78e-60 | 196 |
| MS.gene71393.t1 | AT2G35380 | 43.254 | 252 | 121 | 5 | 107 | 344 | 4 | 247 | 2.95e-59 | 191 |
| MS.gene71393.t1 | AT1G34510 | 36.012 | 336 | 181 | 8 | 10 | 344 | 7 | 309 | 3.42e-58 | 191 |
| MS.gene71393.t1 | AT5G40150 | 34.969 | 326 | 179 | 5 | 25 | 344 | 30 | 328 | 7.57e-57 | 187 |
| MS.gene71393.t1 | AT5G22410 | 34.302 | 344 | 196 | 9 | 4 | 342 | 5 | 323 | 2.38e-55 | 184 |
| MS.gene71393.t1 | AT4G37530 | 39.427 | 279 | 146 | 5 | 22 | 296 | 22 | 281 | 8.97e-55 | 181 |
| MS.gene71393.t1 | AT1G24110 | 35.057 | 348 | 182 | 10 | 12 | 344 | 4 | 322 | 5.28e-51 | 172 |
| MS.gene71393.t1 | AT4G21960 | 32.298 | 322 | 189 | 6 | 27 | 344 | 31 | 327 | 2.15e-45 | 158 |
| MS.gene71393.t1 | AT2G37130 | 33.436 | 326 | 183 | 9 | 26 | 344 | 29 | 327 | 2.66e-44 | 155 |
| MS.gene71393.t1 | AT2G37130 | 33.540 | 322 | 180 | 9 | 30 | 344 | 2 | 296 | 5.61e-44 | 153 |
| MS.gene71393.t1 | AT4G25980 | 41.361 | 191 | 91 | 3 | 25 | 215 | 69 | 238 | 6.07e-43 | 150 |
| MS.gene71393.t1 | AT3G17070 | 31.677 | 322 | 196 | 7 | 27 | 344 | 38 | 339 | 7.97e-42 | 149 |
| MS.gene71393.t1 | AT5G39580 | 41.232 | 211 | 99 | 4 | 9 | 219 | 10 | 195 | 1.01e-41 | 145 |
| MS.gene71393.t1 | AT2G24800 | 41.361 | 191 | 87 | 4 | 25 | 213 | 29 | 196 | 2.21e-35 | 129 |
| MS.gene71393.t1 | AT3G17070 | 31.321 | 265 | 176 | 6 | 84 | 344 | 14 | 276 | 2.62e-32 | 122 |
Find 50 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAGAGTAGAGGGCCATTT+TGG | 0.168625 | 5.1:-10150854 | MS.gene71393:intron |
| TGCAGTTTCTGTTGAGAAAA+TGG | 0.175355 | 5.1:-10150148 | MS.gene71393:CDS |
| CCTCTTAATGAATTCTTATT+AGG | 0.231906 | 5.1:+10151119 | None:intergenic |
| GATGATTCAGACACACTAAA+AGG | 0.290985 | 5.1:-10151158 | MS.gene71393:CDS |
| TTAACTATTCTGTTCAGATT+TGG | 0.299173 | 5.1:+10151429 | None:intergenic |
| AGCTGTTTCGGACACCAATT+TGG | 0.311219 | 5.1:-10150337 | MS.gene71393:CDS |
| CAATCAGACCAAGCTCTATT+AGG | 0.312839 | 5.1:-10150237 | MS.gene71393:CDS |
| GTGTCCGAAACAGCTTGATT+TGG | 0.350241 | 5.1:+10150345 | None:intergenic |
| AGGATCCAATGGAGCCAAAT+TGG | 0.353753 | 5.1:+10150323 | None:intergenic |
| TGATGTTCTTACGGGACAAC+AGG | 0.360814 | 5.1:-10150118 | MS.gene71393:CDS |
| TGACAGCACAACTGCTTCAT+TGG | 0.363732 | 5.1:-10150214 | MS.gene71393:CDS |
| CCTAATAAGAATTCATTAAG+AGG | 0.373805 | 5.1:-10151119 | MS.gene71393:CDS |
| GGACACCAATTTGGCTCCAT+TGG | 0.385639 | 5.1:-10150328 | MS.gene71393:CDS |
| CCAAGAGGTACAGCCCAAAA+TGG | 0.386408 | 5.1:+10150840 | None:intergenic |
| CGGGACAACAGGGTCAAATA+AGG | 0.392480 | 5.1:-10150107 | MS.gene71393:CDS |
| TATGCAGGTGCACACACCTT+TGG | 0.410019 | 5.1:-10150477 | MS.gene71393:intron |
| ATGTCCAAATCAAGCTGTTT+CGG | 0.413591 | 5.1:-10150349 | MS.gene71393:CDS |
