Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82777.t1 | XP_013450709.1 | 98.4 | 568 | 9 | 0 | 1 | 568 | 1 | 568 | 0.00E+00 | 1116.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82777.t1 | Q9LF46 | 78.8 | 565 | 116 | 2 | 4 | 568 | 12 | 572 | 3.8e-259 | 895.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82777.t1 | A0A072U4V2 | 98.4 | 568 | 9 | 0 | 1 | 568 | 1 | 568 | 0.0e+00 | 1116.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070492 | MS.gene82777 | PPI |
| MS.gene016742 | MS.gene82777 | PPI |
| MS.gene070510 | MS.gene82777 | PPI |
| MS.gene81622 | MS.gene82777 | PPI |
| MS.gene82777 | MS.gene070511 | PPI |
| MS.gene016743 | MS.gene82777 | PPI |
| MS.gene81617 | MS.gene82777 | PPI |
| MS.gene37911 | MS.gene82777 | PPI |
| MS.gene057883 | MS.gene82777 | PPI |
| MS.gene016758 | MS.gene82777 | PPI |
| MS.gene81620 | MS.gene82777 | PPI |
| MS.gene070505 | MS.gene82777 | PPI |
| MS.gene057886 | MS.gene82777 | PPI |
| MS.gene070509 | MS.gene82777 | PPI |
| MS.gene070503 | MS.gene82777 | PPI |
| MS.gene82777 | MS.gene67840 | PPI |
| MS.gene82777 | MS.gene09948 | PPI |
| MS.gene070507 | MS.gene82777 | PPI |
| MS.gene025787 | MS.gene82777 | PPI |
| MS.gene21145 | MS.gene82777 | PPI |
| MS.gene81615 | MS.gene82777 | PPI |
| MS.gene82777 | MS.gene015458 | PPI |
| MS.gene057884 | MS.gene82777 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82777.t1 | MTR_6g004200 | 98.415 | 568 | 9 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1146 |
| MS.gene82777.t1 | MTR_3g099190 | 26.724 | 580 | 356 | 20 | 6 | 553 | 80 | 622 | 1.15e-40 | 156 |
| MS.gene82777.t1 | MTR_2g027220 | 26.490 | 453 | 297 | 10 | 42 | 480 | 100 | 530 | 1.02e-39 | 153 |
| MS.gene82777.t1 | MTR_2g013120 | 25.203 | 492 | 326 | 12 | 6 | 480 | 84 | 550 | 5.91e-37 | 145 |
| MS.gene82777.t1 | MTR_2g015560 | 22.244 | 508 | 313 | 21 | 11 | 482 | 27 | 488 | 9.65e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82777.t1 | AT5G17380 | 78.975 | 566 | 113 | 3 | 4 | 568 | 12 | 572 | 0.0 | 917 |
| MS.gene82777.t1 | AT3G48560 | 26.069 | 491 | 323 | 11 | 6 | 480 | 99 | 565 | 3.18e-39 | 152 |
Find 181 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGATGCTATTTCGGAATT+TGG | 0.168057 | 6.1:+182550 | MS.gene82777:CDS |
| TTGAATTGGCTGCTTCATTT+TGG | 0.184186 | 6.1:+182247 | MS.gene82777:CDS |
| TCGACCTGGTGGTGTTTATT+TGG | 0.219372 | 6.1:+181859 | MS.gene82777:CDS |
| TAGGTTGGATGCTGGTACTT+GGG | 0.254929 | 6.1:+182660 | MS.gene82777:CDS |
| GAGAGGCCGTTGATTGTGTT+TGG | 0.282927 | 6.1:+182040 | MS.gene82777:CDS |
| GTTGCTGTTGAAGGGGATTC+TGG | 0.306147 | 6.1:+182748 | MS.gene82777:CDS |
| CACCGCGACCGACATCGTTT+TGG | 0.308872 | 6.1:-181715 | None:intergenic |
| TGGTGATGCTAAAGAAGTTT+TGG | 0.310510 | 6.1:+182363 | MS.gene82777:CDS |
| GTTGAAGGGGATTCTGGATA+TGG | 0.312883 | 6.1:+182754 | MS.gene82777:CDS |
| TTCAACAATGGTGGTGTATA+TGG | 0.321717 | 6.1:+184310 | MS.gene82777:CDS |
| TCCGGTCCCGGTTGCGTTCA+CGG | 0.331596 | 6.1:+181626 | MS.gene82777:CDS |
| TGAAGATGAATTGAAGAAAT+TGG | 0.345002 | 6.1:+182087 | MS.gene82777:CDS |
| CGCCTTGTCGTTGCTGTTGA+AGG | 0.349466 | 6.1:+182739 | MS.gene82777:CDS |
| TTCACATCCTTAGACCATTT+CGG | 0.350348 | 6.1:-182277 | None:intergenic |
| GGCGAGACCGTGAACGCAAC+CGG | 0.352550 | 6.1:-181633 | None:intergenic |
| GTGGGAAGGGTTATCTTGTT+GGG | 0.362279 | 6.1:+184440 | MS.gene82777:CDS |
| CTAGGTTGGATGCTGGTACT+TGG | 0.365720 | 6.1:+182659 | MS.gene82777:CDS |
| GGTGGGAAGGGTTATCTTGT+TGG | 0.370731 | 6.1:+184439 | MS.gene82777:CDS |
| GATTATCAGAGATGCTATTT+CGG | 0.371238 | 6.1:+182543 | MS.gene82777:CDS |
| TGCGACGCAATTCGGAATTT+CGG | 0.373872 | 6.1:-181810 | None:intergenic |
| CCGTTTCTTCCGACTCCAAT+GGG | 0.384443 | 6.1:+182127 | MS.gene82777:CDS |
| AGAGGCCGTTGATTGTGTTT+GGG | 0.386929 | 6.1:+182041 | MS.gene82777:CDS |
| GCGGCTAGGTCACTTGCTAT+TGG | 0.400777 | 6.1:+182190 | MS.gene82777:CDS |
| AAGAAATTGGTGGAAAGGAC+GGG | 0.406283 | 6.1:+182100 | MS.gene82777:CDS |
| AGGACCTGTGCGACGCAATT+CGG | 0.407068 | 6.1:-181818 | None:intergenic |
| AGAGCTGACTTTAGTTCAAC+AGG | 0.407449 | 6.1:-184466 | None:intergenic |
| CACACTATGATGGAAGCTTT+TGG | 0.408547 | 6.1:+184418 | MS.gene82777:CDS |
| GGTTAAAAGCGATTCAGCTT+CGG | 0.413715 | 6.1:-181921 | None:intergenic |
| GCTTGGGGAGCACTCATCCA+TGG | 0.422593 | 6.1:+182422 | MS.gene82777:CDS |
| ATAGTGTGGTACCCTGCATT+TGG | 0.425828 | 6.1:-184403 | None:intergenic |
| TTCGGAATTTGGAGGAAGTC+CGG | 0.429359 | 6.1:+182561 | MS.gene82777:CDS |
| AGCTGTTTCGCTTCTGAGAA+AGG | 0.431667 | 6.1:+182015 | MS.gene82777:CDS |
| GGAAGAGCCGAAATGGTCTA+AGG | 0.431832 | 6.1:+182270 | MS.gene82777:CDS |
| GTAAGCGGAGGCAGCGTAAC+CGG | 0.431967 | 6.1:-181564 | None:intergenic |
| CGTTGGCTGCCTCCGCGGCT+AGG | 0.435971 | 6.1:+182176 | MS.gene82777:CDS |
| TTCCTCACCGTCTCCGGTCC+CGG | 0.437032 | 6.1:+181614 | MS.gene82777:CDS |
| AATGGGGAAGGGATTGTTGC+CGG | 0.440749 | 6.1:+182144 | MS.gene82777:CDS |
| ACATCCTTTGTTCCAAATGC+AGG | 0.441014 | 6.1:+184391 | MS.gene82777:CDS |
| GCAGCCAACGGATGATCATC+CGG | 0.446211 | 6.1:-182163 | None:intergenic |
| ACCGTGAACGCAACCGGGAC+CGG | 0.448183 | 6.1:-181627 | None:intergenic |
