Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72379.t1 | XP_013457568.1 | 91.5 | 423 | 30 | 1 | 1 | 417 | 3 | 425 | 6.00E-112 | 414.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72379.t1 | A0A072UP26 | 91.5 | 423 | 30 | 1 | 1 | 417 | 3 | 425 | 4.3e-112 | 414.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene72379 | 0.804996 | 1.65E-49 | -1.69E-46 |
| MS.gene049680 | MS.gene72379 | 0.809565 | 1.78E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene72379 | 0.860473 | 2.02E-63 | -1.69E-46 |
| MS.gene051043 | MS.gene72379 | 0.812846 | 3.45E-51 | -1.69E-46 |
| MS.gene051154 | MS.gene72379 | 0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene72379 | 0.805403 | 1.36E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene72379 | 0.86473 | 9.86E-65 | -1.69E-46 |
| MS.gene051731 | MS.gene72379 | 0.805103 | 1.57E-49 | -1.69E-46 |
| MS.gene051832 | MS.gene72379 | 0.80653 | 7.87E-50 | -1.69E-46 |
| MS.gene051959 | MS.gene72379 | 0.805215 | 1.49E-49 | -1.69E-46 |
| MS.gene051960 | MS.gene72379 | 0.804068 | 2.58E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene72379 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene72379 | 0.810026 | 1.41E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene72379 | 0.832645 | 8.40E-56 | -1.69E-46 |
| MS.gene053189 | MS.gene72379 | 0.828754 | 7.54E-55 | -1.69E-46 |
| MS.gene053401 | MS.gene72379 | 0.816728 | 4.76E-52 | -1.69E-46 |
| MS.gene053879 | MS.gene72379 | 0.80267 | 5.03E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene72379 | 0.83496 | 2.22E-56 | -1.69E-46 |
| MS.gene054222 | MS.gene72379 | 0.818548 | 1.85E-52 | -1.69E-46 |
| MS.gene054413 | MS.gene72379 | 0.826664 | 2.40E-54 | -1.69E-46 |
| MS.gene05469 | MS.gene72379 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene055150 | MS.gene72379 | 0.82503 | 5.85E-54 | -1.69E-46 |
| MS.gene056677 | MS.gene72379 | 0.801981 | 6.97E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene72379 | 0.825446 | 4.67E-54 | -1.69E-46 |
| MS.gene057694 | MS.gene72379 | 0.814457 | 1.53E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene72379 | 0.824362 | 8.41E-54 | -1.69E-46 |
| MS.gene058074 | MS.gene72379 | 0.845389 | 4.19E-59 | -1.69E-46 |
| MS.gene058159 | MS.gene72379 | 0.808095 | 3.66E-50 | -1.69E-46 |
| MS.gene058592 | MS.gene72379 | 0.815478 | 9.06E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene72379 | 0.829186 | 5.93E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene72379 | -0.851434 | 8.90E-61 | -1.69E-46 |
| MS.gene06018 | MS.gene72379 | 0.807629 | 4.60E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene72379 | 0.825573 | 4.36E-54 | -1.69E-46 |
| MS.gene060365 | MS.gene72379 | 0.820875 | 5.44E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene72379 | 0.810182 | 1.31E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene72379 | 0.807384 | 5.19E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72379.t1 | MTR_4g099180 | 96.454 | 423 | 9 | 1 | 1 | 417 | 3 | 425 | 0.0 | 847 |
| MS.gene72379.t1 | MTR_4g099180 | 94.755 | 286 | 9 | 1 | 1 | 280 | 3 | 288 | 0.0 | 555 |
| MS.gene72379.t1 | MTR_4g099180 | 95.088 | 285 | 8 | 1 | 1 | 279 | 3 | 287 | 0.0 | 555 |
| MS.gene72379.t1 | MTR_7g451440 | 56.637 | 452 | 148 | 8 | 3 | 415 | 2 | 444 | 1.40e-153 | 442 |
| MS.gene72379.t1 | MTR_8g007500 | 68.340 | 259 | 81 | 1 | 160 | 417 | 193 | 451 | 6.42e-117 | 349 |
| MS.gene72379.t1 | MTR_3g072650 | 51.786 | 336 | 130 | 6 | 84 | 410 | 109 | 421 | 4.02e-101 | 307 |
| MS.gene72379.t1 | MTR_5g058920 | 53.079 | 341 | 113 | 7 | 99 | 410 | 111 | 433 | 1.24e-100 | 306 |
| MS.gene72379.t1 | MTR_3g072650 | 54.478 | 268 | 100 | 5 | 84 | 342 | 109 | 363 | 2.17e-96 | 294 |
| MS.gene72379.t1 | MTR_8g080860 | 37.500 | 200 | 102 | 2 | 161 | 337 | 13 | 212 | 3.05e-30 | 118 |
| MS.gene72379.t1 | MTR_8g080860 | 32.673 | 202 | 113 | 1 | 162 | 340 | 37 | 238 | 2.14e-26 | 107 |
| MS.gene72379.t1 | MTR_8g080860 | 37.654 | 162 | 101 | 0 | 160 | 321 | 104 | 265 | 1.28e-25 | 105 |
| MS.gene72379.t1 | MTR_8g080860 | 34.659 | 176 | 115 | 0 | 164 | 339 | 85 | 260 | 6.45e-25 | 103 |
| MS.gene72379.t1 | MTR_8g080860 | 32.824 | 131 | 88 | 0 | 210 | 340 | 16 | 146 | 3.81e-17 | 81.6 |
| MS.gene72379.t1 | MTR_8g080860 | 37.500 | 200 | 102 | 2 | 161 | 337 | 17 | 216 | 3.06e-30 | 118 |
| MS.gene72379.t1 | MTR_8g080860 | 32.673 | 202 | 113 | 1 | 162 | 340 | 41 | 242 | 2.02e-26 | 107 |
| MS.gene72379.t1 | MTR_8g080860 | 37.654 | 162 | 101 | 0 | 160 | 321 | 108 | 269 | 1.27e-25 | 105 |
| MS.gene72379.t1 | MTR_8g080860 | 34.659 | 176 | 115 | 0 | 164 | 339 | 89 | 264 | 6.42e-25 | 103 |
| MS.gene72379.t1 | MTR_8g080860 | 32.824 | 131 | 88 | 0 | 210 | 340 | 20 | 150 | 3.92e-17 | 81.6 |
| MS.gene72379.t1 | MTR_8g088930 | 36.517 | 178 | 113 | 0 | 163 | 340 | 12 | 189 | 5.06e-30 | 123 |
| MS.gene72379.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 1.46e-19 | 91.7 |
| MS.gene72379.t1 | MTR_8g088930 | 35.664 | 143 | 84 | 2 | 140 | 277 | 56 | 195 | 4.85e-14 | 74.7 |
| MS.gene72379.t1 | MTR_8g088930 | 36.517 | 178 | 113 | 0 | 163 | 340 | 12 | 189 | 5.55e-30 | 122 |
| MS.gene72379.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 1.61e-19 | 91.7 |
| MS.gene72379.t1 | MTR_8g088930 | 35.664 | 143 | 84 | 2 | 140 | 277 | 56 | 195 | 5.16e-14 | 74.3 |
| MS.gene72379.t1 | MTR_8g088930 | 36.517 | 178 | 113 | 0 | 163 | 340 | 12 | 189 | 7.72e-30 | 122 |
