AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90983

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90983.t1 MTR_4g073730 95.706 326 14 0 1 326 1 326 0.0 636
MS.gene90983.t1 MTR_4g073730 96.181 288 11 0 1 288 1 288 0.0 568
MS.gene90983.t1 MTR_1g025420 53.918 319 131 5 5 309 4 320 1.68e-114 334
MS.gene90983.t1 MTR_8g037890 62.857 245 82 3 5 248 11 247 9.02e-112 327
MS.gene90983.t1 MTR_8g056820 62.857 245 82 3 5 248 11 247 2.39e-109 319
MS.gene90983.t1 MTR_5g022310 57.857 280 112 4 3 280 6 281 1.78e-108 318
MS.gene90983.t1 MTR_1g025420 61.847 249 92 3 5 252 4 250 1.95e-108 317
MS.gene90983.t1 MTR_5g022310 62.000 250 91 3 3 250 6 253 1.02e-107 315
MS.gene90983.t1 MTR_3g114030 63.636 231 82 2 19 248 1 230 2.30e-104 305
MS.gene90983.t1 MTR_8g075550 64.807 233 77 3 19 247 22 253 2.95e-104 308
MS.gene90983.t1 MTR_4g073720 55.510 245 99 4 5 247 3 239 7.87e-90 272
MS.gene90983.t1 MTR_5g022350 55.918 245 90 5 5 249 18 244 6.89e-88 266
MS.gene90983.t1 MTR_8g075510 53.846 247 98 6 3 248 13 244 6.08e-85 256
MS.gene90983.t1 MTR_8g075510 53.659 246 98 6 3 247 13 243 1.26e-83 255
MS.gene90983.t1 MTR_7g102380 52.489 221 100 4 29 248 25 241 1.04e-78 240
MS.gene90983.t1 MTR_2g067980 51.587 252 113 5 1 248 1 247 1.65e-78 259
MS.gene90983.t1 MTR_8g036215 52.321 237 108 4 11 247 6 237 1.93e-77 237
MS.gene90983.t1 MTR_2g068655 50.431 232 109 3 27 257 33 259 6.23e-77 238
MS.gene90983.t1 MTR_2g069660 50.000 246 114 5 5 248 5 243 7.03e-77 236
MS.gene90983.t1 MTR_6g079580 49.194 248 118 5 1 248 1 240 1.06e-75 233
MS.gene90983.t1 MTR_1g062590 49.372 239 114 5 11 248 10 242 5.65e-75 231
MS.gene90983.t1 MTR_1g062630 48.031 254 122 6 11 260 10 257 7.78e-74 228
MS.gene90983.t1 MTR_2g068030 48.918 231 112 4 19 247 17 243 9.12e-74 228
MS.gene90983.t1 MTR_1g021945 53.982 226 96 5 25 248 26 245 1.39e-72 225
MS.gene90983.t1 MTR_1g062660 48.945 237 115 5 14 248 10 242 2.25e-72 224
MS.gene90983.t1 MTR_1g062350 48.954 239 115 5 11 248 10 242 3.12e-72 224
MS.gene90983.t1 MTR_1g062370 48.536 239 116 5 11 248 10 242 5.08e-72 223
MS.gene90983.t1 MTR_8g107140 49.590 244 116 6 5 248 9 245 7.24e-70 218
MS.gene90983.t1 MTR_1g062340 49.321 221 107 4 29 248 26 242 2.82e-69 216
MS.gene90983.t1 MTR_3g111620 51.556 225 103 5 25 248 27 246 4.29e-68 213
MS.gene90983.t1 MTR_3g068015 42.105 247 136 5 4 248 7 248 1.23e-62 199
MS.gene90983.t1 MTR_7g062610 42.276 246 133 5 6 250 7 244 6.13e-61 195
MS.gene90983.t1 MTR_6g009480 44.130 247 131 6 5 248 10 252 1.04e-60 195
MS.gene90983.t1 MTR_5g059200 44.622 251 123 8 1 247 1 239 3.39e-59 192
MS.gene90983.t1 MTR_4g063630 39.749 239 138 6 12 247 16 251 9.56e-58 187
MS.gene90983.t1 MTR_1g062690 43.096 239 105 6 11 248 10 218 3.73e-57 184
MS.gene90983.t1 MTR_2g067990 47.162 229 89 10 22 248 24 222 1.07e-52 186
MS.gene90983.t1 MTR_5g023850 40.562 249 103 6 3 248 10 216 7.46e-52 171
MS.gene90983.t1 MTR_5g010635 41.485 229 108 8 23 249 22 226 1.30e-46 158
MS.gene90983.t1 MTR_5g022350 55.263 152 56 4 5 156 83 222 5.28e-46 155
MS.gene90983.t1 MTR_5g010640 38.710 248 122 9 9 248 11 236 1.08e-45 155
MS.gene90983.t1 MTR_8g096900 39.759 249 113 10 4 248 33 248 4.11e-45 154
MS.gene90983.t1 MTR_2g067970 45.405 185 92 6 68 248 3 182 7.81e-44 160
MS.gene90983.t1 MTR_2g063150 29.675 246 162 5 4 244 9 248 2.22e-34 126
MS.gene90983.t1 MTR_7g076360 32.883 222 83 4 23 244 6 161 5.08e-33 120
MS.gene90983.t1 MTR_1g062390 32.016 253 152 7 1 248 1 238 2.93e-31 118
MS.gene90983.t1 MTR_8g089020 45.926 135 66 3 109 243 32 159 4.18e-31 115
MS.gene90983.t1 MTR_8g096910 42.754 138 66 6 5 140 3 129 2.45e-27 105
MS.gene90983.t1 MTR_8g096920 44.203 138 66 6 6 142 1 128 9.32e-25 99.0
MS.gene90983.t1 MTR_3g081550 46.591 88 46 1 110 197 16 102 4.44e-18 79.0
MS.gene90983.t1 MTR_1g062640 40.964 83 48 1 84 166 65 146 7.73e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90983.t1 AT4G38670 73.239 284 68 6 1 281 2 280 2.13e-147 416
MS.gene90983.t1 AT4G38670 73.239 284 68 6 1 281 2 280 2.13e-147 416
MS.gene90983.t1 AT4G38670 74.060 266 64 4 19 281 1 264 6.89e-143 404
MS.gene90983.t1 AT1G75800 59.364 283 109 4 6 286 5 283 5.80e-114 333
MS.gene90983.t1 AT4G36010 65.000 240 76 3 22 255 20 257 3.90e-106 312
MS.gene90983.t1 AT4G36010 65.000 240 76 3 22 255 20 257 3.90e-106 312
MS.gene90983.t1 AT1G20030 63.136 236 85 2 22 255 17 252 2.51e-105 311
MS.gene90983.t1 AT2G17860 61.200 250 87 3 4 250 9 251 4.27e-105 308
MS.gene90983.t1 AT1G20030 63.793 232 82 2 26 255 4 235 7.80e-105 309
MS.gene90983.t1 AT4G24180 52.708 277 111 6 6 268 12 282 9.65e-92 276
MS.gene90983.t1 AT4G24180 52.727 275 109 6 6 268 12 277 1.06e-91 276
MS.gene90983.t1 AT4G24180 54.980 251 99 4 6 248 12 256 1.06e-90 271
