Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86036.t1 | XP_003618543.1 | 95.9 | 194 | 8 | 0 | 3 | 196 | 44 | 237 | 7.90E-107 | 396.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86036.t1 | G7KKZ0 | 95.9 | 194 | 8 | 0 | 3 | 196 | 44 | 237 | 5.7e-107 | 396.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene86036 | 0.801012 | 1.10E-48 | -1.69E-46 |
| MS.gene049283 | MS.gene86036 | 0.810477 | 1.13E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene86036 | 0.818655 | 1.75E-52 | -1.69E-46 |
| MS.gene049452 | MS.gene86036 | 0.806263 | 8.95E-50 | -1.69E-46 |
| MS.gene050073 | MS.gene86036 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene86036 | 0.823322 | 1.47E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene86036 | 0.820435 | 6.87E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene86036 | 0.807651 | 4.56E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene86036 | 0.802326 | 5.91E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene86036 | 0.821513 | 3.88E-53 | -1.69E-46 |
| MS.gene051597 | MS.gene86036 | 0.809341 | 1.99E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene86036 | 0.812283 | 4.58E-51 | -1.69E-46 |
| MS.gene052108 | MS.gene86036 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene86036 | 0.829682 | 4.49E-55 | -1.69E-46 |
| MS.gene052502 | MS.gene86036 | 0.824118 | 9.60E-54 | -1.69E-46 |
| MS.gene052826 | MS.gene86036 | 0.825086 | 5.68E-54 | -1.69E-46 |
| MS.gene052954 | MS.gene86036 | 0.823263 | 1.52E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene86036 | 0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene86036 | 0.845019 | 5.27E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene86036 | 0.816 | 6.93E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene86036 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene86036 | 0.805339 | 1.40E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene86036 | 0.840904 | 6.56E-58 | -1.69E-46 |
| MS.gene056366 | MS.gene86036 | 0.819417 | 1.17E-52 | -1.69E-46 |
| MS.gene056776 | MS.gene86036 | 0.800403 | 1.46E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene86036 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene86036 | 0.807809 | 4.22E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene86036 | 0.873513 | 1.39E-67 | -1.69E-46 |
| MS.gene057371 | MS.gene86036 | 0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene057392 | MS.gene86036 | 0.806928 | 6.48E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene86036 | 0.813364 | 2.66E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene86036 | 0.804027 | 2.63E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene86036 | 0.811889 | 5.59E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene86036 | 0.834806 | 2.42E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene86036 | 0.813932 | 1.99E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene86036 | 0.814299 | 1.65E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene86036 | 0.802926 | 4.45E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene86036 | 0.824984 | 6.00E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene86036 | 0.810506 | 1.11E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86036.t1 | MTR_6g012830 | 95.385 | 195 | 9 | 0 | 2 | 196 | 43 | 237 | 2.68e-141 | 393 |
| MS.gene86036.t1 | MTR_6g012830 | 95.062 | 162 | 8 | 0 | 2 | 163 | 43 | 204 | 2.51e-115 | 327 |
| MS.gene86036.t1 | MTR_6g012830 | 82.051 | 195 | 7 | 1 | 2 | 196 | 43 | 209 | 8.47e-114 | 323 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86036.t1 | AT5G39530 | 46.739 | 184 | 97 | 1 | 4 | 187 | 50 | 232 | 1.88e-59 | 186 |
| MS.gene86036.t1 | AT5G39520 | 42.246 | 187 | 106 | 2 | 7 | 193 | 45 | 229 | 2.68e-53 | 170 |
| MS.gene86036.t1 | AT5G39530 | 44.944 | 178 | 89 | 2 | 4 | 181 | 50 | 218 | 2.01e-52 | 167 |
Find 35 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTCTTTCCCTTCCTTTC+TGG | 0.048858 | 6.3:-8136204 | None:intergenic |
| ACCCCTGGTAACTCATAAAA+AGG | 0.262948 | 6.3:-8135106 | None:intergenic |
| CTTAACCTTACATCTACTTT+TGG | 0.275287 | 6.3:-8135819 | None:intergenic |
| GGCTTCCTTTGATCAATATA+TGG | 0.278362 | 6.3:+8135219 | MS.gene86036:intron |
| AAAGCAGTGTTTCCTGAAAA+AGG | 0.293804 | 6.3:+8135262 | MS.gene86036:CDS |
| TATACAATGCTTCATCTTGA+AGG | 0.378322 | 6.3:+8135791 | MS.gene86036:CDS |
| TGTATAAGGTATTGAGTCCT+TGG | 0.417418 | 6.3:-8136137 | None:intergenic |
| GACTTCAACTTAGATGTAAG+AGG | 0.434676 | 6.3:+8136171 | MS.gene86036:CDS |
| AACACTGCTTTGACTACTCT+TGG | 0.446906 | 6.3:-8135250 | None:intergenic |
| AGGTTAAGAATAAAGTCTAA+TGG | 0.464292 | 6.3:+8135834 | MS.gene86036:CDS |
| TTCAACCAAAAGTAGATGTA+AGG | 0.465816 | 6.3:+8135814 | MS.gene86036:CDS |
| GTCGTAAGGATCATTGTATA+AGG | 0.478912 | 6.3:-8136151 | None:intergenic |
| CAAATGAAGCAGGAATTTCA+TGG | 0.480806 | 6.3:+8136612 | MS.gene86036:CDS |
| AAAGGAAGGGAAAGAGTAGT+TGG | 0.497535 | 6.3:+8136208 | MS.gene86036:CDS |
| TTCAAGATGAAGCATTGTAT+AGG | 0.516620 | 6.3:-8135789 | None:intergenic |
| TATTATATATCCAGAAAGGA+AGG | 0.525308 | 6.3:+8136194 | MS.gene86036:CDS |
| TCAGGAACAAAAGTCATTGT+TGG | 0.526181 | 6.3:-8136273 | None:intergenic |
| GCATCTCGTAAGATATGCTC+AGG | 0.537298 | 6.3:-8136291 | None:intergenic |
| CTTACGAGATGCATTAGAGT+TGG | 0.542520 | 6.3:+8136302 | MS.gene86036:CDS |
| ACATCTAAGTTGAAGTCGTA+AGG | 0.548661 | 6.3:-8136165 | None:intergenic |
| TTATATGTATACAGGAGGAA+TGG | 0.554629 | 6.3:+8135751 | MS.gene86036:intron |
| GATGTGGAATCAAATGAAGC+AGG | 0.560904 | 6.3:+8136602 | MS.gene86036:CDS |
| AATGGACCACATGTTTAGAC+TGG | 0.571782 | 6.3:-8136687 | None:intergenic |
| AAGATGAAGCATTGTATAGG+AGG | 0.579892 | 6.3:-8135786 | None:intergenic |