| MS.gene72379.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 2.20e-19 | 90.9 |
| MS.gene72379.t1 | MTR_8g088930 | 35.664 | 143 | 84 | 2 | 140 | 277 | 56 | 195 | 6.16e-14 | 74.3 |
| MS.gene72379.t1 | MTR_8g088930 | 36.517 | 178 | 113 | 0 | 163 | 340 | 12 | 189 | 7.84e-30 | 122 |
| MS.gene72379.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 2.28e-19 | 90.9 |
| MS.gene72379.t1 | MTR_8g088930 | 35.664 | 143 | 84 | 2 | 140 | 277 | 56 | 195 | 5.88e-14 | 74.3 |
| MS.gene72379.t1 | MTR_8g092090 | 37.838 | 185 | 107 | 1 | 163 | 339 | 8 | 192 | 1.63e-27 | 110 |
| MS.gene72379.t1 | MTR_8g092090 | 36.478 | 159 | 101 | 0 | 152 | 310 | 74 | 232 | 1.04e-22 | 96.7 |
| MS.gene72379.t1 | MTR_1g050740 | 33.702 | 181 | 120 | 0 | 161 | 341 | 58 | 238 | 4.07e-26 | 111 |
| MS.gene72379.t1 | MTR_1g050740 | 32.609 | 184 | 121 | 1 | 162 | 345 | 82 | 262 | 3.40e-20 | 93.6 |
| MS.gene72379.t1 | MTR_4g107460 | 33.333 | 210 | 116 | 2 | 154 | 339 | 22 | 231 | 4.72e-26 | 108 |
| MS.gene72379.t1 | MTR_4g107460 | 34.831 | 178 | 115 | 1 | 164 | 340 | 9 | 186 | 2.78e-23 | 100 |
| MS.gene72379.t1 | MTR_4g107460 | 31.148 | 183 | 123 | 1 | 152 | 331 | 90 | 272 | 4.46e-19 | 88.2 |
| MS.gene72379.t1 | MTR_3g073100 | 36.416 | 173 | 109 | 1 | 165 | 336 | 58 | 230 | 5.92e-26 | 110 |
| MS.gene72379.t1 | MTR_3g073100 | 37.931 | 116 | 72 | 0 | 225 | 340 | 73 | 188 | 2.18e-18 | 87.8 |
| MS.gene72379.t1 | MTR_8g039100 | 28.063 | 253 | 164 | 3 | 161 | 395 | 50 | 302 | 1.30e-25 | 109 |
| MS.gene72379.t1 | MTR_8g039100 | 35.862 | 145 | 92 | 1 | 197 | 340 | 39 | 183 | 2.02e-18 | 88.2 |
| MS.gene72379.t1 | MTR_5g459450 | 36.527 | 167 | 106 | 0 | 161 | 327 | 66 | 232 | 2.56e-25 | 108 |
| MS.gene72379.t1 | MTR_5g459450 | 36.719 | 128 | 81 | 0 | 212 | 339 | 71 | 198 | 3.77e-19 | 90.5 |
| MS.gene72379.t1 | MTR_5g459450 | 33.019 | 106 | 71 | 0 | 235 | 340 | 71 | 176 | 5.16e-12 | 68.2 |
| MS.gene72379.t1 | MTR_3g097260 | 37.791 | 172 | 107 | 0 | 165 | 336 | 56 | 227 | 3.16e-25 | 108 |
| MS.gene72379.t1 | MTR_3g097260 | 34.109 | 129 | 85 | 0 | 163 | 291 | 100 | 228 | 2.55e-15 | 78.6 |
| MS.gene72379.t1 | MTR_3g097260 | 36.719 | 128 | 81 | 0 | 212 | 339 | 57 | 184 | 1.70e-12 | 69.7 |
| MS.gene72379.t1 | MTR_7g089950 | 32.948 | 173 | 116 | 0 | 161 | 333 | 68 | 240 | 1.76e-24 | 106 |
| MS.gene72379.t1 | MTR_3g014650 | 32.973 | 185 | 108 | 2 | 161 | 345 | 86 | 254 | 3.23e-22 | 99.8 |
| MS.gene72379.t1 | MTR_3g014650 | 27.545 | 167 | 118 | 1 | 156 | 322 | 95 | 258 | 2.15e-14 | 75.9 |
| MS.gene72379.t1 | MTR_8g095240 | 33.163 | 196 | 113 | 4 | 163 | 343 | 118 | 310 | 1.15e-21 | 96.7 |
| MS.gene72379.t1 | MTR_8g095240 | 30.303 | 231 | 118 | 4 | 153 | 340 | 30 | 260 | 1.26e-21 | 96.7 |
| MS.gene72379.t1 | MTR_8g095240 | 31.915 | 188 | 118 | 1 | 161 | 338 | 1 | 188 | 1.40e-20 | 93.6 |
| MS.gene72379.t1 | MTR_8g095240 | 34.706 | 170 | 108 | 2 | 160 | 326 | 171 | 340 | 1.51e-19 | 90.5 |
| MS.gene72379.t1 | MTR_8g095170 | 34.568 | 162 | 105 | 1 | 164 | 324 | 30 | 191 | 1.64e-21 | 97.4 |
| MS.gene72379.t1 | MTR_8g095170 | 39.130 | 115 | 70 | 0 | 225 | 339 | 46 | 160 | 1.54e-17 | 85.1 |
| MS.gene72379.t1 | MTR_8g095170 | 34.568 | 162 | 105 | 1 | 164 | 324 | 30 | 191 | 3.29e-21 | 96.3 |
| MS.gene72379.t1 | MTR_8g095170 | 39.130 | 115 | 70 | 0 | 225 | 339 | 46 | 160 | 2.77e-17 | 84.3 |
| MS.gene72379.t1 | MTR_1g062740 | 30.049 | 203 | 134 | 2 | 162 | 356 | 72 | 274 | 5.24e-21 | 95.9 |
| MS.gene72379.t1 | MTR_1g062740 | 31.818 | 176 | 120 | 0 | 165 | 340 | 52 | 227 | 9.46e-21 | 95.1 |
| MS.gene72379.t1 | MTR_1g062740 | 29.592 | 196 | 131 | 3 | 151 | 339 | 8 | 203 | 1.96e-18 | 88.2 |
| MS.gene72379.t1 | MTR_8g080340 | 40.336 | 119 | 71 | 0 | 203 | 321 | 35 | 153 | 9.63e-20 | 86.3 |
| MS.gene72379.t1 | MTR_8g080340 | 34.959 | 123 | 80 | 0 | 215 | 337 | 24 | 146 | 1.22e-16 | 77.8 |
| MS.gene72379.t1 | MTR_6g043150 | 33.333 | 189 | 103 | 1 | 164 | 329 | 79 | 267 | 3.40e-19 | 88.2 |
| MS.gene72379.t1 | MTR_6g043150 | 35.795 | 176 | 111 | 2 | 160 | 334 | 6 | 180 | 1.25e-18 | 86.7 |
| MS.gene72379.t1 | MTR_6g043150 | 36.306 | 157 | 100 | 0 | 162 | 318 | 169 | 325 | 1.38e-17 | 83.6 |
| MS.gene72379.t1 | MTR_6g043150 | 34.074 | 135 | 89 | 0 | 204 | 338 | 4 | 138 | 5.37e-15 | 75.9 |
| MS.gene72379.t1 | MTR_2g078470 | 31.746 | 189 | 106 | 1 | 164 | 329 | 148 | 336 | 7.22e-19 | 87.8 |
| MS.gene72379.t1 | MTR_2g078470 | 32.955 | 176 | 118 | 0 | 164 | 339 | 79 | 254 | 3.90e-17 | 82.8 |
| MS.gene72379.t1 | MTR_2g078470 | 31.250 | 192 | 109 | 1 | 161 | 329 | 7 | 198 | 1.30e-16 | 81.3 |
| MS.gene72379.t1 | MTR_2g078470 | 35.417 | 144 | 93 | 0 | 164 | 307 | 217 | 360 | 8.21e-14 | 72.8 |
| MS.gene72379.t1 | MTR_8g080310 | 35.556 | 135 | 87 | 0 | 206 | 340 | 6 | 140 | 7.59e-19 | 83.6 |
| MS.gene72379.t1 | MTR_8g080310 | 31.579 | 152 | 104 | 0 | 160 | 311 | 6 | 157 | 5.18e-16 | 75.5 |
| MS.gene72379.t1 | MTR_5g010840 | 32.955 | 176 | 110 | 1 | 164 | 339 | 181 | 348 | 6.50e-17 | 82.4 |
| MS.gene72379.t1 | MTR_5g010840 | 30.939 | 181 | 110 | 2 | 162 | 327 | 133 | 313 | 3.88e-15 | 77.0 |
| MS.gene72379.t1 | MTR_5g010840 | 32.911 | 158 | 105 | 1 | 153 | 309 | 207 | 364 | 1.79e-13 | 72.0 |
| MS.gene72379.t1 | MTR_5g010840 | 30.909 | 165 | 106 | 1 | 162 | 326 | 202 | 358 | 7.41e-13 | 70.1 |
| MS.gene72379.t1 | MTR_8g080350 | 36.441 | 118 | 73 | 1 | 192 | 309 | 87 | 202 | 7.71e-13 | 70.1 |