MS.gene90983.t1 AT4G24180 55.020 249 97 4 6 248 12 251 1.14e-90 271
MS.gene90983.t1 AT4G38660 57.613 243 89 5 12 248 11 245 1.04e-87 267
MS.gene90983.t1 AT4G38660 59.375 224 83 3 25 248 8 223 1.60e-87 266
MS.gene90983.t1 AT5G38280 44.482 299 144 4 4 300 5 283 2.13e-84 268
MS.gene90983.t1 AT5G38280 44.482 299 144 4 4 300 5 283 3.87e-84 267
MS.gene90983.t1 AT4G24180 54.237 236 94 4 6 233 12 241 1.17e-81 251
MS.gene90983.t1 AT4G24180 54.274 234 92 4 6 233 12 236 1.67e-81 250
MS.gene90983.t1 AT5G24620 52.174 253 114 6 1 248 1 251 4.49e-81 252
MS.gene90983.t1 AT5G24620 52.174 253 114 6 1 248 56 306 1.02e-80 253
MS.gene90983.t1 AT5G24620 52.174 253 114 6 1 248 77 327 1.57e-80 253
MS.gene90983.t1 AT1G19320 51.837 245 106 6 8 247 9 246 2.73e-76 234
MS.gene90983.t1 AT1G75030 50.410 244 113 7 6 248 7 243 4.17e-75 231
MS.gene90983.t1 AT1G75050 50.206 243 115 6 6 248 7 243 1.56e-72 224
MS.gene90983.t1 AT1G75040 50.617 243 110 6 6 248 7 239 5.00e-72 223
MS.gene90983.t1 AT1G18250 48.472 229 113 4 20 248 16 239 1.76e-69 217
MS.gene90983.t1 AT1G18250 50.459 218 103 4 31 248 28 240 5.54e-69 216
MS.gene90983.t1 AT1G73620 49.561 228 110 5 21 248 38 260 2.43e-68 214
MS.gene90983.t1 AT1G77700 46.694 242 116 7 6 247 43 271 2.69e-63 203
MS.gene90983.t1 AT1G77700 46.694 242 116 7 6 247 43 271 3.61e-63 203
MS.gene90983.t1 AT2G28790 44.813 241 122 8 13 247 38 273 6.73e-62 198
MS.gene90983.t1 AT2G28790 44.813 241 122 8 13 247 13 248 8.20e-62 197
MS.gene90983.t1 AT1G77700 48.416 221 102 6 27 247 91 299 4.10e-61 199
MS.gene90983.t1 AT5G02140 42.169 249 137 4 9 256 7 249 1.27e-58 191
MS.gene90983.t1 AT5G02140 43.154 241 130 4 9 248 7 241 1.80e-58 189
MS.gene90983.t1 AT5G40020 42.041 245 137 4 5 248 8 248 3.52e-58 188
MS.gene90983.t1 AT4G36000 45.374 227 89 6 101 326 1 193 5.86e-57 183
MS.gene90983.t1 AT4G36000 45.374 227 89 6 101 326 1 193 5.86e-57 183
MS.gene90983.t1 AT4G18253 40.244 246 131 6 5 248 7 238 3.70e-56 182
MS.gene90983.t1 AT1G70250 42.795 229 118 7 26 248 146 367 1.97e-52 184
MS.gene90983.t1 AT4G18250 38.796 299 160 10 6 299 40 320 6.43e-49 174
MS.gene90983.t1 AT4G11650 40.000 245 121 8 5 248 4 223 1.64e-48 163
MS.gene90983.t1 AT5G24620 54.167 120 52 2 132 248 15 134 1.44e-37 136
MS.gene90983.t1 AT2G24810 58.667 75 31 0 173 247 118 192 2.04e-23 95.9

Find 96 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGACCCGACCAAGCTTTC+GGG 0.192121 4.2:-34856826 None:intergenic
AAGCTTGGTCGGGTCGAATA+TGG 0.205954 4.2:+34856831 MS.gene90983:CDS
GAGCCATAAACAGTGTTAAA+AGG 0.243154 4.2:-34859536 None:intergenic
GGTTGTCTTGTGGATCTTAA+TGG 0.253676 4.2:+34857616 MS.gene90983:CDS
GAGAGTTTGTACCTTGTATA+AGG 0.298064 4.2:-34857898 None:intergenic
ATTCGACCCGACCAAGCTTT+CGG 0.299164 4.2:-34856827 None:intergenic
AGAAGCGCGTGTGAGGCTTT+TGG 0.317232 4.2:+34857700 MS.gene90983:CDS
TGTTTATGGCTCACTTTGTA+TGG 0.329349 4.2:+34859547 MS.gene90983:CDS
CGCTAATGTTGCCGGAGGTT+TGG 0.332441 4.2:-34856948 None:intergenic
ACAAGTGCCGTTACACAATA+TGG 0.350341 4.2:+34856717 MS.gene90983:CDS
CTTACATTATCTTTCCTCTC+AGG 0.391595 4.2:+34856569 MS.gene90983:CDS
GTGAACTCCGCTAATGTTGC+CGG 0.404349 4.2:-34856956 None:intergenic
CGTGGGAATGGGAGTGGCAG+TGG 0.422771 4.2:+34857667 MS.gene90983:CDS
TTGAAGGTGGCGCGTGGGAA+TGG 0.425944 4.2:+34857655 MS.gene90983:CDS
GTGAATCCGGTGGTGGGTAG+CGG 0.426509 4.2:-34856770 None:intergenic
AAAGTAGCCTGCGCCGGTGG+TGG 0.426609 4.2:+34856923 MS.gene90983:CDS
TACTTGTCAAAACAACATTC+TGG 0.427034 4.2:+34859431 MS.gene90983:CDS
AGCTTGGTCGGGTCGAATAT+GGG 0.433087 4.2:+34856832 MS.gene90983:CDS
CAGTGTTAAAAGGGCATGAC+AGG 0.438064 4.2:-34859526 None:intergenic
GTGGCGCCGGAGAGTAATCC+TGG 0.438241 4.2:-34856740 None:intergenic
AGAGGTGGCTGCAGCGCTAC+TGG 0.439408 4.2:+34857595 MS.gene90983:CDS
ACCGGCGCAGGCTACTTTGC+CGG 0.441145 4.2:-34856918 None:intergenic
GGACTTCTATGACGTGAGTT+TGG 0.449006 4.2:+34857000 MS.gene90983:CDS
TTTGAGGGTGAATCCGGTGG+TGG 0.449715 4.2:-34856777 None:intergenic
CAACCCATCAGCTCCGTTCA+AGG 0.457843 4.2:-34856978 None:intergenic
CACAAGCTATAATCTGCGTT+TGG 0.458363 4.2:-34859478 None:intergenic
TGAAGGTGGCGCGTGGGAAT+GGG 0.462706 4.2:+34857656 MS.gene90983:CDS
GTGGCGCGTGGGAATGGGAG+TGG 0.468651 4.2:+34857661 MS.gene90983:CDS
CCCTCAAAAGTGGAAATTCA+AGG 0.472387 4.2:+34856792 MS.gene90983:CDS
TGGTTGTCCGGTGGATTTGA+AGG 0.475420 4.2:+34857639 MS.gene90983:CDS
TTCACCTTGAACGGAGCTGA+TGG 0.479580 4.2:+34856974 MS.gene90983:CDS
GGTGGGTAGCGGCGGTGAAG+TGG 0.480296 4.2:-34856759 None:intergenic
TCACTTTGTATGGACACTTC+AGG 0.483327 4.2:+34859557 MS.gene90983:CDS
GTGTTGGGAGCAAGGAAAGA+TGG 0.483447 4.2:+34859374 MS.gene90983:CDS
CGGTGGTGGTGCCAAACCTC+CGG 0.485749 4.2:+34856937 MS.gene90983:CDS
CGGAGGTTTGGCACCACCAC+CGG 0.488085 4.2:-34856936 None:intergenic
