Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93288.t1 | XP_013467511.1 | 97.6 | 287 | 5 | 1 | 1 | 287 | 1 | 285 | 2.20E-166 | 594.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93288.t1 | Q8LAS8 | 81.7 | 279 | 50 | 1 | 6 | 284 | 5 | 282 | 4.6e-136 | 485.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93288.t1 | A0A072VJD5 | 97.6 | 287 | 5 | 1 | 1 | 287 | 1 | 285 | 1.6e-166 | 594.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene93288 | -0.801324 | 9.50E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene93288 | 0.837022 | 6.64E-57 | -1.69E-46 |
| MS.gene049786 | MS.gene93288 | -0.806273 | 8.91E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene93288 | -0.814851 | 1.25E-51 | -1.69E-46 |
| MS.gene051848 | MS.gene93288 | 0.801638 | 8.19E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene93288 | -0.808088 | 3.68E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene93288 | -0.816566 | 5.18E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene93288 | -0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene93288 | -0.828737 | 7.61E-55 | -1.69E-46 |
| MS.gene052932 | MS.gene93288 | -0.821315 | 4.31E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene93288 | -0.839562 | 1.47E-57 | -1.69E-46 |
| MS.gene053340 | MS.gene93288 | -0.818557 | 1.84E-52 | -1.69E-46 |
| MS.gene053963 | MS.gene93288 | -0.817888 | 2.61E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene93288 | -0.87301 | 2.05E-67 | -1.69E-46 |
| MS.gene05469 | MS.gene93288 | -0.803796 | 2.94E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene93288 | -0.808417 | 3.13E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene93288 | -0.814384 | 1.58E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene93288 | -0.800993 | 1.11E-48 | -1.69E-46 |
| MS.gene056045 | MS.gene93288 | -0.828561 | 8.39E-55 | -1.69E-46 |
| MS.gene056403 | MS.gene93288 | -0.819596 | 1.07E-52 | -1.69E-46 |
| MS.gene056605 | MS.gene93288 | -0.804566 | 2.03E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene93288 | -0.801701 | 7.95E-49 | -1.69E-46 |
| MS.gene057055 | MS.gene93288 | -0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene057155 | MS.gene93288 | -0.840278 | 9.57E-58 | -1.69E-46 |
| MS.gene05781 | MS.gene93288 | -0.809967 | 1.46E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene93288 | 0.809112 | 2.22E-50 | -1.69E-46 |
| MS.gene058897 | MS.gene93288 | -0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene93288 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene059872 | MS.gene93288 | 0.810375 | 1.19E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene93288 | -0.80959 | 1.75E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene93288 | -0.804491 | 2.11E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene93288 | -0.807362 | 5.25E-50 | -1.69E-46 |
| MS.gene060852 | MS.gene93288 | -0.80621 | 9.19E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene93288 | -0.81976 | 9.81E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene93288 | -0.802438 | 5.61E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93288.t1 | MTR_1g052175 | 97.561 | 287 | 5 | 1 | 1 | 287 | 1 | 285 | 0.0 | 582 |