| CTATTCGACTTTGGTGGCTC+TGG | 0.414711 | 5.1:-10150423 | MS.gene71393:CDS |
| GGTCGCATTGATGTTCTTAC+GGG | 0.420596 | 5.1:-10150126 | MS.gene71393:CDS |
| AGCAGCAATCCTTGAGTCAT+TGG | 0.423951 | 5.1:+10151383 | None:intergenic |
| TCAGCACATGACACTGTGTT+AGG | 0.424517 | 5.1:+10151050 | None:intergenic |
| GGGTCGCATTGATGTTCTTA+CGG | 0.427573 | 5.1:-10150127 | MS.gene71393:CDS |
| TTACATTGACGAAACAATCA+TGG | 0.430670 | 5.1:+10151340 | None:intergenic |
| TACTTGATATACAGCATCTC+TGG | 0.434277 | 5.1:+10151010 | None:intergenic |
| GCAGTTTCTGTTGAGAAAAT+GGG | 0.438276 | 5.1:-10150147 | MS.gene71393:CDS |
| AAGACCTTTGGAAATGAACT+TGG | 0.454907 | 5.1:+10150737 | None:intergenic |
| ATGTGATGGATCTGTGCTAC+TGG | 0.464722 | 5.1:-10151180 | MS.gene71393:CDS |
| CGAAACAATCATGGAAATGA+AGG | 0.464987 | 5.1:+10151349 | None:intergenic |
| TCAAATGTGTTGCTTGTGAC+AGG | 0.470077 | 5.1:+10150303 | None:intergenic |
| AAACCAAGACTATTCGACTT+TGG | 0.476500 | 5.1:-10150432 | MS.gene71393:CDS |
| ATGATTCAGACACACTAAAA+GGG | 0.487747 | 5.1:-10151157 | MS.gene71393:CDS |
| TGCTGTCACCTAATAGAGCT+TGG | 0.491857 | 5.1:+10150229 | None:intergenic |
| TGAACCTCTAGAAAACATTA+CGG | 0.495557 | 5.1:-10150760 | MS.gene71393:CDS |
| GGTGTTACTTAGGGATGTGA+TGG | 0.495687 | 5.1:-10151194 | MS.gene71393:intron |
| CCAAGACTATTCGACTTTGG+TGG | 0.503120 | 5.1:-10150429 | MS.gene71393:CDS |
| CCACCAAAGTCGAATAGTCT+TGG | 0.511471 | 5.1:+10150429 | None:intergenic |
| AAGGATGTAGCAGTGCTCTC+AGG | 0.511701 | 5.1:-10150708 | MS.gene71393:intron |
| GTACCTCTTGGTCGTAGAGA+TGG | 0.545618 | 5.1:-10150828 | MS.gene71393:CDS |
| TCTAGAGGTTCAAAGGGTGA+TGG | 0.550333 | 5.1:+10150771 | None:intergenic |
| ACGGCCAAGTTCATTTCCAA+AGG | 0.572086 | 5.1:-10150741 | MS.gene71393:CDS |
| TGGTTAACTATTATAGCAAG+TGG | 0.574333 | 5.1:-10150194 | MS.gene71393:CDS |
| TAGAGTTGAGAGCACACAAG+TGG | 0.587545 | 5.1:+10151477 | None:intergenic |
| CAGCTATAGCCAATGACTCA+AGG | 0.590497 | 5.1:-10151392 | MS.gene71393:CDS |
| TTGCTTGTGACAGGATCCAA+TGG | 0.612319 | 5.1:+10150312 | None:intergenic |
| TGATTCAGACACACTAAAAG+GGG | 0.629420 | 5.1:-10151156 | MS.gene71393:CDS |
| ATTTGCGTCGCTCTCACTCG+CGG | 0.635311 | 5.1:+10150800 | None:intergenic |
| AGAAGTGATGAATCAAGTGA+TGG | 0.657845 | 5.1:+10150390 | None:intergenic |
| GATGTTCTTACGGGACAACA+GGG | 0.658146 | 5.1:-10150117 | MS.gene71393:CDS |
| AAAGCATTGAGCAAAGCCAA+AGG | 0.681054 | 5.1:+10150461 | None:intergenic |
| GTGCCATCTCTACGACCAAG+AGG | 0.689151 | 5.1:+10150825 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATAAAATAATTGTGA+AGG | + | chr5.1:10150945-10150964 | None:intergenic | 15.0% |
| !!! | AATTTTAAGTAACAATATGT+TGG | + | chr5.1:10150729-10150748 | None:intergenic | 15.0% |
| !!! | GTTAATTTCTTATTTCATTT+TGG | - | chr5.1:10150405-10150424 | MS.gene71393:CDS | 15.0% |