| TAGTTGGCTCAAGAATCAAA+TGG | 0.580045 | 6.3:+8136224 | MS.gene86036:CDS |
| ATCATCCATATATTGATCAA+AGG | 0.580382 | 6.3:-8135224 | None:intergenic |
| GAGGTATTATATATCCAGAA+AGG | 0.582099 | 6.3:+8136190 | MS.gene86036:CDS |
| ATGTGATGAGGAATGTGAGG+TGG | 0.585549 | 6.3:-8135867 | None:intergenic |
| CAGACGAGGTGGGAGCTCCA+AGG | 0.602105 | 6.3:+8136120 | MS.gene86036:intron |
| ATTATATATCCAGAAAGGAA+GGG | 0.617916 | 6.3:+8136195 | MS.gene86036:CDS |
| TTAAATCCTATCAGACGAGG+TGG | 0.635432 | 6.3:+8136109 | MS.gene86036:intron |
| AACAGGTATTCAAAACGATG+TGG | 0.655966 | 6.3:+8136586 | MS.gene86036:intron |
| AAACTCTAAACAGCTCAATG+AGG | 0.660173 | 6.3:+8135285 | MS.gene86036:CDS |
| TAAATCCTATCAGACGAGGT+GGG | 0.681527 | 6.3:+8136110 | MS.gene86036:intron |
| CTAATGTGATGAGGAATGTG+AGG | 0.705321 | 6.3:-8135870 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCTTCAAAAAAAAAATA+TGG | + | chr6.3:8135541-8135560 | MS.gene86036:intron | 10.0% |
| !!! | AAAAATATGGTTTTAAATTA+TGG | + | chr6.3:8135554-8135573 | MS.gene86036:intron | 10.0% |
| !!! | TTAATTTTAAGGTAATATAA+AGG | - | chr6.3:8135592-8135611 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTCTTAATTTTA+AGG | - | chr6.3:8135603-8135622 | None:intergenic | 10.0% |
| !! | AAAATTTATGTTAGAATCAT+TGG | - | chr6.3:8135183-8135202 | None:intergenic | 15.0% |
| !! | AAATTAAGAAGAAAAAAATG+TGG | + | chr6.3:8135605-8135624 | MS.gene86036:intron | 15.0% |
| !! | ATATACAAATATAAGCTATT+TGG | - | chr6.3:8136514-8136533 | None:intergenic | 15.0% |
| !! | ATATTTCATCAATCATATTA+TGG | + | chr6.3:8134934-8134953 | MS.gene86036:intron | 15.0% |
| !!! | TATAATTTGTTGAAGTAATA+TGG | + | chr6.3:8135513-8135532 | MS.gene86036:intron | 15.0% |
| !!! | TATATGTTGATAAAATTAAC+AGG | + | chr6.3:8136569-8136588 | MS.gene86036:intron | 15.0% |
| !! | AACAATTTAGAAGAGAAAAT+TGG | - | chr6.3:8134766-8134785 | None:intergenic | 20.0% |
| !! | AACTTATCTAATTTGAACTA+AGG | + | chr6.3:8136385-8136404 | MS.gene86036:intron | 20.0% |
| !! | ACTATTGTTTATATGTATAC+AGG | + | chr6.3:8135743-8135762 | MS.gene86036:intron | 20.0% |
| !! | ACTTATCTAATTTGAACTAA+GGG | + | chr6.3:8136386-8136405 | MS.gene86036:intron | 20.0% |
| !!! | GATCATTCTTATTTCATTTT+CGG | + | chr6.3:8135978-8135997 | MS.gene86036:intron | 20.0% |
| !!! | TACTCATTAGCTTTAATTAA+GGG | - | chr6.3:8135714-8135733 | None:intergenic | 20.0% |
| !!! | TATAACAATTTTAGAGGTTT+CGG | - | chr6.3:8135654-8135673 | None:intergenic | 20.0% |
| ! | AAATTGTTATATTGCGATTG+CGG | + | chr6.3:8135663-8135682 | MS.gene86036:intron | 25.0% |
| ! | AGGTTAAGAATAAAGTCTAA+TGG | + | chr6.3:8135834-8135853 | MS.gene86036:CDS | 25.0% |
| ! | ATCATCCATATATTGATCAA+AGG | - | chr6.3:8135227-8135246 | None:intergenic | 25.0% |
| ! | ATTATATATCCAGAAAGGAA+GGG | + | chr6.3:8136195-8136214 | MS.gene86036:CDS | 25.0% |
| ! | ATTGTTTATATGTATACAGG+AGG | + | chr6.3:8135746-8135765 | MS.gene86036:intron | 25.0% |