ATAGAAGGACCACACGTGTC+AGG 0.491976 4.2:-34857760 None:intergenic
CTGAGAGGAAAGATAATGTA+AGG 0.492145 4.2:-34856568 None:intergenic
AGCCATAAACAGTGTTAAAA+GGG 0.495668 4.2:-34859535 None:intergenic
CTATACAAATCCCGAAAGCT+TGG 0.496270 4.2:+34856816 MS.gene90983:CDS
ATCACCGCAGACTGTGGCTC+CGG 0.500430 4.2:+34856899 MS.gene90983:CDS
CAGCGCTACTGGTTGTCTTG+TGG 0.515275 4.2:+34857606 MS.gene90983:CDS
GGATCTTAATGGTGGTTGTC+CGG 0.517771 4.2:+34857627 MS.gene90983:CDS
ACCGGATTCACCCTCAAAAG+TGG 0.519297 4.2:+34856782 MS.gene90983:CDS
GTGGATTTGAAGGTGGCGCG+TGG 0.524437 4.2:+34857649 MS.gene90983:CDS
TGCCGTTACACAATATGGCC+AGG 0.524801 4.2:+34856722 MS.gene90983:CDS
AATCCGGTGGTGGGTAGCGG+CGG 0.527239 4.2:-34856767 None:intergenic
TTTGCCCCTTGCCTTATACA+AGG 0.531616 4.2:+34857887 MS.gene90983:CDS
TATGACGTGAGTTTGGTTGA+CGG 0.532680 4.2:+34857007 MS.gene90983:CDS
TGCTGATTGTGGCGAAAGGA+GGG 0.536940 4.2:+34857569 MS.gene90983:CDS
TTTGGCACCACCACCGGCGC+AGG 0.537590 4.2:-34856930 None:intergenic
TTGTACCTTGTATAAGGCAA+GGG 0.539123 4.2:-34857892 None:intergenic
TCCGGCAAAGTAGCCTGCGC+CGG 0.541271 4.2:+34856917 MS.gene90983:CDS
TGCGTGTAGAAGCGCGTGTG+AGG 0.544201 4.2:+34857693 MS.gene90983:CDS
GGAAGCACATGTGTAAGTAC+TGG 0.544486 4.2:-34857845 None:intergenic
CGCGCCACCTTCAAATCCAC+CGG 0.546086 4.2:-34857646 None:intergenic
ACAAATCCCGAAAGCTTGGT+CGG 0.551000 4.2:+34856820 MS.gene90983:CDS
TTAGCGGAGTTCACCTTGAA+CGG 0.552950 4.2:+34856965 MS.gene90983:CDS
CTTGAACGGAGCTGATGGGT+TGG 0.554103 4.2:+34856979 MS.gene90983:CDS
TAGCGGCGGTGAAGTGGCGC+CGG 0.556355 4.2:-34856753 None:intergenic
CAAATCCCGAAAGCTTGGTC+GGG 0.556414 4.2:+34856821 MS.gene90983:CDS
TAATATTCCGATGCTGATTG+TGG 0.561283 4.2:+34857558 MS.gene90983:CDS
ATGCTGATTGTGGCGAAAGG+AGG 0.563722 4.2:+34857568 MS.gene90983:CDS
CAAACCTCCGGCAACATTAG+CGG 0.565190 4.2:+34856949 MS.gene90983:CDS
TTTGTACCTTGTATAAGGCA+AGG 0.566917 4.2:-34857893 None:intergenic
GGCAAAGTAGCCTGCGCCGG+TGG 0.567472 4.2:+34856920 MS.gene90983:CDS
TCACCGCCGCTACCCACCAC+CGG 0.567829 4.2:+34856764 MS.gene90983:CDS
GCGAAAGGAGGGACGAGAGG+TGG 0.576149 4.2:+34857580 MS.gene90983:CDS
TCACCTTGAACGGAGCTGAT+GGG 0.579389 4.2:+34856975 MS.gene90983:CDS
TCTGGCGGTTCTTCATCGAA+AGG 0.589806 4.2:+34859449 MS.gene90983:CDS
ACGAAGATTGTTTACCTGAG+AGG 0.591768 4.2:-34856583 None:intergenic
TTGAGGGTGAATCCGGTGGT+GGG 0.595856 4.2:-34856776 None:intergenic
TGTCTTGTGGATCTTAATGG+TGG 0.605370 4.2:+34857619 MS.gene90983:CDS
ATATGGCCAGGATTACTCTC+CGG 0.607890 4.2:+34856734 MS.gene90983:CDS
AACTCCGCTAATGTTGCCGG+AGG 0.608625 4.2:-34856953 None:intergenic
TCTTAATGGTGGTTGTCCGG+TGG 0.609618 4.2:+34857630 MS.gene90983:CDS
TCATGTATCACCGCAGACTG+TGG 0.613074 4.2:+34856893 MS.gene90983:CDS
TACGCGTAGCTATAAGAGCG+TGG 0.613171 4.2:-34857811 None:intergenic
ACGCGTAGCTATAAGAGCGT+GGG 0.618064 4.2:-34857810 None:intergenic
CCTTTCGCCACAATCAGCAT+CGG 0.620311 4.2:-34857565 None:intergenic
TTGTGTTACCTCTATTGCTG+TGG 0.620710 4.2:+34859496 MS.gene90983:CDS
CCGATGCTGATTGTGGCGAA+AGG 0.629640 4.2:+34857565 MS.gene90983:CDS
AAACACGATCAAATAGTTAG+CGG 0.630534 4.2:-34857866 None:intergenic
TGGATTTGAAGGTGGCGCGT+GGG 0.631113 4.2:+34857650 MS.gene90983:CDS
TCTCTGCGGTCAAGACTCTG+AGG 0.631771 4.2:+34856862 MS.gene90983:CDS
TGTACCTTGTATAAGGCAAG+GGG 0.631956 4.2:-34857891 None:intergenic
TCCTCGCTATTGTTGTAGTG+AGG 0.634828 4.2:+34857726 MS.gene90983:CDS
ATCCTGGCCATATTGTGTAA+CGG 0.635375 4.2:-34856724 None:intergenic
GTGGCGAAAGGAGGGACGAG+AGG 0.637443 4.2:+34857577 MS.gene90983:CDS
TTGTCCGGTGGATTTGAAGG+TGG 0.644144 4.2:+34857642 MS.gene90983:CDS
TTTGCCGGAGCCACAGTCTG+CGG 0.644934 4.2:-34856903 None:intergenic
TATTCTACGCCTGACACGTG+TGG 0.659755 4.2:+34857751 MS.gene90983:CDS
CTCTGCGGTCAAGACTCTGA+GGG 0.675816 4.2:+34856863 MS.gene90983:CDS
ATATGGGCACGAACTCTCTG+CGG 0.685254 4.2:+34856848 MS.gene90983:CDS
TTGTCAAAACAACATTCTGG+CGG 0.691588 4.2:+34859434 MS.gene90983:CDS
TCCTCACTACAACAATAGCG+AGG 0.701705 4.2:-34857727 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAAAAGTGTTTAATA+TGG + chr4.2:34858908-34858927 MS.gene90983:intron 10.0%
!!! TATATTTTAATGTTATGTTA+GGG + chr4.2:34858873-34858892 MS.gene90983:intron 10.0%
!! AAATAAACATTAAACAAAAG+TGG - chr4.2:34858070-34858089 None:intergenic 15.0%
!! ATAATCAAAAGCTAAAAAAA+TGG - chr4.2:34857951-34857970 None:intergenic 15.0%
!! CTAACATAACATTAAAATAT+AGG - chr4.2:34858874-34858893 None:intergenic 15.0%
!!! CTATATTTTAATGTTATGTT+AGG + chr4.2:34858872-34858891 MS.gene90983:intron 15.0%
!!! TATTGTTATTATTGGTATAA+AGG + chr4.2:34857178-34857197 MS.gene90983:intron 15.0%
!!! TCTCAAAATATTGTTATTAT+TGG + chr4.2:34857170-34857189 MS.gene90983:intron 15.0%
!!! TTAAGCATATTTTATATATG+TGG - chr4.2:34859087-34859106 None:intergenic 15.0%
