Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89325.t1 | XP_013448955.1 | 90.6 | 266 | 25 | 0 | 1 | 266 | 1 | 266 | 1.10E-135 | 492.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89325.t1 | P50162 | 56.7 | 268 | 113 | 1 | 1 | 265 | 1 | 268 | 4.9e-84 | 312.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89325.t1 | A0A072U041 | 90.6 | 266 | 25 | 0 | 1 | 266 | 1 | 266 | 8.0e-136 | 492.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene89325 | 0.837095 | 6.36E-57 | -1.69E-46 |
| MS.gene049910 | MS.gene89325 | 0.8428 | 2.07E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene89325 | 0.824358 | 8.43E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene89325 | 0.829817 | 4.16E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene89325 | -0.805894 | 1.07E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene89325 | 0.80975 | 1.62E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene89325 | 0.803633 | 3.18E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene89325 | 0.823614 | 1.26E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene89325 | 0.803708 | 3.06E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene89325 | 0.830726 | 2.50E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene89325 | 0.867541 | 1.27E-65 | -1.69E-46 |
| MS.gene051860 | MS.gene89325 | 0.808951 | 2.41E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene89325 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene89325 | 0.818355 | 2.05E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene89325 | 0.829665 | 4.53E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene89325 | 0.849931 | 2.35E-60 | -1.69E-46 |
| MS.gene052481 | MS.gene89325 | 0.819817 | 9.51E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene89325 | 0.827192 | 1.79E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene89325 | 0.819046 | 1.43E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene89325 | 0.848715 | 5.14E-60 | -1.69E-46 |
| MS.gene054918 | MS.gene89325 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene89325 | 0.863743 | 2.00E-64 | -1.69E-46 |
| MS.gene055277 | MS.gene89325 | 0.806715 | 7.19E-50 | -1.69E-46 |
| MS.gene055428 | MS.gene89325 | 0.817229 | 3.68E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene89325 | 0.849481 | 3.15E-60 | -1.69E-46 |
| MS.gene055859 | MS.gene89325 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene056191 | MS.gene89325 | 0.826829 | 2.19E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene89325 | 0.834215 | 3.41E-56 | -1.69E-46 |
| MS.gene056451 | MS.gene89325 | 0.808416 | 3.13E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene89325 | 0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene89325 | 0.863973 | 1.70E-64 | -1.69E-46 |
| MS.gene057448 | MS.gene89325 | 0.809628 | 1.72E-50 | -1.69E-46 |
| MS.gene057449 | MS.gene89325 | 0.801001 | 1.11E-48 | -1.69E-46 |
| MS.gene057450 | MS.gene89325 | 0.806905 | 6.56E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene89325 | 0.839891 | 1.21E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene89325 | 0.825604 | 4.28E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene89325 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene89325 | 0.856554 | 2.97E-62 | -1.69E-46 |
| MS.gene059082 | MS.gene89325 | 0.809666 | 1.69E-50 | -1.69E-46 |
| MS.gene059141 | MS.gene89325 | 0.806869 | 6.67E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene89325 | 0.813489 | 2.49E-51 | -1.69E-46 |
| MS.gene059462 | MS.gene89325 | 0.820174 | 7.88E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene89325 | 0.834564 | 2.79E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene89325 | 0.824795 | 6.65E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene89325 | 0.827163 | 1.82E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene89325 | 0.805026 | 1.63E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene89325 | 0.816796 | 4.60E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene89325 | 0.873452 | 1.45E-67 | -1.69E-46 |
| MS.gene060986 | MS.gene89325 | 0.815222 | 1.03E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene89325 | 0.847727 | 9.63E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene89325 | 0.816577 | 5.15E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene89325 | 0.842162 | 3.06E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89325.t1 | MTR_7g063390 | 90.602 | 266 | 25 | 0 | 1 | 266 | 1 | 266 | 0.0 | 507 |