| GGATGTGAAGTTTGTGTTGG+TGG | 0.452229 | 6.1:+182291 | MS.gene82777:CDS |
| GTTTCTCTTCCGCGCTTCTA+CGG | 0.457373 | 6.1:-184339 | None:intergenic |
| GCGTGTAGCGAGTGAAGTTA+CGG | 0.458850 | 6.1:-181492 | None:intergenic |
| CTTGGGGAGCACTCATCCAT+GGG | 0.462647 | 6.1:+182423 | MS.gene82777:CDS |
| CCCATTGGAGTCGGAAGAAA+CGG | 0.463860 | 6.1:-182127 | None:intergenic |
| GCCTTGTCGTTGCTGTTGAA+GGG | 0.464496 | 6.1:+182740 | MS.gene82777:CDS |
| TCCGTTTCTTCCGACTCCAA+TGG | 0.470743 | 6.1:+182126 | MS.gene82777:CDS |
| AGGTTGGATGCTGGTACTTG+GGG | 0.472904 | 6.1:+182661 | MS.gene82777:CDS |
| TGATTGGTGCGAGGTTGAAT+TGG | 0.474694 | 6.1:+182233 | MS.gene82777:CDS |
| GGAACAAAGGATGTCGGAGC+GGG | 0.475357 | 6.1:-184382 | None:intergenic |
| GCTAAATCCTTCTCTCAATT+CGG | 0.476034 | 6.1:+181437 | MS.gene82777:CDS |
| TGGCCTACTGTCATGATCTC+AGG | 0.478594 | 6.1:+181683 | MS.gene82777:CDS |
| ATGGTAACATTTATGACGGC+TGG | 0.480846 | 6.1:-184514 | None:intergenic |
| TTCGGCGTCCAACACATGTT+CGG | 0.481163 | 6.1:+181455 | MS.gene82777:CDS |
| CCGTTGATTGTGTTTGGGAA+AGG | 0.481200 | 6.1:+182046 | MS.gene82777:CDS |
| GGTTACGCTGCCTCCGCTTA+CGG | 0.482147 | 6.1:+181566 | MS.gene82777:CDS |
| CTCGAAATAGCTTCCACCCA+TGG | 0.482342 | 6.1:-182439 | None:intergenic |
| CGTGTAGCGAGTGAAGTTAC+GGG | 0.482755 | 6.1:-181491 | None:intergenic |
| TGTGAAGATGGAGGCTCAAT+TGG | 0.483919 | 6.1:+182480 | MS.gene82777:CDS |
| GGTATCTTCCTCACCGTCTC+CGG | 0.487962 | 6.1:+181608 | MS.gene82777:CDS |
| TTTCCTTTCAGACATTGGTT+CGG | 0.491005 | 6.1:+184260 | MS.gene82777:intron |
| GACAGTAGGCCATGTGTTAG+TGG | 0.494295 | 6.1:-181672 | None:intergenic |
| CCCTATGCCGGTTCTGAGAG+TGG | 0.502759 | 6.1:+184541 | MS.gene82777:CDS |
| AGTGGTGCCGTTGGAGAGAC+CGG | 0.508324 | 6.1:-181654 | None:intergenic |
| GAAGAAATTGGTGGAAAGGA+CGG | 0.510742 | 6.1:+182099 | MS.gene82777:CDS |
| GCTCCTGTGGTGGTTTCTGA+AGG | 0.514501 | 6.1:+182583 | MS.gene82777:CDS |
| CTTCCGACTCCAATGGGGAA+GGG | 0.516974 | 6.1:+182133 | MS.gene82777:CDS |
| TCAGAAACCACCACAGGAGC+CGG | 0.517066 | 6.1:-182580 | None:intergenic |
| GCATCTCTGATAATCCTCAT+TGG | 0.517324 | 6.1:-182535 | None:intergenic |
| ACAGCAACGACAAGGCGATC+AGG | 0.517340 | 6.1:-182733 | None:intergenic |
| TCTCAGAATCTTTCTCTGCT+AGG | 0.519344 | 6.1:+184488 | MS.gene82777:CDS |
| GAAGGACAATGGTGTGAAGA+TGG | 0.519995 | 6.1:+182468 | MS.gene82777:CDS |
| AACGCAACCGGGACCGGAGA+CGG | 0.521595 | 6.1:-181621 | None:intergenic |
| AATTCAATGGGAGAAATTGA+CGG | 0.523138 | 6.1:+181401 | None:intergenic |
| GGCAACAATCCCTTCCCCAT+TGG | 0.524820 | 6.1:-182142 | None:intergenic |
| AACCAAAACGATGTCGGTCG+CGG | 0.525927 | 6.1:+181713 | MS.gene82777:CDS |
| CCAGCATCCAACCTAGTCCT+TGG | 0.526297 | 6.1:-182652 | None:intergenic |
| CCTTGTCGTTGCTGTTGAAG+GGG | 0.527216 | 6.1:+182741 | MS.gene82777:CDS |
| CATCCTCCCACTCTCAGAAC+CGG | 0.529633 | 6.1:-184548 | None:intergenic |
| GTTACCATTGATCCCTATGC+CGG | 0.530592 | 6.1:+184529 | MS.gene82777:CDS |
| CAACACATGTTCGGCGTCGT+CGG | 0.531298 | 6.1:+181464 | MS.gene82777:CDS |
| TGGATATGGATTTAGTGCTA+TGG | 0.537673 | 6.1:+182768 | MS.gene82777:CDS |
| TGGTCTTGGTTATTGTATTG+CGG | 0.538505 | 6.1:+182696 | MS.gene82777:CDS |
| TGTGACGTGGCGATTGTGAT+TGG | 0.538530 | 6.1:+182217 | MS.gene82777:CDS |
| TGTGTTGGTGGATGTGAGCA+AGG | 0.538770 | 6.1:+182303 | MS.gene82777:CDS |
| TCGATCTGTGTTGGTTCAGA+AGG | 0.541457 | 6.1:+182627 | MS.gene82777:CDS |
| CCCACTCTCAGAACCGGCAT+AGG | 0.547084 | 6.1:-184542 | None:intergenic |
| GGCTACCTCACCTCCCGTCC+CGG | 0.551294 | 6.1:+181587 | MS.gene82777:CDS |
| TGGAGGAAGTCCGGCTCCTG+TGG | 0.552079 | 6.1:+182570 | MS.gene82777:CDS |
| GAAACGGATGCCGAGAGAGA+CGG | 0.553705 | 6.1:-181516 | None:intergenic |
| CCACTCTCAGAACCGGCATA+GGG | 0.554364 | 6.1:-184541 | None:intergenic |
| TAAGGATGTGAAGTTTGTGT+TGG | 0.554761 | 6.1:+182288 | MS.gene82777:CDS |
| TGCAGGGTACCACACTATGA+TGG | 0.554969 | 6.1:+184408 | MS.gene82777:CDS |
| AATTGAAGAAATTGGTGGAA+AGG | 0.557407 | 6.1:+182095 | MS.gene82777:CDS |
| GAAGGAGCCAAGGACTAGGT+TGG | 0.558905 | 6.1:+182645 | MS.gene82777:CDS |
| GGTTGCGTTCACGGTCTCGC+CGG | 0.559164 | 6.1:+181635 | MS.gene82777:CDS |
| TTCAGAAGGAGCCAAGGACT+AGG | 0.561809 | 6.1:+182641 | MS.gene82777:CDS |
| AGAACCGGCATAGGGATCAA+TGG | 0.563367 | 6.1:-184533 | None:intergenic |
| AGAAATTGGTGGAAAGGACG+GGG | 0.563983 | 6.1:+182101 | MS.gene82777:CDS |
| AGGAAGTCCGGCTCCTGTGG+TGG | 0.566455 | 6.1:+182573 | MS.gene82777:CDS |
| GGATGTTGGTCGATCTGTGT+TGG | 0.566745 | 6.1:+182618 | MS.gene82777:CDS |
| GCGAGACCGTGAACGCAACC+GGG | 0.568089 | 6.1:-181632 | None:intergenic |
| AGATACCGGGACGGGAGGTG+AGG | 0.568393 | 6.1:-181592 | None:intergenic |
| ATTTAGTGCTATGGAAGTTG+AGG | 0.568805 | 6.1:+182777 | MS.gene82777:CDS |
| CCTATGCCGGTTCTGAGAGT+GGG | 0.571561 | 6.1:+184542 | MS.gene82777:CDS |
| GCTACACGCGCCGTCTCTCT+CGG | 0.574538 | 6.1:+181506 | MS.gene82777:CDS |
| AGATGAATTGAAGAAATTGG+TGG | 0.576890 | 6.1:+182090 | MS.gene82777:CDS |
| GGTTGGATGCTGGTACTTGG+GGG | 0.577192 | 6.1:+182662 | MS.gene82777:CDS |
| TCTTCCGACTCCAATGGGGA+AGG | 0.577825 | 6.1:+182132 | MS.gene82777:CDS |
