Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85604.t1 | RHN76190.1 | 94.1 | 656 | 37 | 2 | 1 | 654 | 851 | 1506 | 0.00E+00 | 1226.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85604.t1 | A0A072VBT1 | 94.1 | 656 | 37 | 2 | 1 | 654 | 644 | 1299 | 0.0e+00 | 1226.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene85604 | 0.832258 | 1.05E-55 | -1.69E-46 |
| MS.gene049501 | MS.gene85604 | 0.827551 | 1.47E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene85604 | 0.831204 | 1.91E-55 | -1.69E-46 |
| MS.gene049979 | MS.gene85604 | 0.819395 | 1.19E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene85604 | 0.828688 | 7.82E-55 | -1.69E-46 |
| MS.gene050438 | MS.gene85604 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene85604 | 0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene85604 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene050815 | MS.gene85604 | 0.837691 | 4.48E-57 | -1.69E-46 |
| MS.gene050844 | MS.gene85604 | 0.807448 | 5.03E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene85604 | 0.803812 | 2.92E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene85604 | 0.813034 | 3.14E-51 | -1.69E-46 |
| MS.gene051328 | MS.gene85604 | 0.810615 | 1.06E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene85604 | 0.80338 | 3.58E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene85604 | 0.824284 | 8.77E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene85604 | 0.803872 | 2.83E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene85604 | 0.800189 | 1.62E-48 | -1.69E-46 |
| MS.gene052020 | MS.gene85604 | 0.891043 | 5.69E-74 | -1.69E-46 |
| MS.gene052516 | MS.gene85604 | 0.809467 | 1.87E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene85604 | 0.814195 | 1.74E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene85604 | 0.840917 | 6.51E-58 | -1.69E-46 |
| MS.gene052612 | MS.gene85604 | 0.814267 | 1.68E-51 | -1.69E-46 |
| MS.gene052613 | MS.gene85604 | 0.818508 | 1.89E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene85604 | 0.860258 | 2.34E-63 | -1.69E-46 |
| MS.gene052896 | MS.gene85604 | 0.834788 | 2.45E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene85604 | 0.814273 | 1.68E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene85604 | 0.80032 | 1.52E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene85604 | 0.808628 | 2.82E-50 | -1.69E-46 |
| MS.gene053967 | MS.gene85604 | 0.806961 | 6.38E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene85604 | 0.826608 | 2.47E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene85604 | 0.840626 | 7.76E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene85604 | 0.811735 | 6.03E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene85604 | 0.83068 | 2.56E-55 | -1.69E-46 |
| MS.gene056542 | MS.gene85604 | 0.816406 | 5.62E-52 | -1.69E-46 |
| MS.gene056543 | MS.gene85604 | 0.821523 | 3.86E-53 | -1.69E-46 |
| MS.gene056545 | MS.gene85604 | 0.822973 | 1.78E-53 | -1.69E-46 |
| MS.gene056553 | MS.gene85604 | 0.822755 | 2.00E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene85604 | 0.80342 | 3.52E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene85604 | 0.812912 | 3.34E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene85604 | 0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene85604 | 0.819343 | 1.22E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene85604 | 0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene058636 | MS.gene85604 | 0.817359 | 3.44E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene85604 | 0.816548 | 5.23E-52 | -1.69E-46 |
| MS.gene059937 | MS.gene85604 | 0.836113 | 1.13E-56 | -1.69E-46 |
| MS.gene060322 | MS.gene85604 | 0.813359 | 2.66E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene85604 | 0.804145 | 2.49E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene85604 | 0.823662 | 1.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85604.t1 | MTR_2g098830 | 94.055 | 656 | 37 | 2 | 1 | 654 | 644 | 1299 | 0.0 | 1285 |
| MS.gene85604.t1 | MTR_2g098830 | 64.327 | 171 | 60 | 1 | 321 | 490 | 474 | 644 | 2.29e-58 | 214 |
| MS.gene85604.t1 | MTR_2g098830 | 46.667 | 195 | 63 | 3 | 269 | 422 | 8 | 202 | 4.64e-39 | 155 |
| MS.gene85604.t1 | MTR_2g098830 | 71.429 | 56 | 16 | 0 | 329 | 384 | 230 | 285 | 2.60e-15 | 80.5 |
| MS.gene85604.t1 | MTR_2g098830 | 48.889 | 90 | 45 | 1 | 321 | 409 | 348 | 437 | 3.74e-14 | 77.0 |
| MS.gene85604.t1 | MTR_2g098830 | 52.439 | 82 | 38 | 1 | 329 | 409 | 293 | 374 | 6.26e-14 | 76.3 |
| MS.gene85604.t1 | MTR_2g098830 | 94.055 | 656 | 37 | 2 | 1 | 654 | 911 | 1566 | 0.0 | 1284 |
| MS.gene85604.t1 | MTR_2g098830 | 63.983 | 472 | 117 | 7 | 1 | 422 | 1 | 469 | 0.0 | 560 |
| MS.gene85604.t1 | MTR_2g098830 | 64.327 | 171 | 60 | 1 | 321 | 490 | 741 | 911 | 1.65e-58 | 214 |
| MS.gene85604.t1 | MTR_2g098830 | 71.429 | 56 | 16 | 0 | 329 | 384 | 497 | 552 | 2.59e-15 | 80.5 |
| MS.gene85604.t1 | MTR_2g098830 | 48.889 | 90 | 45 | 1 | 321 | 409 | 615 | 704 | 3.65e-14 | 77.0 |
| MS.gene85604.t1 | MTR_2g098830 | 52.439 | 82 | 38 | 1 | 329 | 409 | 560 | 641 | 5.90e-14 | 76.3 |
| MS.gene85604.t1 | MTR_4g067090 | 55.287 | 662 | 269 | 11 | 1 | 655 | 2 | 643 | 0.0 | 681 |
| MS.gene85604.t1 | MTR_2g098720 | 66.301 | 365 | 122 | 1 | 1 | 365 | 1 | 364 | 9.91e-165 | 478 |
| MS.gene85604.t1 | MTR_2g098710 | 63.836 | 365 | 122 | 4 | 7 | 365 | 6 | 366 | 6.18e-156 | 456 |
| MS.gene85604.t1 | MTR_2g098730 | 53.738 | 428 | 145 | 6 | 1 | 428 | 1 | 375 | 6.11e-143 | 423 |
| MS.gene85604.t1 | MTR_0002s1280 | 61.128 | 337 | 89 | 3 | 1 | 334 | 1 | 298 | 1.86e-133 | 395 |
| MS.gene85604.t1 | MTR_2g098770 | 47.465 | 434 | 125 | 9 | 1 | 428 | 1 | 337 | 1.25e-108 | 333 |
| MS.gene85604.t1 | MTR_8g463810 | 77.778 | 63 | 14 | 0 | 354 | 416 | 31 | 93 | 5.38e-25 | 108 |
| MS.gene85604.t1 | MTR_2g098740 | 58.065 | 62 | 26 | 0 | 4 | 65 | 23 | 84 | 2.59e-14 | 70.1 |
| MS.gene85604.t1 | MTR_2g098780 | 53.846 | 65 | 30 | 0 | 1 | 65 | 1 | 65 | 8.09e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85604.t1 | AT1G05950 | 44.444 | 306 | 137 | 6 | 4 | 308 | 14 | 287 | 7.66e-74 | 248 |
| MS.gene85604.t1 | AT1G05950 | 48.810 | 84 | 39 | 1 | 469 | 552 | 444 | 523 | 1.36e-13 | 74.3 |