| MS.gene89325.t1 | MTR_7g063360 | 90.226 | 266 | 26 | 0 | 1 | 266 | 1 | 266 | 1.38e-180 | 497 |
| MS.gene89325.t1 | MTR_7g063260 | 78.491 | 265 | 57 | 0 | 1 | 265 | 1 | 265 | 1.06e-155 | 434 |
| MS.gene89325.t1 | MTR_7g063270 | 76.226 | 265 | 62 | 1 | 1 | 265 | 1 | 264 | 4.46e-152 | 425 |
| MS.gene89325.t1 | MTR_7g063330 | 74.717 | 265 | 65 | 2 | 1 | 265 | 1 | 263 | 6.20e-147 | 412 |
| MS.gene89325.t1 | MTR_7g063320 | 75.940 | 266 | 63 | 1 | 1 | 266 | 1 | 265 | 4.01e-146 | 410 |
| MS.gene89325.t1 | MTR_7g063270 | 61.132 | 265 | 53 | 3 | 1 | 265 | 1 | 215 | 4.34e-109 | 314 |
| MS.gene89325.t1 | MTR_3g068070 | 59.091 | 264 | 104 | 1 | 3 | 266 | 2 | 261 | 7.92e-108 | 313 |
| MS.gene89325.t1 | MTR_4g064883 | 56.250 | 256 | 108 | 1 | 11 | 266 | 9 | 260 | 5.96e-104 | 303 |
| MS.gene89325.t1 | MTR_3g068155 | 56.923 | 260 | 108 | 1 | 7 | 266 | 10 | 265 | 1.91e-102 | 300 |
| MS.gene89325.t1 | MTR_3g068085 | 58.566 | 251 | 100 | 1 | 16 | 266 | 15 | 261 | 4.48e-101 | 296 |
| MS.gene89325.t1 | MTR_3g068175 | 55.094 | 265 | 115 | 1 | 2 | 266 | 3 | 263 | 4.55e-99 | 291 |
| MS.gene89325.t1 | MTR_4g064887 | 53.759 | 266 | 118 | 2 | 1 | 266 | 1 | 261 | 2.11e-98 | 289 |
| MS.gene89325.t1 | MTR_3g068175 | 54.275 | 269 | 115 | 2 | 2 | 266 | 3 | 267 | 7.14e-97 | 285 |
| MS.gene89325.t1 | MTR_3g068065 | 57.087 | 254 | 97 | 2 | 16 | 265 | 17 | 262 | 5.15e-96 | 283 |
| MS.gene89325.t1 | MTR_4g064883 | 58.500 | 200 | 83 | 0 | 11 | 210 | 9 | 208 | 1.81e-83 | 249 |
| MS.gene89325.t1 | MTR_4g064887 | 54.634 | 205 | 92 | 1 | 1 | 205 | 1 | 204 | 1.72e-76 | 232 |
| MS.gene89325.t1 | MTR_4g132850 | 32.800 | 250 | 159 | 5 | 16 | 264 | 7 | 248 | 5.39e-26 | 102 |
| MS.gene89325.t1 | MTR_7g094510 | 30.859 | 256 | 163 | 7 | 16 | 264 | 6 | 254 | 6.10e-26 | 102 |
| MS.gene89325.t1 | MTR_7g094520 | 31.559 | 263 | 160 | 6 | 12 | 264 | 7 | 259 | 1.08e-25 | 102 |
| MS.gene89325.t1 | MTR_3g085740 | 29.482 | 251 | 160 | 6 | 22 | 266 | 81 | 320 | 9.72e-23 | 95.5 |
| MS.gene89325.t1 | MTR_4g052350 | 30.739 | 257 | 161 | 8 | 16 | 266 | 14 | 259 | 3.38e-21 | 90.5 |
| MS.gene89325.t1 | MTR_7g080410 | 29.756 | 205 | 138 | 4 | 4 | 203 | 26 | 229 | 1.50e-20 | 89.0 |
| MS.gene89325.t1 | MTR_1g068955 | 31.154 | 260 | 154 | 7 | 16 | 262 | 14 | 261 | 2.26e-20 | 88.2 |
| MS.gene89325.t1 | MTR_7g080410 | 29.756 | 205 | 138 | 4 | 4 | 203 | 26 | 229 | 2.30e-20 | 89.0 |
| MS.gene89325.t1 | MTR_8g442750 | 26.848 | 257 | 175 | 4 | 16 | 264 | 14 | 265 | 8.25e-20 | 87.0 |
| MS.gene89325.t1 | MTR_4g131740 | 28.788 | 264 | 164 | 7 | 16 | 266 | 40 | 292 | 5.23e-19 | 84.7 |
| MS.gene89325.t1 | MTR_4g058810 | 28.682 | 258 | 173 | 8 | 16 | 266 | 11 | 264 | 1.43e-18 | 83.2 |
| MS.gene89325.t1 | MTR_1196s0010 | 32.400 | 250 | 148 | 10 | 21 | 264 | 279 | 513 | 4.10e-18 | 84.0 |
| MS.gene89325.t1 | MTR_4g052300 | 28.682 | 258 | 165 | 8 | 16 | 266 | 8 | 253 | 6.08e-18 | 81.3 |
| MS.gene89325.t1 | MTR_4g058840 | 28.682 | 258 | 173 | 8 | 16 | 266 | 11 | 264 | 1.58e-17 | 80.5 |
| MS.gene89325.t1 | MTR_4g058820 | 28.682 | 258 | 173 | 8 | 16 | 266 | 11 | 264 | 1.58e-17 | 80.5 |
| MS.gene89325.t1 | MTR_6g023990 | 28.777 | 278 | 168 | 8 | 1 | 264 | 1 | 262 | 2.35e-17 | 79.7 |
| MS.gene89325.t1 | MTR_4g052320 | 28.682 | 258 | 166 | 7 | 16 | 266 | 8 | 254 | 1.23e-16 | 77.8 |
| MS.gene89325.t1 | MTR_7g083870 | 30.651 | 261 | 162 | 9 | 16 | 265 | 35 | 287 | 2.14e-16 | 77.8 |
| MS.gene89325.t1 | MTR_4g052340 | 27.953 | 254 | 172 | 6 | 16 | 266 | 14 | 259 | 2.31e-16 | 77.0 |
| MS.gene89325.t1 | MTR_7g071680 | 29.889 | 271 | 164 | 9 | 16 | 265 | 29 | 294 | 2.80e-16 | 77.4 |
| MS.gene89325.t1 | MTR_1g082760 | 26.154 | 260 | 175 | 7 | 16 | 266 | 40 | 291 | 5.12e-16 | 76.6 |
| MS.gene89325.t1 | MTR_6g023610 | 28.148 | 270 | 179 | 8 | 1 | 264 | 1 | 261 | 9.25e-16 | 75.5 |
| MS.gene89325.t1 | MTR_8g044240 | 30.348 | 201 | 128 | 6 | 16 | 206 | 69 | 267 | 1.18e-15 | 75.9 |
| MS.gene89325.t1 | MTR_4g078630 | 28.626 | 262 | 166 | 7 | 16 | 265 | 19 | 271 | 2.91e-15 | 74.3 |
| MS.gene89325.t1 | MTR_6g023590 | 27.843 | 255 | 172 | 7 | 16 | 264 | 13 | 261 | 4.34e-15 | 73.6 |