!! AAAATATAGGCATATTAATC+TGG - chr4.2:34858861-34858880 None:intergenic 20.0%
!! AGTCTCTAATTAAAATACAT+AGG - chr4.2:34858003-34858022 None:intergenic 20.0%
!! ATAATCCAATTATTAGCATA+TGG - chr4.2:34858404-34858423 None:intergenic 20.0%
!! ATGAATATATCTATAGTGAT+AGG + chr4.2:34858253-34858272 MS.gene90983:intron 20.0%
!! ATTTCATCAAATTTGAAGAA+AGG - chr4.2:34857209-34857228 None:intergenic 20.0%
!! TAAAATTGAATTTGAGAAAG+AGG - chr4.2:34858990-34859009 None:intergenic 20.0%
!!! AATCACATAAGACAATTTTT+TGG + chr4.2:34859237-34859256 MS.gene90983:intron 20.0%
!!! ACACTTTTATTTATTCAATG+TGG - chr4.2:34858902-34858921 None:intergenic 20.0%
!!! ATCACATAAGACAATTTTTT+GGG + chr4.2:34859238-34859257 MS.gene90983:intron 20.0%
!!! CAACTATTTTTCATAATTCA+AGG - chr4.2:34858659-34858678 None:intergenic 20.0%
!!! CACTTTTATTTATTCAATGT+GGG - chr4.2:34858901-34858920 None:intergenic 20.0%
! AAAATTTCTTTGTGCTTGAT+AGG + chr4.2:34857532-34857551 MS.gene90983:intron 25.0%
! AAGATATCTACTCGAATTAA+AGG + chr4.2:34858288-34858307 MS.gene90983:intron 25.0%
! AGAGTTACATTTGATTCAAT+TGG + chr4.2:34857396-34857415 MS.gene90983:intron 25.0%
! AGATATCTACTCGAATTAAA+GGG + chr4.2:34858289-34858308 MS.gene90983:intron 25.0%
! CACATATAAAAGACGATTTA+AGG - chr4.2:34859122-34859141 None:intergenic 25.0%
! CATTACAAGAAAAAACAACA+AGG - chr4.2:34859199-34859218 None:intergenic 25.0%
! CCATGACTAATATAAAATTG+CGG - chr4.2:34858790-34858809 None:intergenic 25.0%
! CTATAGTGATAGGAAAAAAA+CGG + chr4.2:34858263-34858282 MS.gene90983:intron 25.0%
! GAATTGTATCTATATAAGCA+CGG + chr4.2:34857067-34857086 MS.gene90983:intron 25.0%
! GTTATGGAAAAACATTTGTT+GGG + chr4.2:34858504-34858523 MS.gene90983:intron 25.0%
! TATTAGTCATGGGAAAAATA+TGG + chr4.2:34858798-34858817 MS.gene90983:intron 25.0%
! TCATAATTCAAGGTAGAAAA+TGG - chr4.2:34858649-34858668 None:intergenic 25.0%
! TGTTATGGAAAAACATTTGT+TGG + chr4.2:34858503-34858522 MS.gene90983:intron 25.0%
!! ACATTAAACAAAAGTGGATT+TGG - chr4.2:34858064-34858083 None:intergenic 25.0%
!! ATCAAGCACAAAGAAATTTT+AGG - chr4.2:34857532-34857551 None:intergenic 25.0%
!! CGCAATTTTATATTAGTCAT+GGG + chr4.2:34858788-34858807 MS.gene90983:intron 25.0%
!!! ATCATAGTTTTGTTTACAAG+AGG - chr4.2:34859410-34859429 None:intergenic 25.0%
!!! CTTGTTGTTTTTTCTTGTAA+TGG + chr4.2:34859197-34859216 MS.gene90983:intron 25.0%
!!! CTTTTTTGTTGCTAAATCAA+AGG - chr4.2:34858558-34858577 None:intergenic 25.0%
!!! TCACATAAGACAATTTTTTG+GGG + chr4.2:34859239-34859258 MS.gene90983:intron 25.0%
!!! TTGGATTATTTCTATCAACA+TGG + chr4.2:34858415-34858434 MS.gene90983:intron 25.0%
!!! TTTAACTTCACTTTGCTATT+TGG + chr4.2:34856646-34856665 MS.gene90983:intron 25.0%
AAAAAAGAGTCAGATAACGT+AGG + chr4.2:34858571-34858590 MS.gene90983:intron 30.0%
AAAAACAGCGAGTAAATAGA+AGG - chr4.2:34857778-34857797 None:intergenic 30.0%
AAACACGATCAAATAGTTAG+CGG - chr4.2:34857869-34857888 None:intergenic 30.0%
AAATATGGTCAGACCTAAAT+AGG + chr4.2:34858813-34858832 MS.gene90983:intron 30.0%
AAGCAAGTTTGGAAACTTAT+TGG - chr4.2:34859154-34859173 None:intergenic 30.0%
AATTCAATGTAATCACGTGT+TGG - chr4.2:34857141-34857160 None:intergenic 30.0%
AGCCATAAACAGTGTTAAAA+GGG - chr4.2:34859538-34859557 None:intergenic 30.0%
ATATGCTCCAATGAAATGAA+TGG + chr4.2:34858375-34858394 MS.gene90983:intron 30.0%
ATGGTAACCATTCATTTCAT+TGG - chr4.2:34858385-34858404 None:intergenic 30.0%
ATTAGAGACTATGATTGCTA+TGG + chr4.2:34858013-34858032 MS.gene90983:intron 30.0%
ATTTATGCATGTATCTTCTG+TGG + chr4.2:34859332-34859351 MS.gene90983:intron 30.0%
CATTTGATTCAATTGGAAAC+TGG + chr4.2:34857403-34857422 MS.gene90983:intron 30.0%
GATATCTACTCGAATTAAAG+GGG + chr4.2:34858290-34858309 MS.gene90983:intron 30.0%
GGGACATTTACATCTTTATT+AGG + chr4.2:34859259-34859278 MS.gene90983:intron 30.0%
GGTTACCATATGCTAATAAT+TGG + chr4.2:34858396-34858415 MS.gene90983:intron 30.0%
TACTTGTCAAAACAACATTC+TGG + chr4.2:34859431-34859450 MS.gene90983:CDS 30.0%
TATCTATATAAGCACGGATT+AGG + chr4.2:34857073-34857092 MS.gene90983:intron 30.0%
TCAGACCTAAATAGGTAAAA+TGG + chr4.2:34858821-34858840 MS.gene90983:intron 30.0%
TTAATCTGGTAATCTGCATT+TGG - chr4.2:34858847-34858866 None:intergenic 30.0%
TTAGATAACTCATTACCCAT+TGG + chr4.2:34857331-34857350 MS.gene90983:intron 30.0%
! AAAAACATTTGTTGGGAGTT+GGG + chr4.2:34858511-34858530 MS.gene90983:intron 30.0%
! ATTTAACTGCACATGTTTTG+TGG + chr4.2:34858086-34858105 MS.gene90983:intron 30.0%
! CCGCAATTTTATATTAGTCA+TGG + chr4.2:34858787-34858806 MS.gene90983:intron 30.0%
! CTTTGCTATCAAGTTAAGTA+AGG + chr4.2:34857308-34857327 MS.gene90983:intron 30.0%
! GAAAATGGTTTTTCTGTAGT+CGG - chr4.2:34858634-34858653 None:intergenic 30.0%
!! GAGTTGTTTTGTTAGAGTAA+GGG + chr4.2:34857975-34857994 MS.gene90983:intron 30.0%
!! TGAGTTGTTTTGTTAGAGTA+AGG + chr4.2:34857974-34857993 MS.gene90983:intron 30.0%