| CCAAGGACTAGGTTGGATGC+TGG | 0.578727 | 6.1:+182652 | MS.gene82777:CDS |
| TGAGTGCTCCCCAAGCAAAA+CGG | 0.579880 | 6.1:-182415 | None:intergenic |
| GGAGACGGTGAGGAAGATAC+CGG | 0.580493 | 6.1:-181606 | None:intergenic |
| GATGCTATTTCGGAATTTGG+AGG | 0.580533 | 6.1:+182553 | MS.gene82777:CDS |
| AATTCCGAATTGCGTCGCAC+AGG | 0.580568 | 6.1:+181814 | MS.gene82777:CDS |
| GGTGAGGAAGATACCGGGAC+GGG | 0.581947 | 6.1:-181600 | None:intergenic |
| ATCAATGGTAACATTTATGA+CGG | 0.582311 | 6.1:-184518 | None:intergenic |
| GGTGAGGTAGCCGTAAGCGG+AGG | 0.583833 | 6.1:-181576 | None:intergenic |
| AGCTATTTCGAGCAAAGTGA+AGG | 0.585244 | 6.1:+182450 | MS.gene82777:CDS |
| CGACGACGCCGAACATGTGT+TGG | 0.585822 | 6.1:-181463 | None:intergenic |
| CACAGATCGACCAACATCCA+TGG | 0.588090 | 6.1:-182614 | None:intergenic |
| TTGAAAACAATCACCACCAC+AGG | 0.588388 | 6.1:-184292 | None:intergenic |
| CATCCTTTGTTCCAAATGCA+GGG | 0.589443 | 6.1:+184392 | MS.gene82777:CDS |
| AATTCCGTTGCGAATCGACC+TGG | 0.589507 | 6.1:+181845 | MS.gene82777:CDS |
| AACCGGCGGATTGTTCGTTG+TGG | 0.592058 | 6.1:-181547 | None:intergenic |
| GAGGAAGATACCGGGACGGG+AGG | 0.593018 | 6.1:-181597 | None:intergenic |
| CTAGCCGCGGAGGCAGCCAA+CGG | 0.593647 | 6.1:-182175 | None:intergenic |
| CCTTTCCCAAACACAATCAA+CGG | 0.595147 | 6.1:-182046 | None:intergenic |
| TTCTGAAGGTGCTAATACCA+TGG | 0.595296 | 6.1:+182597 | MS.gene82777:CDS |
| AATCCCTTCCCCATTGGAGT+CGG | 0.598920 | 6.1:-182136 | None:intergenic |
| CCATGTGTTAGTGGTGCCGT+TGG | 0.601490 | 6.1:-181663 | None:intergenic |
| CCCCTTCAACAGCAACGACA+AGG | 0.603202 | 6.1:-182741 | None:intergenic |
| CGTTGTGGAAAGCGATGAAA+CGG | 0.603488 | 6.1:-181532 | None:intergenic |
| GGAGCGGGGTCCTCCTTGTG+AGG | 0.604623 | 6.1:-184367 | None:intergenic |
| GGAGGTGAGGTAGCCGTAAG+CGG | 0.606197 | 6.1:-181579 | None:intergenic |
| TTGGACGCCGAATTGAGAGA+AGG | 0.613367 | 6.1:-181444 | None:intergenic |
| TTCCACAACGAACAATCCGC+CGG | 0.614198 | 6.1:+181545 | MS.gene82777:CDS |
| AGAGAAACATGGACCTCACA+AGG | 0.617835 | 6.1:+184354 | MS.gene82777:CDS |
| GATGGAGGCTCAATTGGCAA+AGG | 0.622460 | 6.1:+182486 | MS.gene82777:CDS |
| CAATCACCACCACAGGCAGT+TGG | 0.622614 | 6.1:-184285 | None:intergenic |
| AACCGGGACCGGAGACGGTG+AGG | 0.622684 | 6.1:-181616 | None:intergenic |
| TCTTGTAACCAAAACGATGT+CGG | 0.622756 | 6.1:+181707 | MS.gene82777:CDS |
| TGGAACAAAGGATGTCGGAG+CGG | 0.622773 | 6.1:-184383 | None:intergenic |
| TGTTGGTTCAGAAGGAGCCA+AGG | 0.626040 | 6.1:+182635 | MS.gene82777:CDS |
| AGCAAGTGACCTAGCCGCGG+AGG | 0.628473 | 6.1:-182185 | None:intergenic |
| GTTGCCGGATGATCATCCGT+TGG | 0.630066 | 6.1:+182159 | MS.gene82777:CDS |
| GCATTTGGAACAAAGGATGT+CGG | 0.630283 | 6.1:-184388 | None:intergenic |
| ATGCCGGTTCTGAGAGTGGG+AGG | 0.630890 | 6.1:+184545 | MS.gene82777:CDS |
| GGTCTCGCCGGTCTCTCCAA+CGG | 0.631545 | 6.1:+181647 | MS.gene82777:CDS |
| CGCTTCTGAGAAAGGCGGAG+AGG | 0.633700 | 6.1:+182023 | MS.gene82777:CDS |
| ACCACCAGGTCGATTCGCAA+CGG | 0.637403 | 6.1:-181849 | None:intergenic |
| TCCGTTGCGAATCGACCTGG+TGG | 0.638885 | 6.1:+181848 | MS.gene82777:CDS |
| AGCGGAGGCAGCGTAACCGG+CGG | 0.642708 | 6.1:-181561 | None:intergenic |
| GAGACGGTGAGGAAGATACC+GGG | 0.648886 | 6.1:-181605 | None:intergenic |
| AGATCCAAATAAACACCACC+AGG | 0.649375 | 6.1:-181863 | None:intergenic |
| CGGTGAGGAAGATACCGGGA+CGG | 0.650594 | 6.1:-181601 | None:intergenic |
| TCGAGCAAAGTGAAGGACAA+TGG | 0.651334 | 6.1:+182457 | MS.gene82777:CDS |
| GAACCTGAGATCATGACAGT+AGG | 0.653809 | 6.1:-181686 | None:intergenic |
| GATTCGCAACGGAATTAGCA+AGG | 0.654780 | 6.1:-181838 | None:intergenic |
| CCAACGGCACCACTAACACA+TGG | 0.655427 | 6.1:+181663 | MS.gene82777:CDS |
| AGAAGCGCGGAAGAGAAACA+TGG | 0.658183 | 6.1:+184343 | MS.gene82777:CDS |
| GGTGCTAATACCATGGATGT+TGG | 0.661368 | 6.1:+182604 | MS.gene82777:CDS |
| GCGATCAGGATAAGCGACAG+CGG | 0.666530 | 6.1:-182719 | None:intergenic |
| GAACAAAGGATGTCGGAGCG+GGG | 0.667800 | 6.1:-184381 | None:intergenic |
| GCACCTTCAGAAACCACCAC+AGG | 0.667938 | 6.1:-182586 | None:intergenic |
| TCGGTACCAACTGCCTGTGG+TGG | 0.670360 | 6.1:+184279 | MS.gene82777:CDS |
| CAAAAGCTTCCATCATAGTG+TGG | 0.672720 | 6.1:-184417 | None:intergenic |
| TCATCCGTTGGCTGCCTCCG+CGG | 0.676715 | 6.1:+182171 | MS.gene82777:CDS |
| TGGTGGTGACCGTAGAAGCG+CGG | 0.676748 | 6.1:+184330 | MS.gene82777:CDS |
| GGGGAGCACTCATCCATGGG+TGG | 0.677623 | 6.1:+182426 | MS.gene82777:CDS |
| TGTTTCGCTTCTGAGAAAGG+CGG | 0.679005 | 6.1:+182018 | MS.gene82777:CDS |
| GTACCCTGCATTTGGAACAA+AGG | 0.679208 | 6.1:-184395 | None:intergenic |
| TGGCGATTGTGATTGGTGCG+AGG | 0.681842 | 6.1:+182224 | MS.gene82777:CDS |
| GGTTCGGTACCAACTGCCTG+TGG | 0.691668 | 6.1:+184276 | MS.gene82777:CDS |
| AATAGCAAGTGACCTAGCCG+CGG | 0.695771 | 6.1:-182188 | None:intergenic |
| CGTTTCTTCCGACTCCAATG+GGG | 0.702926 | 6.1:+182128 | MS.gene82777:CDS |
| GGACAATGGTGTGAAGATGG+AGG | 0.707741 | 6.1:+182471 | MS.gene82777:CDS |
| AACAATGGTGGTGTATATGG+TGG | 0.712302 | 6.1:+184313 | MS.gene82777:CDS |
| GTGTAGCGAGTGAAGTTACG+GGG | 0.725280 | 6.1:-181490 | None:intergenic |
| GAAACATGGACCTCACAAGG+AGG | 0.726765 | 6.1:+184357 | MS.gene82777:CDS |