| ! | CTAAAAGTGACACAATATAA+AGG | - | chr6.3:8135474-8135493 | None:intergenic | 25.0% |
| ! | TATTATATATCCAGAAAGGA+AGG | + | chr6.3:8136194-8136213 | MS.gene86036:CDS | 25.0% |
| ! | TCACGAATATAATTGATTGA+CGG | + | chr6.3:8136056-8136075 | MS.gene86036:intron | 25.0% |
| ! | TTTAATTAAGGGACACAATA+TGG | - | chr6.3:8135703-8135722 | None:intergenic | 25.0% |
| !! | AAAAGATGACATGTTTGTTA+CGG | - | chr6.3:8136486-8136505 | None:intergenic | 25.0% |
| !! | ATTTTTGTGATTTTCTTTGC+AGG | + | chr6.3:8135198-8135217 | MS.gene86036:intron | 25.0% |
| !! | CTTACTATATTAGACTTGTT+TGG | + | chr6.3:8136343-8136362 | MS.gene86036:intron | 25.0% |
| !! | TATTAGTACAAAAGAAGCAT+AGG | + | chr6.3:8134987-8135006 | MS.gene86036:intron | 25.0% |
| !! | TCGCAATATAACAATTTTAG+AGG | - | chr6.3:8135660-8135679 | None:intergenic | 25.0% |
| !! | TGCTTCTTTTGTACTAATAA+TGG | - | chr6.3:8134986-8135005 | None:intergenic | 25.0% |
| !! | TTATGTTAGAATCATTGGTT+TGG | - | chr6.3:8135178-8135197 | None:intergenic | 25.0% |
| !!! | ACACAATATAAAGGTTTTAG+AGG | - | chr6.3:8135465-8135484 | None:intergenic | 25.0% |
| !!! | GTACTCATTAGCTTTAATTA+AGG | - | chr6.3:8135715-8135734 | None:intergenic | 25.0% |
| AATACTTCTATAGCTGAATG+AGG | - | chr6.3:8135077-8135096 | None:intergenic | 30.0% | |
| ACAATAGTTTAATTCTCGTC+CGG | - | chr6.3:8136440-8136459 | None:intergenic | 30.0% | |
| AGAAAAAAATGTGGTCAATG+CGG | + | chr6.3:8135614-8135633 | MS.gene86036:intron | 30.0% | |
| CTAATTTGAACTAAGGGATA+AGG | + | chr6.3:8136392-8136411 | MS.gene86036:intron | 30.0% | |
| GAAGATGAAGATGGTAATTA+AGG | - | chr6.3:8135151-8135170 | None:intergenic | 30.0% | |
| TATACAATGCTTCATCTTGA+AGG | + | chr6.3:8135791-8135810 | MS.gene86036:CDS | 30.0% | |
| TATTATGGCAAGTATTAGTG+TGG | + | chr6.3:8134949-8134968 | MS.gene86036:intron | 30.0% | |
| TTACGTTGCAAACCTTTATT+TGG | + | chr6.3:8135385-8135404 | MS.gene86036:intron | 30.0% | |
| TTATATGTATACAGGAGGAA+TGG | + | chr6.3:8135751-8135770 | MS.gene86036:intron | 30.0% | |
| TTCAACCAAAAGTAGATGTA+AGG | + | chr6.3:8135814-8135833 | MS.gene86036:CDS | 30.0% | |
| ! | AAACTTTGATAATATACCCC+TGG | - | chr6.3:8135124-8135143 | None:intergenic | 30.0% |
| ! | AGAATTTTGCTAATGTGATG+AGG | - | chr6.3:8135882-8135901 | None:intergenic | 30.0% |
| ! | CATTTTGTAAGCACTTTCAT+TGG | + | chr6.3:8135909-8135928 | MS.gene86036:intron | 30.0% |
| ! | CTTAACCTTACATCTACTTT+TGG | - | chr6.3:8135822-8135841 | None:intergenic | 30.0% |
| ! | GAGGTATTATATATCCAGAA+AGG | + | chr6.3:8136190-8136209 | MS.gene86036:CDS | 30.0% |
| ! | TTCCTTTTTATGAGTTACCA+GGG | + | chr6.3:8135104-8135123 | MS.gene86036:CDS | 30.0% |
| !! | TGTTTAGAGTTTCCTTTTTC+AGG | - | chr6.3:8135277-8135296 | None:intergenic | 30.0% |
| !! | TTAGAATCATTGGTTTGGAT+TGG | - | chr6.3:8135173-8135192 | None:intergenic | 30.0% |