!! TTTGGCCATTTTACCTATTT+AGG - chr4.2:34858829-34858848 None:intergenic 30.0%
AACTCTGATGAAGCTTATGT+TGG - chr4.2:34857382-34857401 None:intergenic 35.0%
AACTTTGGACCAAATGGTTA+AGG - chr4.2:34858469-34858488 None:intergenic 35.0%
AATATGGTATCTAAGCCATG+AGG + chr4.2:34858924-34858943 MS.gene90983:intron 35.0%
ACCAGTCAATAATCGAACTT+TGG - chr4.2:34858484-34858503 None:intergenic 35.0%
ACTCTGATGAAGCTTATGTT+GGG - chr4.2:34857381-34857400 None:intergenic 35.0%
ACTTTGGACCAAATGGTTAA+GGG - chr4.2:34858468-34858487 None:intergenic 35.0%
ATAGGGCTTCTATGATGATA+TGG + chr4.2:34857438-34857457 MS.gene90983:intron 35.0%
CTGAGAGGAAAGATAATGTA+AGG - chr4.2:34856571-34856590 None:intergenic 35.0%
CTTACATTATCTTTCCTCTC+AGG + chr4.2:34856569-34856588 MS.gene90983:CDS 35.0%
GAGAGTTTGTACCTTGTATA+AGG - chr4.2:34857901-34857920 None:intergenic 35.0%
GAGCCATAAACAGTGTTAAA+AGG - chr4.2:34859539-34859558 None:intergenic 35.0%
GTACCTCTGAACATAATTCA+AGG - chr4.2:34856673-34856692 None:intergenic 35.0%
GTCTTATGTGATTTGAGTGA+GGG - chr4.2:34859230-34859249 None:intergenic 35.0%
TAATCGAACTTTGGACCAAA+TGG - chr4.2:34858475-34858494 None:intergenic 35.0%
TAGGGCTTCTATGATGATAT+GGG + chr4.2:34857439-34857458 MS.gene90983:intron 35.0%
TCCAAAGTTCGATTATTGAC+TGG + chr4.2:34858480-34858499 MS.gene90983:intron 35.0%
TGATTCAATTGGAAACTGGA+GGG + chr4.2:34857407-34857426 MS.gene90983:intron 35.0%
TGTCTTATGTGATTTGAGTG+AGG - chr4.2:34859231-34859250 None:intergenic 35.0%
TGTTTATGGCTCACTTTGTA+TGG + chr4.2:34859547-34859566 MS.gene90983:CDS 35.0%
TTGATTCAATTGGAAACTGG+AGG + chr4.2:34857406-34857425 MS.gene90983:intron 35.0%
TTGTACCTTGTATAAGGCAA+GGG - chr4.2:34857895-34857914 None:intergenic 35.0%
TTGTCAAAACAACATTCTGG+CGG + chr4.2:34859434-34859453 MS.gene90983:CDS 35.0%
TTTGTACCTTGTATAAGGCA+AGG - chr4.2:34857896-34857915 None:intergenic 35.0%
! GAAAAACATTTGTTGGGAGT+TGG + chr4.2:34858510-34858529 MS.gene90983:intron 35.0%
! TAATATTCCGATGCTGATTG+TGG + chr4.2:34857558-34857577 MS.gene90983:CDS 35.0%
! TACTCGAATTAAAGGGGTAT+TGG + chr4.2:34858296-34858315 MS.gene90983:intron 35.0%
! TCGATTATTGACTGGTGTTA+TGG + chr4.2:34858488-34858507 MS.gene90983:intron 35.0%
! TCTATGATGATATGGGGTTT+TGG + chr4.2:34857446-34857465 MS.gene90983:intron 35.0%
! TGCCCTTTTAACACTGTTTA+TGG + chr4.2:34859533-34859552 MS.gene90983:CDS 35.0%
!! AAAGGGGTATTGGTTGATTT+GGG + chr4.2:34858306-34858325 MS.gene90983:intron 35.0%
!! AATGCAGTTTGTTGACCAAT+GGG - chr4.2:34857349-34857368 None:intergenic 35.0%
!! CCTTGAATTTCCACTTTTGA+GGG - chr4.2:34856795-34856814 None:intergenic 35.0%
!! TAAAGGGGTATTGGTTGATT+TGG + chr4.2:34858305-34858324 MS.gene90983:intron 35.0%
!! TAATGCAGTTTGTTGACCAA+TGG - chr4.2:34857350-34857369 None:intergenic 35.0%
!! TCCTTGAATTTCCACTTTTG+AGG - chr4.2:34856796-34856815 None:intergenic 35.0%
!! TTATTTCTATCAACATGGCG+AGG + chr4.2:34858420-34858439 MS.gene90983:intron 35.0%
!!! GTTTTGTTTACAAGAGGAAG+TGG - chr4.2:34859404-34859423 None:intergenic 35.0%
AACTGGAGGGTTCTATCTAT+AGG + chr4.2:34857420-34857439 MS.gene90983:intron 40.0%
AATTGCGGAGAAGATACAAC+CGG - chr4.2:34858775-34858794 None:intergenic 40.0%
ACCACAAGGAAAAGCAAGTT+TGG - chr4.2:34859165-34859184 None:intergenic 40.0%
ACGAAGATTGTTTACCTGAG+AGG - chr4.2:34856586-34856605 None:intergenic 40.0%
ACTGGAGGGTTCTATCTATA+GGG + chr4.2:34857421-34857440 MS.gene90983:intron 40.0%
AGGAAAATCCAAACACCACA+AGG - chr4.2:34859179-34859198 None:intergenic 40.0%
AGGGCTTCTATGATGATATG+GGG + chr4.2:34857440-34857459 MS.gene90983:intron 40.0%
AGTTGAGTCCCTTAACCATT+TGG + chr4.2:34858457-34858476 MS.gene90983:intron 40.0%
ATCCTGGCCATATTGTGTAA+CGG - chr4.2:34856727-34856746 None:intergenic 40.0%
CACAAGCTATAATCTGCGTT+TGG - chr4.2:34859481-34859500 None:intergenic 40.0%
CCCTCAAAAGTGGAAATTCA+AGG + chr4.2:34856792-34856811 MS.gene90983:CDS 40.0%
CTATACAAATCCCGAAAGCT+TGG + chr4.2:34856816-34856835 MS.gene90983:CDS 40.0%
GGTCAACAAACTGCATTACT+AGG + chr4.2:34857352-34857371 MS.gene90983:intron 40.0%
GGTCCTTGAATTATGTTCAG+AGG + chr4.2:34856667-34856686 MS.gene90983:intron 40.0%
GGTTGTCTTGTGGATCTTAA+TGG + chr4.2:34857616-34857635 MS.gene90983:CDS 40.0%
TATGACGTGAGTTTGGTTGA+CGG + chr4.2:34857007-34857026 MS.gene90983:CDS 40.0%
TCACTTTGTATGGACACTTC+AGG + chr4.2:34859557-34859576 MS.gene90983:CDS 40.0%
TGATGTAAGCCCGTGTAATT+TGG - chr4.2:34858730-34858749 None:intergenic 40.0%
TGTACCTTGTATAAGGCAAG+GGG - chr4.2:34857894-34857913 None:intergenic 40.0%
TGTCTTGTGGATCTTAATGG+TGG + chr4.2:34857619-34857638 MS.gene90983:CDS 40.0%
TTGTGTTACCTCTATTGCTG+TGG + chr4.2:34859496-34859515 MS.gene90983:CDS 40.0%
! ACAAGTGCCGTTACACAATA+TGG + chr4.2:34856717-34856736 MS.gene90983:CDS 40.0%
! TTTGAGCAGCCAAAAAGTGT+TGG + chr4.2:34859358-34859377 MS.gene90983:intron 40.0%