| TGCTATTGGAAAATGTGACG+TGG | 0.744033 | 6.1:+182204 | MS.gene82777:CDS |
| GAGAGAAGGATTTAGCAGCG+AGG | 0.776384 | 6.1:-181430 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATTTGAAAAATCT+GGG | - | chr6.1:183616-183635 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAGGTTTTT+TGG | + | chr6.1:183073-183092 | MS.gene82777:intron | 10.0% |
| !!! | TTTTTTTTTTTTCAATTTCA+AGG | - | chr6.1:183063-183082 | None:intergenic | 10.0% |
| !! | GATATAAAATTTGAAAAATC+TGG | - | chr6.1:183617-183636 | None:intergenic | 15.0% |
| !! | TATAAAATTTGAAAAATCTG+GGG | - | chr6.1:183615-183634 | None:intergenic | 15.0% |
| !! | AATGTGATCTTATTCATATA+TGG | + | chr6.1:184166-184185 | MS.gene82777:intron | 20.0% |
| !! | ACCAAAAATTTATGAATGAA+TGG | - | chr6.1:184132-184151 | None:intergenic | 20.0% |
| !! | ATAAAATTTGAAAAATCTGG+GGG | - | chr6.1:183614-183633 | None:intergenic | 20.0% |
| !! | ATTCTTGTATTCATAAAATG+AGG | - | chr6.1:184214-184233 | None:intergenic | 20.0% |
| !! | CCTTGAAATTGAAAAAAAAA+GGG | + | chr6.1:182969-182988 | MS.gene82777:intron | 20.0% |
| !! | CTTGAAATTGAAAAAAAAAG+GGG | + | chr6.1:182970-182989 | MS.gene82777:intron | 20.0% |
| !! | TCCTTGAAATTGAAAAAAAA+AGG | + | chr6.1:182968-182987 | MS.gene82777:intron | 20.0% |
| !! | TTGAAATTGAAAAAAAAAGG+GGG | + | chr6.1:182971-182990 | MS.gene82777:intron | 20.0% |
| !!! | ACATCAGTAATTGATTTAAA+TGG | - | chr6.1:183691-183710 | None:intergenic | 20.0% |
| !!! | ACCATTCATTCATAAATTTT+TGG | + | chr6.1:184128-184147 | MS.gene82777:intron | 20.0% |
| !!! | CTTAACAAGTTTGTTATTTT+GGG | + | chr6.1:183203-183222 | MS.gene82777:intron | 20.0% |
| !!! | CTTGTTAAGAAATTTTGATA+AGG | - | chr6.1:183192-183211 | None:intergenic | 20.0% |
| !!! | TCTTAACAAGTTTGTTATTT+TGG | + | chr6.1:183202-183221 | MS.gene82777:intron | 20.0% |
| ! | AAATTGAACAAAATGCTGTT+TGG | + | chr6.1:183804-183823 | MS.gene82777:intron | 25.0% |
| ! | AAGTAAAGACCTTAATAACA+AGG | - | chr6.1:183974-183993 | None:intergenic | 25.0% |
| ! | ACATACACATATTAGATTTG+TGG | + | chr6.1:183160-183179 | MS.gene82777:intron | 25.0% |
| ! | ATATAACTTCTATAGTCTCA+GGG | - | chr6.1:183241-183260 | None:intergenic | 25.0% |
| ! | ATCAATGGTAACATTTATGA+CGG | - | chr6.1:184521-184540 | None:intergenic | 25.0% |
| ! | ATGTTCTTATGCTTGTAAAA+TGG | + | chr6.1:184062-184081 | MS.gene82777:intron | 25.0% |
| ! | ATTGGCGTCAAAAAATTAAA+CGG | - | chr6.1:182520-182539 | None:intergenic | 25.0% |
| ! | GAAATTGAAAAAAGGTTGTT+TGG | + | chr6.1:183443-183462 | MS.gene82777:intron | 25.0% |
| ! | TATATAACTTCTATAGTCTC+AGG | - | chr6.1:183242-183261 | None:intergenic | 25.0% |
| ! | TATCAAAGATCTTTACTATC+AGG | - | chr6.1:183379-183398 | None:intergenic | 25.0% |
| ! | TGAAATTGAAAAAAAAAGGG+GGG | + | chr6.1:182972-182991 | MS.gene82777:intron | 25.0% |
| ! | TGAAGATGAATTGAAGAAAT+TGG | + | chr6.1:182087-182106 | MS.gene82777:CDS | 25.0% |
| ! | TTGTCCTTGAAATTGAAAAA+AGG | + | chr6.1:182965-182984 | MS.gene82777:intron | 25.0% |
| !!! | ACAACCTTTTTTCAATTTCA+AGG | - | chr6.1:183442-183461 | None:intergenic | 25.0% |
| !!! | AGTTTTGGAGATTTTGAATA+AGG | + | chr6.1:182378-182397 | MS.gene82777:CDS | 25.0% |
| !!! | CCCTTTTTTTTTCAATTTCA+AGG | - | chr6.1:182972-182991 | None:intergenic | 25.0% |
| !!! | TTTTTTTCAATTTCAAGGAC+AGG | - | chr6.1:182967-182986 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCTTTCAGACAT+TGG | + | chr6.1:184255-184274 | MS.gene82777:intron | 25.0% |
| AATTGAAGAAATTGGTGGAA+AGG | + | chr6.1:182095-182114 | MS.gene82777:CDS | 30.0% | |
| AGATGAATTGAAGAAATTGG+TGG | + | chr6.1:182090-182109 | MS.gene82777:CDS | 30.0% | |
| ATAAAACTTGCATAGTCTCA+GGG | - | chr6.1:183999-184018 | None:intergenic | 30.0% | |
| ATCAATTACTGATGTTGTGA+AGG | + | chr6.1:183696-183715 | MS.gene82777:intron | 30.0% | |
| CCTGTTAAGAAGTTATCATA+AGG | - | chr6.1:183931-183950 | None:intergenic | 30.0% | |
| CCTTATGATAACTTCTTAAC+AGG | + | chr6.1:183928-183947 | MS.gene82777:intron | 30.0% | |
| GATGATATAGACATAAGTAG+CGG | + | chr6.1:182925-182944 | MS.gene82777:intron | 30.0% | |
| GCTACATCAGAGATTTAAAA+TGG | - | chr6.1:183324-183343 | None:intergenic | 30.0% | |
| TATAAAACTTGCATAGTCTC+AGG | - | chr6.1:184000-184019 | None:intergenic | 30.0% | |
| TCATTTGCAACAAAGAAGTT+GGG | - | chr6.1:183128-183147 | None:intergenic | 30.0% | |
| TGTAACATCCAAATCCAATA+GGG | - | chr6.1:182881-182900 | None:intergenic | 30.0% | |
| TTGTAACATCCAAATCCAAT+AGG | - | chr6.1:182882-182901 | None:intergenic | 30.0% | |
| ! | AGATACATATCTGAGATATG+TGG | + | chr6.1:183899-183918 | MS.gene82777:intron | 30.0% |
| ! | AGATCTTTGATAGTTAGTAG+CGG | + | chr6.1:183387-183406 | MS.gene82777:intron | 30.0% |
| ! | CAGCATTTTGTTCAATTTCA+TGG | - | chr6.1:183802-183821 | None:intergenic | 30.0% |
| ! | GATTATCAGAGATGCTATTT+CGG | + | chr6.1:182543-182562 | MS.gene82777:CDS | 30.0% |
| ! | GATTTTCTCTGCTAGATTTT+TGG | - | chr6.1:181951-181970 | None:intergenic | 30.0% |
| ! | TTGATTGCGAATTTTGTGAA+AGG | - | chr6.1:181776-181795 | None:intergenic | 30.0% |
| ! | TTTTGATGCAATACATCAGT+AGG | - | chr6.1:181890-181909 | None:intergenic | 30.0% |