| MS.gene85604.t1 | AT1G05950 | 44.444 | 306 | 137 | 6 | 4 | 308 | 14 | 287 | 1.44e-73 | 248 |
| MS.gene85604.t1 | AT1G05950 | 42.857 | 119 | 61 | 2 | 469 | 587 | 444 | 555 | 1.02e-14 | 77.8 |
| MS.gene85604.t1 | AT1G05950 | 44.444 | 306 | 137 | 6 | 4 | 308 | 14 | 287 | 1.44e-73 | 248 |
| MS.gene85604.t1 | AT1G05950 | 42.857 | 119 | 61 | 2 | 469 | 587 | 444 | 555 | 1.02e-14 | 77.8 |
| MS.gene85604.t1 | AT1G05950 | 44.444 | 306 | 137 | 6 | 4 | 308 | 14 | 287 | 4.26e-73 | 248 |
| MS.gene85604.t1 | AT1G05950 | 45.395 | 152 | 76 | 2 | 469 | 620 | 444 | 588 | 7.83e-28 | 119 |
| MS.gene85604.t1 | AT1G05950 | 44.444 | 306 | 137 | 6 | 4 | 308 | 14 | 287 | 7.81e-73 | 247 |
| MS.gene85604.t1 | AT1G05950 | 43.038 | 158 | 83 | 2 | 469 | 626 | 444 | 594 | 4.48e-25 | 110 |
Find 106 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAGAATTTGTGGCATTTA+AGG | 0.143029 | 2.4:-5283483 | MS.gene85604:CDS |
| CAAGCTACTGTAAGAGTTAA+AGG | 0.144942 | 2.4:-5278790 | MS.gene85604:CDS |
| CCTTCTTACTGTCGACTAAA+AGG | 0.232115 | 2.4:+5283249 | None:intergenic |
| GAATATGTCATGAAAATAAT+TGG | 0.240093 | 2.4:-5278988 | MS.gene85604:CDS |
| TGTTGGAACTATTTGCATTC+AGG | 0.252524 | 2.4:+5280482 | None:intergenic |
| TAGTATTGATATTATGCTTT+TGG | 0.260280 | 2.4:-5282640 | MS.gene85604:CDS |
| ACTTTCTGCTGTTGAGATAT+TGG | 0.266453 | 2.4:+5284602 | None:intergenic |
| TAATCTCAGACTGGATTTCT+AGG | 0.277824 | 2.4:-5281612 | MS.gene85604:intron |
| TCTGAGATTATTTCGGAATA+AGG | 0.286569 | 2.4:+5281625 | None:intergenic |
| CTTTCAATTAAATCTTTGAT+AGG | 0.306694 | 2.4:+5282519 | None:intergenic |
| CCTTTGAAGCTATGAAAGTT+TGG | 0.321313 | 2.4:+5280443 | None:intergenic |
| GATTCTGTCACTTCATGCTT+TGG | 0.327638 | 2.4:+5281343 | None:intergenic |
| ATTCTGTCACTTCATGCTTT+GGG | 0.332520 | 2.4:+5281344 | None:intergenic |
| ATGGGCCATCCCTCTATATC+TGG | 0.332584 | 2.4:+5283287 | None:intergenic |
| GGAAAGTTACACTGTGTATT+CGG | 0.348170 | 2.4:-5282619 | MS.gene85604:CDS |
| ACCGTTACAGCCTTCTATAA+TGG | 0.369036 | 2.4:+5279575 | None:intergenic |
| ACAGCAGAAAGTTGCAAAAC+AGG | 0.369097 | 2.4:-5284591 | MS.gene85604:intron |
| AATCCAGTCTGAGATTATTT+CGG | 0.378818 | 2.4:+5281618 | None:intergenic |
| GCTACTTTAGTATCACTTCC+TGG | 0.382812 | 2.4:+5281277 | None:intergenic |
| GCATAGTGCCAATACTTTAC+AGG | 0.385936 | 2.4:-5281131 | MS.gene85604:CDS |
| TTGATCTTGCAGGAACTAGA+TGG | 0.390794 | 2.4:-5279010 | MS.gene85604:intron |
| GTCCTACTGTGGATGCAGTT+AGG | 0.395558 | 2.4:-5284688 | MS.gene85604:CDS |
| GCATCCAGAGCTAGAATTTG+TGG | 0.406085 | 2.4:-5283492 | MS.gene85604:CDS |
| TGTCAAGGAAGACTGGGATA+TGG | 0.407345 | 2.4:-5281203 | MS.gene85604:CDS |
| AAGTTAGAATCCATTATAGA+AGG | 0.407710 | 2.4:-5279585 | MS.gene85604:CDS |
| CAAGTTTCTGAAGATACAAA+TGG | 0.414948 | 2.4:-5283149 | MS.gene85604:CDS |
| AGCACAAGAGCCAAAATTAG+AGG | 0.415770 | 2.4:+5278654 | None:intergenic |
| TCAACGAGGTCAGTTTGATC+AGG | 0.416526 | 2.4:+5283395 | None:intergenic |
| GAAGCCTTTGCTGGCAGCAT+TGG | 0.419671 | 2.4:+5284641 | None:intergenic |
| GTTGGAACTATTTGCATTCA+GGG | 0.426572 | 2.4:+5280483 | None:intergenic |
| TCCTACTGTGGATGCAGTTA+GGG | 0.428934 | 2.4:-5284687 | MS.gene85604:CDS |
| GTTCCACCACTGATGGGGTA+TGG | 0.442038 | 2.4:-5283205 | MS.gene85604:CDS |
| CACTTTGCAAAGTCCGTGCC+AGG | 0.445701 | 2.4:-5279457 | MS.gene85604:intron |
| TTCACTTACCTGTAAAGTAT+TGG | 0.447276 | 2.4:+5281123 | None:intergenic |
| GTGATTCTGTCAAGGAAGAC+TGG | 0.454947 | 2.4:-5281210 | MS.gene85604:CDS |
| GATCTTCTCAAGATTTGTGT+TGG | 0.457122 | 2.4:+5280465 | None:intergenic |
| AATGCCACAAATTCTAGCTC+TGG | 0.460242 | 2.4:+5283488 | None:intergenic |
| AGAATCACGTGTAAGTAGTA+AGG | 0.460672 | 2.4:-5281326 | MS.gene85604:CDS |
| TCACGGCTAGAAGCCTTTGC+TGG | 0.462181 | 2.4:+5284632 | None:intergenic |
| TAGGGCATTCGTTGAACACT+TGG | 0.464155 | 2.4:-5284669 | MS.gene85604:CDS |
| CCAAACTTTCATAGCTTCAA+AGG | 0.473411 | 2.4:-5280443 | MS.gene85604:CDS |
| CAAACTTTCATAGCTTCAAA+GGG | 0.477401 | 2.4:-5280442 | MS.gene85604:CDS |
| GATGAACTTCAAACCTTGCT+AGG | 0.486232 | 2.4:+5281046 | None:intergenic |
| AGTTGGTTATTCTGCTGTAA+AGG | 0.487889 | 2.4:-5283045 | MS.gene85604:CDS |
| ATGGTTGTGGTATAACTATA+CGG | 0.491124 | 2.4:-5281234 | MS.gene85604:CDS |
| TGCTCACAGTCGACAGCTGA+TGG | 0.492405 | 2.4:-5282555 | MS.gene85604:CDS |
| TCTTCAGCAGCGCGCGATAG+AGG | 0.496928 | 2.4:-5280190 | MS.gene85604:CDS |
| ATTGATCTTGATAACAAGCC+AGG | 0.497827 | 2.4:-5281295 | MS.gene85604:CDS |
| TCAATGCTCTTATACGAAAG+AGG | 0.506318 | 2.4:-5280396 | MS.gene85604:CDS |
| ATCTCTTGCTTCGCGAGGAA+AGG | 0.507021 | 2.4:+5278729 | None:intergenic |
| GTCTTGTACATTCATTTGAG+TGG | 0.508347 | 2.4:+5281068 | None:intergenic |
| GGTACATGGTTAAGAAATCA+AGG | 0.515023 | 2.4:-5279555 | MS.gene85604:CDS |
| ATTGGATTGCCAGGCTGAGA+AGG | 0.517463 | 2.4:-5280614 | MS.gene85604:intron |
| TTTGAGTGGTGTTGCACCGA+TGG | 0.517852 | 2.4:+5281082 | None:intergenic |
| TAGAAGGCTGTAACGGTACA+TGG | 0.518312 | 2.4:-5279569 | MS.gene85604:CDS |
| GATAGAGATACACTATAAGT+TGG | 0.520216 | 2.4:+5278959 | None:intergenic |
| CAACGAGGTCAGTTTGATCA+GGG | 0.524231 | 2.4:+5283396 | None:intergenic |
| TTCTGCTGTTGAGATATTGG+AGG | 0.535331 | 2.4:+5284605 | None:intergenic |
| GAGATACACTATAAGTTGGT+AGG | 0.538498 | 2.4:+5278963 | None:intergenic |
| CTATCAAAGATTTAATTGAA+AGG | 0.539397 | 2.4:-5282518 | MS.gene85604:intron |
| GTTGACCAAATTTAGAAGTG+TGG | 0.541024 | 2.4:-5278689 | MS.gene85604:CDS |
| GACTTTGAGTATTCGTGCGA+GGG | 0.544336 | 2.4:-5278763 | MS.gene85604:CDS |
| TTCATATATATTAACAACGC+TGG | 0.548393 | 2.4:+5283431 | None:intergenic |
| TGATCCAATGCTGCCAGCAA+AGG | 0.549274 | 2.4:-5284645 | MS.gene85604:CDS |
| AAAATTCAGAGATGGTTAGC+TGG | 0.549868 | 2.4:-5280144 | MS.gene85604:intron |
| CAGAAAGAGAACAATGGTTG+TGG | 0.553769 | 2.4:-5281247 | MS.gene85604:CDS |
| GGAAGACTGGGATATGGATG+TGG | 0.567799 | 2.4:-5281197 | MS.gene85604:CDS |
| AAGTTTCTGAAGATACAAAT+GGG | 0.569815 | 2.4:-5283148 | MS.gene85604:CDS |
| TAGTTTGCAAGATTCAAAGC+TGG | 0.573315 | 2.4:-5281380 | MS.gene85604:CDS |
| ATTCCGAAATAATCTCAGAC+TGG | 0.575612 | 2.4:-5281621 | MS.gene85604:CDS |
| GCTCACAGTCGACAGCTGAT+GGG | 0.576900 | 2.4:-5282554 | MS.gene85604:CDS |
| GCTCTTATACGAAAGAGGAA+TGG | 0.578484 | 2.4:-5280391 | MS.gene85604:CDS |