!! ATTGGTTGATTTGGGCGATA+GGG + chr4.2:34858314-34858333 MS.gene90983:intron 40.0%
!! GTTTTTCTGTAGTCGGTGTT+CGG - chr4.2:34858627-34858646 None:intergenic 40.0%
!! TATTGGTTGATTTGGGCGAT+AGG + chr4.2:34858313-34858332 MS.gene90983:intron 40.0%
!! TCCAAACTTGCTTTTCCTTG+TGG + chr4.2:34859161-34859180 MS.gene90983:intron 40.0%
!! TGTCTGGTGTCATATACTTG+TGG + chr4.2:34857098-34857117 MS.gene90983:intron 40.0%
!! TTGAGCAGCCAAAAAGTGTT+GGG + chr4.2:34859359-34859378 MS.gene90983:intron 40.0%
!! TTGCTTTTCCTTGTGGTGTT+TGG + chr4.2:34859168-34859187 MS.gene90983:intron 40.0%
!!! ACACTTTTTGGCTGCTCAAA+AGG - chr4.2:34859358-34859377 None:intergenic 40.0%
ACAAATCCCGAAAGCTTGGT+CGG + chr4.2:34856820-34856839 MS.gene90983:CDS 45.0%
AGCTCAAGCCAGTTGTATGA+TGG + chr4.2:34858037-34858056 MS.gene90983:intron 45.0%
ATATGGCCAGGATTACTCTC+CGG + chr4.2:34856734-34856753 MS.gene90983:CDS 45.0%
ATTGCGGAGAAGATACAACC+GGG - chr4.2:34858774-34858793 None:intergenic 45.0%
CCTCACAGGTCCAAATTACA+CGG + chr4.2:34858717-34858736 MS.gene90983:intron 45.0%
CTCACAGGTCCAAATTACAC+GGG + chr4.2:34858718-34858737 MS.gene90983:intron 45.0%
GAAAAACGCCACAGCAATAG+AGG - chr4.2:34859507-34859526 None:intergenic 45.0%
GATTTGGCCCATCATACAAC+TGG - chr4.2:34858048-34858067 None:intergenic 45.0%
GCTCAAGCCAGTTGTATGAT+GGG + chr4.2:34858038-34858057 MS.gene90983:intron 45.0%
GGACTTCTATGACGTGAGTT+TGG + chr4.2:34857000-34857019 MS.gene90983:CDS 45.0%
GGATCTTAATGGTGGTTGTC+CGG + chr4.2:34857627-34857646 MS.gene90983:CDS 45.0%
TCCTCACTACAACAATAGCG+AGG - chr4.2:34857730-34857749 None:intergenic 45.0%
TCCTCGCTATTGTTGTAGTG+AGG + chr4.2:34857726-34857745 MS.gene90983:CDS 45.0%
TGGTTGACGGTAAGTGTGTT+CGG + chr4.2:34857020-34857039 MS.gene90983:intron 45.0%
TTAGCGGAGTTCACCTTGAA+CGG + chr4.2:34856965-34856984 MS.gene90983:CDS 45.0%
TTTGCCCCTTGCCTTATACA+AGG + chr4.2:34857887-34857906 MS.gene90983:CDS 45.0%
! ACTGCACATGTTTTGTGGAC+TGG + chr4.2:34858091-34858110 MS.gene90983:intron 45.0%
! CAGTGTTAAAAGGGCATGAC+AGG - chr4.2:34859529-34859548 None:intergenic 45.0%
! GGAAGCACATGTGTAAGTAC+TGG - chr4.2:34857848-34857867 None:intergenic 45.0%
! GTAATCACGTGTTGGTGTGT+TGG - chr4.2:34857133-34857152 None:intergenic 45.0%
! TCCTTGCTCCCAACACTTTT+TGG - chr4.2:34859370-34859389 None:intergenic 45.0%
!! TCCACTTTTGAGGGTGAATC+CGG - chr4.2:34856786-34856805 None:intergenic 45.0%
!! TGATATGGGGTTTTGGCATC+CGG + chr4.2:34857453-34857472 MS.gene90983:intron 45.0%
!! TTGGTTGATTTGGGCGATAG+GGG + chr4.2:34858315-34858334 MS.gene90983:intron 45.0%
AAGCTTGGTCGGGTCGAATA+TGG + chr4.2:34856831-34856850 MS.gene90983:CDS 50.0%
AATTTGGACCTGTGAGGCTG+TGG - chr4.2:34858714-34858733 None:intergenic 50.0%
ACCGGATTCACCCTCAAAAG+TGG + chr4.2:34856782-34856801 MS.gene90983:CDS 50.0%
AGCTTGGTCGGGTCGAATAT+GGG + chr4.2:34856832-34856851 MS.gene90983:CDS 50.0%
ATAGAAGGACCACACGTGTC+AGG - chr4.2:34857763-34857782 None:intergenic 50.0%
ATATGGGCACGAACTCTCTG+CGG + chr4.2:34856848-34856867 MS.gene90983:CDS 50.0%
ATTCGACCCGACCAAGCTTT+CGG - chr4.2:34856830-34856849 None:intergenic 50.0%
CAAACCTCCGGCAACATTAG+CGG + chr4.2:34856949-34856968 MS.gene90983:CDS 50.0%
CAAATCCCGAAAGCTTGGTC+GGG + chr4.2:34856821-34856840 MS.gene90983:CDS 50.0%
CCGTGTAATTTGGACCTGTG+AGG - chr4.2:34858720-34858739 None:intergenic 50.0%
CCTTTCGCCACAATCAGCAT+CGG - chr4.2:34857568-34857587 None:intergenic 50.0%
GTGAACTCCGCTAATGTTGC+CGG - chr4.2:34856959-34856978 None:intergenic 50.0%
GTGTTGGGAGCAAGGAAAGA+TGG + chr4.2:34859374-34859393 MS.gene90983:CDS 50.0%
TACGCGTAGCTATAAGAGCG+TGG - chr4.2:34857814-34857833 None:intergenic 50.0%
TATTCTACGCCTGACACGTG+TGG + chr4.2:34857751-34857770 MS.gene90983:CDS 50.0%
TCACCTTGAACGGAGCTGAT+GGG + chr4.2:34856975-34856994 MS.gene90983:CDS 50.0%
TCATGTATCACCGCAGACTG+TGG + chr4.2:34856893-34856912 MS.gene90983:CDS 50.0%
TCTGGCGGTTCTTCATCGAA+AGG + chr4.2:34859449-34859468 MS.gene90983:CDS 50.0%
TCTTAATGGTGGTTGTCCGG+TGG + chr4.2:34857630-34857649 MS.gene90983:CDS 50.0%
TGCCGTTACACAATATGGCC+AGG + chr4.2:34856722-34856741 MS.gene90983:CDS 50.0%
TTCACCTTGAACGGAGCTGA+TGG + chr4.2:34856974-34856993 MS.gene90983:CDS 50.0%
TTGCGGAGAAGATACAACCG+GGG - chr4.2:34858773-34858792 None:intergenic 50.0%
TTGGGAGAGGTCTTTGCAAG+AGG + chr4.2:34858529-34858548 MS.gene90983:intron 50.0%
! ACGCGTAGCTATAAGAGCGT+GGG - chr4.2:34857813-34857832 None:intergenic 50.0%
! ACGTGTTGGTGTGTTGGTGT+CGG - chr4.2:34857127-34857146 None:intergenic 50.0%
! ATGCTGATTGTGGCGAAAGG+AGG + chr4.2:34857568-34857587 MS.gene90983:CDS 50.0%
! CATTTGTTGGGAGTTGGGAG+AGG + chr4.2:34858516-34858535 MS.gene90983:intron 50.0%
! TGCTGATTGTGGCGAAAGGA+GGG + chr4.2:34857569-34857588 MS.gene90983:CDS 50.0%
! TGGTTGTCCGGTGGATTTGA+AGG + chr4.2:34857639-34857658 MS.gene90983:CDS 50.0%