| MS.gene72379.t1 | MTR_8g080350 | 24.060 | 266 | 136 | 7 | 154 | 363 | 116 | 371 | 5.60e-12 | 67.4 |
| MS.gene72379.t1 | MTR_8g080350 | 28.708 | 209 | 106 | 7 | 139 | 317 | 145 | 340 | 3.47e-11 | 65.1 |
| MS.gene72379.t1 | MTR_8g092410 | 30.573 | 157 | 96 | 4 | 204 | 356 | 135 | 282 | 2.15e-12 | 68.6 |
| MS.gene72379.t1 | MTR_8g092410 | 27.528 | 178 | 97 | 3 | 114 | 265 | 112 | 283 | 1.29e-11 | 66.2 |
| MS.gene72379.t1 | MTR_3g023310 | 35.135 | 111 | 62 | 1 | 203 | 303 | 12 | 122 | 4.03e-12 | 64.7 |
| MS.gene72379.t1 | MTR_3g023310 | 36.893 | 103 | 55 | 1 | 248 | 340 | 11 | 113 | 6.70e-12 | 64.3 |
| MS.gene72379.t1 | MTR_1g112280 | 29.787 | 141 | 99 | 0 | 206 | 346 | 609 | 749 | 1.67e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72379.t1 | AT4G17080 | 57.143 | 392 | 130 | 5 | 40 | 408 | 125 | 501 | 9.40e-141 | 412 |
| MS.gene72379.t1 | AT2G35170 | 58.235 | 340 | 119 | 6 | 68 | 384 | 107 | 446 | 1.28e-130 | 385 |
| MS.gene72379.t1 | AT1G21920 | 54.180 | 323 | 132 | 3 | 94 | 410 | 98 | 410 | 2.35e-101 | 308 |
| MS.gene72379.t1 | AT1G21920 | 57.540 | 252 | 101 | 2 | 94 | 339 | 98 | 349 | 4.88e-98 | 298 |
| MS.gene72379.t1 | AT1G77660 | 54.180 | 323 | 129 | 6 | 97 | 410 | 102 | 414 | 7.40e-96 | 294 |
| MS.gene72379.t1 | AT1G21980 | 37.647 | 170 | 106 | 0 | 165 | 334 | 77 | 246 | 1.09e-28 | 119 |
| MS.gene72379.t1 | AT1G21980 | 37.500 | 128 | 80 | 0 | 212 | 339 | 78 | 205 | 2.63e-19 | 90.9 |
| MS.gene72379.t1 | AT1G21980 | 30.370 | 135 | 93 | 1 | 163 | 296 | 121 | 255 | 5.87e-12 | 68.2 |
| MS.gene72379.t1 | AT2G41210 | 36.782 | 174 | 110 | 0 | 161 | 334 | 67 | 240 | 3.27e-28 | 117 |
| MS.gene72379.t1 | AT2G41210 | 38.281 | 128 | 79 | 0 | 212 | 339 | 72 | 199 | 1.19e-20 | 95.1 |
| MS.gene72379.t1 | AT1G77740 | 36.471 | 170 | 108 | 0 | 165 | 334 | 78 | 247 | 2.28e-27 | 115 |
| MS.gene72379.t1 | AT1G77740 | 36.719 | 128 | 81 | 0 | 212 | 339 | 79 | 206 | 6.44e-18 | 86.7 |
| MS.gene72379.t1 | AT1G77740 | 33.962 | 106 | 70 | 0 | 235 | 340 | 79 | 184 | 4.09e-11 | 65.5 |
| MS.gene72379.t1 | AT1G77740 | 36.471 | 170 | 108 | 0 | 165 | 334 | 78 | 247 | 2.28e-27 | 115 |
| MS.gene72379.t1 | AT1G77740 | 36.719 | 128 | 81 | 0 | 212 | 339 | 79 | 206 | 6.44e-18 | 86.7 |
| MS.gene72379.t1 | AT1G77740 | 33.962 | 106 | 70 | 0 | 235 | 340 | 79 | 184 | 4.09e-11 | 65.5 |
| MS.gene72379.t1 | AT3G56960 | 32.955 | 176 | 118 | 0 | 161 | 336 | 69 | 244 | 2.81e-26 | 112 |
| MS.gene72379.t1 | AT3G56960 | 36.719 | 128 | 81 | 0 | 212 | 339 | 74 | 201 | 4.80e-20 | 93.2 |
| MS.gene72379.t1 | AT3G56960 | 32.955 | 176 | 118 | 0 | 161 | 336 | 69 | 244 | 2.81e-26 | 112 |
| MS.gene72379.t1 | AT3G56960 | 36.719 | 128 | 81 | 0 | 212 | 339 | 74 | 201 | 4.80e-20 | 93.2 |
| MS.gene72379.t1 | AT1G60890 | 35.000 | 180 | 117 | 0 | 161 | 340 | 8 | 187 | 1.52e-25 | 109 |
| MS.gene72379.t1 | AT1G60890 | 34.118 | 170 | 112 | 0 | 153 | 322 | 23 | 192 | 1.19e-24 | 107 |
| MS.gene72379.t1 | AT1G60890 | 34.513 | 113 | 74 | 0 | 165 | 277 | 81 | 193 | 2.85e-12 | 68.9 |
| MS.gene72379.t1 | AT2G26420 | 34.921 | 189 | 119 | 2 | 161 | 349 | 50 | 234 | 1.63e-25 | 109 |
| MS.gene72379.t1 | AT2G26420 | 34.921 | 189 | 119 | 2 | 161 | 349 | 50 | 234 | 1.73e-25 | 109 |
| MS.gene72379.t1 | AT2G26420 | 34.921 | 189 | 119 | 2 | 161 | 349 | 50 | 234 | 1.73e-25 | 109 |
| MS.gene72379.t1 | AT1G60890 | 35.000 | 180 | 117 | 0 | 161 | 340 | 20 | 199 | 1.88e-25 | 109 |
| MS.gene72379.t1 | AT1G60890 | 34.783 | 161 | 105 | 0 | 162 | 322 | 44 | 204 | 1.50e-24 | 106 |
| MS.gene72379.t1 | AT1G60890 | 34.513 | 113 | 74 | 0 | 165 | 277 | 93 | 205 | 3.36e-12 | 68.9 |
| MS.gene72379.t1 | AT3G07960 | 32.796 | 186 | 121 | 1 | 161 | 346 | 24 | 205 | 1.72e-24 | 106 |
| MS.gene72379.t1 | AT3G07960 | 32.796 | 186 | 121 | 1 | 161 | 346 | 24 | 205 | 1.96e-24 | 106 |
| MS.gene72379.t1 | AT3G07960 | 32.796 | 186 | 121 | 1 | 161 | 346 | 24 | 205 | 1.96e-24 | 106 |
| MS.gene72379.t1 | AT1G10900 | 35.393 | 178 | 115 | 0 | 163 | 340 | 10 | 187 | 2.28e-24 | 106 |
| MS.gene72379.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 163 | 322 | 33 | 192 | 2.59e-24 | 105 |
| MS.gene72379.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 205 | 337 | 6 | 161 | 1.09e-15 | 79.7 |
| MS.gene72379.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 139 | 277 | 53 | 193 | 1.06e-11 | 67.4 |
| MS.gene72379.t1 | AT1G10900 | 35.393 | 178 | 115 | 0 | 163 | 340 | 10 | 187 | 2.28e-24 | 106 |
| MS.gene72379.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 163 | 322 | 33 | 192 | 2.59e-24 | 105 |
| MS.gene72379.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 205 | 337 | 6 | 161 | 1.09e-15 | 79.7 |
| MS.gene72379.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 139 | 277 | 53 | 193 | 1.06e-11 | 67.4 |
| MS.gene72379.t1 | AT1G10900 | 35.393 | 178 | 115 | 0 | 163 | 340 | 10 | 187 | 2.28e-24 | 106 |
| MS.gene72379.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 163 | 322 | 33 | 192 | 2.59e-24 | 105 |
| MS.gene72379.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 205 | 337 | 6 | 161 | 1.09e-15 | 79.7 |
| MS.gene72379.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 139 | 277 | 53 | 193 | 1.06e-11 | 67.4 |
| MS.gene72379.t1 | AT3G07960 | 32.796 | 186 | 121 | 1 | 161 | 346 | 24 | 205 | 2.31e-24 | 105 |
| MS.gene72379.t1 | AT3G09920 | 27.799 | 259 | 166 | 2 | 146 | 392 | 23 | 272 | 2.51e-22 | 100 |