| !! | AATGAAATATTAAGGATCTA+AGG | + | chr5.1:10151039-10151058 | None:intergenic | 20.0% |
| !! | TATAAAATAATTGTGAAGGA+AGG | + | chr5.1:10150941-10150960 | None:intergenic | 20.0% |
| !! | TCAAATAAGGAAAAATTGTA+GGG | - | chr5.1:10151526-10151545 | MS.gene71393:CDS | 20.0% |
| !! | TCAGATTCAATGAAATATTA+AGG | + | chr5.1:10151047-10151066 | None:intergenic | 20.0% |
| ! | CCTAATAAGAATTCATTAAG+AGG | - | chr5.1:10150501-10150520 | MS.gene71393:intron | 25.0% |
| ! | CCTCTTAATGAATTCTTATT+AGG | + | chr5.1:10150504-10150523 | None:intergenic | 25.0% |
| ! | GTCAAATAAGGAAAAATTGT+AGG | - | chr5.1:10151525-10151544 | MS.gene71393:CDS | 25.0% |
| ! | TTAACTATTCTGTTCAGATT+TGG | + | chr5.1:10150194-10150213 | None:intergenic | 25.0% |
| !! | AAATCTCTGAAAAACAGAAT+AGG | + | chr5.1:10151452-10151471 | None:intergenic | 25.0% |
| !!! | AAAAATGTTTTGAGCAATTC+TGG | - | chr5.1:10151353-10151372 | MS.gene71393:CDS | 25.0% |
| !!! | ATTTCATTTTGGTGTTACTT+AGG | - | chr5.1:10150416-10150435 | MS.gene71393:CDS | 25.0% |
| !!! | TTTCATTTTGGTGTTACTTA+GGG | - | chr5.1:10150417-10150436 | MS.gene71393:CDS | 25.0% |
| ATGATTCAGACACACTAAAA+GGG | - | chr5.1:10150463-10150482 | MS.gene71393:CDS | 30.0% | |
| GTTTAAATCCTTAACTCCAA+AGG | - | chr5.1:10150988-10151007 | MS.gene71393:intron | 30.0% | |
| TGGTTAACTATTATAGCAAG+TGG | - | chr5.1:10151426-10151445 | MS.gene71393:CDS | 30.0% | |
| TTACATTGACGAAACAATCA+TGG | + | chr5.1:10150283-10150302 | None:intergenic | 30.0% | |
| TTCCAAAGGTCTTGAAAAAA+AGG | - | chr5.1:10150893-10150912 | MS.gene71393:intron | 30.0% | |
| ! | TGAACCTCTAGAAAACATTA+CGG | - | chr5.1:10150860-10150879 | MS.gene71393:intron | 30.0% |
| ! | TTTTTACATATGAGACCGAA+TGG | - | chr5.1:10151076-10151095 | MS.gene71393:CDS | 30.0% |
| !! | AATGTTTTCTAGAGGTTCAA+AGG | + | chr5.1:10150859-10150878 | None:intergenic | 30.0% |
| !! | ATGTTTTCTAGAGGTTCAAA+GGG | + | chr5.1:10150858-10150877 | None:intergenic | 30.0% |
| !!! | ATCCTTTTTTTCAAGACCTT+TGG | + | chr5.1:10150898-10150917 | None:intergenic | 30.0% |
| AAACCAAGACTATTCGACTT+TGG | - | chr5.1:10151188-10151207 | MS.gene71393:intron | 35.0% | |
| AATCCTTAACTCCAAAGGTT+TGG | - | chr5.1:10150993-10151012 | MS.gene71393:intron | 35.0% | |
| AGAAGTGATGAATCAAGTGA+TGG | + | chr5.1:10151233-10151252 | None:intergenic | 35.0% | |
| AGTCAATACACGTGTGAAAT+TGG | + | chr5.1:10151122-10151141 | None:intergenic | 35.0% | |
| ATGTCCAAATCAAGCTGTTT+CGG | - | chr5.1:10151271-10151290 | MS.gene71393:intron | 35.0% | |
| CGAAACAATCATGGAAATGA+AGG | + | chr5.1:10150274-10150293 | None:intergenic | 35.0% | |
| GATGATTCAGACACACTAAA+AGG | - | chr5.1:10150462-10150481 | MS.gene71393:CDS | 35.0% | |
| GCAGTTTCTGTTGAGAAAAT+GGG | - | chr5.1:10151473-10151492 | MS.gene71393:CDS | 35.0% | |