! TGTAGTCGGTGTTCGGTCAA+TGG - chr4.2:34858620-34858639 None:intergenic 50.0%
! TTGTCCGGTGGATTTGAAGG+TGG + chr4.2:34857642-34857661 MS.gene90983:CDS 50.0%
! TTTTGTGAATACCCCTCCCC+CGG + chr4.2:34858753-34858772 MS.gene90983:intron 50.0%
!! AAGCACGGATTAGGCATGTC+TGG + chr4.2:34857082-34857101 MS.gene90983:intron 50.0%
!! ACTTTTGAGGGTGAATCCGG+TGG - chr4.2:34856783-34856802 None:intergenic 50.0%
!! GATATGGGGTTTTGGCATCC+GGG + chr4.2:34857454-34857473 MS.gene90983:intron 50.0%
!! GCCAAAAAGTGTTGGGAGCA+AGG + chr4.2:34859366-34859385 MS.gene90983:intron 50.0%
!!! AGGGGACTGGGAGCATTTTT+TGG + chr4.2:34858333-34858352 MS.gene90983:intron 50.0%
AACTCCGCTAATGTTGCCGG+AGG - chr4.2:34856956-34856975 None:intergenic 55.0%
AGAAGATACAACCGGGGGAG+GGG - chr4.2:34858767-34858786 None:intergenic 55.0%
CAACCCATCAGCTCCGTTCA+AGG - chr4.2:34856981-34857000 None:intergenic 55.0%
CACTACGTGGAAGAGCCTCA+TGG - chr4.2:34858942-34858961 None:intergenic 55.0%
CATGAGGCTCTTCCACGTAG+TGG + chr4.2:34858940-34858959 MS.gene90983:intron 55.0%
CGCTAATGTTGCCGGAGGTT+TGG - chr4.2:34856951-34856970 None:intergenic 55.0%
CTCTGCGGTCAAGACTCTGA+GGG + chr4.2:34856863-34856882 MS.gene90983:CDS 55.0%
GAGAAGATACAACCGGGGGA+GGG - chr4.2:34858768-34858787 None:intergenic 55.0%
GATTTGGGCGATAGGGGACT+GGG + chr4.2:34858321-34858340 MS.gene90983:intron 55.0%
TCAACATGGCGAGGCACAAG+TGG + chr4.2:34858429-34858448 MS.gene90983:intron 55.0%
TCTCTGCGGTCAAGACTCTG+AGG + chr4.2:34856862-34856881 MS.gene90983:CDS 55.0%
TGCGGAGAAGATACAACCGG+GGG - chr4.2:34858772-34858791 None:intergenic 55.0%
TGGATTTGAAGGTGGCGCGT+GGG + chr4.2:34857650-34857669 MS.gene90983:CDS 55.0%
TTCGACCCGACCAAGCTTTC+GGG - chr4.2:34856829-34856848 None:intergenic 55.0%
TTGAGGGTGAATCCGGTGGT+GGG - chr4.2:34856779-34856798 None:intergenic 55.0%
TTTGAGGGTGAATCCGGTGG+TGG - chr4.2:34856780-34856799 None:intergenic 55.0%
TTTGGCATCCGGGTCGTGTT+CGG + chr4.2:34857464-34857483 MS.gene90983:intron 55.0%
! AAGCGCGTGTGAGGCTTTTG+GGG + chr4.2:34857702-34857721 MS.gene90983:CDS 55.0%
! CAGCGCTACTGGTTGTCTTG+TGG + chr4.2:34857606-34857625 MS.gene90983:CDS 55.0%
! CCAGAGACTAGTCCACTACG+TGG - chr4.2:34858955-34858974 None:intergenic 55.0%
! CCGATGCTGATTGTGGCGAA+AGG + chr4.2:34857565-34857584 MS.gene90983:CDS 55.0%
! CTTGAACGGAGCTGATGGGT+TGG + chr4.2:34856979-34856998 MS.gene90983:CDS 55.0%
! GAAGCGCGTGTGAGGCTTTT+GGG + chr4.2:34857701-34857720 MS.gene90983:CDS 55.0%
! TGATTTGGGCGATAGGGGAC+TGG + chr4.2:34858320-34858339 MS.gene90983:intron 55.0%
!! AGAAGCGCGTGTGAGGCTTT+TGG + chr4.2:34857700-34857719 MS.gene90983:CDS 55.0%
!! CCACGTAGTGGACTAGTCTC+TGG + chr4.2:34858952-34858971 MS.gene90983:intron 55.0%
ATCACCGCAGACTGTGGCTC+CGG + chr4.2:34856899-34856918 MS.gene90983:CDS 60.0%
CGCGCCACCTTCAAATCCAC+CGG - chr4.2:34857649-34857668 None:intergenic 60.0%
GACACTGACCGAACACGACC+CGG - chr4.2:34857475-34857494 None:intergenic 60.0%
GGAGAAGATACAACCGGGGG+AGG - chr4.2:34858769-34858788 None:intergenic 60.0%
GTGGATTTGAAGGTGGCGCG+TGG + chr4.2:34857649-34857668 MS.gene90983:CDS 60.0%
TGAAGGTGGCGCGTGGGAAT+GGG + chr4.2:34857656-34857675 MS.gene90983:CDS 60.0%
TTGAAGGTGGCGCGTGGGAA+TGG + chr4.2:34857655-34857674 MS.gene90983:CDS 60.0%
TTTGCCGGAGCCACAGTCTG+CGG - chr4.2:34856906-34856925 None:intergenic 60.0%
! TGCGTGTAGAAGCGCGTGTG+AGG + chr4.2:34857693-34857712 MS.gene90983:CDS 60.0%
!! GTGAATCCGGTGGTGGGTAG+CGG - chr4.2:34856773-34856792 None:intergenic 60.0%
AGAGGTGGCTGCAGCGCTAC+TGG + chr4.2:34857595-34857614 MS.gene90983:CDS 65.0%
ATCCCCAGCCACAGCCTCAC+AGG + chr4.2:34858703-34858722 MS.gene90983:intron 65.0%
CGGAGGTTTGGCACCACCAC+CGG - chr4.2:34856939-34856958 None:intergenic 65.0%
CGTGGGAATGGGAGTGGCAG+TGG + chr4.2:34857667-34857686 MS.gene90983:CDS 65.0%
GACCTGTGAGGCTGTGGCTG+GGG - chr4.2:34858708-34858727 None:intergenic 65.0%
GCGAAAGGAGGGACGAGAGG+TGG + chr4.2:34857580-34857599 MS.gene90983:CDS 65.0%
GGACCTGTGAGGCTGTGGCT+GGG - chr4.2:34858709-34858728 None:intergenic 65.0%
GTGGCGAAAGGAGGGACGAG+AGG + chr4.2:34857577-34857596 MS.gene90983:CDS 65.0%
TCCGGCAAAGTAGCCTGCGC+CGG + chr4.2:34856917-34856936 MS.gene90983:CDS 65.0%
TGGACCTGTGAGGCTGTGGC+TGG - chr4.2:34858710-34858729 None:intergenic 65.0%
! AAAGTAGCCTGCGCCGGTGG+TGG + chr4.2:34856923-34856942 MS.gene90983:CDS 65.0%
! ACCGGCGCAGGCTACTTTGC+CGG - chr4.2:34856921-34856940 None:intergenic 65.0%
! CGGTGGTGGTGCCAAACCTC+CGG + chr4.2:34856937-34856956 MS.gene90983:CDS 65.0%
! GTGGCGCCGGAGAGTAATCC+TGG - chr4.2:34856743-34856762 None:intergenic 65.0%
!! AATCCGGTGGTGGGTAGCGG+CGG - chr4.2:34856770-34856789 None:intergenic 65.0%
GGCAAAGTAGCCTGCGCCGG+TGG + chr4.2:34856920-34856939 MS.gene90983:CDS 70.0%
GTGGCGCGTGGGAATGGGAG+TGG + chr4.2:34857661-34857680 MS.gene90983:CDS 70.0%