| TGAATGTACAAGACCTAGCA+AGG | 0.579652 | 2.4:-5281059 | MS.gene85604:intron |
| GAATCACGTGTAAGTAGTAA+GGG | 0.585414 | 2.4:-5281325 | MS.gene85604:CDS |
| TGTATCTTCAGAAACTTGAT+CGG | 0.587578 | 2.4:+5283154 | None:intergenic |
| TCCATTATAGAAGGCTGTAA+CGG | 0.587717 | 2.4:-5279576 | MS.gene85604:CDS |
| TCAAACTGACCTCGTTGATG+TGG | 0.592152 | 2.4:-5283390 | MS.gene85604:CDS |
| CATGGTTAAGAAATCAAGGA+AGG | 0.596747 | 2.4:-5279551 | MS.gene85604:CDS |
| TATAGTGTATCTCTATCAGA+TGG | 0.596779 | 2.4:-5278953 | MS.gene85604:intron |
| TATACGAAAGAGGAATGGAC+TGG | 0.597795 | 2.4:-5280386 | MS.gene85604:intron |
| AGAAAGCACATCACTGAGGG+TGG | 0.598680 | 2.4:-5280580 | MS.gene85604:CDS |
| TCTGCTGTAAAGGAAGCTAC+CGG | 0.601256 | 2.4:-5283035 | MS.gene85604:intron |
| ATCTGATGTGTGTCCTACTG+TGG | 0.606281 | 2.4:-5284699 | MS.gene85604:CDS |
| GCGCGCGATAGAGGATGAGA+TGG | 0.608807 | 2.4:-5280181 | MS.gene85604:CDS |
| GTAATATGAAAATTCAGAGA+TGG | 0.610374 | 2.4:-5280152 | MS.gene85604:CDS |
| AGAACATGTCTTGCCTGGCA+CGG | 0.612050 | 2.4:+5279444 | None:intergenic |
| AAAAGAAAGCACATCACTGA+GGG | 0.612477 | 2.4:-5280583 | MS.gene85604:CDS |
| TGATTCTGTCAAGGAAGACT+GGG | 0.612643 | 2.4:-5281209 | MS.gene85604:CDS |
| GCACAAGAGCCAAAATTAGA+GGG | 0.616086 | 2.4:+5278655 | None:intergenic |
| TGACCATACCCCATCAGTGG+TGG | 0.620761 | 2.4:+5283202 | None:intergenic |
| GGACTTTGAGTATTCGTGCG+AGG | 0.621197 | 2.4:-5278764 | MS.gene85604:CDS |
| GAGATATTGGAGGTGCATCA+CGG | 0.628198 | 2.4:+5284615 | None:intergenic |
| TATACGGTGTGATTCTGTCA+AGG | 0.633610 | 2.4:-5281218 | MS.gene85604:CDS |
| GCTGAATCTCTTGCTTCGCG+AGG | 0.639784 | 2.4:+5278724 | None:intergenic |
| TCAAAAGATAGAAAATCCAT+CGG | 0.640466 | 2.4:-5281098 | MS.gene85604:CDS |
| TAAGAGTAAAAGATTGACAG+AGG | 0.645315 | 2.4:-5279487 | MS.gene85604:CDS |
| CTGACCTCGTTGATGTGGAG+CGG | 0.656253 | 2.4:-5283385 | MS.gene85604:CDS |
| TTTCGGAATAAGGAAGCACG+TGG | 0.656466 | 2.4:+5281635 | None:intergenic |
| CACTGACCATACCCCATCAG+TGG | 0.656521 | 2.4:+5283199 | None:intergenic |
| ATGTTCCAGATATAGAGGGA+TGG | 0.660253 | 2.4:-5283292 | MS.gene85604:CDS |
| CTTAATCAGAAAGAGAACAA+TGG | 0.663283 | 2.4:-5281253 | MS.gene85604:CDS |
| GCCCTAACTGCATCCACAGT+AGG | 0.676357 | 2.4:+5284686 | None:intergenic |
| TACTGTAAGAGTTAAAGGAG+TGG | 0.676898 | 2.4:-5278785 | MS.gene85604:CDS |
| AAACTTTCATAGCTTCAAAG+GGG | 0.703519 | 2.4:-5280441 | MS.gene85604:CDS |
| GTGGAAGTACTCGACAACTG+AGG | 0.740853 | 2.4:+5281654 | None:intergenic |
| GCTGCCGCTCCACATCAACG+AGG | 0.812823 | 2.4:+5283381 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAAATATAAAATGTTA+TGG | + | chr2.4:5281630-5281649 | None:intergenic | 10.0% |
| !! | CAAAAAAAAATTTAACAATT+TGG | + | chr2.4:5283415-5283434 | None:intergenic | 10.0% |
| !! | CAGTTAATTTAAAAAATTAT+CGG | + | chr2.4:5283634-5283653 | None:intergenic | 10.0% |
| !! | CTATATATGTAAATAAATAT+TGG | + | chr2.4:5282699-5282718 | None:intergenic | 10.0% |
| !!! | CTTAAGATTAATTTTTTTTT+AGG | - | chr2.4:5279360-5279379 | MS.gene85604:intron | 10.0% |
| !! | AAAAAATTTCTTAGCAAAAA+AGG | + | chr2.4:5282645-5282664 | None:intergenic | 15.0% |
| !! | AACAATATTGAACAAAAAAA+TGG | + | chr2.4:5278874-5278893 | None:intergenic | 15.0% |
| !! | AAGAATAACAAATTATGTAT+CGG | + | chr2.4:5280542-5280561 | None:intergenic | 15.0% |
| !! | ATAATCTTAGATAAATGTAA+AGG | + | chr2.4:5283132-5283151 | None:intergenic | 15.0% |
| !! | TAAATTATGTTTAGATTCTA+TGG | - | chr2.4:5282466-5282485 | MS.gene85604:intron | 15.0% |
| !!! | AGTATATAAAATGTTTTAAG+AGG | - | chr2.4:5284169-5284188 | MS.gene85604:intron | 15.0% |
| !!! | ATCAAATTACAATTTTGTAT+TGG | + | chr2.4:5281289-5281308 | None:intergenic | 15.0% |
| !! | AATTTATGAAATCCAAATAC+TGG | + | chr2.4:5283438-5283457 | None:intergenic | 20.0% |
| !! | ATAGTTTCTAATAATAGCTA+TGG | + | chr2.4:5280377-5280396 | None:intergenic | 20.0% |
| !! | CTATCAAAGATTTAATTGAA+AGG | - | chr2.4:5280840-5280859 | MS.gene85604:intron | 20.0% |
| !! | CTTTCAATTAAATCTTTGAT+AGG | + | chr2.4:5280842-5280861 | None:intergenic | 20.0% |
| !! | GAATATGTCATGAAAATAAT+TGG | - | chr2.4:5284370-5284389 | MS.gene85604:intron | 20.0% |
| !! | GTAGGATAAATATTTAGTAT+GGG | - | chr2.4:5284073-5284092 | MS.gene85604:intron | 20.0% |
| !! | TATAATCCTGTAAAAAATAG+AGG | - | chr2.4:5279383-5279402 | MS.gene85604:intron | 20.0% |
| !! | TGTAGGATAAATATTTAGTA+TGG | - | chr2.4:5284072-5284091 | MS.gene85604:intron | 20.0% |
| !! | TTTCAAATCTTTAAACAACT+TGG | - | chr2.4:5279289-5279308 | MS.gene85604:intron | 20.0% |
| !!! | AATTTTTTTTTGCCAGTATT+TGG | - | chr2.4:5283423-5283442 | MS.gene85604:CDS | 20.0% |
| !!! | AGACAAGGTTTTAATTAAAA+GGG | + | chr2.4:5279646-5279665 | None:intergenic | 20.0% |
| !!! | ATCTTACGATTTGTTATATT+TGG | - | chr2.4:5284521-5284540 | MS.gene85604:intron | 20.0% |
| !!! | ATTTACTATTTTACAAGAAC+CGG | + | chr2.4:5281255-5281274 | None:intergenic | 20.0% |
| !!! | ATTTGGTAATTAACTTTTGA+AGG | - | chr2.4:5284538-5284557 | MS.gene85604:intron | 20.0% |
| !!! | CAACTTTTTATGAATTTGTT+TGG | - | chr2.4:5281070-5281089 | MS.gene85604:CDS | 20.0% |
| !!! | TAGTATTGATATTATGCTTT+TGG | - | chr2.4:5280718-5280737 | MS.gene85604:intron | 20.0% |
| !!! | TCAACATTATTGATTATAAG+AGG | + | chr2.4:5283004-5283023 | None:intergenic | 20.0% |
| !!! | TTTCCATTTTATGTTTTCTT+TGG | - | chr2.4:5281888-5281907 | MS.gene85604:intron | 20.0% |
| !!! | TTTCTTTAAAAAGATGCATT+CGG | + | chr2.4:5284269-5284288 | None:intergenic | 20.0% |
| !!! | TTTTAATTAAAAGGGATTGT+TGG | + | chr2.4:5279638-5279657 | None:intergenic | 20.0% |
| ! | AAAAAATGTTCCAGATATAG+AGG | - | chr2.4:5280061-5280080 | MS.gene85604:intron | 25.0% |
| ! | AAAAATGTTCCAGATATAGA+GGG | - | chr2.4:5280062-5280081 | MS.gene85604:intron | 25.0% |
| ! | AAGTACTTATACAAAGATGA+AGG | + | chr2.4:5284317-5284336 | None:intergenic | 25.0% |
| ! | AAGTTAGAATCCATTATAGA+AGG | - | chr2.4:5283773-5283792 | MS.gene85604:intron | 25.0% |
| ! | AATGTAAGATGCAATTTACT+AGG | - | chr2.4:5279491-5279510 | MS.gene85604:CDS | 25.0% |
| ! | AATTCAATTCAGTTACATGA+AGG | - | chr2.4:5281370-5281389 | MS.gene85604:CDS | 25.0% |
| ! | ACAGGTCGAATAAAATTTAA+AGG | + | chr2.4:5283097-5283116 | None:intergenic | 25.0% |