| MS.gene89325.t1 | MTR_7g107670 | 28.626 | 262 | 165 | 5 | 16 | 265 | 33 | 284 | 6.50e-14 | 70.5 |
| MS.gene89325.t1 | MTR_7g105460 | 26.459 | 257 | 175 | 7 | 16 | 266 | 13 | 261 | 1.03e-13 | 69.7 |
| MS.gene89325.t1 | MTR_7g105590 | 29.534 | 193 | 121 | 7 | 16 | 201 | 8 | 192 | 2.50e-13 | 67.4 |
| MS.gene89325.t1 | MTR_7g110160 | 30.000 | 260 | 150 | 8 | 13 | 266 | 3 | 236 | 3.58e-13 | 67.8 |
| MS.gene89325.t1 | MTR_6g023600 | 27.843 | 255 | 172 | 7 | 16 | 264 | 13 | 261 | 5.61e-13 | 67.4 |
| MS.gene89325.t1 | MTR_7g105580 | 27.953 | 254 | 155 | 9 | 16 | 265 | 8 | 237 | 1.08e-12 | 66.6 |
| MS.gene89325.t1 | MTR_6g023950 | 27.559 | 254 | 174 | 7 | 16 | 264 | 13 | 261 | 1.75e-12 | 66.2 |
| MS.gene89325.t1 | MTR_4g058830 | 31.210 | 157 | 102 | 5 | 113 | 266 | 57 | 210 | 2.40e-12 | 65.1 |
| MS.gene89325.t1 | MTR_3g098470 | 34.459 | 148 | 94 | 3 | 12 | 158 | 28 | 173 | 2.54e-12 | 66.2 |
| MS.gene89325.t1 | MTR_6g088500 | 27.317 | 205 | 128 | 6 | 22 | 206 | 184 | 387 | 3.69e-12 | 65.9 |
| MS.gene89325.t1 | MTR_6g088500 | 27.317 | 205 | 128 | 6 | 22 | 206 | 184 | 387 | 5.78e-12 | 65.9 |
| MS.gene89325.t1 | MTR_1g031180 | 34.228 | 149 | 93 | 4 | 12 | 158 | 33 | 178 | 1.70e-11 | 63.5 |
| MS.gene89325.t1 | MTR_1579s0020 | 32.143 | 84 | 52 | 1 | 182 | 265 | 1 | 79 | 3.59e-11 | 58.5 |
| MS.gene89325.t1 | MTR_8g096620 | 28.384 | 229 | 150 | 8 | 15 | 234 | 44 | 267 | 4.67e-11 | 62.8 |
| MS.gene89325.t1 | MTR_6g023600 | 27.451 | 255 | 167 | 7 | 16 | 264 | 13 | 255 | 5.62e-11 | 61.6 |
| MS.gene89325.t1 | MTR_1g051165 | 23.396 | 265 | 183 | 8 | 16 | 266 | 14 | 272 | 7.11e-11 | 61.6 |
| MS.gene89325.t1 | MTR_8g089575 | 27.749 | 191 | 133 | 3 | 18 | 203 | 47 | 237 | 9.07e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89325.t1 | AT5G06060 | 57.812 | 256 | 104 | 1 | 11 | 266 | 4 | 255 | 4.93e-108 | 313 |
| MS.gene89325.t1 | AT1G07440 | 55.642 | 257 | 109 | 1 | 10 | 266 | 6 | 257 | 5.49e-102 | 298 |
| MS.gene89325.t1 | AT2G29290 | 54.688 | 256 | 112 | 1 | 11 | 266 | 2 | 253 | 4.83e-99 | 290 |
| MS.gene89325.t1 | AT2G29340 | 54.297 | 256 | 113 | 2 | 11 | 266 | 2 | 253 | 2.16e-98 | 289 |
| MS.gene89325.t1 | AT2G29330 | 55.859 | 256 | 109 | 2 | 11 | 266 | 2 | 253 | 2.74e-98 | 288 |
| MS.gene89325.t1 | AT2G29300 | 54.789 | 261 | 105 | 3 | 11 | 266 | 2 | 254 | 5.01e-98 | 288 |
| MS.gene89325.t1 | AT2G29260 | 53.725 | 255 | 114 | 1 | 12 | 266 | 64 | 314 | 6.52e-98 | 290 |
| MS.gene89325.t1 | AT2G29340 | 54.297 | 256 | 113 | 2 | 11 | 266 | 2 | 253 | 9.16e-98 | 289 |
| MS.gene89325.t1 | AT2G29320 | 56.107 | 262 | 101 | 4 | 11 | 266 | 7 | 260 | 1.55e-97 | 287 |
| MS.gene89325.t1 | AT2G29360 | 53.383 | 266 | 120 | 1 | 1 | 266 | 1 | 262 | 2.40e-97 | 286 |
| MS.gene89325.t1 | AT2G29300 | 55.000 | 260 | 104 | 3 | 11 | 265 | 2 | 253 | 7.51e-97 | 286 |
| MS.gene89325.t1 | AT2G29150 | 54.511 | 266 | 116 | 3 | 1 | 266 | 1 | 261 | 4.51e-96 | 283 |
| MS.gene89325.t1 | AT2G30670 | 53.906 | 256 | 114 | 2 | 11 | 266 | 2 | 253 | 7.03e-96 | 282 |
| MS.gene89325.t1 | AT2G29310 | 54.688 | 256 | 112 | 2 | 11 | 266 | 2 | 253 | 8.47e-95 | 280 |
| MS.gene89325.t1 | AT2G29370 | 54.231 | 260 | 114 | 2 | 8 | 266 | 7 | 262 | 2.64e-94 | 278 |
| MS.gene89325.t1 | AT2G29350 | 54.475 | 257 | 112 | 1 | 10 | 266 | 9 | 260 | 4.28e-94 | 278 |
| MS.gene89325.t1 | AT1G07450 | 53.516 | 256 | 112 | 3 | 12 | 266 | 4 | 253 | 2.58e-93 | 276 |
| MS.gene89325.t1 | AT2G29320 | 54.167 | 240 | 97 | 3 | 32 | 266 | 11 | 242 | 2.59e-85 | 255 |
| MS.gene89325.t1 | AT2G29290 | 52.137 | 234 | 108 | 1 | 33 | 266 | 7 | 236 | 2.67e-84 | 252 |
| MS.gene89325.t1 | AT2G29310 | 52.340 | 235 | 108 | 2 | 32 | 266 | 21 | 251 | 2.54e-80 | 243 |
| MS.gene89325.t1 | AT2G29340 | 55.500 | 200 | 89 | 0 | 11 | 210 | 2 | 201 | 2.30e-78 | 236 |
| MS.gene89325.t1 | AT2G29340 | 55.500 | 200 | 89 | 0 | 11 | 210 | 2 | 201 | 2.30e-78 | 236 |
| MS.gene89325.t1 | AT2G29320 | 59.487 | 195 | 77 | 2 | 11 | 203 | 7 | 201 | 1.42e-77 | 234 |
| MS.gene89325.t1 | AT2G29350 | 52.212 | 226 | 103 | 1 | 41 | 266 | 2 | 222 | 5.04e-77 | 233 |
| MS.gene89325.t1 | AT2G29350 | 57.653 | 196 | 83 | 0 | 10 | 205 | 9 | 204 | 1.04e-75 | 230 |
| MS.gene89325.t1 | AT2G29310 | 55.000 | 200 | 90 | 0 | 11 | 210 | 2 | 201 | 4.89e-74 | 224 |