| MS.gene72379.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 6.56e-21 | 95.9 |
| MS.gene72379.t1 | AT3G09920 | 27.799 | 259 | 166 | 2 | 146 | 392 | 23 | 272 | 2.51e-22 | 100 |
| MS.gene72379.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 6.56e-21 | 95.9 |
| MS.gene72379.t1 | AT3G09920 | 27.799 | 259 | 166 | 2 | 146 | 392 | 23 | 272 | 2.51e-22 | 100 |
| MS.gene72379.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 6.56e-21 | 95.9 |
| MS.gene72379.t1 | AT3G09920 | 27.799 | 259 | 166 | 2 | 146 | 392 | 23 | 272 | 2.51e-22 | 100 |
| MS.gene72379.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 6.56e-21 | 95.9 |
Find 97 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTAGGACGGTACCATTTC+AGG | 0.220617 | 8.3:+21470479 | MS.gene72379:CDS |
| CTTGAAAGATTGAAACTTTG+AGG | 0.305718 | 8.3:-21469870 | None:intergenic |
| AGAGCTTAAATTCTGGATCT+TGG | 0.306677 | 8.3:+21470119 | MS.gene72379:CDS |
| CAACGTGTTGTATGGTCAAT+TGG | 0.311671 | 8.3:+21470076 | MS.gene72379:CDS |
| TTTGAAGGTGATTGGATTGA+TGG | 0.327944 | 8.3:+21470238 | MS.gene72379:CDS |
| AACAAATCTGATTCTGAAAT+CGG | 0.341623 | 8.3:+21469677 | MS.gene72379:CDS |
| TTTGGTGGTGATGTTTATAC+TGG | 0.359699 | 8.3:+21470361 | MS.gene72379:CDS |
| GAGAAAGTAAAGAGAGGTTA+AGG | 0.372259 | 8.3:-21469927 | None:intergenic |
| GAGCTTAAATTCTGGATCTT+GGG | 0.376585 | 8.3:+21470120 | MS.gene72379:CDS |
| CATATGAGTGGAAGATTTGA+AGG | 0.378466 | 8.3:+21470223 | MS.gene72379:CDS |
| GATTGAAACTTTGAGGTAAA+GGG | 0.380834 | 8.3:-21469863 | None:intergenic |
| TTTCATAAGGGGAAGTGCTC+AGG | 0.382882 | 8.3:+21470181 | MS.gene72379:CDS |
| ATTATGTTGGGGAATTCAAA+TGG | 0.385157 | 8.3:+21470443 | MS.gene72379:CDS |
| TTTCAGAATCAGATTTGTTA+AGG | 0.386777 | 8.3:-21469673 | None:intergenic |
| TCAACGATCTTGAGAAGAAT+AGG | 0.388984 | 8.3:-21470021 | None:intergenic |
| GTGGAAGATTTGAAGGTGAT+TGG | 0.394569 | 8.3:+21470230 | MS.gene72379:CDS |
| TGGGGTGTTAAACATGGATT+AGG | 0.409371 | 8.3:+21470463 | MS.gene72379:CDS |
| GGAGTTCATACTTGCAATGA+TGG | 0.416556 | 8.3:+21470415 | MS.gene72379:CDS |
| AAGGGTTTGAGGCATGGAAT+TGG | 0.418367 | 8.3:+21470325 | MS.gene72379:CDS |
| AAAAGCAAGACAGTCATATT+GGG | 0.421127 | 8.3:+21471873 | MS.gene72379:CDS |
| AATGGTCAGTGTCATGGCTT+TGG | 0.421143 | 8.3:+21470394 | MS.gene72379:CDS |
| TATGAAGGTGAGTTTCATAA+GGG | 0.426937 | 8.3:+21470169 | MS.gene72379:CDS |
| GAGTTAAAGAGCTTAAATTC+TGG | 0.427388 | 8.3:+21470112 | MS.gene72379:CDS |
| GCGGATATGATGCATGGCTT+TGG | 0.433142 | 8.3:+21471713 | MS.gene72379:CDS |
| GGCATGGAATTGGAACTTAT+AGG | 0.433435 | 8.3:+21470335 | MS.gene72379:CDS |
| TGCTTGAGAAGCGTTGTTCA+TGG | 0.439654 | 8.3:-21469769 | None:intergenic |
| TTATGAAGGTGAGTTTCATA+AGG | 0.441190 | 8.3:+21470168 | MS.gene72379:CDS |
| AGTGTGGTCACTGGCAGAAT+GGG | 0.442429 | 8.3:+21471834 | MS.gene72379:CDS |
| CATGCCACGCACCCTCATAT+CGG | 0.449588 | 8.3:-21471760 | None:intergenic |
| TCAGAATGGTCACCGATATG+AGG | 0.450366 | 8.3:+21471748 | MS.gene72379:CDS |
| CTCATCATCAACGTGTTGTA+TGG | 0.452247 | 8.3:+21470068 | MS.gene72379:CDS |
| AGATTGAAACTTTGAGGTAA+AGG | 0.454037 | 8.3:-21469864 | None:intergenic |
| GATGGAAAGTATGATGGGTT+TGG | 0.464094 | 8.3:+21470256 | MS.gene72379:CDS |
| GAATAATAAGCTTTCTTCAT+CGG | 0.464931 | 8.3:+21470042 | MS.gene72379:CDS |
| GTAGGTATCGTGGACAGTAT+AGG | 0.468147 | 8.3:+21470302 | MS.gene72379:CDS |
| TTATGTTGGGGAATTCAAAT+GGG | 0.469276 | 8.3:+21470444 | MS.gene72379:CDS |
| CAGTGTGGTCACTGGCAGAA+TGG | 0.474325 | 8.3:+21471833 | MS.gene72379:CDS |
| AAGAGAAAATCAAGAAGAGT+TGG | 0.478692 | 8.3:-21469959 | None:intergenic |
| GTAAAGGGTATTGTAAAAGA+AGG | 0.483157 | 8.3:-21469848 | None:intergenic |
| TGGATTGATGGAAAGTATGA+TGG | 0.494170 | 8.3:+21470250 | MS.gene72379:CDS |
| ATGATGGGAGTCATTATGTT+GGG | 0.495925 | 8.3:+21470431 | MS.gene72379:CDS |
| AATGTCAAAGAAGGATGAAC+TGG | 0.498099 | 8.3:+21472596 | MS.gene72379:CDS |
| TGAAGGAAGAAGACAAGGAC+TGG | 0.499777 | 8.3:+21471781 | MS.gene72379:CDS |
| CTGGACAGCTTTGAAAACCT+TGG | 0.499930 | 8.3:-21471918 | None:intergenic |
| GGTGTATGAGATGGTGAAGA+TGG | 0.507475 | 8.3:-21469797 | None:intergenic |
| GGAGTCTATCAATTTCAGAA+TGG | 0.507486 | 8.3:+21471734 | MS.gene72379:CDS |
| GAAAATGATGAGGAGTAACT+TGG | 0.509080 | 8.3:-21469745 | None:intergenic |
| AACGTGTTGTATGGTCAATT+GGG | 0.513400 | 8.3:+21470077 | MS.gene72379:CDS |
| TTCAAATGGGGTGTTAAACA+TGG | 0.513973 | 8.3:+21470457 | MS.gene72379:CDS |
| TGGGTTCAAGTTTACAGCAA+TGG | 0.526362 | 8.3:+21470139 | MS.gene72379:CDS |
| GTCAATTGGGTCAAAGGATG+AGG | 0.530313 | 8.3:+21470090 | MS.gene72379:CDS |
| CATATCCGCAAAATATTCTC+CGG | 0.537617 | 8.3:-21471699 | None:intergenic |
| TATAGGAAGGGTTTGAGGCA+TGG | 0.542708 | 8.3:+21470319 | MS.gene72379:CDS |
| TATGAGGGTGCGTGGCATGA+AGG | 0.544188 | 8.3:+21471764 | MS.gene72379:CDS |
| GTGATGTTTATACTGGTGAA+TGG | 0.551261 | 8.3:+21470368 | MS.gene72379:CDS |
| GACAGTATAGGAAGGGTTTG+AGG | 0.555234 | 8.3:+21470314 | MS.gene72379:CDS |
| GGGAAACACAGTGTGGTCAC+TGG | 0.556623 | 8.3:+21471825 | MS.gene72379:CDS |
| TGAAAAGAGAAAGTAAAGAG+AGG | 0.558903 | 8.3:-21469933 | None:intergenic |
| ATCCTTCTTTGACATTCCGT+AGG | 0.560605 | 8.3:-21472589 | None:intergenic |
| ATCATTGAACATTGTAATCA+CGG | 0.560703 | 8.3:-21472701 | None:intergenic |
| AAGGGGAAGTGCTCAGGGAG+TGG | 0.561581 | 8.3:+21470187 | MS.gene72379:CDS |
| GAGTTCATACTTGCAATGAT+GGG | 0.567190 | 8.3:+21470416 | MS.gene72379:CDS |