TAGCGGCGGTGAAGTGGCGC+CGG - chr4.2:34856756-34856775 None:intergenic 70.0%
TCACCGCCGCTACCCACCAC+CGG + chr4.2:34856764-34856783 MS.gene90983:CDS 70.0%
TTTGGCACCACCACCGGCGC+AGG - chr4.2:34856933-34856952 None:intergenic 70.0%
! GGTGGGTAGCGGCGGTGAAG+TGG - chr4.2:34856762-34856781 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 34856530 34859589 34856530 ID=MS.gene90983
chr4.2 mRNA 34856530 34859589 34856530 ID=MS.gene90983.t1;Parent=MS.gene90983
chr4.2 exon 34856530 34856590 34856530 ID=MS.gene90983.t1.exon1;Parent=MS.gene90983.t1
chr4.2 CDS 34856530 34856590 34856530 ID=cds.MS.gene90983.t1;Parent=MS.gene90983.t1
chr4.2 exon 34856687 34857028 34856687 ID=MS.gene90983.t1.exon2;Parent=MS.gene90983.t1
chr4.2 CDS 34856687 34857028 34856687 ID=cds.MS.gene90983.t1;Parent=MS.gene90983.t1
chr4.2 exon 34857554 34857908 34857554 ID=MS.gene90983.t1.exon3;Parent=MS.gene90983.t1
chr4.2 CDS 34857554 34857908 34857554 ID=cds.MS.gene90983.t1;Parent=MS.gene90983.t1
chr4.2 exon 34859367 34859589 34859367 ID=MS.gene90983.t1.exon4;Parent=MS.gene90983.t1
chr4.2 CDS 34859367 34859589 34859367 ID=cds.MS.gene90983.t1;Parent=MS.gene90983.t1
Gene Sequence

>MS.gene90983

ATGGGTCGATTTCTTCTCTTTCTCATTTTTCTCAGCTTCCTTACATTATCTTTCCTCTCAGGTAAACAATCTTCGTAAACTCTCAATTTTCAAAAATTGCACTTTAGTCTCTAAATTTTAACTTCACTTTGCTATTTGGTCCTTGAATTATGTTCAGAGGTACAAACAACGTCATTCAAGATTGTAAACAAGTGCCGTTACACAATATGGCCAGGATTACTCTCCGGCGCCACTTCACCGCCGCTACCCACCACCGGATTCACCCTCAAAAGTGGAAATTCAAGGACTATACAAATCCCGAAAGCTTGGTCGGGTCGAATATGGGCACGAACTCTCTGCGGTCAAGACTCTGAGGGAAAGTTTTCATGTATCACCGCAGACTGTGGCTCCGGCAAAGTAGCCTGCGCCGGTGGTGGTGCCAAACCTCCGGCAACATTAGCGGAGTTCACCTTGAACGGAGCTGATGGGTTGGACTTCTATGACGTGAGTTTGGTTGACGGTAAGTGTGTTCGGTGTCTAACACATGTCAGTATCATTGAATTGTATCTATATAAGCACGGATTAGGCATGTCTGGTGTCATATACTTGTGGTGTCCGACACCAACACACCAACACGTGATTACATTGAATTATTTTATTTTCTCAAAATATTGTTATTATTGGTATAAAGGTTTCACCTTTCTTCAAATTTGATGAAATAGTCAAGTTATTGTTCATTAGCTATATAATCATCTTTCTTTGAGTATTACTTACACTAGTCAAATGAACTATAGCAAGACTTTGCTATCAAGTTAAGTAAGGTTAGATAACTCATTACCCATTGGTCAACAAACTGCATTACTAGGATTCCCAACATAAGCTTCATCAGAGTTACATTTGATTCAATTGGAAACTGGAGGGTTCTATCTATAGGGCTTCTATGATGATATGGGGTTTTGGCATCCGGGTCGTGTTCGGTCAGTGTCTAAGTATGTTTTTATATAATTATTATATTGTTGTCCTAAAATTTCTTTGTGCTTGATAGGTTATAATATTCCGATGCTGATTGTGGCGAAAGGAGGGACGAGAGGTGGCTGCAGCGCTACTGGTTGTCTTGTGGATCTTAATGGTGGTTGTCCGGTGGATTTGAAGGTGGCGCGTGGGAATGGGAGTGGCAGTGGCGTTGCGTGTAGAAGCGCGTGTGAGGCTTTTGGGGATCCTCGCTATTGTTGTAGTGAGGAGTATTCTACGCCTGACACGTGTGGTCCTTCTATTTACTCGCTGTTTTTTAAACATGCTTGCCCACGCTCTTATAGCTACGCGTATGATGATAAGACCAGTACTTACACATGTGCTTCCGCTAACTATTTGATCGTGTTTTGCCCCTTGCCTTATACAAGGTACAAACTCTCTTGACTCTTTCATCATTAGCTTCATAACCATTTTTTTAGCTTTTGATTATGCATGAGTTGTTTTGTTAGAGTAAGGGCACCTATGTATTTTAATTAGAGACTATGATTGCTATGGAAGCTCAAGCCAGTTGTATGATGGGCCAAATCCACTTTTGTTTAATGTTTATTTAACTGCACATGTTTTGTGGACTGGAATTAAGAGTTGAGATATTCTTCATTTCACAGAAAACTCAAAAGAAATAGAGTTTCATTATAACATAGTTTTATGTTTATAAAGTCATATAAATATTTAATGTATGTCACATATTTTCAAAATGTATTTCTATATGAATATGAATATATCTATAGTGATAGGAAAAAAACGGAGAAGATATCTACTCGAATTAAAGGGGTATTGGTTGATTTGGGCGATAGGGGACTGGGAGCATTTTTTGGTGTTACTACTATTGTGTATATATGCTCCAATGAAATGAATGGTTACCATATGCTAATAATTGGATTATTTCTATCAACATGGCGAGGCACAAGTGGTAGATAGTTGAGTCCCTTAACCATTTGGTCCAAAGTTCGATTATTGACTGGTGTTATGGAAAAACATTTGTTGGGAGTTGGGAGAGGTCTTTGCAAGAGGATGCCTTTGATTTAGCAACAAAAAAGAGTCAGATAACGTAGGAAAAGAAGATTAGTTTTGTACGACCATTGACCGAACACCGACTACAGAAAAACCATTTTCTACCTTGAATTATGAAAAATAGTTGATTATTTGCATTCTAAGCAATGAAATCCCCAGCCACAGCCTCACAGGTCCAAATTACACGGGCTTACATCATACTTTTGTGAATACCCCTCCCCCGGTTGTATCTTCTCCGCAATTTTATATTAGTCATGGGAAAAATATGGTCAGACCTAAATAGGTAAAATGGCCAAATGCAGATTACCAGATTAATATGCCTATATTTTAATGTTATGTTAGGGATCCCACATTGAATAAATAAAAGTGTTTAATATGGTATCTAAGCCATGAGGCTCTTCCACGTAGTGGACTAGTCTCTGGAGCTGTTAGTAGCCTCTTTCTCAAATTCAATTTTATTGTCTAATCTCTCAAACATAAAAAATAAATATGAAATAAACTTGAAATATTTATTCATGTTCTGCACACGTATCCACATATATAAAATATGCTTAAAAAATATGCATGCCTTAAATCGTCTTTTATATGTGAGCTTTCTTCCAATAAGTTTCCAAACTTGCTTTTCCTTGTGGTGTTTGGATTTTCCTTGTTGTTTTTTCTTGTAATGGCAAACATCCCTCACTCAAATCACATAAGACAATTTTTTGGGGACATTTACATCTTTATTAGGTGAATATTTTGTGTACTTATTTTGAGTAGTTATTATAATTTATAGCATTAATTTATGCATGTATCTTCTGTGGCCTTTTGAGCAGCCAAAAAGTGTTGGGAGCAAGGAAAGATGGAGCACCACTTCCTCTTGTAAACAAAACTATGATGTACTTGTCAAAACAACATTCTGGCGGTTCTTCATCGAAAGGTCTGATCCAAACGCAGATTATAGCTTGTGTTACCTCTATTGCTGTGGCGTTTTTCCTGTCATGCCCTTTTAACACTGTTTATGGCTCACTTTGTATGGACACTTCAGGCAGAAAGTAA
Protein sequence

>MS.gene90983.t1

MGRFLLFLIFLSFLTLSFLSEVQTTSFKIVNKCRYTIWPGLLSGATSPPLPTTGFTLKSGNSRTIQIPKAWSGRIWARTLCGQDSEGKFSCITADCGSGKVACAGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNIPMLIVAKGGTRGGCSATGCLVDLNGGCPVDLKVARGNGSGSGVACRSACEAFGDPRYCCSEEYSTPDTCGPSIYSLFFKHACPRSYSYAYDDKTSTYTCASANYLIVFCPLPYTSQKVLGARKDGAPLPLVNKTMMYLSKQHSGGSSSKGLIQTQIIACVTSIAVAFFLSCPFNTVYGSLCMDTSGRK