| MS.gene93288.t1 | MTR_4g008660 | 93.380 | 287 | 17 | 1 | 1 | 287 | 1 | 285 | 0.0 | 556 |
| MS.gene93288.t1 | MTR_1g052165 | 98.261 | 115 | 2 | 0 | 173 | 287 | 112 | 226 | 2.59e-81 | 245 |
| MS.gene93288.t1 | MTR_0931s0010 | 53.448 | 232 | 97 | 6 | 33 | 261 | 1 | 224 | 2.77e-77 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93288.t1 | AT2G41530 | 81.139 | 281 | 52 | 1 | 6 | 286 | 5 | 284 | 8.31e-174 | 481 |
Find 76 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCATTCCCAGTTCTTTAT+TGG | 0.126414 | 1.3:+33894024 | MS.gene93288:CDS |
| ACATCAAAAGCTTCCATATT+TGG | 0.166124 | 1.3:+33895121 | MS.gene93288:CDS |
| TTCCATATTTGGCCATTCTA+TGG | 0.197736 | 1.3:+33895132 | MS.gene93288:CDS |
| ACCCATAGAATGGCCAAATA+TGG | 0.309583 | 1.3:-33895134 | None:intergenic |
| TGGGAATGATTTGTTGTTGT+TGG | 0.369831 | 1.3:-33894012 | None:intergenic |
| CACAAGAGAAATGGAAGAAT+TGG | 0.373447 | 1.3:+33895032 | MS.gene93288:CDS |
| TGTCCCCAAGGACAATTTGT+AGG | 0.384046 | 1.3:-33897282 | None:intergenic |
| AAGCATCATGCTCAAGCTCT+TGG | 0.392695 | 1.3:+33897918 | MS.gene93288:CDS |
| AAAATACTTGGAGAGGTGTC+AGG | 0.400681 | 1.3:-33894137 | None:intergenic |
| GAAGCTGATTCCTGGGACTT+CGG | 0.418131 | 1.3:+33894304 | MS.gene93288:CDS |
| TCCATATTTGGCCATTCTAT+GGG | 0.418427 | 1.3:+33895133 | MS.gene93288:CDS |
| TTGAAGGTGAAGCTGATTCC+TGG | 0.423587 | 1.3:+33894296 | MS.gene93288:CDS |
| GAGAATTTCATCTTCAAATC+CGG | 0.426723 | 1.3:+33894071 | MS.gene93288:CDS |
| CAAATCCTACAAATTGTCCT+TGG | 0.427778 | 1.3:+33897277 | MS.gene93288:CDS |
| CCGGAGAGCCAATAAAGAAC+TGG | 0.433847 | 1.3:-33894032 | None:intergenic |
| CCAGTTCTTTATTGGCTCTC+CGG | 0.439382 | 1.3:+33894032 | MS.gene93288:CDS |
| TCAACGCTACACAAGAGAAA+TGG | 0.442687 | 1.3:+33895023 | MS.gene93288:CDS |
| GAAGGTGGCAATAAAATAGT+AGG | 0.446895 | 1.3:-33897880 | None:intergenic |
| GATCAAGGCAACACCGTGTT+CGG | 0.449404 | 1.3:-33894111 | None:intergenic |
| AAATCCTACAAATTGTCCTT+GGG | 0.449459 | 1.3:+33897278 | MS.gene93288:CDS |
| AGCATCATGCTCAAGCTCTT+GGG | 0.457494 | 1.3:+33897919 | MS.gene93288:CDS |
| TTCGAAGAGGCATGCAAGAA+TGG | 0.458293 | 1.3:+33897813 | MS.gene93288:CDS |
| GGATTATGATGCCACTTCTC+TGG | 0.459431 | 1.3:+33897430 | MS.gene93288:intron |
| GGCCATTCTATGGGTGGGCA+TGG | 0.466331 | 1.3:+33895142 | MS.gene93288:CDS |
| ATAGGAGGGTTGAATGTTGA+AGG | 0.469246 | 1.3:+33894280 | MS.gene93288:intron |
| TAGGTGGCAATAAATCTGAT+TGG | 0.471586 | 1.3:+33897325 | MS.gene93288:CDS |
| TTGTTGTTGGAATCTGAATT+CGG | 0.473838 | 1.3:-33893999 | None:intergenic |
| TACCTGATCAATCAAAATAG+TGG | 0.477898 | 1.3:-33897477 | None:intergenic |
| AAGTTATGACTTAGAAGCTC+TGG | 0.479312 | 1.3:-33895085 | None:intergenic |
| TTGAGTAGTGGGAAGATGTT+CGG | 0.481544 | 1.3:+33893906 | MS.gene93288:CDS |
| GGCAACACCGTGTTCGGAAG+CGG | 0.485549 | 1.3:-33894105 | None:intergenic |
| CTCATCGGTGCAAGTGAGGC+CGG | 0.489451 | 1.3:-33894051 | None:intergenic |
| AGGTGGCAATAAATCTGATT+GGG | 0.490259 | 1.3:+33897326 | MS.gene93288:CDS |