| !! | AGCTTAGAAAACCGTTTTTA+GGG | + | chr6.1:182335-182354 | MS.gene82777:CDS | 30.0% |
| !! | TCAGTTTAGCCTTGTTATTA+AGG | + | chr6.1:183962-183981 | MS.gene82777:intron | 30.0% |
| !!! | TTAATTTTTTGACGCCAATG+AGG | + | chr6.1:182521-182540 | MS.gene82777:CDS | 30.0% |
| AAAGCAGTATTCTCAGTTTC+AGG | - | chr6.1:184034-184053 | None:intergenic | 35.0% | |
| AATGTGTTTCTCTAGTCTAG+TGG | + | chr6.1:182900-182919 | MS.gene82777:intron | 35.0% | |
| ACTTCTTTGTTGCAAATGAG+TGG | + | chr6.1:183129-183148 | MS.gene82777:intron | 35.0% | |
| ATTCCTGATAGCAAAGATCT+TGG | + | chr6.1:183743-183762 | MS.gene82777:intron | 35.0% | |
| ATTTAGTGCTATGGAAGTTG+AGG | + | chr6.1:182777-182796 | MS.gene82777:CDS | 35.0% | |
| CTCATTTGCAACAAAGAAGT+TGG | - | chr6.1:183129-183148 | None:intergenic | 35.0% | |
| CTTCTTTGTTGCAAATGAGT+GGG | + | chr6.1:183130-183149 | MS.gene82777:intron | 35.0% | |
| GCTAAATCCTTCTCTCAATT+CGG | + | chr6.1:181437-181456 | MS.gene82777:CDS | 35.0% | |
| GGCAAAGACCTAAAATAACA+AGG | - | chr6.1:183586-183605 | None:intergenic | 35.0% | |
| TAAGGATGTGAAGTTTGTGT+TGG | + | chr6.1:182288-182307 | MS.gene82777:CDS | 35.0% | |
| TCACCAACTAACCCTAAAAA+CGG | - | chr6.1:182349-182368 | None:intergenic | 35.0% | |
| TCTGAACGAGTTATTTACTC+TGG | + | chr6.1:183558-183577 | MS.gene82777:intron | 35.0% | |
| TCTTGTAACCAAAACGATGT+CGG | + | chr6.1:181707-181726 | MS.gene82777:CDS | 35.0% | |
| TGAAAAAAAAAGGGGGGATT+TGG | + | chr6.1:182978-182997 | MS.gene82777:intron | 35.0% | |
| TGGATATGGATTTAGTGCTA+TGG | + | chr6.1:182768-182787 | MS.gene82777:CDS | 35.0% | |
| TTAAATCTCTGATGTAGCGA+GGG | + | chr6.1:183326-183345 | MS.gene82777:intron | 35.0% | |
| TTCACATCCTTAGACCATTT+CGG | - | chr6.1:182280-182299 | None:intergenic | 35.0% | |
| TTGAAAAATCTGGGGGAAAA+AGG | - | chr6.1:183607-183626 | None:intergenic | 35.0% | |
| TTTAAATCTCTGATGTAGCG+AGG | + | chr6.1:183325-183344 | MS.gene82777:intron | 35.0% | |
| ! | AAAGATGATCCGTTTTGCTT+GGG | + | chr6.1:182406-182425 | MS.gene82777:CDS | 35.0% |
| ! | CTAGTTTGCAACATAGAAGT+TGG | - | chr6.1:183865-183884 | None:intergenic | 35.0% |
| ! | CTCGTTCAGAAGTTTTCATA+AGG | - | chr6.1:183548-183567 | None:intergenic | 35.0% |
| ! | GTGATTGTTTTCAACAATGG+TGG | + | chr6.1:184301-184320 | MS.gene82777:CDS | 35.0% |
| ! | GTGGTGATTGTTTTCAACAA+TGG | + | chr6.1:184298-184317 | MS.gene82777:CDS | 35.0% |
| ! | TAAAGATGATCCGTTTTGCT+TGG | + | chr6.1:182405-182424 | MS.gene82777:CDS | 35.0% |
| ! | TATCCAAGATCTTTGCTATC+AGG | - | chr6.1:183749-183768 | None:intergenic | 35.0% |
| ! | TGAATTGGCTGCTTCATTTT+GGG | + | chr6.1:182248-182267 | MS.gene82777:CDS | 35.0% |
| ! | TGGTCTTGGTTATTGTATTG+CGG | + | chr6.1:182696-182715 | MS.gene82777:CDS | 35.0% |
| ! | TTCAACAATGGTGGTGTATA+TGG | + | chr6.1:184310-184329 | MS.gene82777:CDS | 35.0% |
| ! | TTGAATTGGCTGCTTCATTT+TGG | + | chr6.1:182247-182266 | MS.gene82777:CDS | 35.0% |
| ! | TTTCCTTTCAGACATTGGTT+CGG | + | chr6.1:184260-184279 | MS.gene82777:intron | 35.0% |
| ! | TTTCTGCTTAGAACTTTTGC+TGG | + | chr6.1:183349-183368 | MS.gene82777:intron | 35.0% |
| !! | AGAGATGCTATTTCGGAATT+TGG | + | chr6.1:182550-182569 | MS.gene82777:CDS | 35.0% |
| !! | GAGCTTAGAAAACCGTTTTT+AGG | + | chr6.1:182334-182353 | MS.gene82777:CDS | 35.0% |
| !! | TGGTGATGCTAAAGAAGTTT+TGG | + | chr6.1:182363-182382 | MS.gene82777:CDS | 35.0% |
| !!! | AAACCGTTTTTAGGGTTAGT+TGG | + | chr6.1:182343-182362 | MS.gene82777:CDS | 35.0% |
| AAGAAATTGGTGGAAAGGAC+GGG | + | chr6.1:182100-182119 | MS.gene82777:CDS | 40.0% | |
| ACATCCTTTGTTCCAAATGC+AGG | + | chr6.1:184391-184410 | MS.gene82777:CDS | 40.0% | |
| AGATACACATGAGATATGCG+TGG | + | chr6.1:183510-183529 | MS.gene82777:intron | 40.0% | |
| AGATCCAAATAAACACCACC+AGG | - | chr6.1:181866-181885 | None:intergenic | 40.0% | |
| ATGGTAACATTTATGACGGC+TGG | - | chr6.1:184517-184536 | None:intergenic | 40.0% | |
| CAAAAGCTTCCATCATAGTG+TGG | - | chr6.1:184420-184439 | None:intergenic | 40.0% | |
| CATCCTTTGTTCCAAATGCA+GGG | + | chr6.1:184392-184411 | MS.gene82777:CDS | 40.0% | |
| CATGGCTTATTCTCTGTTTC+AGG | - | chr6.1:183276-183295 | None:intergenic | 40.0% | |
| CCTTTCCCAAACACAATCAA+CGG | - | chr6.1:182049-182068 | None:intergenic | 40.0% | |
| CTGAAACAGAGAATAAGCCA+TGG | + | chr6.1:183274-183293 | MS.gene82777:intron | 40.0% | |
| CTTCTATAGTCTCAGGGAAA+AGG | - | chr6.1:183235-183254 | None:intergenic | 40.0% | |
| GAAGAAATTGGTGGAAAGGA+CGG | + | chr6.1:182099-182118 | MS.gene82777:CDS | 40.0% | |
| GCAGTGATGAATCTTAGTAG+TGG | + | chr6.1:183016-183035 | MS.gene82777:intron | 40.0% | |
| GCATCTCTGATAATCCTCAT+TGG | - | chr6.1:182538-182557 | None:intergenic | 40.0% | |
| GGTTAAAAGCGATTCAGCTT+CGG | - | chr6.1:181924-181943 | None:intergenic | 40.0% | |
| GTTGTGATCCCTATTGGATT+TGG | + | chr6.1:182870-182889 | MS.gene82777:intron | 40.0% | |
| TCTCAGAATCTTTCTCTGCT+AGG | + | chr6.1:184488-184507 | MS.gene82777:CDS | 40.0% | |
| TGCTATTGGAAAATGTGACG+TGG | + | chr6.1:182204-182223 | MS.gene82777:CDS | 40.0% | |
| TTGAAAACAATCACCACCAC+AGG | - | chr6.1:184295-184314 | None:intergenic | 40.0% | |
| ! | AACAATGGTGGTGTATATGG+TGG | + | chr6.1:184313-184332 | MS.gene82777:CDS | 40.0% |
