Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75523.t1 | XP_003601900.1 | 88.9 | 180 | 11 | 3 | 30 | 209 | 24 | 194 | 9.40E-82 | 313.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75523.t1 | Q9FXE3 | 49.2 | 181 | 89 | 3 | 30 | 209 | 31 | 209 | 3.4e-40 | 166.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75523.t1 | G7J358 | 88.9 | 180 | 11 | 3 | 30 | 209 | 24 | 194 | 6.8e-82 | 313.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene75523 | -0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene75523 | 0.814862 | 1.24E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene75523 | -0.843162 | 1.66E-58 | -1.69E-46 |
| MS.gene050380 | MS.gene75523 | 0.810849 | 9.40E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene75523 | 0.851654 | 7.71E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene75523 | -0.800134 | 1.66E-48 | -1.69E-46 |
| MS.gene050612 | MS.gene75523 | -0.80228 | 6.05E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene75523 | -0.814752 | 1.31E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene75523 | -0.813449 | 2.55E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene75523 | 0.807841 | 4.15E-50 | -1.69E-46 |
| MS.gene05141 | MS.gene75523 | 0.815073 | 1.11E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene75523 | 0.849489 | 3.13E-60 | -1.69E-46 |
| MS.gene054708 | MS.gene75523 | 0.814837 | 1.26E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene75523 | -0.801604 | 8.33E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene75523 | 0.812054 | 5.14E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene75523 | 0.822568 | 2.21E-53 | -1.69E-46 |
| MS.gene055202 | MS.gene75523 | 0.801759 | 7.74E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene75523 | -0.808642 | 2.80E-50 | -1.69E-46 |
| MS.gene056311 | MS.gene75523 | 0.807555 | 4.77E-50 | -1.69E-46 |
| MS.gene056313 | MS.gene75523 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene75523 | -0.805027 | 1.63E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene75523 | 0.827002 | 1.99E-54 | -1.69E-46 |
| MS.gene058171 | MS.gene75523 | 0.808888 | 2.48E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene75523 | 0.809843 | 1.55E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene75523 | -0.801531 | 8.62E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene75523 | 0.825618 | 4.25E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene75523 | -0.806512 | 7.93E-50 | -1.69E-46 |
| MS.gene059682 | MS.gene75523 | 0.808797 | 2.60E-50 | -1.69E-46 |
| MS.gene059690 | MS.gene75523 | 0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene059691 | MS.gene75523 | 0.809576 | 1.77E-50 | -1.69E-46 |