| TACTTGATATACAGCATCTC+TGG | + | chr5.1:10150613-10150632 | None:intergenic | 35.0% | |
| TGATTCAGACACACTAAAAG+GGG | - | chr5.1:10150464-10150483 | MS.gene71393:CDS | 35.0% | |
| TGCAGTTTCTGTTGAGAAAA+TGG | - | chr5.1:10151472-10151491 | MS.gene71393:CDS | 35.0% | |
| TTACTACTAGACCAAACCTT+TGG | + | chr5.1:10151007-10151026 | None:intergenic | 35.0% | |
| ! | AAGACCTTTGGAAATGAACT+TGG | + | chr5.1:10150886-10150905 | None:intergenic | 35.0% |
| ! | GGTTTGGTCTAGTAGTAAAA+AGG | - | chr5.1:10151009-10151028 | MS.gene71393:intron | 35.0% |
| !!! | TTTTTTCTTCCCAGAGTAGA+GGG | - | chr5.1:10150757-10150776 | MS.gene71393:CDS | 35.0% |
| !!! | TTTTTTTCTTCCCAGAGTAG+AGG | - | chr5.1:10150756-10150775 | MS.gene71393:CDS | 35.0% |
| CAATCAGACCAAGCTCTATT+AGG | - | chr5.1:10151383-10151402 | MS.gene71393:CDS | 40.0% | |
| CGACTAACTAGTACACCATT+CGG | + | chr5.1:10151094-10151113 | None:intergenic | 40.0% | |
| ! | TTGGCCGTAATGTTTTCTAG+AGG | + | chr5.1:10150867-10150886 | None:intergenic | 40.0% |
| !! | AAAGCATTGAGCAAAGCCAA+AGG | + | chr5.1:10151162-10151181 | None:intergenic | 40.0% |
| !! | AGACCAAACCTTTGGAGTTA+AGG | + | chr5.1:10150999-10151018 | None:intergenic | 40.0% |
| !! | CACGTGTATTGACTATATGC+AGG | - | chr5.1:10151128-10151147 | MS.gene71393:CDS | 40.0% |
| !! | TCAAATGTGTTGCTTGTGAC+AGG | + | chr5.1:10151320-10151339 | None:intergenic | 40.0% |
| ACGGCCAAGTTCATTTCCAA+AGG | - | chr5.1:10150879-10150898 | MS.gene71393:intron | 45.0% | |
| AGCAGCAATCCTTGAGTCAT+TGG | + | chr5.1:10150240-10150259 | None:intergenic | 45.0% | |
| AGGATCCAATGGAGCCAAAT+TGG | + | chr5.1:10151300-10151319 | None:intergenic | 45.0% | |
| CAGCTATAGCCAATGACTCA+AGG | - | chr5.1:10150228-10150247 | MS.gene71393:CDS | 45.0% | |
| CCAAGACTATTCGACTTTGG+TGG | - | chr5.1:10151191-10151210 | MS.gene71393:intron | 45.0% | |
| CCACCAAAGTCGAATAGTCT+TGG | + | chr5.1:10151194-10151213 | None:intergenic | 45.0% | |
| GATGTTCTTACGGGACAACA+GGG | - | chr5.1:10151503-10151522 | MS.gene71393:CDS | 45.0% | |
| GTGTCCGAAACAGCTTGATT+TGG | + | chr5.1:10151278-10151297 | None:intergenic | 45.0% | |
| TCAGCACATGACACTGTGTT+AGG | + | chr5.1:10150573-10150592 | None:intergenic | 45.0% | |
| TCTAGAGGTTCAAAGGGTGA+TGG | + | chr5.1:10150852-10150871 | None:intergenic | 45.0% | |
| TGACAGCACAACTGCTTCAT+TGG | - | chr5.1:10151406-10151425 | MS.gene71393:CDS | 45.0% | |
| TGATGTTCTTACGGGACAAC+AGG | - | chr5.1:10151502-10151521 | MS.gene71393:CDS | 45.0% | |
| TGCTGTCACCTAATAGAGCT+TGG | + | chr5.1:10151394-10151413 | None:intergenic | 45.0% | |
| TTGCTTGTGACAGGATCCAA+TGG | + | chr5.1:10151311-10151330 | None:intergenic | 45.0% | |
| ! | AGCTGTTTCGGACACCAATT+TGG | - | chr5.1:10151283-10151302 | MS.gene71393:intron | 45.0% |