| ! | AAGATGATCCGTTTTGCTTG+GGG | + | chr6.1:182407-182426 | MS.gene82777:CDS | 40.0% |
| ! | AGAGCTGACTTTAGTTCAAC+AGG | - | chr6.1:184469-184488 | None:intergenic | 40.0% |
| ! | AGCTATTTCGAGCAAAGTGA+AGG | + | chr6.1:182450-182469 | MS.gene82777:CDS | 40.0% |
| ! | GAATTGGCTGCTTCATTTTG+GGG | + | chr6.1:182249-182268 | MS.gene82777:CDS | 40.0% |
| ! | GCATTTGGAACAAAGGATGT+CGG | - | chr6.1:184391-184410 | None:intergenic | 40.0% |
| !! | ACTATGATGGAAGCTTTTGG+TGG | + | chr6.1:184421-184440 | MS.gene82777:CDS | 40.0% |
| !! | CACACTATGATGGAAGCTTT+TGG | + | chr6.1:184418-184437 | MS.gene82777:CDS | 40.0% |
| !! | CTATGATGGAAGCTTTTGGT+GGG | + | chr6.1:184422-184441 | MS.gene82777:CDS | 40.0% |
| !! | GATGCTATTTCGGAATTTGG+AGG | + | chr6.1:182553-182572 | MS.gene82777:CDS | 40.0% |
| !! | TTCTGAAGGTGCTAATACCA+TGG | + | chr6.1:182597-182616 | MS.gene82777:CDS | 40.0% |
| !!! | CTCTGCTAGATTTTTGGCTT+CGG | - | chr6.1:181945-181964 | None:intergenic | 40.0% |
| !!! | CTCTGGAGCCTTGTTATTTT+AGG | + | chr6.1:183575-183594 | MS.gene82777:intron | 40.0% |
| !!! | TTTTTTGCAGCAGCATACCA+TGG | - | chr6.1:183294-183313 | None:intergenic | 40.0% |
| AGAAATTGGTGGAAAGGACG+GGG | + | chr6.1:182101-182120 | MS.gene82777:CDS | 45.0% | |
| AGAGAAACATGGACCTCACA+AGG | + | chr6.1:184354-184373 | MS.gene82777:CDS | 45.0% | |
| ATAGTGTGGTACCCTGCATT+TGG | - | chr6.1:184406-184425 | None:intergenic | 45.0% | |
| CGTTGTGGAAAGCGATGAAA+CGG | - | chr6.1:181535-181554 | None:intergenic | 45.0% | |
| GAACCTGAGATCATGACAGT+AGG | - | chr6.1:181689-181708 | None:intergenic | 45.0% | |
| GAAGGACAATGGTGTGAAGA+TGG | + | chr6.1:182468-182487 | MS.gene82777:CDS | 45.0% | |
| GATTCGCAACGGAATTAGCA+AGG | - | chr6.1:181841-181860 | None:intergenic | 45.0% | |
| GGATGTGAAGTTTGTGTTGG+TGG | + | chr6.1:182291-182310 | MS.gene82777:CDS | 45.0% | |
| GGTGCTAATACCATGGATGT+TGG | + | chr6.1:182604-182623 | MS.gene82777:CDS | 45.0% | |
| GTACCGAACCAATGTCTGAA+AGG | - | chr6.1:184266-184285 | None:intergenic | 45.0% | |
| GTGGGAAGGGTTATCTTGTT+GGG | + | chr6.1:184440-184459 | MS.gene82777:CDS | 45.0% | |
| GTTACCATTGATCCCTATGC+CGG | + | chr6.1:184529-184548 | MS.gene82777:CDS | 45.0% | |
| GTTGAAGGGGATTCTGGATA+TGG | + | chr6.1:182754-182773 | MS.gene82777:CDS | 45.0% | |
| TCGAGCAAAGTGAAGGACAA+TGG | + | chr6.1:182457-182476 | MS.gene82777:CDS | 45.0% | |
| TGATTGGTGCGAGGTTGAAT+TGG | + | chr6.1:182233-182252 | MS.gene82777:CDS | 45.0% | |
| TGCGACGCAATTCGGAATTT+CGG | - | chr6.1:181813-181832 | None:intergenic | 45.0% | |
| TGTGAAGATGGAGGCTCAAT+TGG | + | chr6.1:182480-182499 | MS.gene82777:CDS | 45.0% | |
| TTCGGAATTTGGAGGAAGTC+CGG | + | chr6.1:182561-182580 | MS.gene82777:CDS | 45.0% | |
| TTGTGCGTTGTGATCCCTAT+TGG | + | chr6.1:182864-182883 | MS.gene82777:intron | 45.0% | |
| ! | AGAGGCCGTTGATTGTGTTT+GGG | + | chr6.1:182041-182060 | MS.gene82777:CDS | 45.0% |
| ! | AGCTGTTTCGCTTCTGAGAA+AGG | + | chr6.1:182015-182034 | MS.gene82777:CDS | 45.0% |
| ! | ATGGAAGCTTTTGGTGGGAA+GGG | + | chr6.1:184427-184446 | MS.gene82777:CDS | 45.0% |
| ! | CCGTTGATTGTGTTTGGGAA+AGG | + | chr6.1:182046-182065 | MS.gene82777:CDS | 45.0% |
| ! | GTACCCTGCATTTGGAACAA+AGG | - | chr6.1:184398-184417 | None:intergenic | 45.0% |
| ! | TAGGTTGGATGCTGGTACTT+GGG | + | chr6.1:182660-182679 | MS.gene82777:CDS | 45.0% |
| ! | TCGACCTGGTGGTGTTTATT+TGG | + | chr6.1:181859-181878 | MS.gene82777:CDS | 45.0% |
| ! | TGTTTCGCTTCTGAGAAAGG+CGG | + | chr6.1:182018-182037 | MS.gene82777:CDS | 45.0% |
| !! | ATTTTGGGGAAGAGCCGAAA+TGG | + | chr6.1:182263-182282 | MS.gene82777:CDS | 45.0% |
| !! | TCGATCTGTGTTGGTTCAGA+AGG | + | chr6.1:182627-182646 | MS.gene82777:CDS | 45.0% |
| !! | AAATTGAAAAAAAAAAAAAA+AGG | + | chr6.1:183065-183084 | MS.gene82777:intron | 5.0% |
| AACCAAAACGATGTCGGTCG+CGG | + | chr6.1:181713-181732 | MS.gene82777:CDS | 50.0% | |
| AATAGCAAGTGACCTAGCCG+CGG | - | chr6.1:182191-182210 | None:intergenic | 50.0% | |
| AATCCCTTCCCCATTGGAGT+CGG | - | chr6.1:182139-182158 | None:intergenic | 50.0% | |
| AATGGGGAAGGGATTGTTGC+CGG | + | chr6.1:182144-182163 | MS.gene82777:CDS | 50.0% | |
| AATTCCGAATTGCGTCGCAC+AGG | + | chr6.1:181814-181833 | MS.gene82777:CDS | 50.0% | |
| AATTCCGTTGCGAATCGACC+TGG | + | chr6.1:181845-181864 | MS.gene82777:CDS | 50.0% | |
| AGAACCGGCATAGGGATCAA+TGG | - | chr6.1:184536-184555 | None:intergenic | 50.0% | |
| AGGTTGGATGCTGGTACTTG+GGG | + | chr6.1:182661-182680 | MS.gene82777:CDS | 50.0% | |
| CACAGATCGACCAACATCCA+TGG | - | chr6.1:182617-182636 | None:intergenic | 50.0% | |
| CCCATTGGAGTCGGAAGAAA+CGG | - | chr6.1:182130-182149 | None:intergenic | 50.0% | |
| CCGTTTCTTCCGACTCCAAT+GGG | + | chr6.1:182127-182146 | MS.gene82777:CDS | 50.0% | |
| CGTGTAGCGAGTGAAGTTAC+GGG | - | chr6.1:181494-181513 | None:intergenic | 50.0% | |
| CGTTTCTTCCGACTCCAATG+GGG | + | chr6.1:182128-182147 | MS.gene82777:CDS | 50.0% | |
| CTCGAAATAGCTTCCACCCA+TGG | - | chr6.1:182442-182461 | None:intergenic | 50.0% | |
| GAAACATGGACCTCACAAGG+AGG | + | chr6.1:184357-184376 | MS.gene82777:CDS | 50.0% | |