| MS.gene89325.t1 | AT1G07440 | 57.927 | 164 | 69 | 0 | 10 | 173 | 6 | 169 | 8.47e-66 | 202 |
| MS.gene89325.t1 | AT2G29310 | 51.955 | 179 | 86 | 0 | 32 | 210 | 21 | 199 | 2.72e-59 | 187 |
| MS.gene89325.t1 | AT2G29170 | 64.583 | 96 | 33 | 1 | 8 | 102 | 7 | 102 | 2.46e-39 | 133 |
| MS.gene89325.t1 | AT3G03980 | 35.556 | 270 | 157 | 4 | 7 | 264 | 5 | 269 | 2.36e-37 | 133 |
| MS.gene89325.t1 | AT5G18210 | 34.363 | 259 | 155 | 6 | 15 | 264 | 7 | 259 | 3.12e-32 | 119 |
| MS.gene89325.t1 | AT4G13180 | 33.721 | 258 | 157 | 6 | 16 | 266 | 13 | 263 | 1.60e-29 | 112 |
| MS.gene89325.t1 | AT5G18210 | 33.333 | 261 | 146 | 7 | 15 | 266 | 7 | 248 | 1.16e-28 | 110 |
| MS.gene89325.t1 | AT3G04000 | 34.074 | 270 | 160 | 5 | 7 | 263 | 5 | 269 | 2.12e-27 | 107 |
| MS.gene89325.t1 | AT4G05530 | 33.200 | 250 | 158 | 5 | 16 | 264 | 9 | 250 | 5.06e-27 | 105 |
| MS.gene89325.t1 | AT1G24360 | 31.873 | 251 | 154 | 8 | 22 | 266 | 80 | 319 | 7.22e-25 | 101 |
| MS.gene89325.t1 | AT3G05260 | 30.418 | 263 | 159 | 7 | 16 | 266 | 37 | 287 | 1.46e-22 | 94.4 |
| MS.gene89325.t1 | AT3G03330 | 31.980 | 197 | 129 | 3 | 12 | 203 | 37 | 233 | 2.23e-21 | 92.0 |
| MS.gene89325.t1 | AT1G54870 | 28.016 | 257 | 168 | 7 | 16 | 263 | 82 | 330 | 7.32e-21 | 90.5 |
| MS.gene89325.t1 | AT1G54870 | 28.016 | 257 | 168 | 7 | 16 | 263 | 84 | 332 | 8.70e-21 | 90.5 |
| MS.gene89325.t1 | AT3G12800 | 26.616 | 263 | 169 | 6 | 16 | 264 | 10 | 262 | 2.13e-20 | 88.6 |
| MS.gene89325.t1 | AT3G55290 | 28.302 | 265 | 165 | 9 | 16 | 266 | 17 | 270 | 1.80e-17 | 80.5 |
| MS.gene89325.t1 | AT3G55290 | 28.302 | 265 | 165 | 9 | 16 | 266 | 18 | 271 | 1.90e-17 | 80.5 |
| MS.gene89325.t1 | AT3G26760 | 28.148 | 270 | 173 | 7 | 9 | 265 | 29 | 290 | 3.33e-17 | 80.1 |
| MS.gene89325.t1 | AT3G51680 | 28.114 | 281 | 181 | 7 | 1 | 265 | 20 | 295 | 1.29e-16 | 78.2 |
| MS.gene89325.t1 | AT3G06060 | 27.751 | 209 | 142 | 3 | 16 | 220 | 37 | 240 | 1.52e-16 | 78.6 |
| MS.gene89325.t1 | AT5G50690 | 30.303 | 198 | 122 | 7 | 16 | 208 | 45 | 231 | 1.54e-16 | 77.4 |
| MS.gene89325.t1 | AT5G50590 | 30.303 | 198 | 122 | 7 | 16 | 208 | 45 | 231 | 1.54e-16 | 77.4 |
| MS.gene89325.t1 | AT3G06060 | 27.751 | 209 | 142 | 3 | 16 | 220 | 54 | 257 | 1.65e-16 | 78.6 |
| MS.gene89325.t1 | AT3G55310 | 28.462 | 260 | 171 | 9 | 16 | 266 | 17 | 270 | 2.24e-16 | 77.4 |
| MS.gene89325.t1 | AT5G50690 | 30.303 | 198 | 122 | 7 | 16 | 208 | 45 | 231 | 3.67e-16 | 77.0 |
| MS.gene89325.t1 | AT5G50590 | 30.303 | 198 | 122 | 7 | 16 | 208 | 45 | 231 | 3.67e-16 | 77.0 |
| MS.gene89325.t1 | AT5G04900 | 30.928 | 194 | 123 | 6 | 22 | 206 | 83 | 274 | 5.94e-16 | 77.0 |
| MS.gene89325.t1 | AT1G63380 | 25.969 | 258 | 181 | 8 | 16 | 266 | 19 | 273 | 8.53e-16 | 75.9 |
| MS.gene89325.t1 | AT3G42960 | 31.128 | 257 | 157 | 9 | 21 | 265 | 13 | 261 | 8.93e-16 | 75.5 |
| MS.gene89325.t1 | AT1G63380 | 25.969 | 258 | 181 | 8 | 16 | 266 | 15 | 269 | 9.73e-16 | 75.5 |
| MS.gene89325.t1 | AT1G63380 | 25.969 | 258 | 181 | 8 | 16 | 266 | 17 | 271 | 9.86e-16 | 75.5 |
| MS.gene89325.t1 | AT3G03350 | 33.758 | 157 | 91 | 3 | 51 | 204 | 207 | 353 | 1.04e-15 | 76.3 |
| MS.gene89325.t1 | AT1G63380 | 25.969 | 258 | 181 | 8 | 16 | 266 | 22 | 276 | 1.05e-15 | 75.5 |
| MS.gene89325.t1 | AT3G46170 | 27.099 | 262 | 172 | 8 | 16 | 266 | 26 | 279 | 1.63e-15 | 75.1 |
| MS.gene89325.t1 | AT4G03140 | 28.125 | 256 | 174 | 7 | 16 | 265 | 78 | 329 | 1.65e-15 | 75.5 |
| MS.gene89325.t1 | AT1G62610 | 25.969 | 258 | 181 | 8 | 16 | 266 | 15 | 269 | 2.45e-15 | 74.3 |
| MS.gene89325.t1 | AT1G62610 | 25.969 | 258 | 181 | 8 | 16 | 266 | 19 | 273 | 2.70e-15 | 74.3 |
| MS.gene89325.t1 | AT1G62610 | 25.969 | 258 | 181 | 8 | 16 | 266 | 13 | 267 | 2.89e-15 | 74.3 |
| MS.gene89325.t1 | AT1G62610 | 25.969 | 258 | 181 | 8 | 16 | 266 | 14 | 268 | 3.04e-15 | 73.9 |
| MS.gene89325.t1 | AT2G47130 | 27.451 | 255 | 174 | 7 | 16 | 266 | 6 | 253 | 3.28e-14 | 70.9 |
| MS.gene89325.t1 | AT4G13250 | 28.293 | 205 | 126 | 4 | 22 | 206 | 165 | 368 | 5.25e-14 | 72.0 |
| MS.gene89325.t1 | AT3G26770 | 29.434 | 265 | 160 | 11 | 16 | 265 | 41 | 293 | 1.21e-13 | 70.1 |
| MS.gene89325.t1 | AT3G47360 | 27.830 | 212 | 142 | 6 | 20 | 226 | 49 | 254 | 2.39e-13 | 68.9 |
| MS.gene89325.t1 | AT2G17845 | 22.901 | 262 | 186 | 7 | 16 | 266 | 47 | 303 | 9.36e-13 | 67.4 |