| ! | ACATGCTTGCTTAATTTATA+TGG | - | chr2.4:5279447-5279466 | MS.gene85604:intron | 25.0% |
| ! | AGAAAAATATCGCATTTAGT+TGG | + | chr2.4:5283593-5283612 | None:intergenic | 25.0% |
| ! | AGTACTTATACAAAGATGAA+GGG | + | chr2.4:5284316-5284335 | None:intergenic | 25.0% |
| ! | ATAATTTAATACTATGTGCC+GGG | + | chr2.4:5282454-5282473 | None:intergenic | 25.0% |
| ! | ATCATTTCAAATAATGACCT+AGG | + | chr2.4:5278846-5278865 | None:intergenic | 25.0% |
| ! | ATGTAAGATGCAATTTACTA+GGG | - | chr2.4:5279492-5279511 | MS.gene85604:CDS | 25.0% |
| ! | ATTCAGAATCCTACAAAAAA+CGG | - | chr2.4:5280263-5280282 | MS.gene85604:intron | 25.0% |
| ! | ATTGAAAGGTTCGTTATAAT+TGG | - | chr2.4:5280854-5280873 | MS.gene85604:intron | 25.0% |
| ! | CATAATTTAATACTATGTGC+CGG | + | chr2.4:5282455-5282474 | None:intergenic | 25.0% |
| ! | GATATTAACCTCGAAATATA+TGG | + | chr2.4:5280520-5280539 | None:intergenic | 25.0% |
| ! | GCATAATTGGAAAACTTAAA+AGG | + | chr2.4:5280476-5280495 | None:intergenic | 25.0% |
| ! | GGAAAATTAATCAAACTGAA+TGG | + | chr2.4:5280980-5280999 | None:intergenic | 25.0% |
| ! | GTAATATGAAAATTCAGAGA+TGG | - | chr2.4:5283206-5283225 | MS.gene85604:CDS | 25.0% |
| ! | GTTCCAAAGAAAACATAAAA+TGG | + | chr2.4:5281894-5281913 | None:intergenic | 25.0% |
| ! | TAAAGGTCCATAAAATAAAC+AGG | + | chr2.4:5283115-5283134 | None:intergenic | 25.0% |
| ! | TAATGACAAACAACCAATAA+AGG | + | chr2.4:5283248-5283267 | None:intergenic | 25.0% |
| ! | TAATTGCGTTCTTATGTTAA+CGG | + | chr2.4:5278962-5278981 | None:intergenic | 25.0% |
| ! | TACTGTAAATCGATCTAAAT+CGG | + | chr2.4:5281804-5281823 | None:intergenic | 25.0% |
| ! | TCAAAAGATAGAAAATCCAT+CGG | - | chr2.4:5282260-5282279 | MS.gene85604:intron | 25.0% |
| ! | TCAATACTTTAATATTTGCC+CGG | - | chr2.4:5281233-5281252 | MS.gene85604:CDS | 25.0% |
| ! | TGATTGTATAATGATCTACT+TGG | - | chr2.4:5281163-5281182 | MS.gene85604:CDS | 25.0% |
| ! | TGGAAATGAGAAATAATTTG+AGG | + | chr2.4:5281874-5281893 | None:intergenic | 25.0% |
| ! | TGTTCAAATAATGAATAACG+AGG | + | chr2.4:5279786-5279805 | None:intergenic | 25.0% |
| ! | TTACTTGTAGTTAAAATCAC+AGG | - | chr2.4:5280413-5280432 | MS.gene85604:CDS | 25.0% |
| ! | TTAGAAGTGAAAACAATTCT+TGG | + | chr2.4:5281040-5281059 | None:intergenic | 25.0% |
| ! | TTATATATCCTCTTGATCAT+TGG | + | chr2.4:5284115-5284134 | None:intergenic | 25.0% |
| ! | TTCATATATATTAACAACGC+TGG | + | chr2.4:5279930-5279949 | None:intergenic | 25.0% |
| ! | TTGGAAATGAAACATTAAAG+TGG | - | chr2.4:5279571-5279590 | MS.gene85604:CDS | 25.0% |
| ! | TTTGGATTGCTATAACAAAA+GGG | + | chr2.4:5278815-5278834 | None:intergenic | 25.0% |
| !! | AAGTTTCTGAAGATACAAAT+GGG | - | chr2.4:5280210-5280229 | MS.gene85604:intron | 25.0% |
| !! | AATCTTTTACTCTTAACAGA+TGG | + | chr2.4:5283866-5283885 | None:intergenic | 25.0% |
| !! | ACAAAGTATACTTGACTTTT+CGG | + | chr2.4:5281010-5281029 | None:intergenic | 25.0% |
| !! | AGTTGTTCTACTTGATATTT+TGG | - | chr2.4:5279552-5279571 | MS.gene85604:CDS | 25.0% |
| !! | ATATATAAATGGTAGTGTAG+AGG | + | chr2.4:5283678-5283697 | None:intergenic | 25.0% |
| !! | TACTGAATCATTTTCAAAAG+TGG | + | chr2.4:5282845-5282864 | None:intergenic | 25.0% |
| !! | TATGTTTTCCATATATTTCG+AGG | - | chr2.4:5280509-5280528 | MS.gene85604:CDS | 25.0% |
| !! | TATTGTTATTATTCTCTGCT+TGG | - | chr2.4:5278887-5278906 | MS.gene85604:intron | 25.0% |
| !! | TATTTTTCTGTTGTGCAATA+TGG | - | chr2.4:5283604-5283623 | MS.gene85604:intron | 25.0% |
| !! | TTGAAATTTTTGTACAGCTA+GGG | + | chr2.4:5279275-5279294 | None:intergenic | 25.0% |
| !! | TTTACTATTTTACAAGAACC+GGG | + | chr2.4:5281254-5281273 | None:intergenic | 25.0% |
| !!! | AATTTGCCTCTATTTTTTAC+AGG | + | chr2.4:5279392-5279411 | None:intergenic | 25.0% |
| !!! | AATTTGTTTTCATCTTCACA+TGG | + | chr2.4:5283704-5283723 | None:intergenic | 25.0% |
| !!! | ACATTTAATCCGTTTTTTGT+AGG | + | chr2.4:5280275-5280294 | None:intergenic | 25.0% |
| !!! | AGTTTTGTAAATGCATAATC+CGG | - | chr2.4:5284001-5284020 | MS.gene85604:intron | 25.0% |
| !!! | ATTTATCTTTTGATAGCTTC+CGG | - | chr2.4:5281641-5281660 | MS.gene85604:CDS | 25.0% |
| !!! | CTCGTAATTTATGTTTTAAC+TGG | - | chr2.4:5280641-5280660 | MS.gene85604:intron | 25.0% |
| !!! | GAGACAAGGTTTTAATTAAA+AGG | + | chr2.4:5279647-5279666 | None:intergenic | 25.0% |
| !!! | TATTCGACCTGTTTATTTTA+TGG | - | chr2.4:5283105-5283124 | MS.gene85604:CDS | 25.0% |
| !!! | TGACATTCTTTACTTTTAGA+TGG | + | chr2.4:5282204-5282223 | None:intergenic | 25.0% |
| !!! | TTTGAAATTTTTGTACAGCT+AGG | + | chr2.4:5279276-5279295 | None:intergenic | 25.0% |
| AAAACAATTTCACCATGATG+AGG | - | chr2.4:5279106-5279125 | MS.gene85604:intron | 30.0% | |
| AAAAGAGAAAAAACTGACAC+GGG | + | chr2.4:5280453-5280472 | None:intergenic | 30.0% | |
| AAAATTCTGTTTGATCTTGC+AGG | - | chr2.4:5284338-5284357 | MS.gene85604:intron | 30.0% | |
| AAACTTTCATAGCTTCAAAG+GGG | - | chr2.4:5282917-5282936 | MS.gene85604:intron | 30.0% | |
| AAGATTATGTTTCTTTGAGC+AGG | - | chr2.4:5283144-5283163 | MS.gene85604:CDS | 30.0% | |
| AAGGTTCGTTATAATTGGTA+TGG | - | chr2.4:5280859-5280878 | MS.gene85604:intron | 30.0% | |
| AATAAAATAGCAACATTCGC+CGG | + | chr2.4:5284023-5284042 | None:intergenic | 30.0% | |
| ACAGTAACAAATAAGAGAGA+AGG | - | chr2.4:5279019-5279038 | MS.gene85604:intron | 30.0% | |
| ACTGTAAATCGATCTAAATC+GGG | + | chr2.4:5281803-5281822 | None:intergenic | 30.0% | |
| AGACCACAAATCTATCATAA+GGG | + | chr2.4:5283319-5283338 | None:intergenic | 30.0% | |
| ATCACAAGAATTGATACCTT+TGG | + | chr2.4:5284237-5284256 | None:intergenic | 30.0% | |
| ATCATAAGACTGTTTGTTCT+GGG | - | chr2.4:5281126-5281145 | MS.gene85604:CDS | 30.0% | |
| ATGATCAGAATGTAACATTC+TGG | + | chr2.4:5281111-5281130 | None:intergenic | 30.0% | |
| ATGATTACCCTTTAGTATAG+TGG | - | chr2.4:5279245-5279264 | MS.gene85604:intron | 30.0% | |
| ATGATTCTTGTATGCAATAC+AGG | - | chr2.4:5280689-5280708 | MS.gene85604:intron | 30.0% | |
| ATGGTTGTGGTATAACTATA+CGG | - | chr2.4:5282124-5282143 | MS.gene85604:intron | 30.0% | |
| CAAACTGAATGGATGAAAAA+AGG | + | chr2.4:5280969-5280988 | None:intergenic | 30.0% | |
| CAAACTTTCATAGCTTCAAA+GGG | - | chr2.4:5282916-5282935 | MS.gene85604:intron | 30.0% | |
| CATGATAAATAAGATCGTGT+AGG | + | chr2.4:5281197-5281216 | None:intergenic | 30.0% | |