| GACAGTAGGCCATGTGTTAG+TGG | - | chr6.1:181675-181694 | None:intergenic | 50.0% | |
| GAGAGAAGGATTTAGCAGCG+AGG | - | chr6.1:181433-181452 | None:intergenic | 50.0% | |
| GATGGAGGCTCAATTGGCAA+AGG | + | chr6.1:182486-182505 | MS.gene82777:CDS | 50.0% | |
| GCGTGTAGCGAGTGAAGTTA+CGG | - | chr6.1:181495-181514 | None:intergenic | 50.0% | |
| GGAAGAGCCGAAATGGTCTA+AGG | + | chr6.1:182270-182289 | MS.gene82777:CDS | 50.0% | |
| GGACAATGGTGTGAAGATGG+AGG | + | chr6.1:182471-182490 | MS.gene82777:CDS | 50.0% | |
| GGATGTTGGTCGATCTGTGT+TGG | + | chr6.1:182618-182637 | MS.gene82777:CDS | 50.0% | |
| GGTGGGAAGGGTTATCTTGT+TGG | + | chr6.1:184439-184458 | MS.gene82777:CDS | 50.0% | |
| GTGTAGCGAGTGAAGTTACG+GGG | - | chr6.1:181493-181512 | None:intergenic | 50.0% | |
| GTTTCTCTTCCGCGCTTCTA+CGG | - | chr6.1:184342-184361 | None:intergenic | 50.0% | |
| TCCGTTTCTTCCGACTCCAA+TGG | + | chr6.1:182126-182145 | MS.gene82777:CDS | 50.0% | |
| TGAGTGCTCCCCAAGCAAAA+CGG | - | chr6.1:182418-182437 | None:intergenic | 50.0% | |
| TGGAACAAAGGATGTCGGAG+CGG | - | chr6.1:184386-184405 | None:intergenic | 50.0% | |
| TGGCCTACTGTCATGATCTC+AGG | + | chr6.1:181683-181702 | MS.gene82777:CDS | 50.0% | |
| TGTGACGTGGCGATTGTGAT+TGG | + | chr6.1:182217-182236 | MS.gene82777:CDS | 50.0% | |
| TTCAGAAGGAGCCAAGGACT+AGG | + | chr6.1:182641-182660 | MS.gene82777:CDS | 50.0% | |
| TTCCACAACGAACAATCCGC+CGG | + | chr6.1:181545-181564 | MS.gene82777:CDS | 50.0% | |
| TTCGGCGTCCAACACATGTT+CGG | + | chr6.1:181455-181474 | MS.gene82777:CDS | 50.0% | |
| TTGGACGCCGAATTGAGAGA+AGG | - | chr6.1:181447-181466 | None:intergenic | 50.0% | |
| ! | AGAAGCGCGGAAGAGAAACA+TGG | + | chr6.1:184343-184362 | MS.gene82777:CDS | 50.0% |
| ! | CCTTGTCGTTGCTGTTGAAG+GGG | + | chr6.1:182741-182760 | MS.gene82777:CDS | 50.0% |
| ! | CTAGGTTGGATGCTGGTACT+TGG | + | chr6.1:182659-182678 | MS.gene82777:CDS | 50.0% |
| ! | GAGAGGCCGTTGATTGTGTT+TGG | + | chr6.1:182040-182059 | MS.gene82777:CDS | 50.0% |
| ! | GATGGAAGCTTTTGGTGGGA+AGG | + | chr6.1:184426-184445 | MS.gene82777:CDS | 50.0% |
| ! | GCCTTGTCGTTGCTGTTGAA+GGG | + | chr6.1:182740-182759 | MS.gene82777:CDS | 50.0% |
| ! | GTTGCTGTTGAAGGGGATTC+TGG | + | chr6.1:182748-182767 | MS.gene82777:CDS | 50.0% |
| ! | TGCAGGGTACCACACTATGA+TGG | + | chr6.1:184408-184427 | MS.gene82777:CDS | 50.0% |
| ! | TGTGTTGGTGGATGTGAGCA+AGG | + | chr6.1:182303-182322 | MS.gene82777:CDS | 50.0% |
| !! | TGTTGGTTCAGAAGGAGCCA+AGG | + | chr6.1:182635-182654 | MS.gene82777:CDS | 50.0% |
| ACAGCAACGACAAGGCGATC+AGG | - | chr6.1:182736-182755 | None:intergenic | 55.0% | |
| AGGACCTGTGCGACGCAATT+CGG | - | chr6.1:181821-181840 | None:intergenic | 55.0% | |
| AGGGGGGATTTGGCATGCAT+TGG | + | chr6.1:182988-183007 | MS.gene82777:intron | 55.0% | |
| CAACACATGTTCGGCGTCGT+CGG | + | chr6.1:181464-181483 | MS.gene82777:CDS | 55.0% | |
| CAATCACCACCACAGGCAGT+TGG | - | chr6.1:184288-184307 | None:intergenic | 55.0% | |
| CATCCTCCCACTCTCAGAAC+CGG | - | chr6.1:184551-184570 | None:intergenic | 55.0% | |
| CCAACGGCACCACTAACACA+TGG | + | chr6.1:181663-181682 | MS.gene82777:CDS | 55.0% | |
| CCACTCTCAGAACCGGCATA+GGG | - | chr6.1:184544-184563 | None:intergenic | 55.0% | |
| CCAGCATCCAACCTAGTCCT+TGG | - | chr6.1:182655-182674 | None:intergenic | 55.0% | |
| CCCCTTCAACAGCAACGACA+AGG | - | chr6.1:182744-182763 | None:intergenic | 55.0% | |
| CTGGTACTTGGGGGACTATG+GGG | + | chr6.1:182671-182690 | MS.gene82777:CDS | 55.0% | |
| CTTCCGACTCCAATGGGGAA+GGG | + | chr6.1:182133-182152 | MS.gene82777:CDS | 55.0% | |
| GAAACGGATGCCGAGAGAGA+CGG | - | chr6.1:181519-181538 | None:intergenic | 55.0% | |
| GAACAAAGGATGTCGGAGCG+GGG | - | chr6.1:184384-184403 | None:intergenic | 55.0% | |
| GAAGGAGCCAAGGACTAGGT+TGG | + | chr6.1:182645-182664 | MS.gene82777:CDS | 55.0% | |
| GAGACGGTGAGGAAGATACC+GGG | - | chr6.1:181608-181627 | None:intergenic | 55.0% | |
| GCACCTTCAGAAACCACCAC+AGG | - | chr6.1:182589-182608 | None:intergenic | 55.0% | |
| GCAGCCAACGGATGATCATC+CGG | - | chr6.1:182166-182185 | None:intergenic | 55.0% | |
| GCGATCAGGATAAGCGACAG+CGG | - | chr6.1:182722-182741 | None:intergenic | 55.0% | |
| GCTCCTGTGGTGGTTTCTGA+AGG | + | chr6.1:182583-182602 | MS.gene82777:CDS | 55.0% | |
| GCTGGTACTTGGGGGACTAT+GGG | + | chr6.1:182670-182689 | MS.gene82777:CDS | 55.0% | |
| GGAACAAAGGATGTCGGAGC+GGG | - | chr6.1:184385-184404 | None:intergenic | 55.0% | |
| GGAGACGGTGAGGAAGATAC+CGG | - | chr6.1:181609-181628 | None:intergenic | 55.0% | |
| GGCAACAATCCCTTCCCCAT+TGG | - | chr6.1:182145-182164 | None:intergenic | 55.0% | |
| GGTATCTTCCTCACCGTCTC+CGG | + | chr6.1:181608-181627 | MS.gene82777:CDS | 55.0% | |
| GGTTGGATGCTGGTACTTGG+GGG | + | chr6.1:182662-182681 | MS.gene82777:CDS | 55.0% | |
| GTTGCCGGATGATCATCCGT+TGG | + | chr6.1:182159-182178 | MS.gene82777:CDS | 55.0% | |
| TCAGAAACCACCACAGGAGC+CGG | - | chr6.1:182583-182602 | None:intergenic | 55.0% | |
| TCTTCCGACTCCAATGGGGA+AGG | + | chr6.1:182132-182151 | MS.gene82777:CDS | 55.0% | |
| TGCTGGTACTTGGGGGACTA+TGG | + | chr6.1:182669-182688 | MS.gene82777:CDS | 55.0% | |
| TGGCATGCACTGAGCAGTGA+TGG | + | chr6.1:183093-183112 | MS.gene82777:intron | 55.0% | |