| MS.gene059694 | MS.gene75523 | 0.81357 | 2.39E-51 | -1.69E-46 |
| MS.gene059697 | MS.gene75523 | 0.816679 | 4.88E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene75523 | -0.836356 | 9.82E-57 | -1.69E-46 |
| MS.gene06074 | MS.gene75523 | 0.808858 | 2.52E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75523.t1 | MTR_3g086590 | 90.431 | 209 | 5 | 4 | 1 | 209 | 1 | 194 | 2.59e-133 | 372 |
| MS.gene75523.t1 | MTR_4g104680 | 58.519 | 135 | 54 | 2 | 75 | 209 | 58 | 190 | 1.43e-47 | 166 |
| MS.gene75523.t1 | MTR_1g047990 | 34.109 | 129 | 82 | 1 | 75 | 203 | 78 | 203 | 9.36e-17 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75523.t1 | AT1G67810 | 51.064 | 188 | 84 | 5 | 25 | 209 | 27 | 209 | 1.13e-56 | 180 |
| MS.gene75523.t1 | AT5G50210 | 48.889 | 135 | 67 | 1 | 75 | 209 | 87 | 219 | 1.55e-37 | 138 |
| MS.gene75523.t1 | AT4G26500 | 35.659 | 129 | 80 | 1 | 75 | 203 | 86 | 211 | 1.82e-16 | 77.0 |
Find 69 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACAAAGGATTTAATTTA+AGG | 0.108182 | 3.3:+72266697 | MS.gene75523:CDS |
| GAGAAGGAGGGAGGGTTAAT+AGG | 0.172032 | 3.3:-72266138 | None:intergenic |
| AACCCGGTCGGACCGGTCTA+AGG | 0.264863 | 3.3:-72266401 | None:intergenic |
| ATAATGTTAAAGCACGTTCT+AGG | 0.299172 | 3.3:+72266635 | MS.gene75523:CDS |
| CAGGTTGTTCGACAGATGTT+TGG | 0.324183 | 3.3:+72266440 | MS.gene75523:CDS |
| AGAAGGAGGGAGGGTTAATA+GGG | 0.328208 | 3.3:-72266137 | None:intergenic |
| GGTTCTGTTGGTGTCTTGTT+TGG | 0.336055 | 3.3:+72266533 | MS.gene75523:CDS |
| AACGGCGGCGGCGTTAAGTT+TGG | 0.345006 | 3.3:-72266182 | None:intergenic |
| TAACGTCGAGAAAGATGTTT+TGG | 0.349720 | 3.3:+72266588 | MS.gene75523:CDS |
| AGACCGGTCCGACCGGGTTC+CGG | 0.370178 | 3.3:+72266405 | MS.gene75523:CDS |
| CTCCCTTAGACCGGTCCGAC+CGG | 0.409468 | 3.3:+72266398 | MS.gene75523:CDS |
| CCGACCGGGTTCCGGAGAAC+CGG | 0.419653 | 3.3:+72266413 | MS.gene75523:CDS |
| TTGGTTGGTATGAATGTAGT+AGG | 0.419990 | 3.3:+72266607 | MS.gene75523:CDS |
| CAACCTGTCACCCGGTTCTC+CGG | 0.423018 | 3.3:-72266424 | None:intergenic |
| GTTGAAGGGAGGAGGGTTAA+CGG | 0.424094 | 3.3:-72266233 | None:intergenic |
| GTTGGGAATGGAAATGGAAA+TGG | 0.446723 | 3.3:-72266097 | None:intergenic |
| AGGTTGTTCGACAGATGTTT+GGG | 0.451276 | 3.3:+72266441 | MS.gene75523:CDS |
| TGTCTTGTTTGGATGTTTGA+CGG | 0.452263 | 3.3:+72266544 | MS.gene75523:CDS |
| AAGGAGAAGGAGAAGGAGGG+AGG | 0.455202 | 3.3:-72266147 | None:intergenic |
| TGAGAAGGAGAAGGAGAAGG+AGG | 0.464083 | 3.3:-72266151 | None:intergenic |
| GTTCCGGAGAACCGGGTGAC+AGG | 0.466591 | 3.3:+72266421 | MS.gene75523:CDS |
| GTGGAACTTGCCGTAGAAGT+TGG | 0.470590 | 3.3:-72266115 | None:intergenic |
| GTAGAAGTTGGGAATGGAAA+TGG | 0.471303 | 3.3:-72266103 | None:intergenic |