| CTTAATCAGAAAGAGAACAA+TGG | - | chr2.4:5282105-5282124 | MS.gene85604:intron | 30.0% | |
| CTTTGGATTGCTATAACAAA+AGG | + | chr2.4:5278816-5278835 | None:intergenic | 30.0% | |
| GAAAAGAGAAAAAACTGACA+CGG | + | chr2.4:5280454-5280473 | None:intergenic | 30.0% | |
| GAAACGGAAAAAGAAATTTG+TGG | + | chr2.4:5283545-5283564 | None:intergenic | 30.0% | |
| GATAGAGATACACTATAAGT+TGG | + | chr2.4:5284402-5284421 | None:intergenic | 30.0% | |
| GATATAATCTTCTGGTGAAA+CGG | + | chr2.4:5283561-5283580 | None:intergenic | 30.0% | |
| GCTTGCTTAATTTATATGGA+TGG | - | chr2.4:5279451-5279470 | MS.gene85604:intron | 30.0% | |
| TAAGAGTAAAAGATTGACAG+AGG | - | chr2.4:5283871-5283890 | MS.gene85604:intron | 30.0% | |
| TAATCAAAACCTCTACTAGT+AGG | + | chr2.4:5282531-5282550 | None:intergenic | 30.0% | |
| TAGGAACGTGAAACATTAAT+TGG | - | chr2.4:5279603-5279622 | MS.gene85604:CDS | 30.0% | |
| TATAGTGTATCTCTATCAGA+TGG | - | chr2.4:5284405-5284424 | MS.gene85604:intron | 30.0% | |
| TCACATGGTCGATATATAAA+TGG | + | chr2.4:5283689-5283708 | None:intergenic | 30.0% | |
| TCTGCATTCTTCTATCTATA+AGG | - | chr2.4:5283287-5283306 | MS.gene85604:CDS | 30.0% | |
| TGTATCTTCAGAAACTTGAT+CGG | + | chr2.4:5280207-5280226 | None:intergenic | 30.0% | |
| TGTTATATTGTTCCTCATCA+TGG | + | chr2.4:5279121-5279140 | None:intergenic | 30.0% | |
| TTAGAAAGATTGAGAGATCA+AGG | + | chr2.4:5279183-5279202 | None:intergenic | 30.0% | |
| TTATATGTTGAATATGCACC+CGG | - | chr2.4:5282433-5282452 | MS.gene85604:intron | 30.0% | |
| TTCACTTACCTGTAAAGTAT+TGG | + | chr2.4:5282238-5282257 | None:intergenic | 30.0% | |
| ! | AAAAATCAGCCCTCTAATTT+TGG | - | chr2.4:5284694-5284713 | MS.gene85604:CDS | 30.0% |
| ! | AATCCAGTCTGAGATTATTT+CGG | + | chr2.4:5281743-5281762 | None:intergenic | 30.0% |
| ! | AGAAAATGTTTTGCCACATA+TGG | - | chr2.4:5279668-5279687 | MS.gene85604:intron | 30.0% |
| ! | AGAGAAGTATACAGCATAAT+TGG | + | chr2.4:5280489-5280508 | None:intergenic | 30.0% |
| ! | ATCATTTTCAAAAGTGGTAC+CGG | + | chr2.4:5282839-5282858 | None:intergenic | 30.0% |
| ! | CAAGTTTCTGAAGATACAAA+TGG | - | chr2.4:5280209-5280228 | MS.gene85604:intron | 30.0% |
| ! | CTACACGATCTTATTTATCA+TGG | - | chr2.4:5281195-5281214 | MS.gene85604:CDS | 30.0% |
| ! | GATGATGAATTTTTGCTAGT+TGG | - | chr2.4:5280296-5280315 | MS.gene85604:intron | 30.0% |
| ! | GCTTTTGATAAAATTTGTGC+CGG | - | chr2.4:5282817-5282836 | MS.gene85604:intron | 30.0% |
| ! | TATTTGTTACTGTTGGTTAG+TGG | + | chr2.4:5279012-5279031 | None:intergenic | 30.0% |
| ! | TCTCTCTTATTTGTTACTGT+TGG | + | chr2.4:5279019-5279038 | None:intergenic | 30.0% |
| ! | TCTGAGATTATTTCGGAATA+AGG | + | chr2.4:5281736-5281755 | None:intergenic | 30.0% |
| ! | TGACAAGCTTTTCAAAAGAT+AGG | - | chr2.4:5280932-5280951 | MS.gene85604:intron | 30.0% |
| ! | TTTGTGTTTTCTTGTCAAAC+AGG | - | chr2.4:5283728-5283747 | MS.gene85604:intron | 30.0% |
| ! | TTTTGCCACACTTCTAAATT+TGG | + | chr2.4:5284677-5284696 | None:intergenic | 30.0% |
| !! | AAGGATTGCAACTTTTGAAA+TGG | + | chr2.4:5280093-5280112 | None:intergenic | 30.0% |
| !! | AATTGGTATGGTTTTGCAAT+TGG | - | chr2.4:5280871-5280890 | MS.gene85604:intron | 30.0% |
| !! | ACGGAGTTTGTTAATATTGA+AGG | + | chr2.4:5281597-5281616 | None:intergenic | 30.0% |
| !! | TTGGTTAGTGGTTTATTTTC+TGG | + | chr2.4:5279000-5279019 | None:intergenic | 30.0% |
| !! | TTGTTCTGCACTTTTTAATG+AGG | - | chr2.4:5279741-5279760 | MS.gene85604:intron | 30.0% |
| !! | TTTATCTTTTGATAGCTTCC+GGG | - | chr2.4:5281642-5281661 | MS.gene85604:CDS | 30.0% |
| !!! | AGGATTGCAACTTTTGAAAT+GGG | + | chr2.4:5280092-5280111 | None:intergenic | 30.0% |
| !!! | AGTGGTTTATTTTCTGGTTT+TGG | + | chr2.4:5278994-5279013 | None:intergenic | 30.0% |
| !!! | CTAGAACTCTTTTTGAGTAA+AGG | + | chr2.4:5281670-5281689 | None:intergenic | 30.0% |
| !!! | GTTTATTTTCTGGTTTTGGT+TGG | + | chr2.4:5278990-5279009 | None:intergenic | 30.0% |
| AAAAAAGGCAACGTAGAAGT+AGG | + | chr2.4:5282630-5282649 | None:intergenic | 35.0% | |
| AAAAAGGCAACGTAGAAGTA+GGG | + | chr2.4:5282629-5282648 | None:intergenic | 35.0% | |
| AAAATTCAGAGATGGTTAGC+TGG | - | chr2.4:5283214-5283233 | MS.gene85604:CDS | 35.0% | |
| AAATTAAGCAAGCATGTTGC+TGG | + | chr2.4:5279444-5279463 | None:intergenic | 35.0% | |
| AACTGCCTAACTGAATTAAC+TGG | + | chr2.4:5281481-5281500 | None:intergenic | 35.0% | |
| AAGTAAACTCCTACTAGTAG+AGG | - | chr2.4:5282519-5282538 | MS.gene85604:CDS | 35.0% | |
| AATAAAGAACATGTCTTGCC+TGG | + | chr2.4:5283922-5283941 | None:intergenic | 35.0% | |
| AATGTAACATTCTGGCGAAT+AGG | + | chr2.4:5281103-5281122 | None:intergenic | 35.0% | |
| AATTAAGCAAGCATGTTGCT+GGG | + | chr2.4:5279443-5279462 | None:intergenic | 35.0% | |
| ACAAGGGATATAATCTAGTG+TGG | - | chr2.4:5281520-5281539 | MS.gene85604:intron | 35.0% | |
| ACCAGAAGATTATATCTGCA+TGG | - | chr2.4:5283565-5283584 | MS.gene85604:intron | 35.0% | |
| ACCATGCAGATATAATCTTC+TGG | + | chr2.4:5283569-5283588 | None:intergenic | 35.0% | |
| ACTTTCTGCTGTTGAGATAT+TGG | + | chr2.4:5278759-5278778 | None:intergenic | 35.0% | |
| AGAATCACGTGTAAGTAGTA+AGG | - | chr2.4:5282032-5282051 | MS.gene85604:intron | 35.0% | |
| AGTAGAAGAAGGATGATTAC+CGG | + | chr2.4:5280345-5280364 | None:intergenic | 35.0% | |
| AGTTGCCAGTTAATTCAGTT+AGG | - | chr2.4:5281473-5281492 | MS.gene85604:intron | 35.0% | |
| AGTTGGTTATTCTGCTGTAA+AGG | - | chr2.4:5280313-5280332 | MS.gene85604:intron | 35.0% | |
| ATACAAGTCCAATGATCAAG+AGG | - | chr2.4:5284104-5284123 | MS.gene85604:intron | 35.0% | |
| ATGGTAAGACTACCTAACTA+AGG | - | chr2.4:5284424-5284443 | MS.gene85604:intron | 35.0% | |
| ATGTTATGGAGAAGCAAACA+CGG | + | chr2.4:5281616-5281635 | None:intergenic | 35.0% | |
| ATTAAAGTGGTCTTCGAAGT+AGG | - | chr2.4:5279584-5279603 | MS.gene85604:CDS | 35.0% | |
| ATTCCGAAATAATCTCAGAC+TGG | - | chr2.4:5281737-5281756 | MS.gene85604:intron | 35.0% | |
| CAAGCTACTGTAAGAGTTAA+AGG | - | chr2.4:5284568-5284587 | MS.gene85604:intron | 35.0% | |
| CAGACCACAAATCTATCATA+AGG | + | chr2.4:5283320-5283339 | None:intergenic | 35.0% | |
| CATCCTTATCTTACAGAAAG+AGG | + | chr2.4:5281916-5281935 | None:intergenic | 35.0% | |
| CATGGTTAAGAAATCAAGGA+AGG | - | chr2.4:5283807-5283826 | MS.gene85604:intron | 35.0% | |
| CCAAACTTTCATAGCTTCAA+AGG | - | chr2.4:5282915-5282934 | MS.gene85604:intron | 35.0% | |