| TGGCGATTGTGATTGGTGCG+AGG | + | chr6.1:182224-182243 | MS.gene82777:CDS | 55.0% | |
| TGGTACTTGGGGGACTATGG+GGG | + | chr6.1:182672-182691 | MS.gene82777:CDS | 55.0% | |
| ! | CCAAGGACTAGGTTGGATGC+TGG | + | chr6.1:182652-182671 | MS.gene82777:CDS | 55.0% |
| ! | CGCCTTGTCGTTGCTGTTGA+AGG | + | chr6.1:182739-182758 | MS.gene82777:CDS | 55.0% |
| !! | AACCGGCGGATTGTTCGTTG+TGG | - | chr6.1:181550-181569 | None:intergenic | 55.0% |
| !! | ACCACCAGGTCGATTCGCAA+CGG | - | chr6.1:181852-181871 | None:intergenic | 55.0% |
| !! | CCATGTGTTAGTGGTGCCGT+TGG | - | chr6.1:181666-181685 | None:intergenic | 55.0% |
| !! | CCTATGCCGGTTCTGAGAGT+GGG | + | chr6.1:184542-184561 | MS.gene82777:CDS | 55.0% |
| !! | CTTGGGGAGCACTCATCCAT+GGG | + | chr6.1:182423-182442 | MS.gene82777:CDS | 55.0% |
| !! | GCGGCTAGGTCACTTGCTAT+TGG | + | chr6.1:182190-182209 | MS.gene82777:CDS | 55.0% |
| ACTTGGGGGACTATGGGGGT+TGG | + | chr6.1:182676-182695 | MS.gene82777:CDS | 60.0% | |
| CCCACTCTCAGAACCGGCAT+AGG | - | chr6.1:184545-184564 | None:intergenic | 60.0% | |
| CGACGACGCCGAACATGTGT+TGG | - | chr6.1:181466-181485 | None:intergenic | 60.0% | |
| CGGTGAGGAAGATACCGGGA+CGG | - | chr6.1:181604-181623 | None:intergenic | 60.0% | |
| GGAGGTGAGGTAGCCGTAAG+CGG | - | chr6.1:181582-181601 | None:intergenic | 60.0% | |
| GGTGAGGAAGATACCGGGAC+GGG | - | chr6.1:181603-181622 | None:intergenic | 60.0% | |
| GGTTACGCTGCCTCCGCTTA+CGG | + | chr6.1:181566-181585 | MS.gene82777:CDS | 60.0% | |
| GTAAGCGGAGGCAGCGTAAC+CGG | - | chr6.1:181567-181586 | None:intergenic | 60.0% | |
| TCCGTTGCGAATCGACCTGG+TGG | + | chr6.1:181848-181867 | MS.gene82777:CDS | 60.0% | |
| TCGGTACCAACTGCCTGTGG+TGG | + | chr6.1:184279-184298 | MS.gene82777:CDS | 60.0% | |
| ! | CACCGCGACCGACATCGTTT+TGG | - | chr6.1:181718-181737 | None:intergenic | 60.0% |
| ! | CGCTTCTGAGAAAGGCGGAG+AGG | + | chr6.1:182023-182042 | MS.gene82777:CDS | 60.0% |
| ! | GGTTCGGTACCAACTGCCTG+TGG | + | chr6.1:184276-184295 | MS.gene82777:CDS | 60.0% |
| ! | TGGTGGTGACCGTAGAAGCG+CGG | + | chr6.1:184330-184349 | MS.gene82777:CDS | 60.0% |
| !! | AGTGGTGCCGTTGGAGAGAC+CGG | - | chr6.1:181657-181676 | None:intergenic | 60.0% |
| !! | ATGCCGGTTCTGAGAGTGGG+AGG | + | chr6.1:184545-184564 | MS.gene82777:CDS | 60.0% |
| !! | CCCTATGCCGGTTCTGAGAG+TGG | + | chr6.1:184541-184560 | MS.gene82777:CDS | 60.0% |
| !! | GCTTGGGGAGCACTCATCCA+TGG | + | chr6.1:182422-182441 | MS.gene82777:CDS | 60.0% |
| !! | GGGACTATGGGGGTTGGTCT+TGG | + | chr6.1:182682-182701 | MS.gene82777:CDS | 60.0% |
| AACGCAACCGGGACCGGAGA+CGG | - | chr6.1:181624-181643 | None:intergenic | 65.0% | |
| ACCGTGAACGCAACCGGGAC+CGG | - | chr6.1:181630-181649 | None:intergenic | 65.0% | |
| AGATACCGGGACGGGAGGTG+AGG | - | chr6.1:181595-181614 | None:intergenic | 65.0% | |
| AGCAAGTGACCTAGCCGCGG+AGG | - | chr6.1:182188-182207 | None:intergenic | 65.0% | |
| AGGAAGTCCGGCTCCTGTGG+TGG | + | chr6.1:182573-182592 | MS.gene82777:CDS | 65.0% | |
| GAGGAAGATACCGGGACGGG+AGG | - | chr6.1:181600-181619 | None:intergenic | 65.0% | |
| GCGAGACCGTGAACGCAACC+GGG | - | chr6.1:181635-181654 | None:intergenic | 65.0% | |
| GCTACACGCGCCGTCTCTCT+CGG | + | chr6.1:181506-181525 | MS.gene82777:CDS | 65.0% | |
| GGCGAGACCGTGAACGCAAC+CGG | - | chr6.1:181636-181655 | None:intergenic | 65.0% | |
| GGTCTCGCCGGTCTCTCCAA+CGG | + | chr6.1:181647-181666 | MS.gene82777:CDS | 65.0% | |
| GGTGAGGTAGCCGTAAGCGG+AGG | - | chr6.1:181579-181598 | None:intergenic | 65.0% | |
| GGTTGCGTTCACGGTCTCGC+CGG | + | chr6.1:181635-181654 | MS.gene82777:CDS | 65.0% | |
| TCCGGTCCCGGTTGCGTTCA+CGG | + | chr6.1:181626-181645 | MS.gene82777:CDS | 65.0% | |
| TGGAGGAAGTCCGGCTCCTG+TGG | + | chr6.1:182570-182589 | MS.gene82777:CDS | 65.0% | |
| TTCCTCACCGTCTCCGGTCC+CGG | + | chr6.1:181614-181633 | MS.gene82777:CDS | 65.0% | |
| ! | TCATCCGTTGGCTGCCTCCG+CGG | + | chr6.1:182171-182190 | MS.gene82777:CDS | 65.0% |
| !! | GGGGAGCACTCATCCATGGG+TGG | + | chr6.1:182426-182445 | MS.gene82777:CDS | 65.0% |
| AACCGGGACCGGAGACGGTG+AGG | - | chr6.1:181619-181638 | None:intergenic | 70.0% | |
| AGCGGAGGCAGCGTAACCGG+CGG | - | chr6.1:181564-181583 | None:intergenic | 70.0% | |
| CTAGCCGCGGAGGCAGCCAA+CGG | - | chr6.1:182178-182197 | None:intergenic | 70.0% | |
| GGAGCGGGGTCCTCCTTGTG+AGG | - | chr6.1:184370-184389 | None:intergenic | 70.0% | |
| GGCTACCTCACCTCCCGTCC+CGG | + | chr6.1:181587-181606 | MS.gene82777:CDS | 70.0% | |
| ! | CGTTGGCTGCCTCCGCGGCT+AGG | + | chr6.1:182176-182195 | MS.gene82777:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 181407 | 184585 | 181407 | ID=MS.gene82777 |
| chr6.1 | mRNA | 181407 | 184585 | 181407 | ID=MS.gene82777.t1;Parent=MS.gene82777 |
| chr6.1 | exon | 181407 | 182798 | 181407 | ID=MS.gene82777.t1.exon1;Parent=MS.gene82777.t1 |
| chr6.1 | CDS | 181407 | 182798 | 181407 | ID=cds.MS.gene82777.t1;Parent=MS.gene82777.t1 |
| chr6.1 | exon | 184271 | 184585 | 184271 | ID=MS.gene82777.t1.exon2;Parent=MS.gene82777.t1 |
| chr6.1 | CDS | 184271 | 184585 | 184271 | ID=cds.MS.gene82777.t1;Parent=MS.gene82777.t1 |
| Gene Sequence |
| Protein sequence |