| AGCTAGAGTTGCAGCTGTGA+AGG | 0.569793 | 8.3:+21472659 | MS.gene72379:CDS |
| TTCATAAGGGGAAGTGCTCA+GGG | 0.572490 | 8.3:+21470182 | MS.gene72379:CDS |
| TATACTGGTGAATGGTGTAA+TGG | 0.573863 | 8.3:+21470376 | MS.gene72379:CDS |
| AGCAATGGTGATGTTTATGA+AGG | 0.574309 | 8.3:+21470154 | MS.gene72379:CDS |
| CAGAATGGTCACCGATATGA+GGG | 0.575287 | 8.3:+21471749 | MS.gene72379:CDS |
| CAGCTTTGAAAACCTTGGCA+TGG | 0.579822 | 8.3:-21471913 | None:intergenic |
| AGCCTACGGAATGTCAAAGA+AGG | 0.581674 | 8.3:+21472587 | MS.gene72379:CDS |
| GGATTGATGGAAAGTATGAT+GGG | 0.582051 | 8.3:+21470251 | MS.gene72379:CDS |
| ATGGGTTTGGTGTTGAAACG+TGG | 0.586936 | 8.3:+21470269 | MS.gene72379:CDS |
| GGTGTTGAAACGTGGGCTAG+AGG | 0.588676 | 8.3:+21470277 | MS.gene72379:CDS |
| TTGTGTGTAGGTGTATGAGA+TGG | 0.591599 | 8.3:-21469806 | None:intergenic |
| TGTATGGTCAATTGGGTCAA+AGG | 0.595542 | 8.3:+21470084 | MS.gene72379:CDS |
| AGAAATGGGGACATATATGC+CGG | 0.598656 | 8.3:+21471680 | MS.gene72379:intron |
| AAACGTGGGCTAGAGGAAGT+AGG | 0.599270 | 8.3:+21470284 | MS.gene72379:CDS |
| TGGTGTAATGGTCAGTGTCA+TGG | 0.600058 | 8.3:+21470388 | MS.gene72379:CDS |
| GAAGGAAGAAGACAAGGACT+GGG | 0.603856 | 8.3:+21471782 | MS.gene72379:CDS |
| GTATCGTGGACAGTATAGGA+AGG | 0.617143 | 8.3:+21470306 | MS.gene72379:CDS |
| TGAACAGGATGCTCATTGTG+CGG | 0.617594 | 8.3:+21472557 | MS.gene72379:intron |
| GTCACCGATATGAGGGTGCG+TGG | 0.630941 | 8.3:+21471756 | MS.gene72379:CDS |
| AATGATGGGAGTCATTATGT+TGG | 0.635184 | 8.3:+21470430 | MS.gene72379:CDS |
| TTGTTATTACTGCAGAAATG+GGG | 0.635687 | 8.3:+21471667 | MS.gene72379:intron |
| TGATGGGAGTCATTATGTTG+GGG | 0.636425 | 8.3:+21470432 | MS.gene72379:CDS |
| TGTGCGGCGGAGAAAGCCTA+CGG | 0.641747 | 8.3:+21472573 | MS.gene72379:CDS |
| TTGGCATGGTCTACAGCACA+TGG | 0.645980 | 8.3:-21471899 | None:intergenic |
| ATGTGCTGTAGACCATGCCA+AGG | 0.647382 | 8.3:+21471901 | MS.gene72379:CDS |
| TATCGTGGACAGTATAGGAA+GGG | 0.648017 | 8.3:+21470307 | MS.gene72379:CDS |
| TATGTTGGGGAATTCAAATG+GGG | 0.656507 | 8.3:+21470445 | MS.gene72379:CDS |
| TGGCATGAAGGAAGAAGACA+AGG | 0.660942 | 8.3:+21471776 | MS.gene72379:CDS |
| TGGGTTTGGTGTTGAAACGT+GGG | 0.670518 | 8.3:+21470270 | MS.gene72379:CDS |
| ATGAAGGTGAGTTTCATAAG+GGG | 0.671828 | 8.3:+21470170 | MS.gene72379:CDS |
| GCTAGAGGAAGTAGGTATCG+TGG | 0.672052 | 8.3:+21470292 | MS.gene72379:CDS |
| GTGTTAAACATGGATTAGGA+CGG | 0.683306 | 8.3:+21470467 | MS.gene72379:CDS |
| ACAGGATGCTCATTGTGCGG+CGG | 0.690381 | 8.3:+21472560 | MS.gene72379:intron |
| TGTTCATGGTGAAAATGATG+AGG | 0.704077 | 8.3:-21469755 | None:intergenic |
| AGAAACGGGGAAACACAGTG+TGG | 0.759758 | 8.3:+21471818 | MS.gene72379:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAGAATTTACTTTTATTT+GGG | + | chr8.3:21470790-21470809 | MS.gene72379:intron | 15.0% |
| !!! | CAAAGCTTTATATAAAAAAT+GGG | - | chr8.3:21470969-21470988 | None:intergenic | 15.0% |
| !!! | TAAGAGAATTTACTTTTATT+TGG | + | chr8.3:21470789-21470808 | MS.gene72379:intron | 15.0% |
| !! | AAGTAAAAAATGATGAAATC+AGG | - | chr8.3:21472175-21472194 | None:intergenic | 20.0% |
| !! | AATACAGATAAAAATCAAAC+TGG | - | chr8.3:21471374-21471393 | None:intergenic | 20.0% |
| !! | AGTAAAAAATGATGAAATCA+GGG | - | chr8.3:21472174-21472193 | None:intergenic | 20.0% |
| !! | ATGTCAATCAAATTGAATAA+TGG | - | chr8.3:21471549-21471568 | None:intergenic | 20.0% |
| !! | CATAGTTATTACTTATTGTT+TGG | - | chr8.3:21472506-21472525 | None:intergenic | 20.0% |
| !! | CTTAAAATGAACACAAAATT+GGG | - | chr8.3:21470773-21470792 | None:intergenic | 20.0% |
| !! | TCTTAAAATGAACACAAAAT+TGG | - | chr8.3:21470774-21470793 | None:intergenic | 20.0% |
| !! | TGTCAATCAAATTGAATAAT+GGG | - | chr8.3:21471548-21471567 | None:intergenic | 20.0% |
| !!! | AGTTCAAAATTGTATTTTAG+TGG | - | chr8.3:21470635-21470654 | None:intergenic | 20.0% |
| !!! | ATCATTTTTTACTTTCTACT+TGG | + | chr8.3:21472181-21472200 | MS.gene72379:intron | 20.0% |
| !!! | CATGATTATATATTGTTTTG+TGG | + | chr8.3:21472064-21472083 | MS.gene72379:intron | 20.0% |
| !!! | CCAAAGCTTTATATAAAAAA+TGG | - | chr8.3:21470970-21470989 | None:intergenic | 20.0% |
| !!! | CCATTTTTTATATAAAGCTT+TGG | + | chr8.3:21470967-21470986 | MS.gene72379:intron | 20.0% |
| !!! | TCATTTTTTACTTTCTACTT+GGG | + | chr8.3:21472182-21472201 | MS.gene72379:intron | 20.0% |
| ! | AAAAAAGAACTAACCTGAAA+TGG | - | chr8.3:21470495-21470514 | None:intergenic | 25.0% |
| ! | AAACAGTCTTACAAATATGA+TGG | - | chr8.3:21472279-21472298 | None:intergenic | 25.0% |
| ! | ATCATATTTGTAAGACTGTT+TGG | + | chr8.3:21472278-21472297 | MS.gene72379:intron | 25.0% |
| ! | ATTTACTTTCAAAAGCCAAA+AGG | + | chr8.3:21471214-21471233 | MS.gene72379:intron | 25.0% |
| ! | CTAGCAATGTATAATGTAAT+TGG | + | chr8.3:21471571-21471590 | MS.gene72379:intron | 25.0% |
| ! | GAATAATAAGCTTTCTTCAT+CGG | + | chr8.3:21470042-21470061 | MS.gene72379:CDS | 25.0% |
| ! | GATTGAAAAATGAGTGAAAT+CGG | - | chr8.3:21469726-21469745 | None:intergenic | 25.0% |
| ! | TAAAATACTTGGAAAGTGAT+TGG | + | chr8.3:21471410-21471429 | MS.gene72379:intron | 25.0% |
| ! | TCATATTTGTAAGACTGTTT+GGG | + | chr8.3:21472279-21472298 | MS.gene72379:intron | 25.0% |
| ! | TGTATGTGTTTCTTCTAAAT+AGG | + | chr8.3:21471310-21471329 | MS.gene72379:intron | 25.0% |
| ! | TTATGTGAAAAACTACTGTA+AGG | + | chr8.3:21472001-21472020 | MS.gene72379:intron | 25.0% |
| ! | TTGTATCTAGCTAAAATACT+TGG | + | chr8.3:21471399-21471418 | MS.gene72379:intron | 25.0% |