| CTAAATCGGGAATCAGAAAA+GGG | + | chr2.4:5281790-5281809 | None:intergenic | 35.0% | |
| CTTATGATAGATTTGTGGTC+TGG | - | chr2.4:5283318-5283337 | MS.gene85604:CDS | 35.0% | |
| GAACAACTTCAGTGTATCTT+AGG | + | chr2.4:5279540-5279559 | None:intergenic | 35.0% | |
| GAACCTCTTTCTGTAAGATA+AGG | - | chr2.4:5281910-5281929 | MS.gene85604:intron | 35.0% | |
| GAATCACGTGTAAGTAGTAA+GGG | - | chr2.4:5282033-5282052 | MS.gene85604:intron | 35.0% | |
| GACCACAAATCTATCATAAG+GGG | + | chr2.4:5283318-5283337 | None:intergenic | 35.0% | |
| GATCATAAGACTGTTTGTTC+TGG | - | chr2.4:5281125-5281144 | MS.gene85604:CDS | 35.0% | |
| GATCTTCTCAAGATTTGTGT+TGG | + | chr2.4:5282896-5282915 | None:intergenic | 35.0% | |
| GCTAGAATTTGTGGCATTTA+AGG | - | chr2.4:5279875-5279894 | MS.gene85604:intron | 35.0% | |
| GGAAAGTTACACTGTGTATT+CGG | - | chr2.4:5280739-5280758 | MS.gene85604:intron | 35.0% | |
| GGCAAAATTTCAGTAGAAGA+AGG | + | chr2.4:5280356-5280375 | None:intergenic | 35.0% | |
| GGTACATGGTTAAGAAATCA+AGG | - | chr2.4:5283803-5283822 | MS.gene85604:intron | 35.0% | |
| GTAGTTAAAATCACAGGTCA+GGG | - | chr2.4:5280419-5280438 | MS.gene85604:CDS | 35.0% | |
| GTCTTGTACATTCATTTGAG+TGG | + | chr2.4:5282293-5282312 | None:intergenic | 35.0% | |
| GTTGACCAAATTTAGAAGTG+TGG | - | chr2.4:5284669-5284688 | MS.gene85604:CDS | 35.0% | |
| GTTGGAACTATTTGCATTCA+GGG | + | chr2.4:5282878-5282897 | None:intergenic | 35.0% | |
| TAATCTCAGACTGGATTTCT+AGG | - | chr2.4:5281746-5281765 | MS.gene85604:intron | 35.0% | |
| TAATTCAGTTAGGCAGTTAC+AGG | - | chr2.4:5281483-5281502 | MS.gene85604:intron | 35.0% | |
| TACTGTAAGAGTTAAAGGAG+TGG | - | chr2.4:5284573-5284592 | MS.gene85604:intron | 35.0% | |
| TCAATGCTCTTATACGAAAG+AGG | - | chr2.4:5282962-5282981 | MS.gene85604:intron | 35.0% | |
| TCAATTCAGTTACATGAAGG+AGG | - | chr2.4:5281373-5281392 | MS.gene85604:CDS | 35.0% | |
| TCCACTTGATAAGTTGCTTA+TGG | + | chr2.4:5284195-5284214 | None:intergenic | 35.0% | |
| TCCATTATAGAAGGCTGTAA+CGG | - | chr2.4:5283782-5283801 | MS.gene85604:intron | 35.0% | |
| TCTAAATCGGGAATCAGAAA+AGG | + | chr2.4:5281791-5281810 | None:intergenic | 35.0% | |
| TCTACTAGTAGGAGTTTACT+TGG | + | chr2.4:5282520-5282539 | None:intergenic | 35.0% | |
| TGAACAGTGTTCTTCATATC+AGG | - | chr2.4:5279800-5279819 | MS.gene85604:intron | 35.0% | |
| TGTAGTTAAAATCACAGGTC+AGG | - | chr2.4:5280418-5280437 | MS.gene85604:CDS | 35.0% | |
| TGTTGGAACTATTTGCATTC+AGG | + | chr2.4:5282879-5282898 | None:intergenic | 35.0% | |
| TTCATCTACATTGCCATATG+TGG | + | chr2.4:5279684-5279703 | None:intergenic | 35.0% | |
| TTCCCCTTATGATAGATTTG+TGG | - | chr2.4:5283313-5283332 | MS.gene85604:CDS | 35.0% | |
| TTGTACAAGCAACCTTAGTT+AGG | + | chr2.4:5284439-5284458 | None:intergenic | 35.0% | |
| ! | AAAAAGAAAGCACATCACTG+AGG | - | chr2.4:5282774-5282793 | MS.gene85604:intron | 35.0% |
| ! | AAAAAGTGCAGAACAAGACT+CGG | + | chr2.4:5279737-5279756 | None:intergenic | 35.0% |
| ! | AAAAGAAAGCACATCACTGA+GGG | - | chr2.4:5282775-5282794 | MS.gene85604:intron | 35.0% |
| ! | ATTCTGTCACTTCATGCTTT+GGG | + | chr2.4:5282017-5282036 | None:intergenic | 35.0% |
| ! | ATTGATCTTGATAACAAGCC+AGG | - | chr2.4:5282063-5282082 | MS.gene85604:intron | 35.0% |
| ! | CAAAACATTTTCTCGAGACA+AGG | + | chr2.4:5279661-5279680 | None:intergenic | 35.0% |
| ! | CGATCTTATTTATCATGGAG+TGG | - | chr2.4:5281200-5281219 | MS.gene85604:CDS | 35.0% |
| ! | CGTTCTTATGTTAACGGTTT+TGG | + | chr2.4:5278956-5278975 | None:intergenic | 35.0% |
| ! | CTTTTACTCTTAACAGATGG+AGG | + | chr2.4:5283863-5283882 | None:intergenic | 35.0% |
| ! | GCTGGTATGTTTTCCTTTAT+TGG | - | chr2.4:5283232-5283251 | MS.gene85604:CDS | 35.0% |
| ! | TAGTTTGCAAGATTCAAAGC+TGG | - | chr2.4:5281978-5281997 | MS.gene85604:intron | 35.0% |
| ! | TCAAAAAGAGTTCTAGCAGT+TGG | - | chr2.4:5281674-5281693 | MS.gene85604:CDS | 35.0% |
| !! | CCTTTGAAGCTATGAAAGTT+TGG | + | chr2.4:5282918-5282937 | None:intergenic | 35.0% |
| !! | GAGATACACTATAAGTTGGT+AGG | + | chr2.4:5284398-5284417 | None:intergenic | 35.0% |
| !! | TCTCAAAGCAGCTTTAGATT+CGG | + | chr2.4:5283485-5283504 | None:intergenic | 35.0% |
| !! | TTATCTTTTGATAGCTTCCG+GGG | - | chr2.4:5281643-5281662 | MS.gene85604:CDS | 35.0% |
| !!! | ATTTTCTGGTTTTGGTTGGT+TGG | + | chr2.4:5278986-5279005 | None:intergenic | 35.0% |
| !!! | GACTTTTGCAAGTTGATTGT+GGG | - | chr2.4:5279897-5279916 | MS.gene85604:intron | 35.0% |
| !!! | GGCGAATGTTGCTATTTTAT+TGG | - | chr2.4:5284022-5284041 | MS.gene85604:intron | 35.0% |
| AAAAGGCAACGTAGAAGTAG+GGG | + | chr2.4:5282628-5282647 | None:intergenic | 40.0% | |
| AACTGAAGTCAGAAGAAGGA+AGG | + | chr2.4:5282363-5282382 | None:intergenic | 40.0% | |
| AAGGGAAAACTCTATGGCAT+GGG | + | chr2.4:5279146-5279165 | None:intergenic | 40.0% | |
| ACAGCAGAAAGTTGCAAAAC+AGG | - | chr2.4:5278767-5278786 | MS.gene85604:CDS | 40.0% | |
| ACCGTTACAGCCTTCTATAA+TGG | + | chr2.4:5283786-5283805 | None:intergenic | 40.0% | |
| AGCACAAGAGCCAAAATTAG+AGG | + | chr2.4:5284707-5284726 | None:intergenic | 40.0% | |
| AGCCTTACAGATCTACTACA+GGG | - | chr2.4:5279073-5279092 | MS.gene85604:intron | 40.0% | |
| AGGGAATGCCACTATACTAA+AGG | + | chr2.4:5279256-5279275 | None:intergenic | 40.0% | |
| AGGTTGTTAGGGAAGTTACA+AGG | - | chr2.4:5281503-5281522 | MS.gene85604:intron | 40.0% | |
| ATGACCTAGGCGTTAATCTT+TGG | + | chr2.4:5278833-5278852 | None:intergenic | 40.0% | |
| ATGTTCCAGATATAGAGGGA+TGG | - | chr2.4:5280066-5280085 | MS.gene85604:intron | 40.0% | |
| ATTCAGTTACATGAAGGAGG+TGG | - | chr2.4:5281376-5281395 | MS.gene85604:CDS | 40.0% | |
| CAACTTATCAAGTGGAGTTG+TGG | - | chr2.4:5284199-5284218 | MS.gene85604:intron | 40.0% | |
| CAATCCAAAGATTAACGCCT+AGG | - | chr2.4:5278826-5278845 | MS.gene85604:intron | 40.0% | |
| CAGAAAGAGAACAATGGTTG+TGG | - | chr2.4:5282111-5282130 | MS.gene85604:intron | 40.0% | |
| CATCAACTGAAGTCAGAAGA+AGG | + | chr2.4:5282367-5282386 | None:intergenic | 40.0% | |
| GATAGCACCTAGAATTTACG+TGG | - | chr2.4:5279047-5279066 | MS.gene85604:intron | 40.0% | |
| GATGAACTTCAAACCTTGCT+AGG | + | chr2.4:5282315-5282334 | None:intergenic | 40.0% | |
| GATTTGTGGTCTGGCATAAA+TGG | - | chr2.4:5283327-5283346 | MS.gene85604:CDS | 40.0% | |