| !! | TTCAAGATGAAGCATTGTAT+AGG | - | chr6.3:8135792-8135811 | None:intergenic | 30.0% |
| !!! | CACTTTTAGAACTATGTGTA+TGG | + | chr6.3:8135485-8135504 | MS.gene86036:intron | 30.0% |
| AAACTCTAAACAGCTCAATG+AGG | + | chr6.3:8135285-8135304 | MS.gene86036:CDS | 35.0% | |
| AAAGCAGTGTTTCCTGAAAA+AGG | + | chr6.3:8135262-8135281 | MS.gene86036:CDS | 35.0% | |
| AACAGGTATTCAAAACGATG+TGG | + | chr6.3:8136586-8136605 | MS.gene86036:intron | 35.0% | |
| CAAATGAAGCAGGAATTTCA+TGG | + | chr6.3:8136612-8136631 | MS.gene86036:CDS | 35.0% | |
| CAATAGTTTAATTCTCGTCC+GGG | - | chr6.3:8136439-8136458 | None:intergenic | 35.0% | |
| CAATTAAATCCTATCAGACG+AGG | + | chr6.3:8136106-8136125 | MS.gene86036:intron | 35.0% | |
| CATCATGTTCATCAGTGATT+AGG | + | chr6.3:8135038-8135057 | MS.gene86036:intron | 35.0% | |
| GACTTCAACTTAGATGTAAG+AGG | + | chr6.3:8136171-8136190 | MS.gene86036:CDS | 35.0% | |
| GGCTTCCTTTGATCAATATA+TGG | + | chr6.3:8135219-8135238 | MS.gene86036:intron | 35.0% | |
| GTCGTAAGGATCATTGTATA+AGG | - | chr6.3:8136154-8136173 | None:intergenic | 35.0% | |
| TCAGGAACAAAAGTCATTGT+TGG | - | chr6.3:8136276-8136295 | None:intergenic | 35.0% | |
| TCGGATAATATGCATCGTTA+GGG | + | chr6.3:8135997-8136016 | MS.gene86036:intron | 35.0% | |
| TGTACTAATAATGGTTGCCA+AGG | - | chr6.3:8134977-8134996 | None:intergenic | 35.0% | |
| TTCGGATAATATGCATCGTT+AGG | + | chr6.3:8135996-8136015 | MS.gene86036:intron | 35.0% | |
| TTTCCTTCTCAACAAGACAA+AGG | - | chr6.3:8134892-8134911 | None:intergenic | 35.0% | |
| ! | ACATCTAAGTTGAAGTCGTA+AGG | - | chr6.3:8136168-8136187 | None:intergenic | 35.0% |
| ! | GTTCCTTTTTATGAGTTACC+AGG | + | chr6.3:8135103-8135122 | MS.gene86036:CDS | 35.0% |
| ! | TAGTTGGCTCAAGAATCAAA+TGG | + | chr6.3:8136224-8136243 | MS.gene86036:CDS | 35.0% |
| ! | TCCTTTTTATGAGTTACCAG+GGG | + | chr6.3:8135105-8135124 | MS.gene86036:CDS | 35.0% |
| ! | TTTGGATTGGAAGATGAAGA+TGG | - | chr6.3:8135160-8135179 | None:intergenic | 35.0% |
| !! | AAGATGAAGCATTGTATAGG+AGG | - | chr6.3:8135789-8135808 | None:intergenic | 35.0% |
| !! | TGTATAAGGTATTGAGTCCT+TGG | - | chr6.3:8136140-8136159 | None:intergenic | 35.0% |
| AAAGGAAGGGAAAGAGTAGT+TGG | + | chr6.3:8136208-8136227 | MS.gene86036:CDS | 40.0% | |
| AACACTGCTTTGACTACTCT+TGG | - | chr6.3:8135253-8135272 | None:intergenic | 40.0% | |
| ACCCCTGGTAACTCATAAAA+AGG | - | chr6.3:8135109-8135128 | None:intergenic | 40.0% | |
| ACTAAGGGATAAGGAGTTTG+AGG | + | chr6.3:8136401-8136420 | MS.gene86036:intron | 40.0% | |
| CAAGTATTAGTGTGGTTCCT+TGG | + | chr6.3:8134957-8134976 | MS.gene86036:intron | 40.0% | |
| CTAATGTGATGAGGAATGTG+AGG | - | chr6.3:8135873-8135892 | None:intergenic | 40.0% | |
| CTTACGAGATGCATTAGAGT+TGG | + | chr6.3:8136302-8136321 | MS.gene86036:CDS | 40.0% | |
| GATGTGGAATCAAATGAAGC+AGG | + | chr6.3:8136602-8136621 | MS.gene86036:CDS | 40.0% | |
| TAAATCCTATCAGACGAGGT+GGG | + | chr6.3:8136110-8136129 | MS.gene86036:intron | 40.0% | |