| ! | TTTCATAAACTATCTTACAG+AGG | - | chr8.3:21472363-21472382 | None:intergenic | 25.0% |
| !! | AGATTTGACATTATCTGTTT+TGG | + | chr8.3:21470660-21470679 | MS.gene72379:intron | 25.0% |
| !! | GTTTATCATTTTCATATGAG+TGG | + | chr8.3:21470211-21470230 | MS.gene72379:CDS | 25.0% |
| !!! | AAAAGAAGGTTTGTTTTGAT+GGG | - | chr8.3:21469837-21469856 | None:intergenic | 25.0% |
| !!! | AACAAATCTGATTCTGAAAT+CGG | + | chr8.3:21469677-21469696 | MS.gene72379:CDS | 25.0% |
| !!! | ATTGGAACTTATAGGTTTTT+TGG | + | chr8.3:21470343-21470362 | MS.gene72379:CDS | 25.0% |
| !!! | ATTTGTTATTACTGCAGAAA+TGG | + | chr8.3:21471665-21471684 | MS.gene72379:intron | 25.0% |
| !!! | GATATTTATTTAGCTTTGGT+AGG | + | chr8.3:21471085-21471104 | MS.gene72379:intron | 25.0% |
| !!! | GTACTTCTTTAATTTTGAAC+AGG | + | chr8.3:21472542-21472561 | MS.gene72379:intron | 25.0% |
| !!! | TAAAAGAAGGTTTGTTTTGA+TGG | - | chr8.3:21469838-21469857 | None:intergenic | 25.0% |
| !!! | TTTCAGAATCAGATTTGTTA+AGG | - | chr8.3:21469676-21469695 | None:intergenic | 25.0% |
| !!! | TTTGTTATTACTGCAGAAAT+GGG | + | chr8.3:21471666-21471685 | MS.gene72379:intron | 25.0% |
| AAAAAGCAAGACAGTCATAT+TGG | + | chr8.3:21471872-21471891 | MS.gene72379:CDS | 30.0% | |
| AAAAGCAAGACAGTCATATT+GGG | + | chr8.3:21471873-21471892 | MS.gene72379:CDS | 30.0% | |
| AAGAGAAAATCAAGAAGAGT+TGG | - | chr8.3:21469962-21469981 | None:intergenic | 30.0% | |
| ATCCAAAAATGACTATTACC+TGG | - | chr8.3:21471940-21471959 | None:intergenic | 30.0% | |
| ATTAACCACGATTCAGTATT+TGG | + | chr8.3:21471253-21471272 | MS.gene72379:intron | 30.0% | |
| ATTATGTTGGGGAATTCAAA+TGG | + | chr8.3:21470443-21470462 | MS.gene72379:CDS | 30.0% | |
| CTTGAAAGATTGAAACTTTG+AGG | - | chr8.3:21469873-21469892 | None:intergenic | 30.0% | |
| GAGTTAAAGAGCTTAAATTC+TGG | + | chr8.3:21470112-21470131 | MS.gene72379:CDS | 30.0% | |
| GGTTGAGACATTATATAGTT+TGG | - | chr8.3:21471353-21471372 | None:intergenic | 30.0% | |
| GTCAAATTCTTCACATATAG+TGG | + | chr8.3:21470927-21470946 | MS.gene72379:intron | 30.0% | |
| TAATTGTGTCAATGTCAAGT+CGG | + | chr8.3:21470825-21470844 | MS.gene72379:intron | 30.0% | |
| TATGAAGGTGAGTTTCATAA+GGG | + | chr8.3:21470169-21470188 | MS.gene72379:CDS | 30.0% | |
| TGAAAAGAGAAAGTAAAGAG+AGG | - | chr8.3:21469936-21469955 | None:intergenic | 30.0% | |
| TTATGAAGGTGAGTTTCATA+AGG | + | chr8.3:21470168-21470187 | MS.gene72379:CDS | 30.0% | |
| TTATGTTGGGGAATTCAAAT+GGG | + | chr8.3:21470444-21470463 | MS.gene72379:CDS | 30.0% | |
| ! | GTATACTTTTCTGCTTTCAT+GGG | + | chr8.3:21471275-21471294 | MS.gene72379:intron | 30.0% |
| ! | TAACCATTCTGATAATGCTA+AGG | - | chr8.3:21470551-21470570 | None:intergenic | 30.0% |
| ! | TTGTTATTACTGCAGAAATG+GGG | + | chr8.3:21471667-21471686 | MS.gene72379:intron | 30.0% |
| !! | AATCACTTTTACAAGTTCAG+CGG | + | chr8.3:21471061-21471080 | MS.gene72379:intron | 30.0% |
| !! | AATGTACACTTTTAGAAACG+GGG | + | chr8.3:21471805-21471824 | MS.gene72379:CDS | 30.0% |
| !! | AGATTGAAACTTTGAGGTAA+AGG | - | chr8.3:21469867-21469886 | None:intergenic | 30.0% |
| !! | GAATGTACACTTTTAGAAAC+GGG | + | chr8.3:21471804-21471823 | MS.gene72379:CDS | 30.0% |
| !! | GATTGAAACTTTGAGGTAAA+GGG | - | chr8.3:21469866-21469885 | None:intergenic | 30.0% |
| !! | GGAATGTACACTTTTAGAAA+CGG | + | chr8.3:21471803-21471822 | MS.gene72379:CDS | 30.0% |
| !! | GTAAAGGGTATTGTAAAAGA+AGG | - | chr8.3:21469851-21469870 | None:intergenic | 30.0% |
| !! | TGTTGATTCTTTGTTAAGTG+TGG | + | chr8.3:21470573-21470592 | MS.gene72379:intron | 30.0% |
| !!! | ATATGACTGTCTTGCTTTTT+AGG | - | chr8.3:21471872-21471891 | None:intergenic | 30.0% |
| !!! | TATGACTGTCTTGCTTTTTA+GGG | - | chr8.3:21471871-21471890 | None:intergenic | 30.0% |
| AAATCAGGGAATGTCTATTC+AGG | - | chr8.3:21472160-21472179 | None:intergenic | 35.0% | |
| AACGTGTTGTATGGTCAATT+GGG | + | chr8.3:21470077-21470096 | MS.gene72379:CDS | 35.0% | |
| AACTTGACCATATTCTTGCA+CGG | - | chr8.3:21471491-21471510 | None:intergenic | 35.0% | |
| AATGTCAAAGAAGGATGAAC+TGG | + | chr8.3:21472596-21472615 | MS.gene72379:CDS | 35.0% | |
| ACTTGTAAAAGTGATTGGCA+AGG | - | chr8.3:21471057-21471076 | None:intergenic | 35.0% | |
| AGAGCTTAAATTCTGGATCT+TGG | + | chr8.3:21470119-21470138 | MS.gene72379:CDS | 35.0% | |
| ATAGTGGTCATTGTGATTCT+AGG | + | chr8.3:21470943-21470962 | MS.gene72379:intron | 35.0% | |
| ATCGTGGTTAATGAGAAACT+AGG | - | chr8.3:21471245-21471264 | None:intergenic | 35.0% | |
| ATGAAGGTGAGTTTCATAAG+GGG | + | chr8.3:21470170-21470189 | MS.gene72379:CDS | 35.0% | |
| CAGGTTGTTGAAAATTTGAG+TGG | - | chr8.3:21471006-21471025 | None:intergenic | 35.0% | |
| CATATCCGCAAAATATTCTC+CGG | - | chr8.3:21471702-21471721 | None:intergenic | 35.0% | |
| CATATGAGTGGAAGATTTGA+AGG | + | chr8.3:21470223-21470242 | MS.gene72379:CDS | 35.0% | |
| CTAGTACAACAGAATGTTGT+TGG | - | chr8.3:21471137-21471156 | None:intergenic | 35.0% | |
| CTTTCAAAAGCCAAAAGGAT+TGG | + | chr8.3:21471219-21471238 | MS.gene72379:intron | 35.0% | |
| GAAAATGATGAGGAGTAACT+TGG | - | chr8.3:21469748-21469767 | None:intergenic | 35.0% | |
| GAGAAAGTAAAGAGAGGTTA+AGG | - | chr8.3:21469930-21469949 | None:intergenic | 35.0% | |
| GAGCTTAAATTCTGGATCTT+GGG | + | chr8.3:21470120-21470139 | MS.gene72379:CDS | 35.0% | |
| GAGTTCATACTTGCAATGAT+GGG | + | chr8.3:21470416-21470435 | MS.gene72379:CDS | 35.0% | |