| GCACAAGAGCCAAAATTAGA+GGG | + | chr2.4:5284706-5284725 | None:intergenic | 40.0% | |
| GCATAGTGCCAATACTTTAC+AGG | - | chr2.4:5282227-5282246 | MS.gene85604:intron | 40.0% | |
| GCCATAAGCAACTTATCAAG+TGG | - | chr2.4:5284191-5284210 | MS.gene85604:intron | 40.0% | |
| GCTCTTATACGAAAGAGGAA+TGG | - | chr2.4:5282967-5282986 | MS.gene85604:intron | 40.0% | |
| GGGAATGCCACTATACTAAA+GGG | + | chr2.4:5279255-5279274 | None:intergenic | 40.0% | |
| GGTTGTTAGGGAAGTTACAA+GGG | - | chr2.4:5281504-5281523 | MS.gene85604:intron | 40.0% | |
| TAGGCAGTTACAGGTTGTTA+GGG | - | chr2.4:5281492-5281511 | MS.gene85604:intron | 40.0% | |
| TATACGAAAGAGGAATGGAC+TGG | - | chr2.4:5282972-5282991 | MS.gene85604:intron | 40.0% | |
| TATACGGTGTGATTCTGTCA+AGG | - | chr2.4:5282140-5282159 | MS.gene85604:intron | 40.0% | |
| TGAATGTACAAGACCTAGCA+AGG | - | chr2.4:5282299-5282318 | MS.gene85604:intron | 40.0% | |
| TGATTCTGTCAAGGAAGACT+GGG | - | chr2.4:5282149-5282168 | MS.gene85604:intron | 40.0% | |
| TTAGGCAGTTACAGGTTGTT+AGG | - | chr2.4:5281491-5281510 | MS.gene85604:intron | 40.0% | |
| TTCAGTTACATGAAGGAGGT+GGG | - | chr2.4:5281377-5281396 | MS.gene85604:CDS | 40.0% | |
| TTCCCTGTAGTAGATCTGTA+AGG | + | chr2.4:5279078-5279097 | None:intergenic | 40.0% | |
| TTCTGCTGTTGAGATATTGG+AGG | + | chr2.4:5278756-5278775 | None:intergenic | 40.0% | |
| TTGATCTTGCAGGAACTAGA+TGG | - | chr2.4:5284348-5284367 | MS.gene85604:intron | 40.0% | |
| TTTGACCTGCTTCACTTAAG+AGG | - | chr2.4:5279330-5279349 | MS.gene85604:intron | 40.0% | |
| ! | ATTCTCTGCTTGGAGTGTTA+TGG | - | chr2.4:5278897-5278916 | MS.gene85604:intron | 40.0% |
| ! | CCTTCTTACTGTCGACTAAA+AGG | + | chr2.4:5280112-5280131 | None:intergenic | 40.0% |
| ! | CCTTTTAGTCGACAGTAAGA+AGG | - | chr2.4:5280109-5280128 | MS.gene85604:intron | 40.0% |
| ! | CTAGAAGAGTACAGCAATGT+AGG | - | chr2.4:5284055-5284074 | MS.gene85604:intron | 40.0% |
| ! | GATTCTGTCACTTCATGCTT+TGG | + | chr2.4:5282018-5282037 | None:intergenic | 40.0% |
| ! | GCTACTTTAGTATCACTTCC+TGG | + | chr2.4:5282084-5282103 | None:intergenic | 40.0% |
| ! | GTTTTTGTTCCACCACTGAT+GGG | - | chr2.4:5280147-5280166 | MS.gene85604:CDS | 40.0% |
| ! | TTTTTGTTCCACCACTGATG+GGG | - | chr2.4:5280148-5280167 | MS.gene85604:CDS | 40.0% |
| !! | AATGCCACAAATTCTAGCTC+TGG | + | chr2.4:5279873-5279892 | None:intergenic | 40.0% |
| !! | AGAGATCAAGGTATTGCAAG+GGG | + | chr2.4:5279171-5279190 | None:intergenic | 40.0% |
| !! | GAGAGATCAAGGTATTGCAA+GGG | + | chr2.4:5279172-5279191 | None:intergenic | 40.0% |
| !! | TGAGAGATCAAGGTATTGCA+AGG | + | chr2.4:5279173-5279192 | None:intergenic | 40.0% |
| !!! | ACGGTTTTGGTTGTTCTCAT+TGG | + | chr2.4:5278943-5278962 | None:intergenic | 40.0% |
| !!! | GGACTTTTGCAAGTTGATTG+TGG | - | chr2.4:5279896-5279915 | MS.gene85604:intron | 40.0% |
| !!! | TCTTTTTGAGTAAAGGACCC+CGG | + | chr2.4:5281663-5281682 | None:intergenic | 40.0% |
| AGGTCAAATCTAGTGAGGCA+GGG | + | chr2.4:5279318-5279337 | None:intergenic | 45.0% | |
| ATCTGATGTGTGTCCTACTG+TGG | - | chr2.4:5278659-5278678 | MS.gene85604:CDS | 45.0% | |
| CAACGAGGTCAGTTTGATCA+GGG | + | chr2.4:5279965-5279984 | None:intergenic | 45.0% | |
| CAAGGGAAAACTCTATGGCA+TGG | + | chr2.4:5279147-5279166 | None:intergenic | 45.0% | |
| CAGCCTTACAGATCTACTAC+AGG | - | chr2.4:5279072-5279091 | MS.gene85604:intron | 45.0% | |
| CCAGAATTGCATGCTGCTAA+TGG | + | chr2.4:5284466-5284485 | None:intergenic | 45.0% | |
| CCATTAGCAGCATGCAATTC+TGG | - | chr2.4:5284463-5284482 | MS.gene85604:intron | 45.0% | |
| CTAATCCAGCTACACGACAT+TGG | - | chr2.4:5282726-5282745 | MS.gene85604:intron | 45.0% | |
| GAAGCAGGTCAAATCTAGTG+AGG | + | chr2.4:5279323-5279342 | None:intergenic | 45.0% | |
| GACTTTGAGTATTCGTGCGA+GGG | - | chr2.4:5284595-5284614 | MS.gene85604:CDS | 45.0% | |
| GCATCCAGAGCTAGAATTTG+TGG | - | chr2.4:5279866-5279885 | MS.gene85604:intron | 45.0% | |
| GTCAGTGATCGAAAAAGACG+TGG | - | chr2.4:5280175-5280194 | MS.gene85604:CDS | 45.0% | |
| GTGATTCTGTCAAGGAAGAC+TGG | - | chr2.4:5282148-5282167 | MS.gene85604:intron | 45.0% | |
| TACCTCCTCTTAAGTGAAGC+AGG | + | chr2.4:5279338-5279357 | None:intergenic | 45.0% | |
| TAGAAGGCTGTAACGGTACA+TGG | - | chr2.4:5283789-5283808 | MS.gene85604:intron | 45.0% | |
| TATCAAGTGGAGTTGTGGTG+TGG | - | chr2.4:5284204-5284223 | MS.gene85604:intron | 45.0% | |
| TCAAACTGACCTCGTTGATG+TGG | - | chr2.4:5279968-5279987 | MS.gene85604:intron | 45.0% | |
| TCAACGAGGTCAGTTTGATC+AGG | + | chr2.4:5279966-5279985 | None:intergenic | 45.0% | |
| TCCTACTGTGGATGCAGTTA+GGG | - | chr2.4:5278671-5278690 | MS.gene85604:CDS | 45.0% | |
| TCGGGAATCAGAAAAGGGAA+AGG | + | chr2.4:5281785-5281804 | None:intergenic | 45.0% | |
| TCTGCTGTAAAGGAAGCTAC+CGG | - | chr2.4:5280323-5280342 | MS.gene85604:intron | 45.0% | |
| TGCTTCACTTAAGAGGAGGT+AGG | - | chr2.4:5279337-5279356 | MS.gene85604:intron | 45.0% | |
| TGGTCTGGCATAAATGGTAC+TGG | - | chr2.4:5283333-5283352 | MS.gene85604:CDS | 45.0% | |
| TGTCAAGGAAGACTGGGATA+TGG | - | chr2.4:5282155-5282174 | MS.gene85604:intron | 45.0% | |
| TTGAAACAACCTTCTCAGCC+TGG | + | chr2.4:5282756-5282775 | None:intergenic | 45.0% | |
| TTTCTTGCCCTCTCTCTTGA+AGG | - | chr2.4:5282597-5282616 | MS.gene85604:CDS | 45.0% | |
| ! | AATTTGGAGTGACAGCGAGA+TGG | + | chr2.4:5283399-5283418 | None:intergenic | 45.0% |
| ! | ACTTGACTTTTCGGCGACAA+GGG | + | chr2.4:5281001-5281020 | None:intergenic | 45.0% |
| ! | ATTTGGAGTGACAGCGAGAT+GGG | + | chr2.4:5283398-5283417 | None:intergenic | 45.0% |
| ! | CATGCCATAGAGTTTTCCCT+TGG | - | chr2.4:5279145-5279164 | MS.gene85604:intron | 45.0% |
| ! | CGTTTTTGTTCCACCACTGA+TGG | - | chr2.4:5280146-5280165 | MS.gene85604:CDS | 45.0% |
| ! | CTCAGACTGGATTTCTAGGT+TGG | - | chr2.4:5281750-5281769 | MS.gene85604:intron | 45.0% |
| ! | GAGATATTGGAGGTGCATCA+CGG | + | chr2.4:5278746-5278765 | None:intergenic | 45.0% |
| ! | GTTTTCTTGTCAAACAGGCG+AGG | - | chr2.4:5283733-5283752 | MS.gene85604:intron | 45.0% |
| ! | TACTTGACTTTTCGGCGACA+AGG | + | chr2.4:5281002-5281021 | None:intergenic | 45.0% |
| ! | TAGGGCATTCGTTGAACACT+TGG | - | chr2.4:5278689-5278708 | MS.gene85604:CDS | 45.0% |
| ! | TTTCGGAATAAGGAAGCACG+TGG | + | chr2.4:5281726-5281745 | None:intergenic | 45.0% |