| ! | GGGTCGCATTGATGTTCTTA+CGG | - | chr5.1:10151493-10151512 | MS.gene71393:CDS | 45.0% |
| ! | GGTCGCATTGATGTTCTTAC+GGG | - | chr5.1:10151494-10151513 | MS.gene71393:CDS | 45.0% |
| ! | TAGAGTTGAGAGCACACAAG+TGG | + | chr5.1:10150146-10150165 | None:intergenic | 45.0% |
| !! | ATGTGATGGATCTGTGCTAC+TGG | - | chr5.1:10150440-10150459 | MS.gene71393:CDS | 45.0% |
| !! | GGTGTTACTTAGGGATGTGA+TGG | - | chr5.1:10150426-10150445 | MS.gene71393:CDS | 45.0% |
| AAGGATGTAGCAGTGCTCTC+AGG | - | chr5.1:10150912-10150931 | MS.gene71393:intron | 50.0% | |
| CCAAAATGGCCCTCTACTCT+GGG | + | chr5.1:10150769-10150788 | None:intergenic | 50.0% | |
| CGGGACAACAGGGTCAAATA+AGG | - | chr5.1:10151513-10151532 | MS.gene71393:CDS | 50.0% | |
| GTACCTCTTGGTCGTAGAGA+TGG | - | chr5.1:10150792-10150811 | MS.gene71393:CDS | 50.0% | |
| TATGCAGGTGCACACACCTT+TGG | - | chr5.1:10151143-10151162 | MS.gene71393:CDS | 50.0% | |
| ! | CCAAGAGGTACAGCCCAAAA+TGG | + | chr5.1:10150783-10150802 | None:intergenic | 50.0% |
| ! | CCATTTTGGGCTGTACCTCT+TGG | - | chr5.1:10150780-10150799 | MS.gene71393:CDS | 50.0% |
| ! | CTATTCGACTTTGGTGGCTC+TGG | - | chr5.1:10151197-10151216 | MS.gene71393:intron | 50.0% |
| ! | GGACACCAATTTGGCTCCAT+TGG | - | chr5.1:10151292-10151311 | MS.gene71393:CDS | 50.0% |
| !! | CCAGAGTAGAGGGCCATTTT+GGG | - | chr5.1:10150767-10150786 | MS.gene71393:CDS | 50.0% |
| ATTTGCGTCGCTCTCACTCG+CGG | + | chr5.1:10150823-10150842 | None:intergenic | 55.0% | |
| CCCAAAATGGCCCTCTACTC+TGG | + | chr5.1:10150770-10150789 | None:intergenic | 55.0% | |
| GTGCCATCTCTACGACCAAG+AGG | + | chr5.1:10150798-10150817 | None:intergenic | 55.0% | |
| ! | CCCAGAGTAGAGGGCCATTT+TGG | - | chr5.1:10150766-10150785 | MS.gene71393:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 10150083 | 10151559 | 10150083 | ID=MS.gene71393 |
| chr5.1 | mRNA | 10150083 | 10151559 | 10150083 | ID=MS.gene71393.t1;Parent=MS.gene71393 |
| chr5.1 | exon | 10151290 | 10151559 | 10151290 | ID=MS.gene71393.t1.exon1;Parent=MS.gene71393.t1 |
| chr5.1 | CDS | 10151290 | 10151559 | 10151290 | ID=cds.MS.gene71393.t1;Parent=MS.gene71393.t1 |
| chr5.1 | exon | 10151013 | 10151204 | 10151013 | ID=MS.gene71393.t1.exon2;Parent=MS.gene71393.t1 |
| chr5.1 | CDS | 10151013 | 10151204 | 10151013 | ID=cds.MS.gene71393.t1;Parent=MS.gene71393.t1 |
| chr5.1 | exon | 10150709 | 10150871 | 10150709 | ID=MS.gene71393.t1.exon3;Parent=MS.gene71393.t1 |
| chr5.1 | CDS | 10150709 | 10150871 | 10150709 | ID=cds.MS.gene71393.t1;Parent=MS.gene71393.t1 |
| chr5.1 | exon | 10150083 | 10150492 | 10150083 | ID=MS.gene71393.t1.exon4;Parent=MS.gene71393.t1 |
| chr5.1 | CDS | 10150083 | 10150492 | 10150083 | ID=cds.MS.gene71393.t1;Parent=MS.gene71393.t1 |
| Gene Sequence |
| Protein sequence |