| GCAAGGTAAATGAATCAAAC+AGG | - | chr8.3:21471040-21471059 | None:intergenic | 35.0% | |
| GCTGAACTTGTAAAAGTGAT+TGG | - | chr8.3:21471062-21471081 | None:intergenic | 35.0% | |
| GCTGCAAACACTTAATTAAG+TGG | + | chr8.3:21472475-21472494 | MS.gene72379:intron | 35.0% | |
| GGAGTCTATCAATTTCAGAA+TGG | + | chr8.3:21471734-21471753 | MS.gene72379:CDS | 35.0% | |
| GTATACCAAATACTGAATCG+TGG | - | chr8.3:21471261-21471280 | None:intergenic | 35.0% | |
| GTCAATTAAAATAAGCCCTC+AGG | - | chr8.3:21472230-21472249 | None:intergenic | 35.0% | |
| GTGATGTTTATACTGGTGAA+TGG | + | chr8.3:21470368-21470387 | MS.gene72379:CDS | 35.0% | |
| GTTCCTTAGCATTATCAGAA+TGG | + | chr8.3:21470545-21470564 | MS.gene72379:intron | 35.0% | |
| TATACTGGTGAATGGTGTAA+TGG | + | chr8.3:21470376-21470395 | MS.gene72379:CDS | 35.0% | |
| TATGTTGGGGAATTCAAATG+GGG | + | chr8.3:21470445-21470464 | MS.gene72379:CDS | 35.0% | |
| TCAACGATCTTGAGAAGAAT+AGG | - | chr8.3:21470024-21470043 | None:intergenic | 35.0% | |
| TGTTCATGGTGAAAATGATG+AGG | - | chr8.3:21469758-21469777 | None:intergenic | 35.0% | |
| TGTTGTTGGCATTGTTTGTT+CGG | - | chr8.3:21471123-21471142 | None:intergenic | 35.0% | |
| TTCTTTGTTAAGTGTGGACT+TGG | + | chr8.3:21470579-21470598 | MS.gene72379:intron | 35.0% | |
| TTTGAAGGTGATTGGATTGA+TGG | + | chr8.3:21470238-21470257 | MS.gene72379:CDS | 35.0% | |
| ! | AATGATGGGAGTCATTATGT+TGG | + | chr8.3:21470430-21470449 | MS.gene72379:CDS | 35.0% |
| ! | AGCAATGGTGATGTTTATGA+AGG | + | chr8.3:21470154-21470173 | MS.gene72379:CDS | 35.0% |
| ! | ATATGCCGGAGAATATTTTG+CGG | + | chr8.3:21471694-21471713 | MS.gene72379:CDS | 35.0% |
| ! | ATGATGGGAGTCATTATGTT+GGG | + | chr8.3:21470431-21470450 | MS.gene72379:CDS | 35.0% |
| ! | CGGCGATATTTATTTAGCTT+TGG | + | chr8.3:21471081-21471100 | MS.gene72379:intron | 35.0% |
| ! | CTCAAATTTTCAACAACCTG+TGG | + | chr8.3:21471006-21471025 | MS.gene72379:intron | 35.0% |
| ! | CTGACTTCAATCTGAAGTAT+TGG | + | chr8.3:21470874-21470893 | MS.gene72379:intron | 35.0% |
| ! | GGATTGATGGAAAGTATGAT+GGG | + | chr8.3:21470251-21470270 | MS.gene72379:CDS | 35.0% |
| ! | GGTATACTTTTCTGCTTTCA+TGG | + | chr8.3:21471274-21471293 | MS.gene72379:intron | 35.0% |
| ! | TATTTTGCGGATATGATGCA+TGG | + | chr8.3:21471707-21471726 | MS.gene72379:CDS | 35.0% |
| ! | TGGATTGATGGAAAGTATGA+TGG | + | chr8.3:21470250-21470269 | MS.gene72379:CDS | 35.0% |
| ! | TTCAAATGGGGTGTTAAACA+TGG | + | chr8.3:21470457-21470476 | MS.gene72379:CDS | 35.0% |
| !! | GTCCAGGTAATAGTCATTTT+TGG | + | chr8.3:21471935-21471954 | MS.gene72379:intron | 35.0% |
| !! | GTGTTAAACATGGATTAGGA+CGG | + | chr8.3:21470467-21470486 | MS.gene72379:CDS | 35.0% |
| !! | TTTGGTGGTGATGTTTATAC+TGG | + | chr8.3:21470361-21470380 | MS.gene72379:CDS | 35.0% |
| !!! | GGAACTTATAGGTTTTTTGG+TGG | + | chr8.3:21470346-21470365 | MS.gene72379:CDS | 35.0% |
| !!! | GTTTTGGTTAAGTGTACTTC+TGG | + | chr8.3:21470676-21470695 | MS.gene72379:intron | 35.0% |
| ACTGTATCCGTGCAAGAATA+TGG | + | chr8.3:21471481-21471500 | MS.gene72379:intron | 40.0% | |
| AGAAATGGGGACATATATGC+CGG | + | chr8.3:21471680-21471699 | MS.gene72379:intron | 40.0% | |
| AGCTGTCGAAGCTAATTTCA+AGG | - | chr8.3:21471629-21471648 | None:intergenic | 40.0% | |
| AGTCAGATTGAATGCATGTC+TGG | - | chr8.3:21470860-21470879 | None:intergenic | 40.0% | |
| ATCCTTCTTTGACATTCCGT+AGG | - | chr8.3:21472592-21472611 | None:intergenic | 40.0% | |
| ATGGCAACACCAAAGATACA+AGG | - | chr8.3:21472094-21472113 | None:intergenic | 40.0% | |
| ATGTCCATCACGAATCATGA+TGG | - | chr8.3:21472113-21472132 | None:intergenic | 40.0% | |
| CAACGTGTTGTATGGTCAAT+TGG | + | chr8.3:21470076-21470095 | MS.gene72379:CDS | 40.0% | |
| CTCATCATCAACGTGTTGTA+TGG | + | chr8.3:21470068-21470087 | MS.gene72379:CDS | 40.0% | |
| GGAGTTCATACTTGCAATGA+TGG | + | chr8.3:21470415-21470434 | MS.gene72379:CDS | 40.0% | |
| GGCATGGAATTGGAACTTAT+AGG | + | chr8.3:21470335-21470354 | MS.gene72379:CDS | 40.0% | |
| GTGGAAGATTTGAAGGTGAT+TGG | + | chr8.3:21470230-21470249 | MS.gene72379:CDS | 40.0% | |
| GTTAAGTGTGGACTTGGATT+AGG | + | chr8.3:21470585-21470604 | MS.gene72379:intron | 40.0% | |
| TACTTTCTACTTGGGCTTTC+TGG | + | chr8.3:21472190-21472209 | MS.gene72379:intron | 40.0% | |
| TATCGTGGACAGTATAGGAA+GGG | + | chr8.3:21470307-21470326 | MS.gene72379:CDS | 40.0% | |
| TGATGGGAGTCATTATGTTG+GGG | + | chr8.3:21470432-21470451 | MS.gene72379:CDS | 40.0% | |
| TGTATGGTCAATTGGGTCAA+AGG | + | chr8.3:21470084-21470103 | MS.gene72379:CDS | 40.0% | |
| TGTCGAAGCTAATTTCAAGG+AGG | - | chr8.3:21471626-21471645 | None:intergenic | 40.0% | |
| TGTGGCTTTCCTTGTATCTT+TGG | + | chr8.3:21472082-21472101 | MS.gene72379:intron | 40.0% | |
| TTGTGTGTAGGTGTATGAGA+TGG | - | chr8.3:21469809-21469828 | None:intergenic | 40.0% | |
| ! | AGAAACTAGGCCAATCCTTT+TGG | - | chr8.3:21471232-21471251 | None:intergenic | 40.0% |
| ! | ATAAGCCCTCAGGTTGTTTA+AGG | - | chr8.3:21472220-21472239 | None:intergenic | 40.0% |
| ! | TGGGGTGTTAAACATGGATT+AGG | + | chr8.3:21470463-21470482 | MS.gene72379:CDS | 40.0% |
| ! | TGGGTTCAAGTTTACAGCAA+TGG | + | chr8.3:21470139-21470158 | MS.gene72379:CDS | 40.0% |
| !! | GATGGAAAGTATGATGGGTT+TGG | + | chr8.3:21470256-21470275 | MS.gene72379:CDS | 40.0% |
| !!! | TGATGGGTTTTGTTGTGTGT+AGG | - | chr8.3:21469821-21469840 | None:intergenic | 40.0% |
| AATGGTCAGTGTCATGGCTT+TGG | + | chr8.3:21470394-21470413 | MS.gene72379:CDS | 45.0% | |