| !! | GCAGCTTTAGATTCGGTTCA+AGG | + | chr2.4:5283478-5283497 | None:intergenic | 45.0% |
| AGAACATGTCTTGCCTGGCA+CGG | + | chr2.4:5283917-5283936 | None:intergenic | 50.0% | |
| ATCTCTTGCTTCGCGAGGAA+AGG | + | chr2.4:5284632-5284651 | None:intergenic | 50.0% | |
| ATGGGCCATCCCTCTATATC+TGG | + | chr2.4:5280074-5280093 | None:intergenic | 50.0% | |
| ATTGGATTGCCAGGCTGAGA+AGG | - | chr2.4:5282744-5282763 | MS.gene85604:intron | 50.0% | |
| CAGGTCAAATCTAGTGAGGC+AGG | + | chr2.4:5279319-5279338 | None:intergenic | 50.0% | |
| CCATCACGACTCGACAACAA+AGG | + | chr2.4:5282557-5282576 | None:intergenic | 50.0% | |
| CTACACGACATTGGATTGCC+AGG | - | chr2.4:5282735-5282754 | MS.gene85604:intron | 50.0% | |
| GACATGTGTCAGTCTGCTAG+AGG | + | chr2.4:5281428-5281447 | None:intergenic | 50.0% | |
| GACCTGCTTCACTTAAGAGG+AGG | - | chr2.4:5279333-5279352 | MS.gene85604:intron | 50.0% | |
| GCAATCCAATGTCGTGTAGC+TGG | + | chr2.4:5282734-5282753 | None:intergenic | 50.0% | |
| GGAACCTCCTTCAAGAGAGA+GGG | + | chr2.4:5282607-5282626 | None:intergenic | 50.0% | |
| GGAAGACTGGGATATGGATG+TGG | - | chr2.4:5282161-5282180 | MS.gene85604:intron | 50.0% | |
| GGACTTTGAGTATTCGTGCG+AGG | - | chr2.4:5284594-5284613 | MS.gene85604:CDS | 50.0% | |
| GGCTGAGCCACGTAAATTCT+AGG | + | chr2.4:5279057-5279076 | None:intergenic | 50.0% | |
| GTCAGCTTTCCCTAGATGAC+TGG | - | chr2.4:5281449-5281468 | MS.gene85604:intron | 50.0% | |
| GTCCTACTGTGGATGCAGTT+AGG | - | chr2.4:5278670-5278689 | MS.gene85604:CDS | 50.0% | |
| GTGGTGTGGAATGATGCCAA+AGG | - | chr2.4:5284218-5284237 | MS.gene85604:intron | 50.0% | |
| TCAGTCTGCTAGAGGCAGTT+AGG | + | chr2.4:5281420-5281439 | None:intergenic | 50.0% | |
| TGATCCAATGCTGCCAGCAA+AGG | - | chr2.4:5278713-5278732 | MS.gene85604:CDS | 50.0% | |
| TGGCAACTGCCAGTCATCTA+GGG | + | chr2.4:5281461-5281480 | None:intergenic | 50.0% | |
| ! | AGAAAGCACATCACTGAGGG+TGG | - | chr2.4:5282778-5282797 | MS.gene85604:intron | 50.0% |
| ! | CCTTTGTTGTCGAGTCGTGA+TGG | - | chr2.4:5282554-5282573 | MS.gene85604:CDS | 50.0% |
| !! | AAGGTATTGCAAGGGGCCAA+GGG | + | chr2.4:5279164-5279183 | None:intergenic | 50.0% |
| !! | GTGGAAGTACTCGACAACTG+AGG | + | chr2.4:5281707-5281726 | None:intergenic | 50.0% |
| !! | TTTGAGTGGTGTTGCACCGA+TGG | + | chr2.4:5282279-5282298 | None:intergenic | 50.0% |
| !!! | GCTCTGGATGCTGTTTTCTG+TGG | + | chr2.4:5279857-5279876 | None:intergenic | 50.0% |
| CACTGACCATACCCCATCAG+TGG | + | chr2.4:5280162-5280181 | None:intergenic | 55.0% | |
| CACTTTGCAAAGTCCGTGCC+AGG | - | chr2.4:5283901-5283920 | MS.gene85604:intron | 55.0% | |
| CTGACCTCGTTGATGTGGAG+CGG | - | chr2.4:5279973-5279992 | MS.gene85604:intron | 55.0% | |
| CTGGCAACTGCCAGTCATCT+AGG | + | chr2.4:5281462-5281481 | None:intergenic | 55.0% | |
| CTTGCCCTCTCTCTTGAAGG+AGG | - | chr2.4:5282600-5282619 | MS.gene85604:CDS | 55.0% | |
| GAAGCCTTTGCTGGCAGCAT+TGG | + | chr2.4:5278720-5278739 | None:intergenic | 55.0% | |
| GCCCTAACTGCATCCACAGT+AGG | + | chr2.4:5278675-5278694 | None:intergenic | 55.0% | |
| GCTCACAGTCGACAGCTGAT+GGG | - | chr2.4:5280804-5280823 | MS.gene85604:intron | 55.0% | |
| GCTGAATCTCTTGCTTCGCG+AGG | + | chr2.4:5284637-5284656 | None:intergenic | 55.0% | |
| GGGAACCTCCTTCAAGAGAG+AGG | + | chr2.4:5282608-5282627 | None:intergenic | 55.0% | |
| GGGGCCAAGGGAAAACTCTA+TGG | + | chr2.4:5279152-5279171 | None:intergenic | 55.0% | |
| GTTCCACCACTGATGGGGTA+TGG | - | chr2.4:5280153-5280172 | MS.gene85604:CDS | 55.0% | |
| TCACGGCTAGAAGCCTTTGC+TGG | + | chr2.4:5278729-5278748 | None:intergenic | 55.0% | |
| TGACCATACCCCATCAGTGG+TGG | + | chr2.4:5280159-5280178 | None:intergenic | 55.0% | |
| TGCTCACAGTCGACAGCTGA+TGG | - | chr2.4:5280803-5280822 | MS.gene85604:intron | 55.0% | |
| !! | CAAGGTATTGCAAGGGGCCA+AGG | + | chr2.4:5279165-5279184 | None:intergenic | 55.0% |
| GCGCGCGATAGAGGATGAGA+TGG | - | chr2.4:5283177-5283196 | MS.gene85604:CDS | 60.0% | |
| TCTTCAGCAGCGCGCGATAG+AGG | - | chr2.4:5283168-5283187 | MS.gene85604:CDS | 60.0% | |
| GCTGCCGCTCCACATCAACG+AGG | + | chr2.4:5279980-5279999 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 5278651 | 5284729 | 5278651 | ID=MS.gene85604 |
| chr2.4 | mRNA | 5278651 | 5284729 | 5278651 | ID=MS.gene85604.t1;Parent=MS.gene85604 |
| chr2.4 | exon | 5284592 | 5284729 | 5284592 | ID=MS.gene85604.t1.exon1;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5284592 | 5284729 | 5284592 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5283036 | 5283558 | 5283036 | ID=MS.gene85604.t1.exon2;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5283036 | 5283558 | 5283036 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5282519 | 5282669 | 5282519 | ID=MS.gene85604.t1.exon3;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5282519 | 5282669 | 5282519 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5281613 | 5281723 | 5281613 | ID=MS.gene85604.t1.exon4;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5281613 | 5281723 | 5281613 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5281060 | 5281417 | 5281060 | ID=MS.gene85604.t1.exon5;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5281060 | 5281417 | 5281060 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5280387 | 5280623 | 5280387 | ID=MS.gene85604.t1.exon6;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5280387 | 5280623 | 5280387 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5280145 | 5280214 | 5280145 | ID=MS.gene85604.t1.exon7;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5280145 | 5280214 | 5280145 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5279458 | 5279630 | 5279458 | ID=MS.gene85604.t1.exon8;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5279458 | 5279630 | 5279458 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5278954 | 5279020 | 5278954 | ID=MS.gene85604.t1.exon9;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5278954 | 5279020 | 5278954 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| chr2.4 | exon | 5278651 | 5278820 | 5278651 | ID=MS.gene85604.t1.exon10;Parent=MS.gene85604.t1 |
| chr2.4 | CDS | 5278651 | 5278820 | 5278651 | ID=cds.MS.gene85604.t1;Parent=MS.gene85604.t1 |
| Gene Sequence |
| Protein sequence |