| MS.gene89325.t1 | AT5G65205 | 29.609 | 179 | 119 | 4 | 22 | 199 | 12 | 184 | 1.73e-12 | 66.2 |
| MS.gene89325.t1 | AT1G49670 | 31.863 | 204 | 122 | 8 | 18 | 207 | 6 | 206 | 1.75e-12 | 67.4 |
| MS.gene89325.t1 | AT1G49670 | 31.863 | 204 | 122 | 8 | 18 | 207 | 6 | 206 | 1.83e-12 | 67.4 |
| MS.gene89325.t1 | AT5G50600 | 30.653 | 199 | 125 | 8 | 15 | 207 | 44 | 235 | 2.01e-12 | 66.6 |
| MS.gene89325.t1 | AT5G50700 | 30.653 | 199 | 125 | 8 | 15 | 207 | 44 | 235 | 2.01e-12 | 66.6 |
| MS.gene89325.t1 | AT5G19200 | 26.289 | 194 | 134 | 3 | 22 | 211 | 41 | 229 | 5.22e-12 | 65.5 |
| MS.gene89325.t1 | AT5G10050 | 27.895 | 190 | 130 | 4 | 22 | 210 | 11 | 194 | 6.84e-12 | 64.7 |
| MS.gene89325.t1 | AT4G13250 | 27.805 | 205 | 125 | 5 | 22 | 206 | 165 | 366 | 8.83e-12 | 65.1 |
| MS.gene89325.t1 | AT3G29260 | 28.195 | 266 | 158 | 9 | 16 | 266 | 6 | 253 | 2.36e-11 | 62.8 |
Find 58 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGAAGAGTTAGCAGAATT+TGG | 0.185342 | 7.3:-41994788 | MS.gene89325:CDS |
| CCATTCCAATGCTAAGTTCT+TGG | 0.203591 | 7.3:+41993525 | None:intergenic |
| ATAATTAAAATTACCTTTAG+AGG | 0.224046 | 7.3:+41993656 | None:intergenic |
| ACCTGTGATGACCTTACTTT+TGG | 0.297664 | 7.3:-41993464 | MS.gene89325:CDS |
| CTTCTAAAACAATCTGGATA+TGG | 0.305242 | 7.3:-41993744 | MS.gene89325:CDS |
| TTAACAAATGTTTGAAAGAA+TGG | 0.322643 | 7.3:-41994727 | MS.gene89325:CDS |
| CTATTATCTAAGATGGGTTT+AGG | 0.327782 | 7.3:+41993840 | None:intergenic |
| TTCATCGCTATTATCTAAGA+TGG | 0.354604 | 7.3:+41993833 | None:intergenic |
| GTTCTTGGCGCATTGATTCA+TGG | 0.382444 | 7.3:+41993540 | None:intergenic |
| AACTGTTAGGTAAACAATGC+TGG | 0.396239 | 7.3:-41993873 | MS.gene89325:intron |
| GGAATGACAGCTCTAGTAAC+TGG | 0.411724 | 7.3:-41994942 | MS.gene89325:CDS |
| TACCCTCTTCTAAAACAATC+TGG | 0.416961 | 7.3:-41993750 | MS.gene89325:CDS |
| ATGGTAACCAGACACAAAAT+TGG | 0.420948 | 7.3:+41993788 | None:intergenic |
| GTATTCATATCCTCAATTGC+AGG | 0.429771 | 7.3:-41993714 | MS.gene89325:CDS |
| GGTATGCAAGTTGGCACAAA+TGG | 0.438987 | 7.3:+41993769 | None:intergenic |
| TTACTAGAGCTGTCATTCCT+TGG | 0.449411 | 7.3:+41994946 | None:intergenic |
| GAAGATATAACAACTACAAT+TGG | 0.452153 | 7.3:-41993813 | MS.gene89325:CDS |
| ACAGTAGCTTCAATCTTTCA+AGG | 0.454086 | 7.3:-41994629 | MS.gene89325:CDS |
| CGTGCTAATGTTGTGGCACC+TGG | 0.457313 | 7.3:-41993487 | MS.gene89325:CDS |
| TCTGTCTATGCAGCCTCTAA+AGG | 0.472464 | 7.3:-41993669 | MS.gene89325:intron |
| CATAGCATTCTCCAAAAGTA+AGG | 0.480973 | 7.3:+41993453 | None:intergenic |
| ATCAATCAGGTATGCAATTG+TGG | 0.492239 | 7.3:-41994807 | MS.gene89325:intron |
| ACTGGTGGAACCCGAGGCAT+AGG | 0.498705 | 7.3:-41994924 | MS.gene89325:CDS |
| CAAGAACTTAGCATTGGAAT+GGG | 0.501708 | 7.3:-41993524 | MS.gene89325:CDS |
| CCAAGAACTTAGCATTGGAA+TGG | 0.503939 | 7.3:-41993525 | MS.gene89325:CDS |
| AGCTTTGAGACCTGCAATTG+AGG | 0.508653 | 7.3:+41993704 | None:intergenic |
| ACCAATGCTGATATATCCTT+AGG | 0.521567 | 7.3:+41993062 | None:intergenic |
| CAAACACCTAGTGGTCGGAT+TGG | 0.521725 | 7.3:-41993089 | MS.gene89325:CDS |
| TCATCGCTATTATCTAAGAT+GGG | 0.523341 | 7.3:+41993834 | None:intergenic |
| GAGAACTGACCCTATGCCTC+GGG | 0.531174 | 7.3:+41994914 | None:intergenic |
| ACCTAAGGATATATCAGCAT+TGG | 0.534231 | 7.3:-41993063 | MS.gene89325:CDS |
| AGTAAGGTCATCACAGGTCC+AGG | 0.537665 | 7.3:+41993469 | None:intergenic |
| ACTGTTAGGTAAACAATGCT+GGG | 0.538511 | 7.3:-41993872 | MS.gene89325:intron |
| TCCAAAAGTAAGGTCATCAC+AGG | 0.548783 | 7.3:+41993463 | None:intergenic |
| TGGTCGGATTGGAGAACCTA+AGG | 0.554317 | 7.3:-41993078 | MS.gene89325:CDS |
| GGTTCTCCAATCCGACCACT+AGG | 0.556909 | 7.3:+41993083 | None:intergenic |
| TTGAAAGAATGGAAAGGCAA+AGG | 0.557601 | 7.3:-41994716 | MS.gene89325:CDS |
| TTAGAAGAGGGTATGCAAGT+TGG | 0.557653 | 7.3:+41993760 | None:intergenic |
| ATGCGCCAAGAACTTAGCAT+TGG | 0.567165 | 7.3:-41993530 | MS.gene89325:CDS |
| CCAACTGCATCACACATCAC+TGG | 0.570626 | 7.3:-41993023 | MS.gene89325:CDS |
| CTTAGCATTGGAATGGGCAA+AGG | 0.572011 | 7.3:-41993518 | MS.gene89325:CDS |
| AGAGAACTGACCCTATGCCT+CGG | 0.576626 | 7.3:+41994913 | None:intergenic |
| GCAGCTTCAAAGATCAAAGA+TGG | 0.579135 | 7.3:-41994974 | MS.gene89325:CDS |
| TAATATTCGTGCTAATGTTG+TGG | 0.582808 | 7.3:-41993494 | MS.gene89325:CDS |