| TGGTTGGTATGAATGTAGTA+GGG | 0.480747 | 3.3:+72266608 | MS.gene75523:CDS |
| AGGAGAAGGAGAAGGAGGGA+GGG | 0.480933 | 3.3:-72266146 | None:intergenic |
| TCTCCTACCTTTGTCTATGC+GGG | 0.481076 | 3.3:-72266470 | None:intergenic |
| TGGAACTTGCCGTAGAAGTT+GGG | 0.482966 | 3.3:-72266114 | None:intergenic |
| ATTTCCATTCCCAACTTCTA+CGG | 0.492903 | 3.3:+72266105 | MS.gene75523:CDS |
| TCTCCGGAACCCGGTCGGAC+CGG | 0.495621 | 3.3:-72266408 | None:intergenic |
| CTTTATTGCCTCCCTTAGAC+CGG | 0.497345 | 3.3:+72266389 | MS.gene75523:CDS |
| TCGACGTTAAGCACTTCCTC+AGG | 0.504341 | 3.3:-72266574 | None:intergenic |
| TTCGACAGATGTTTGGGTGG+TGG | 0.504447 | 3.3:+72266447 | MS.gene75523:CDS |
| TCCCTTAGACCGGTCCGACC+GGG | 0.506418 | 3.3:+72266399 | MS.gene75523:CDS |
| AATGTGTTGTTGAAGGGAGG+AGG | 0.512295 | 3.3:-72266241 | None:intergenic |
| ATGTGTTGTTGAAGGGAGGA+GGG | 0.516128 | 3.3:-72266240 | None:intergenic |
| GAGAAGGAGAAGGAGAAGGA+GGG | 0.521011 | 3.3:-72266150 | None:intergenic |
| GTTTCAAGCAGACAGCGATT+CGG | 0.525213 | 3.3:+72266498 | MS.gene75523:CDS |
| GATGTTAATGTGTTGTTGAA+GGG | 0.535061 | 3.3:-72266247 | None:intergenic |
| TTCTCCTACCTTTGTCTATG+CGG | 0.535727 | 3.3:-72266471 | None:intergenic |
| GGCGGCGGCGTTAAGTTTGG+AGG | 0.536844 | 3.3:-72266179 | None:intergenic |
| CGACCGGGTTCCGGAGAACC+GGG | 0.537863 | 3.3:+72266414 | MS.gene75523:CDS |
| TGATGTTAATGTGTTGTTGA+AGG | 0.542600 | 3.3:-72266248 | None:intergenic |
| AGGAGGGAGGGTTAATAGGG+TGG | 0.544493 | 3.3:-72266134 | None:intergenic |
| AAATGAGAAGGAGAAGGAGA+AGG | 0.545044 | 3.3:-72266154 | None:intergenic |
| ACCCGGTCGGACCGGTCTAA+GGG | 0.546406 | 3.3:-72266400 | None:intergenic |
| AGTTTGGAGGAGAAATGAGA+AGG | 0.551683 | 3.3:-72266166 | None:intergenic |
| TCATCATCACCGTCATCTCA+CGG | 0.561395 | 3.3:+72266277 | MS.gene75523:CDS |
| GTTTGACGGCGCGGAGCCTG+AGG | 0.562974 | 3.3:+72266558 | MS.gene75523:CDS |
| TCACCCGGTTCTCCGGAACC+CGG | 0.567326 | 3.3:-72266417 | None:intergenic |
| GAGGAGAAATGAGAAGGAGA+AGG | 0.570126 | 3.3:-72266160 | None:intergenic |
| CTGTCGAACAACCTGTCACC+CGG | 0.571190 | 3.3:-72266432 | None:intergenic |
| GGTTAACGGAGAGTTTGAGA+TGG | 0.571772 | 3.3:-72266219 | None:intergenic |
| TAGACAAAGGTAGGAGAATG+AGG | 0.573501 | 3.3:+72266476 | MS.gene75523:CDS |
| AGATATCGAAGGGGTTCTGT+TGG | 0.579062 | 3.3:+72266521 | MS.gene75523:CDS |
| GTCGATGGGTTCGGAGAGAG+AGG | 0.581664 | 3.3:-72266338 | None:intergenic |
| CCGGTTCTCCGGAACCCGGT+CGG | 0.599576 | 3.3:-72266413 | None:intergenic |
| AGCGATTCGGAGATATCGAA+GGG | 0.599661 | 3.3:+72266511 | MS.gene75523:CDS |
| CAGCGATTCGGAGATATCGA+AGG | 0.616023 | 3.3:+72266510 | MS.gene75523:CDS |
| GGAGAGAGAGGCAAATTCGA+TGG | 0.622274 | 3.3:-72266326 | None:intergenic |
| CTTGCCGTAGAAGTTGGGAA+TGG | 0.632430 | 3.3:-72266109 | None:intergenic |