| AAGGCATTCACGAATTATCT+AGG | 0.493963 | 1.3:+33897306 | MS.gene93288:CDS |
| AAAATAGTGGCAGATACGTT+GGG | 0.499249 | 1.3:-33897464 | None:intergenic |
| CACCATGCCCACCCATAGAA+TGG | 0.501242 | 1.3:-33895144 | None:intergenic |
| AGAGGTGTCAGGGGCGATCA+AGG | 0.506465 | 1.3:-33894126 | None:intergenic |
| CAAAATAGTGGCAGATACGT+TGG | 0.508025 | 1.3:-33897465 | None:intergenic |
| CAACGTGCCGCTTCCGAACA+CGG | 0.512583 | 1.3:+33894098 | MS.gene93288:CDS |
| AGAGAAAGGAAGAAAATGGC+AGG | 0.518702 | 1.3:+33893867 | None:intergenic |
| AATGGCAGGAAGAGCAGTGA+CGG | 0.520773 | 1.3:+33893881 | None:intergenic |
| ATATTTGGCCATTCTATGGG+TGG | 0.524572 | 1.3:+33895136 | MS.gene93288:CDS |
| GATTCCTGGGACTTCGGTGT+TGG | 0.526402 | 1.3:+33894310 | MS.gene93288:CDS |
| CAATTTGTAGGATTTGCTAC+TGG | 0.532660 | 1.3:-33897270 | None:intergenic |
| GGAAGCGGCACGTTGAGCAC+CGG | 0.539249 | 1.3:-33894090 | None:intergenic |
| TATTTGGCCATTCTATGGGT+GGG | 0.539275 | 1.3:+33895137 | MS.gene93288:CDS |
| CAGTGACGGAGTTGAGTAGT+GGG | 0.540988 | 1.3:+33893895 | MS.gene93288:CDS |
| CTGCTGTTACGTCTTCAACC+TGG | 0.549069 | 1.3:+33897846 | MS.gene93288:CDS |
| AAATTGTCCTTGGGGACAGA+AGG | 0.550742 | 1.3:+33897287 | MS.gene93288:CDS |
| CGGAGAGCCAATAAAGAACT+GGG | 0.558893 | 1.3:-33894031 | None:intergenic |
| TATGATGCCACTTCTCTGGT+AGG | 0.559560 | 1.3:+33897434 | MS.gene93288:CDS |
| AAACATTACAGTAATACCCT+TGG | 0.564105 | 1.3:+33893948 | MS.gene93288:CDS |
| AAATACTTGGAGAGGTGTCA+GGG | 0.566124 | 1.3:-33894136 | None:intergenic |
| CATGCCTCTTCGAACTTGTG+AGG | 0.578352 | 1.3:-33897804 | None:intergenic |
| GCAGTGACGGAGTTGAGTAG+TGG | 0.583465 | 1.3:+33893894 | MS.gene93288:CDS |
| ATGATGCCACTTCTCTGGTA+GGG | 0.585746 | 1.3:+33897435 | MS.gene93288:CDS |
| AGGATTTGCTACTGGTGCAA+AGG | 0.588559 | 1.3:-33897262 | None:intergenic |
| CTTGATGTGATCATCAATGA+AGG | 0.594056 | 1.3:-33897898 | None:intergenic |
| CATGTATGACTATGTTGTCA+AGG | 0.598628 | 1.3:+33895057 | MS.gene93288:CDS |
| GAAAGTTCATTGAACAACCA+AGG | 0.601229 | 1.3:-33893965 | None:intergenic |
| TTTGAAGATGAAATTCTCAT+CGG | 0.604223 | 1.3:-33894066 | None:intergenic |
| CATACCAACACCGAAGTCCC+AGG | 0.604404 | 1.3:-33894314 | None:intergenic |
| TGAAGGTGAAGCTGATTCCT+GGG | 0.610524 | 1.3:+33894297 | MS.gene93288:CDS |
| AAAGTTCATTGAACAACCAA+GGG | 0.611862 | 1.3:-33893964 | None:intergenic |
| GTGAATGCCTTCTGTCCCCA+AGG | 0.620271 | 1.3:-33897294 | None:intergenic |
| TGGCAATAAATCTGATTGGG+AGG | 0.621181 | 1.3:+33897329 | MS.gene93288:CDS |
| ATACTTCCCTACCAGAGAAG+TGG | 0.628296 | 1.3:-33897441 | None:intergenic |
| TAGTAGGAGTGATCATAACC+AGG | 0.643074 | 1.3:-33897864 | None:intergenic |
| GGTTGAAGACGTAACAGCAG+TGG | 0.646823 | 1.3:-33897843 | None:intergenic |
| AATTCTCATCGGTGCAAGTG+AGG | 0.649677 | 1.3:-33894055 | None:intergenic |
| AGTAGTGGGAAGATGTTCGG+AGG | 0.665318 | 1.3:+33893909 | MS.gene93288:CDS |
| AATCCTACAAATTGTCCTTG+GGG | 0.667510 | 1.3:+33897279 | MS.gene93288:CDS |
| GTTGCCTCACAAGTTCGAAG+AGG | 0.678621 | 1.3:+33897800 | MS.gene93288:CDS |
| AATACTTGGAGAGGTGTCAG+GGG | 0.681882 | 1.3:-33894135 | None:intergenic |