| GCTGCATAGACAGAAACAAA+AGG | 0.589616 | 7.3:+41993678 | None:intergenic |
| GGACAAATTATAGCAGCAGA+TGG | 0.590646 | 7.3:-41993002 | MS.gene89325:CDS |
| GATCAAAGATGGTCACTCCA+AGG | 0.595452 | 7.3:-41994963 | MS.gene89325:CDS |
| TTTCTCAAACACCTAGTGGT+CGG | 0.609517 | 7.3:-41993094 | MS.gene89325:CDS |
| CAAATTATAGCAGCAGATGG+AGG | 0.609645 | 7.3:-41992999 | MS.gene89325:CDS |
| CTGGTGGAACCCGAGGCATA+GGG | 0.613722 | 7.3:-41994923 | MS.gene89325:intron |
| CTCGACAACATTATCCACTC+CGG | 0.615069 | 7.3:+41993124 | None:intergenic |
| CTAGTAACTGGTGGAACCCG+AGG | 0.629591 | 7.3:-41994930 | MS.gene89325:CDS |
| CGGAGTGGATAATGTTGTCG+AGG | 0.633007 | 7.3:-41993123 | MS.gene89325:CDS |
| CCAGTGATGTGTGATGCAGT+TGG | 0.638780 | 7.3:+41993023 | None:intergenic |
| ATAGTTTCTCAAACACCTAG+TGG | 0.647198 | 7.3:-41993098 | MS.gene89325:CDS |
| AAATGTTTGAAAGAATGGAA+AGG | 0.648117 | 7.3:-41994722 | MS.gene89325:CDS |
| ATAGAAATTAGATGCCGGAG+TGG | 0.664921 | 7.3:-41993138 | MS.gene89325:intron |
| ATGACAGCTCTAGTAACTGG+TGG | 0.670365 | 7.3:-41994939 | MS.gene89325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAAGTTATTAAGTTT+CGG | - | chr7.3:41993552-41993571 | MS.gene89325:intron | 10.0% |
| !!! | TAAATTTTTTATATTTTTGG+TGG | - | chr7.3:41993968-41993987 | MS.gene89325:intron | 10.0% |
| !!! | TTATTAAAGTTTTTTTTGAA+AGG | - | chr7.3:41993523-41993542 | MS.gene89325:CDS | 10.0% |
| !! | AGTTAATTAGACAAAAAAAA+AGG | + | chr7.3:41993594-41993613 | None:intergenic | 15.0% |
| !! | ATAATTAAAATTACCTTTAG+AGG | + | chr7.3:41994326-41994345 | None:intergenic | 15.0% |
| !!! | CAATTGACTTTATTATAAAA+TGG | + | chr7.3:41993791-41993810 | None:intergenic | 15.0% |
| !!! | TAATCATTCAAATTTGATTT+TGG | - | chr7.3:41993397-41993416 | MS.gene89325:intron | 15.0% |
| !! | AATAAACATACATAGTCAAA+TGG | + | chr7.3:41994068-41994087 | None:intergenic | 20.0% |
| !! | ACTTTAATAAAATACCATTG+TGG | + | chr7.3:41993513-41993532 | None:intergenic | 20.0% |
| !! | AGAATACAAAAGTTCAAATT+AGG | + | chr7.3:41994771-41994790 | None:intergenic | 20.0% |
| !! | CTTTAATAAAATACCATTGT+GGG | + | chr7.3:41993512-41993531 | None:intergenic | 20.0% |
| !! | TATGATTTATTCACATAGTT+TGG | - | chr7.3:41994550-41994569 | MS.gene89325:intron | 20.0% |
| !! | TCATATTATATCCTTTAACT+TGG | - | chr7.3:41994352-41994371 | MS.gene89325:intron | 20.0% |
| !! | TTAACAAATGTTTGAAAGAA+TGG | - | chr7.3:41993252-41993271 | MS.gene89325:intron | 20.0% |
| !!! | AATTTATTTTAGAGGATAGT+AGG | + | chr7.3:41993937-41993956 | None:intergenic | 20.0% |
| !!! | AGCAAGATAATTTATTTTAG+AGG | + | chr7.3:41993945-41993964 | None:intergenic | 20.0% |
| !!! | TATAATTAAAAAGAGCACTA+AGG | + | chr7.3:41994045-41994064 | None:intergenic | 20.0% |
| !!! | TTTTTATAGAAATTAGATGC+CGG | - | chr7.3:41994836-41994855 | MS.gene89325:intron | 20.0% |
| ! | AAACCTTAAAGGTGAATAAA+CGG | - | chr7.3:41993634-41993653 | MS.gene89325:intron | 25.0% |
| ! | AAATGTTTGAAAGAATGGAA+AGG | - | chr7.3:41993257-41993276 | MS.gene89325:intron | 25.0% |
| ! | ATTGAATTTCTCAAACTGTT+AGG | - | chr7.3:41994093-41994112 | MS.gene89325:intron | 25.0% |
| ! | CAATACATTGTAATATGCAT+TGG | + | chr7.3:41993683-41993702 | None:intergenic | 25.0% |
| ! | GAAGATATAACAACTACAAT+TGG | - | chr7.3:41994166-41994185 | MS.gene89325:intron | 25.0% |
| ! | TATACAATCAAAACAAAGCA+GGG | - | chr7.3:41993443-41993462 | MS.gene89325:intron | 25.0% |
| ! | TCAATTGAGTTATTCTTACA+AGG | - | chr7.3:41993709-41993728 | MS.gene89325:CDS | 25.0% |
| ! | TTATACAATCAAAACAAAGC+AGG | - | chr7.3:41993442-41993461 | MS.gene89325:intron | 25.0% |
| !! | AAATTTTTACAAACCCACAA+TGG | - | chr7.3:41993496-41993515 | MS.gene89325:CDS | 25.0% |
| !! | TCTTTTGTGAATAATCAATC+AGG | - | chr7.3:41993159-41993178 | MS.gene89325:intron | 25.0% |
| !!! | ACGCAACTAATTTTTTTGAA+GGG | + | chr7.3:41994688-41994707 | None:intergenic | 25.0% |
| !!! | ATTCCTATTTCTATCTATGT+AGG | - | chr7.3:41994414-41994433 | MS.gene89325:intron | 25.0% |
| AAATTAGGCCAAATTAGACA+TGG | + | chr7.3:41994756-41994775 | None:intergenic | 30.0% | |
| AACCTTAAAGGTGAATAAAC+GGG | - | chr7.3:41993635-41993654 | MS.gene89325:intron | 30.0% | |
| ACTGCAAAATTCCAAGTTAA+AGG | + | chr7.3:41994366-41994385 | None:intergenic | 30.0% | |
| ATACAATCAAAACAAAGCAG+GGG | - | chr7.3:41993444-41993463 | MS.gene89325:intron | 30.0% | |