| TGCACATTACGGCCAAATAA+AGG | - | chr6.3:8135400-8135419 | None:intergenic | 40.0% | |
| TGTTATATTGCGATTGCGGA+CGG | + | chr6.3:8135667-8135686 | MS.gene86036:intron | 40.0% | |
| TTAAATCCTATCAGACGAGG+TGG | + | chr6.3:8136109-8136128 | MS.gene86036:intron | 40.0% | |
| ! | GTACCTTTGTCTTGTTGAGA+AGG | + | chr6.3:8134886-8134905 | MS.gene86036:intron | 40.0% |
| AACTGCAATCACGGACTCAT+CGG | - | chr6.3:8135424-8135443 | None:intergenic | 45.0% | |
| ATGTGATGAGGAATGTGAGG+TGG | - | chr6.3:8135870-8135889 | None:intergenic | 45.0% | |
| CTACTCTTTCCCTTCCTTTC+TGG | - | chr6.3:8136207-8136226 | None:intergenic | 45.0% | |
| GCATCTCGTAAGATATGCTC+AGG | - | chr6.3:8136294-8136313 | None:intergenic | 45.0% | |
| TGGCATCACAACTGCAATCA+CGG | - | chr6.3:8135433-8135452 | None:intergenic | 45.0% | |
| TTGCAGTTGTGATGCCATTG+TGG | + | chr6.3:8135436-8135455 | MS.gene86036:intron | 45.0% | |
| ! | GACTCATCGGTTGCACATTA+CGG | - | chr6.3:8135411-8135430 | None:intergenic | 45.0% |
| ! | TTGAGGTCTGGTTTCAAACC+CGG | + | chr6.3:8136418-8136437 | MS.gene86036:intron | 45.0% |
| !!! | GGTTTTAGAGGTCTCCACAA+TGG | - | chr6.3:8135453-8135472 | None:intergenic | 45.0% |
| ! | GGGATAAGGAGTTTGAGGTC+TGG | + | chr6.3:8136406-8136425 | MS.gene86036:intron | 50.0% |
| GAGCTCCCACCTCGTCTGAT+AGG | - | chr6.3:8136118-8136137 | None:intergenic | 60.0% | |
| CAGACGAGGTGGGAGCTCCA+AGG | + | chr6.3:8136120-8136139 | MS.gene86036:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 8134756 | 8136695 | 8134756 | ID=MS.gene86036 |
| chr6.3 | mRNA | 8134756 | 8136695 | 8134756 | ID=MS.gene86036.t1;Parent=MS.gene86036 |
| chr6.3 | exon | 8134756 | 8134760 | 8134756 | ID=MS.gene86036.t1.exon1;Parent=MS.gene86036.t1 |
| chr6.3 | CDS | 8134756 | 8134760 | 8134756 | ID=cds.MS.gene86036.t1;Parent=MS.gene86036.t1 |
| chr6.3 | exon | 8135084 | 8135126 | 8135084 | ID=MS.gene86036.t1.exon2;Parent=MS.gene86036.t1 |
| chr6.3 | CDS | 8135084 | 8135126 | 8135084 | ID=cds.MS.gene86036.t1;Parent=MS.gene86036.t1 |
| chr6.3 | exon | 8135220 | 8135306 | 8135220 | ID=MS.gene86036.t1.exon3;Parent=MS.gene86036.t1 |
| chr6.3 | CDS | 8135220 | 8135306 | 8135220 | ID=cds.MS.gene86036.t1;Parent=MS.gene86036.t1 |
| chr6.3 | exon | 8135765 | 8135914 | 8135765 | ID=MS.gene86036.t1.exon4;Parent=MS.gene86036.t1 |
| chr6.3 | CDS | 8135765 | 8135914 | 8135765 | ID=cds.MS.gene86036.t1;Parent=MS.gene86036.t1 |
| chr6.3 | exon | 8136123 | 8136323 | 8136123 | ID=MS.gene86036.t1.exon5;Parent=MS.gene86036.t1 |
| chr6.3 | CDS | 8136123 | 8136323 | 8136123 | ID=cds.MS.gene86036.t1;Parent=MS.gene86036.t1 |
| chr6.3 | exon | 8136591 | 8136695 | 8136591 | ID=MS.gene86036.t1.exon6;Parent=MS.gene86036.t1 |
| chr6.3 | CDS | 8136591 | 8136695 | 8136591 | ID=cds.MS.gene86036.t1;Parent=MS.gene86036.t1 |
| Gene Sequence |
| Protein sequence |