| TTGTTCGACAGATGTTTGGG+TGG | 0.634015 | 3.3:+72266444 | MS.gene75523:CDS |
| TGGCCCGCATAGACAAAGGT+AGG | 0.636995 | 3.3:+72266467 | MS.gene75523:CDS |
| CGGTCGGACCGGTCTAAGGG+AGG | 0.638651 | 3.3:-72266397 | None:intergenic |
| GTTAATGTGTTGTTGAAGGG+AGG | 0.644344 | 3.3:-72266244 | None:intergenic |
| GTGGTGGCCCGCATAGACAA+AGG | 0.655112 | 3.3:+72266463 | MS.gene75523:CDS |
| TCAGTGACACCGTGAGATGA+CGG | 0.694277 | 3.3:-72266286 | None:intergenic |
| TGTTTGGATGTTTGACGGCG+CGG | 0.699310 | 3.3:+72266549 | MS.gene75523:CDS |
| CACGTTCTAGGATTAACACG+TGG | 0.721590 | 3.3:+72266647 | MS.gene75523:CDS |
| GCGATTCGGAGATATCGAAG+GGG | 0.771683 | 3.3:+72266512 | MS.gene75523:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTAATAGTCTTTTTACT+CGG | - | chr3.3:72266363-72266382 | None:intergenic | 20.0% |
| !!! | ATGGATTTGTTTTGAAGTAA+CGG | - | chr3.3:72266203-72266222 | None:intergenic | 25.0% |
| ATAATGTTAAAGCACGTTCT+AGG | + | chr3.3:72266635-72266654 | MS.gene75523:CDS | 30.0% | |
| ! | GATGTTAATGTGTTGTTGAA+GGG | - | chr3.3:72266250-72266269 | None:intergenic | 30.0% |
| ! | TGATGTTAATGTGTTGTTGA+AGG | - | chr3.3:72266251-72266270 | None:intergenic | 30.0% |
| ATTTCCATTCCCAACTTCTA+CGG | + | chr3.3:72266105-72266124 | MS.gene75523:CDS | 35.0% | |
| ! | ATCCTTTGTAGCTTTTTGCA+TGG | - | chr3.3:72266689-72266708 | None:intergenic | 35.0% |
| ! | TAACGTCGAGAAAGATGTTT+TGG | + | chr3.3:72266588-72266607 | MS.gene75523:CDS | 35.0% |
| ! | TGGTTGGTATGAATGTAGTA+GGG | + | chr3.3:72266608-72266627 | MS.gene75523:CDS | 35.0% |
| ! | TTGGTTGGTATGAATGTAGT+AGG | + | chr3.3:72266607-72266626 | MS.gene75523:CDS | 35.0% |
| !! | TGTCTTGTTTGGATGTTTGA+CGG | + | chr3.3:72266544-72266563 | MS.gene75523:CDS | 35.0% |
| !!! | GATTTGTTTTGAAGTAACGG+CGG | - | chr3.3:72266200-72266219 | None:intergenic | 35.0% |
| AAATGAGAAGGAGAAGGAGA+AGG | - | chr3.3:72266157-72266176 | None:intergenic | 40.0% | |
| AGGTTGTTCGACAGATGTTT+GGG | + | chr3.3:72266441-72266460 | MS.gene75523:CDS | 40.0% | |
| AGTTTGGAGGAGAAATGAGA+AGG | - | chr3.3:72266169-72266188 | None:intergenic | 40.0% | |
| GTAGAAGTTGGGAATGGAAA+TGG | - | chr3.3:72266106-72266125 | None:intergenic | 40.0% | |
| GTTGGGAATGGAAATGGAAA+TGG | - | chr3.3:72266100-72266119 | None:intergenic | 40.0% | |
| TAGACAAAGGTAGGAGAATG+AGG | + | chr3.3:72266476-72266495 | MS.gene75523:CDS | 40.0% | |
| TGCCATGCAAAAAGCTACAA+AGG | + | chr3.3:72266684-72266703 | MS.gene75523:CDS | 40.0% | |
| TTCTCCTACCTTTGTCTATG+CGG | - | chr3.3:72266474-72266493 | None:intergenic | 40.0% | |
| ! | AGTCTTTTTACTCGGTCGAT+GGG | - | chr3.3:72266355-72266374 | None:intergenic | 40.0% |
| ! | GTTAATGTGTTGTTGAAGGG+AGG | - | chr3.3:72266247-72266266 | None:intergenic | 40.0% |