| AGCCTACGGAATGTCAAAGA+AGG | + | chr8.3:21472587-21472606 | MS.gene72379:CDS | 45.0% | |
| CAGAATGGTCACCGATATGA+GGG | + | chr8.3:21471749-21471768 | MS.gene72379:CDS | 45.0% | |
| GAAGGAAGAAGACAAGGACT+GGG | + | chr8.3:21471782-21471801 | MS.gene72379:CDS | 45.0% | |
| GACAGTATAGGAAGGGTTTG+AGG | + | chr8.3:21470314-21470333 | MS.gene72379:CDS | 45.0% | |
| GATTAGGACGGTACCATTTC+AGG | + | chr8.3:21470479-21470498 | MS.gene72379:CDS | 45.0% | |
| GGTGTATGAGATGGTGAAGA+TGG | - | chr8.3:21469800-21469819 | None:intergenic | 45.0% | |
| GTATCGTGGACAGTATAGGA+AGG | + | chr8.3:21470306-21470325 | MS.gene72379:CDS | 45.0% | |
| GTCAATTGGGTCAAAGGATG+AGG | + | chr8.3:21470090-21470109 | MS.gene72379:CDS | 45.0% | |
| GTGGACCTTAAACAACCTGA+GGG | + | chr8.3:21472212-21472231 | MS.gene72379:intron | 45.0% | |
| GTTGCCATCATGATTCGTGA+TGG | + | chr8.3:21472106-21472125 | MS.gene72379:intron | 45.0% | |
| TCAGAATGGTCACCGATATG+AGG | + | chr8.3:21471748-21471767 | MS.gene72379:CDS | 45.0% | |
| TGAACAGGATGCTCATTGTG+CGG | + | chr8.3:21472557-21472576 | MS.gene72379:intron | 45.0% | |
| TGAAGGAAGAAGACAAGGAC+TGG | + | chr8.3:21471781-21471800 | MS.gene72379:CDS | 45.0% | |
| TGGCATGAAGGAAGAAGACA+AGG | + | chr8.3:21471776-21471795 | MS.gene72379:CDS | 45.0% | |
| TGGTGTAATGGTCAGTGTCA+TGG | + | chr8.3:21470388-21470407 | MS.gene72379:CDS | 45.0% | |
| TGTCAATGTCAAGTCGGTGT+CGG | + | chr8.3:21470831-21470850 | MS.gene72379:intron | 45.0% | |
| TTTCTACTTGGGCTTTCTGG+TGG | + | chr8.3:21472193-21472212 | MS.gene72379:intron | 45.0% | |
| ! | AAGGGTTTGAGGCATGGAAT+TGG | + | chr8.3:21470325-21470344 | MS.gene72379:CDS | 45.0% |
| ! | CAAGGTTTTCAAAGCTGTCC+AGG | + | chr8.3:21471919-21471938 | MS.gene72379:CDS | 45.0% |
| ! | GTAGGTATCGTGGACAGTAT+AGG | + | chr8.3:21470302-21470321 | MS.gene72379:CDS | 45.0% |
| ! | TATAGGAAGGGTTTGAGGCA+TGG | + | chr8.3:21470319-21470338 | MS.gene72379:CDS | 45.0% |
| ! | TTCTGGTTGTTTGATGCAGC+AGG | + | chr8.3:21470693-21470712 | MS.gene72379:intron | 45.0% |
| !! | ATGGGTTTGGTGTTGAAACG+TGG | + | chr8.3:21470269-21470288 | MS.gene72379:CDS | 45.0% |
| !! | CAGCTTTGAAAACCTTGGCA+TGG | - | chr8.3:21471916-21471935 | None:intergenic | 45.0% |
| !! | CTGGACAGCTTTGAAAACCT+TGG | - | chr8.3:21471921-21471940 | None:intergenic | 45.0% |
| !! | TGCTTGAGAAGCGTTGTTCA+TGG | - | chr8.3:21469772-21469791 | None:intergenic | 45.0% |
| !! | TGGGTTTGGTGTTGAAACGT+GGG | + | chr8.3:21470270-21470289 | MS.gene72379:CDS | 45.0% |
| !! | TTCATAAGGGGAAGTGCTCA+GGG | + | chr8.3:21470182-21470201 | MS.gene72379:CDS | 45.0% |
| !! | TTTCATAAGGGGAAGTGCTC+AGG | + | chr8.3:21470181-21470200 | MS.gene72379:CDS | 45.0% |
| !!! | ATTACTTTTTATAAATTAAA+AGG | + | chr8.3:21472025-21472044 | MS.gene72379:intron | 5.0% |
| !!! | TTACTTTTTATAAATTAAAA+GGG | + | chr8.3:21472026-21472045 | MS.gene72379:intron | 5.0% |
| AGAAACGGGGAAACACAGTG+TGG | + | chr8.3:21471818-21471837 | MS.gene72379:CDS | 50.0% | |
| AGCTAGAGTTGCAGCTGTGA+AGG | + | chr8.3:21472659-21472678 | MS.gene72379:CDS | 50.0% | |
| AGTGTGGTCACTGGCAGAAT+GGG | + | chr8.3:21471834-21471853 | MS.gene72379:CDS | 50.0% | |
| ATGTGCTGTAGACCATGCCA+AGG | + | chr8.3:21471901-21471920 | MS.gene72379:CDS | 50.0% | |
| CAAACAGGTGCTTCAACCAC+AGG | - | chr8.3:21471025-21471044 | None:intergenic | 50.0% | |
| GCGGATATGATGCATGGCTT+TGG | + | chr8.3:21471713-21471732 | MS.gene72379:CDS | 50.0% | |
| GGTGGACCTTAAACAACCTG+AGG | + | chr8.3:21472211-21472230 | MS.gene72379:intron | 50.0% | |
| TTGGCATGGTCTACAGCACA+TGG | - | chr8.3:21471902-21471921 | None:intergenic | 50.0% | |
| ! | GCTAGAGGAAGTAGGTATCG+TGG | + | chr8.3:21470292-21470311 | MS.gene72379:CDS | 50.0% |
| !! | AAACGTGGGCTAGAGGAAGT+AGG | + | chr8.3:21470284-21470303 | MS.gene72379:CDS | 50.0% |
| ACAGGATGCTCATTGTGCGG+CGG | + | chr8.3:21472560-21472579 | MS.gene72379:intron | 55.0% | |
| CAGTGTGGTCACTGGCAGAA+TGG | + | chr8.3:21471833-21471852 | MS.gene72379:CDS | 55.0% | |
| CATGCCACGCACCCTCATAT+CGG | - | chr8.3:21471763-21471782 | None:intergenic | 55.0% | |
| GGGAAACACAGTGTGGTCAC+TGG | + | chr8.3:21471825-21471844 | MS.gene72379:CDS | 55.0% | |
| ! | TATGAGGGTGCGTGGCATGA+AGG | + | chr8.3:21471764-21471783 | MS.gene72379:CDS | 55.0% |
| !! | GGTGTTGAAACGTGGGCTAG+AGG | + | chr8.3:21470277-21470296 | MS.gene72379:CDS | 55.0% |
| TGTGCGGCGGAGAAAGCCTA+CGG | + | chr8.3:21472573-21472592 | MS.gene72379:CDS | 60.0% | |
| ! | GTCACCGATATGAGGGTGCG+TGG | + | chr8.3:21471756-21471775 | MS.gene72379:CDS | 60.0% |
| !! | AAGGGGAAGTGCTCAGGGAG+TGG | + | chr8.3:21470187-21470206 | MS.gene72379:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 21469665 | 21472722 | 21469665 | ID=MS.gene72379 |
| chr8.3 | mRNA | 21469665 | 21472722 | 21469665 | ID=MS.gene72379.t1;Parent=MS.gene72379 |
| chr8.3 | exon | 21469665 | 21470500 | 21469665 | ID=MS.gene72379.t1.exon1;Parent=MS.gene72379.t1 |
| chr8.3 | CDS | 21469665 | 21470500 | 21469665 | ID=cds.MS.gene72379.t1;Parent=MS.gene72379.t1 |
| chr8.3 | exon | 21471682 | 21471940 | 21471682 | ID=MS.gene72379.t1.exon2;Parent=MS.gene72379.t1 |
| chr8.3 | CDS | 21471682 | 21471940 | 21471682 | ID=cds.MS.gene72379.t1;Parent=MS.gene72379.t1 |
| chr8.3 | exon | 21472564 | 21472722 | 21472564 | ID=MS.gene72379.t1.exon3;Parent=MS.gene72379.t1 |
| chr8.3 | CDS | 21472564 | 21472722 | 21472564 | ID=cds.MS.gene72379.t1;Parent=MS.gene72379.t1 |
| Gene Sequence |
| Protein sequence |