| CTAAATTGCCATGTCTAATT+TGG | - | chr7.3:41994745-41994764 | MS.gene89325:CDS | 30.0% | |
| GTTACATGAGAAAAACTAAG+AGG | + | chr7.3:41994005-41994024 | None:intergenic | 30.0% | |
| TAATATTCGTGCTAATGTTG+TGG | - | chr7.3:41994485-41994504 | MS.gene89325:intron | 30.0% | |
| TCTCTAATGAGAACTTGTAA+TGG | - | chr7.3:41993104-41993123 | MS.gene89325:CDS | 30.0% | |
| TTATTCACATAGTTTGGCAA+AGG | - | chr7.3:41994556-41994575 | MS.gene89325:intron | 30.0% | |
| TTCATCGCTATTATCTAAGA+TGG | + | chr7.3:41994149-41994168 | None:intergenic | 30.0% | |
| ! | CTATTATCTAAGATGGGTTT+AGG | + | chr7.3:41994142-41994161 | None:intergenic | 30.0% |
| ! | TCATCGCTATTATCTAAGAT+GGG | + | chr7.3:41994148-41994167 | None:intergenic | 30.0% |
| ! | TGTCTAATTAACTAGCTTAG+TGG | - | chr7.3:41993601-41993620 | MS.gene89325:intron | 30.0% |
| ! | TTTCCATCAATTTTTCACGT+TGG | + | chr7.3:41993331-41993350 | None:intergenic | 30.0% |
| !! | CTTCTAAAACAATCTGGATA+TGG | - | chr7.3:41994235-41994254 | MS.gene89325:intron | 30.0% |
| !!! | ACCTTTAAGGTTTCATTTTC+CGG | + | chr7.3:41993627-41993646 | None:intergenic | 30.0% |
| !!! | ATCCAGATTGTTTTAGAAGA+GGG | + | chr7.3:41994234-41994253 | None:intergenic | 30.0% |
| !!! | GACGCAACTAATTTTTTTGA+AGG | + | chr7.3:41994689-41994708 | None:intergenic | 30.0% |
| !!! | GATTTAGTTTTGTTGAGACA+TGG | - | chr7.3:41993810-41993829 | MS.gene89325:CDS | 30.0% |
| !!! | TATCCAGATTGTTTTAGAAG+AGG | + | chr7.3:41994235-41994254 | None:intergenic | 30.0% |
| AACTGTTAGGTAAACAATGC+TGG | - | chr7.3:41994106-41994125 | MS.gene89325:intron | 35.0% | |
| ACAGTAGCTTCAATCTTTCA+AGG | - | chr7.3:41993350-41993369 | MS.gene89325:intron | 35.0% | |
| ACCAATGCTGATATATCCTT+AGG | + | chr7.3:41994920-41994939 | None:intergenic | 35.0% | |
| ACCTAAGGATATATCAGCAT+TGG | - | chr7.3:41994916-41994935 | MS.gene89325:intron | 35.0% | |
| ACTGTTAGGTAAACAATGCT+GGG | - | chr7.3:41994107-41994126 | MS.gene89325:intron | 35.0% | |
| ATAGTTTCTCAAACACCTAG+TGG | - | chr7.3:41994881-41994900 | MS.gene89325:intron | 35.0% | |
| ATCAATCAGGTATGCAATTG+TGG | - | chr7.3:41993172-41993191 | MS.gene89325:intron | 35.0% | |
| ATGGTAACCAGACACAAAAT+TGG | + | chr7.3:41994194-41994213 | None:intergenic | 35.0% | |
| CATAGCATTCTCCAAAAGTA+AGG | + | chr7.3:41994529-41994548 | None:intergenic | 35.0% | |
| GCTCCTACATAGATAGAAAT+AGG | + | chr7.3:41994420-41994439 | None:intergenic | 35.0% | |
| GTATTCATATCCTCAATTGC+AGG | - | chr7.3:41994265-41994284 | MS.gene89325:intron | 35.0% | |
| TGACCAACGTGAAAAATTGA+TGG | - | chr7.3:41993325-41993344 | MS.gene89325:intron | 35.0% | |
| TTCCCGTTTATTCACCTTTA+AGG | + | chr7.3:41993640-41993659 | None:intergenic | 35.0% | |
| TTGAAAGAATGGAAAGGCAA+AGG | - | chr7.3:41993263-41993282 | MS.gene89325:intron | 35.0% | |
| ! | ATTGGTACCAATTTTGTGTC+TGG | - | chr7.3:41994184-41994203 | MS.gene89325:intron | 35.0% |
| ! | CAAGAACTTAGCATTGGAAT+GGG | - | chr7.3:41994455-41994474 | MS.gene89325:intron | 35.0% |
| ! | GCAAAGGATTTTGTGTAACA+GGG | - | chr7.3:41993279-41993298 | MS.gene89325:intron | 35.0% |
| ! | TAATTAACTAGCTTAGTGGC+CGG | - | chr7.3:41993605-41993624 | MS.gene89325:intron | 35.0% |
| !! | CTTACTTTTGGAGAATGCTA+TGG | - | chr7.3:41994527-41994546 | MS.gene89325:intron | 35.0% |
| !! | TACCCTCTTCTAAAACAATC+TGG | - | chr7.3:41994229-41994248 | MS.gene89325:intron | 35.0% |
| ATAGAAATTAGATGCCGGAG+TGG | - | chr7.3:41994841-41994860 | MS.gene89325:intron | 40.0% | |
| CAAATTATAGCAGCAGATGG+AGG | - | chr7.3:41994980-41994999 | MS.gene89325:CDS | 40.0% | |
| CCATTCCAATGCTAAGTTCT+TGG | + | chr7.3:41994457-41994476 | None:intergenic | 40.0% | |
| GCAGCTTCAAAGATCAAAGA+TGG | - | chr7.3:41993005-41993024 | MS.gene89325:CDS | 40.0% | |
| GCCGGAAAATGAAACCTTAA+AGG | - | chr7.3:41993623-41993642 | MS.gene89325:intron | 40.0% | |
| GCTGCATAGACAGAAACAAA+AGG | + | chr7.3:41994304-41994323 | None:intergenic | 40.0% | |
| GGACAAATTATAGCAGCAGA+TGG | - | chr7.3:41994977-41994996 | MS.gene89325:CDS | 40.0% | |
| GTGGAAGAGTTAGCAGAATT+TGG | - | chr7.3:41993191-41993210 | MS.gene89325:intron | 40.0% | |
| TCCAAAAGTAAGGTCATCAC+AGG | + | chr7.3:41994519-41994538 | None:intergenic | 40.0% | |
| TTACTAGAGCTGTCATTCCT+TGG | + | chr7.3:41993036-41993055 | None:intergenic | 40.0% | |