| ! | TAGTCTTTTTACTCGGTCGA+TGG | - | chr3.3:72266356-72266375 | None:intergenic | 40.0% |
| !!! | GTCGAGAAAGATGTTTTGGT+TGG | + | chr3.3:72266592-72266611 | MS.gene75523:CDS | 40.0% |
| AGAAGGAGGGAGGGTTAATA+GGG | - | chr3.3:72266140-72266159 | None:intergenic | 45.0% | |
| AGATATCGAAGGGGTTCTGT+TGG | + | chr3.3:72266521-72266540 | MS.gene75523:CDS | 45.0% | |
| CAGGTTGTTCGACAGATGTT+TGG | + | chr3.3:72266440-72266459 | MS.gene75523:CDS | 45.0% | |
| CTTTATTGCCTCCCTTAGAC+CGG | + | chr3.3:72266389-72266408 | MS.gene75523:CDS | 45.0% | |
| GAGGAGAAATGAGAAGGAGA+AGG | - | chr3.3:72266163-72266182 | None:intergenic | 45.0% | |
| GGTTAACGGAGAGTTTGAGA+TGG | - | chr3.3:72266222-72266241 | None:intergenic | 45.0% | |
| GTTTCAAGCAGACAGCGATT+CGG | + | chr3.3:72266498-72266517 | MS.gene75523:CDS | 45.0% | |
| TCATCATCACCGTCATCTCA+CGG | + | chr3.3:72266277-72266296 | MS.gene75523:CDS | 45.0% | |
| TCTCCTACCTTTGTCTATGC+GGG | - | chr3.3:72266473-72266492 | None:intergenic | 45.0% | |
| TGGAACTTGCCGTAGAAGTT+GGG | - | chr3.3:72266117-72266136 | None:intergenic | 45.0% | |
| TTGTTCGACAGATGTTTGGG+TGG | + | chr3.3:72266444-72266463 | MS.gene75523:CDS | 45.0% | |
| ! | AATGTGTTGTTGAAGGGAGG+AGG | - | chr3.3:72266244-72266263 | None:intergenic | 45.0% |
| ! | AGCGATTCGGAGATATCGAA+GGG | + | chr3.3:72266511-72266530 | MS.gene75523:CDS | 45.0% |
| ! | ATGTGTTGTTGAAGGGAGGA+GGG | - | chr3.3:72266243-72266262 | None:intergenic | 45.0% |
| ! | GGTTCTGTTGGTGTCTTGTT+TGG | + | chr3.3:72266533-72266552 | MS.gene75523:CDS | 45.0% |
| !! | CACGTTCTAGGATTAACACG+TGG | + | chr3.3:72266647-72266666 | MS.gene75523:CDS | 45.0% |
| !! | TTTTACTCGGTCGATGGGTT+CGG | - | chr3.3:72266350-72266369 | None:intergenic | 45.0% |
| !!! | TTGTTTTGAAGTAACGGCGG+CGG | - | chr3.3:72266197-72266216 | None:intergenic | 45.0% |
| CTTGCCGTAGAAGTTGGGAA+TGG | - | chr3.3:72266112-72266131 | None:intergenic | 50.0% | |
| GAGAAGGAGAAGGAGAAGGA+GGG | - | chr3.3:72266153-72266172 | None:intergenic | 50.0% | |
| GAGAAGGAGGGAGGGTTAAT+AGG | - | chr3.3:72266141-72266160 | None:intergenic | 50.0% | |
| GGAGAGAGAGGCAAATTCGA+TGG | - | chr3.3:72266329-72266348 | None:intergenic | 50.0% | |
| GTGGAACTTGCCGTAGAAGT+TGG | - | chr3.3:72266118-72266137 | None:intergenic | 50.0% | |
| GTTGAAGGGAGGAGGGTTAA+CGG | - | chr3.3:72266236-72266255 | None:intergenic | 50.0% | |
| TCAGTGACACCGTGAGATGA+CGG | - | chr3.3:72266289-72266308 | None:intergenic | 50.0% | |
| TCGACGTTAAGCACTTCCTC+AGG | - | chr3.3:72266577-72266596 | None:intergenic | 50.0% | |
| TGAGAAGGAGAAGGAGAAGG+AGG | - | chr3.3:72266154-72266173 | None:intergenic | 50.0% | |
| TGTTTGGATGTTTGACGGCG+CGG | + | chr3.3:72266549-72266568 | MS.gene75523:CDS | 50.0% | |
| TTCGACAGATGTTTGGGTGG+TGG | + | chr3.3:72266447-72266466 | MS.gene75523:CDS | 50.0% | |
| ! | CAGCGATTCGGAGATATCGA+AGG | + | chr3.3:72266510-72266529 | MS.gene75523:CDS | 50.0% |
| ! | GCGATTCGGAGATATCGAAG+GGG | + | chr3.3:72266512-72266531 | MS.gene75523:CDS | 50.0% |
| AAGGAGAAGGAGAAGGAGGG+AGG | - | chr3.3:72266150-72266169 | None:intergenic | 55.0% | |
| AGGAGAAGGAGAAGGAGGGA+GGG | - | chr3.3:72266149-72266168 | None:intergenic | 55.0% | |
| AGGAGGGAGGGTTAATAGGG+TGG | - | chr3.3:72266137-72266156 | None:intergenic | 55.0% | |
| CTGTCGAACAACCTGTCACC+CGG | - | chr3.3:72266435-72266454 | None:intergenic | 55.0% | |
| TGGCCCGCATAGACAAAGGT+AGG | + | chr3.3:72266467-72266486 | MS.gene75523:CDS | 55.0% | |
| AACGGCGGCGGCGTTAAGTT+TGG | - | chr3.3:72266185-72266204 | None:intergenic | 60.0% | |
| CAACCTGTCACCCGGTTCTC+CGG | - | chr3.3:72266427-72266446 | None:intergenic | 60.0% | |
| GTGGTGGCCCGCATAGACAA+AGG | + | chr3.3:72266463-72266482 | MS.gene75523:CDS | 60.0% | |
| ! | GTCGATGGGTTCGGAGAGAG+AGG | - | chr3.3:72266341-72266360 | None:intergenic | 60.0% |
| AACCCGGTCGGACCGGTCTA+AGG | - | chr3.3:72266404-72266423 | None:intergenic | 65.0% | |
| ACCCGGTCGGACCGGTCTAA+GGG | - | chr3.3:72266403-72266422 | None:intergenic | 65.0% | |
| CTCCCTTAGACCGGTCCGAC+CGG | + | chr3.3:72266398-72266417 | MS.gene75523:CDS | 65.0% | |
| GGCGGCGGCGTTAAGTTTGG+AGG | - | chr3.3:72266182-72266201 | None:intergenic | 65.0% | |
| GTTCCGGAGAACCGGGTGAC+AGG | + | chr3.3:72266421-72266440 | MS.gene75523:CDS | 65.0% | |
| TCACCCGGTTCTCCGGAACC+CGG | - | chr3.3:72266420-72266439 | None:intergenic | 65.0% | |
| TCCCTTAGACCGGTCCGACC+GGG | + | chr3.3:72266399-72266418 | MS.gene75523:CDS | 65.0% | |
| AGACCGGTCCGACCGGGTTC+CGG | + | chr3.3:72266405-72266424 | MS.gene75523:CDS | 70.0% | |
| CCGACCGGGTTCCGGAGAAC+CGG | + | chr3.3:72266413-72266432 | MS.gene75523:CDS | 70.0% | |
| CCGGTTCTCCGGAACCCGGT+CGG | - | chr3.3:72266416-72266435 | None:intergenic | 70.0% | |
| CGACCGGGTTCCGGAGAACC+GGG | + | chr3.3:72266414-72266433 | MS.gene75523:CDS | 70.0% | |
| CGGTCGGACCGGTCTAAGGG+AGG | - | chr3.3:72266400-72266419 | None:intergenic | 70.0% | |
| GTTTGACGGCGCGGAGCCTG+AGG | + | chr3.3:72266558-72266577 | MS.gene75523:CDS | 70.0% | |
| TCTCCGGAACCCGGTCGGAC+CGG | - | chr3.3:72266411-72266430 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 72266088 | 72266717 | 72266088 | ID=MS.gene75523 |
| chr3.3 | mRNA | 72266088 | 72266717 | 72266088 | ID=MS.gene75523.t1;Parent=MS.gene75523 |
| chr3.3 | exon | 72266088 | 72266717 | 72266088 | ID=MS.gene75523.t1.exon1;Parent=MS.gene75523.t1 |
| chr3.3 | CDS | 72266088 | 72266717 | 72266088 | ID=cds.MS.gene75523.t1;Parent=MS.gene75523.t1 |
| Gene Sequence |
| Protein sequence |