| TTTCTCAAACACCTAGTGGT+CGG | - | chr7.3:41994885-41994904 | MS.gene89325:intron | 40.0% | |
| ! | ACCTGTGATGACCTTACTTT+TGG | - | chr7.3:41994515-41994534 | MS.gene89325:intron | 40.0% |
| ! | ATGCTCTTAGAGCACTTGAT+AGG | + | chr7.3:41993839-41993858 | None:intergenic | 40.0% |
| ! | CCAAGAACTTAGCATTGGAA+TGG | - | chr7.3:41994454-41994473 | MS.gene89325:intron | 40.0% |
| ! | GGCAAAGGATTTTGTGTAAC+AGG | - | chr7.3:41993278-41993297 | MS.gene89325:intron | 40.0% |
| ! | TTAGAAGAGGGTATGCAAGT+TGG | + | chr7.3:41994222-41994241 | None:intergenic | 40.0% |
| ATGCGCCAAGAACTTAGCAT+TGG | - | chr7.3:41994449-41994468 | MS.gene89325:intron | 45.0% | |
| CATGCGCTCACATATTGAGA+AGG | - | chr7.3:41994585-41994604 | MS.gene89325:intron | 45.0% | |
| CTCGACAACATTATCCACTC+CGG | + | chr7.3:41994858-41994877 | None:intergenic | 45.0% | |
| CTTCTCAATATGTGAGCGCA+TGG | + | chr7.3:41994587-41994606 | None:intergenic | 45.0% | |
| GATCAAAGATGGTCACTCCA+AGG | - | chr7.3:41993016-41993035 | MS.gene89325:CDS | 45.0% | |
| TCTGTCTATGCAGCCTCTAA+AGG | - | chr7.3:41994310-41994329 | MS.gene89325:intron | 45.0% | |
| ! | ATGACAGCTCTAGTAACTGG+TGG | - | chr7.3:41993040-41993059 | MS.gene89325:CDS | 45.0% |
| ! | CTTAGCATTGGAATGGGCAA+AGG | - | chr7.3:41994461-41994480 | MS.gene89325:intron | 45.0% |
| ! | GGAATGACAGCTCTAGTAAC+TGG | - | chr7.3:41993037-41993056 | MS.gene89325:CDS | 45.0% |
| ! | GGTATGCAAGTTGGCACAAA+TGG | + | chr7.3:41994213-41994232 | None:intergenic | 45.0% |
| !! | AGCTTTGAGACCTGCAATTG+AGG | + | chr7.3:41994278-41994297 | None:intergenic | 45.0% |
| !! | GTTCTTGGCGCATTGATTCA+TGG | + | chr7.3:41994442-41994461 | None:intergenic | 45.0% |
| !!! | ACAAAGCAGGGGTTAGCTTT+TGG | - | chr7.3:41993455-41993474 | MS.gene89325:CDS | 45.0% |
| !!! | AACTAAATTTTTTATATTTT+TGG | - | chr7.3:41993965-41993984 | MS.gene89325:intron | 5.0% |
| AGAGAACTGACCCTATGCCT+CGG | + | chr7.3:41993069-41993088 | None:intergenic | 50.0% | |
| AGTAAGGTCATCACAGGTCC+AGG | + | chr7.3:41994513-41994532 | None:intergenic | 50.0% | |
| CAAACACCTAGTGGTCGGAT+TGG | - | chr7.3:41994890-41994909 | MS.gene89325:intron | 50.0% | |
| CCAACTGCATCACACATCAC+TGG | - | chr7.3:41994956-41994975 | MS.gene89325:CDS | 50.0% | |
| CCAGTGATGTGTGATGCAGT+TGG | + | chr7.3:41994959-41994978 | None:intergenic | 50.0% | |
| CGGAGTGGATAATGTTGTCG+AGG | - | chr7.3:41994856-41994875 | MS.gene89325:intron | 50.0% | |
| ! | TGGTCGGATTGGAGAACCTA+AGG | - | chr7.3:41994901-41994920 | MS.gene89325:intron | 50.0% |
| CGTGCTAATGTTGTGGCACC+TGG | - | chr7.3:41994492-41994511 | MS.gene89325:intron | 55.0% | |
| CTAGTAACTGGTGGAACCCG+AGG | - | chr7.3:41993049-41993068 | MS.gene89325:CDS | 55.0% | |
| GAGAACTGACCCTATGCCTC+GGG | + | chr7.3:41993068-41993087 | None:intergenic | 55.0% | |
| GGTTCTCCAATCCGACCACT+AGG | + | chr7.3:41994899-41994918 | None:intergenic | 55.0% | |
| ACTGGTGGAACCCGAGGCAT+AGG | - | chr7.3:41993055-41993074 | MS.gene89325:CDS | 60.0% | |
| CTGGTGGAACCCGAGGCATA+GGG | - | chr7.3:41993056-41993075 | MS.gene89325:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 41992986 | 41995015 | 41992986 | ID=MS.gene89325 |
| chr7.3 | mRNA | 41992986 | 41995015 | 41992986 | ID=MS.gene89325.t1;Parent=MS.gene89325 |
| chr7.3 | exon | 41994924 | 41995015 | 41994924 | ID=MS.gene89325.t1.exon1;Parent=MS.gene89325.t1 |
| chr7.3 | CDS | 41994924 | 41995015 | 41994924 | ID=cds.MS.gene89325.t1;Parent=MS.gene89325.t1 |
| chr7.3 | exon | 41994613 | 41994820 | 41994613 | ID=MS.gene89325.t1.exon2;Parent=MS.gene89325.t1 |
| chr7.3 | CDS | 41994613 | 41994820 | 41994613 | ID=cds.MS.gene89325.t1;Parent=MS.gene89325.t1 |
| chr7.3 | exon | 41993670 | 41993886 | 41993670 | ID=MS.gene89325.t1.exon3;Parent=MS.gene89325.t1 |
| chr7.3 | CDS | 41993670 | 41993886 | 41993670 | ID=cds.MS.gene89325.t1;Parent=MS.gene89325.t1 |
| chr7.3 | exon | 41993453 | 41993565 | 41993453 | ID=MS.gene89325.t1.exon4;Parent=MS.gene89325.t1 |
| chr7.3 | CDS | 41993453 | 41993565 | 41993453 | ID=cds.MS.gene89325.t1;Parent=MS.gene89325.t1 |
| chr7.3 | exon | 41992986 | 41993156 | 41992986 | ID=MS.gene89325.t1.exon5;Parent=MS.gene89325.t1 |
| chr7.3 | CDS | 41992986 | 41993156 | 41992986 | ID=cds.MS.gene89325.t1;Parent=MS.gene89325.t1 |
| Gene Sequence |
| Protein sequence |