| GATGTGATCATCAATGAAGG+TGG | 0.713561 | 1.3:-33897895 | None:intergenic |
| GCATTCACGAATTATCTAGG+TGG | 0.735202 | 1.3:+33897309 | MS.gene93288:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAAAAAGAGTTAA+TGG | + | chr1.3:33896117-33896136 | MS.gene93288:intron | 10.0% |
| !! | TTAAAAAAAAAAGAGTTAAT+GGG | + | chr1.3:33896118-33896137 | MS.gene93288:intron | 10.0% |
| !!! | CTTTTTTTTTTAATGAAAAT+TGG | - | chr1.3:33896111-33896130 | None:intergenic | 10.0% |
| !!! | TTAATTGCATATTTAATTTT+CGG | + | chr1.3:33894980-33894999 | MS.gene93288:intron | 10.0% |
| !!! | TTTTTTTTTAATGAAAATTG+GGG | - | chr1.3:33896109-33896128 | None:intergenic | 10.0% |
| !! | AAGAATAGAATAAAAATACT+TGG | - | chr1.3:33894152-33894171 | None:intergenic | 15.0% |
| !! | ACAATTTGAATAAATCAAAA+TGG | + | chr1.3:33897633-33897652 | MS.gene93288:intron | 15.0% |
| !! | TAAAAAAAAAAGAGTTAATG+GGG | + | chr1.3:33896119-33896138 | MS.gene93288:intron | 15.0% |
| !! | TATAATAAACCTAGTTATAT+GGG | - | chr1.3:33896520-33896539 | None:intergenic | 15.0% |
| !! | TTCAATTCAATTATTTCAAT+AGG | + | chr1.3:33894262-33894281 | MS.gene93288:intron | 15.0% |
| !!! | ATTCTAAAATATTAGTTGAT+AGG | + | chr1.3:33894409-33894428 | MS.gene93288:intron | 15.0% |
| !!! | GAAATTTTCATTAATTAAAG+TGG | - | chr1.3:33896080-33896099 | None:intergenic | 15.0% |
| !!! | TTTCCTTTTCAATTTTATTT+GGG | + | chr1.3:33895677-33895696 | MS.gene93288:intron | 15.0% |
| !!! | TTTTCCTTTTCAATTTTATT+TGG | + | chr1.3:33895676-33895695 | MS.gene93288:intron | 15.0% |
| !!! | TTTTTTTCCTATAAAAAACT+GGG | - | chr1.3:33894847-33894866 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCCTATAAAAAAC+TGG | - | chr1.3:33894848-33894867 | None:intergenic | 15.0% |
| !! | AAACCCAAATAAAATTGAAA+AGG | - | chr1.3:33895683-33895702 | None:intergenic | 20.0% |
| !! | AAGCAATGTTATAAAAACTA+TGG | + | chr1.3:33895259-33895278 | MS.gene93288:intron | 20.0% |
| !! | AATTATTGAAGTTCATCAAT+AGG | + | chr1.3:33896239-33896258 | MS.gene93288:intron | 20.0% |
| !! | AATTCAATTATTTCAATAGG+AGG | + | chr1.3:33894265-33894284 | MS.gene93288:intron | 20.0% |
| !! | ACTATCTTTCAATATTAGAT+AGG | - | chr1.3:33895554-33895573 | None:intergenic | 20.0% |
| !! | ATAGACTTAAATAAGTGATA+TGG | - | chr1.3:33894603-33894622 | None:intergenic | 20.0% |
| !! | ATGAATAAAATGAGACTATA+TGG | + | chr1.3:33895770-33895789 | MS.gene93288:intron | 20.0% |
| !! | ATTCAATTATTTCAATAGGA+GGG | + | chr1.3:33894266-33894285 | MS.gene93288:intron | 20.0% |
| !! | GAAAAATCTCGATAAATATA+AGG | + | chr1.3:33895183-33895202 | MS.gene93288:CDS | 20.0% |
| !! | GTATAATAAACCTAGTTATA+TGG | - | chr1.3:33896521-33896540 | None:intergenic | 20.0% |
| !! | TGAGTTAAAAATGAACATAT+CGG | + | chr1.3:33896979-33896998 | MS.gene93288:intron | 20.0% |
| !! | TTATATACTTTATCCGATTA+GGG | + | chr1.3:33895866-33895885 | MS.gene93288:intron | 20.0% |
| !! | TTGAATAAATCAAAATGGTA+GGG | + | chr1.3:33897638-33897657 | MS.gene93288:intron | 20.0% |
| !! | TTTATATACTTTATCCGATT+AGG | + | chr1.3:33895865-33895884 | MS.gene93288:intron | 20.0% |
| !! | TTTGAATAAATCAAAATGGT+AGG | + | chr1.3:33897637-33897656 | MS.gene93288:intron | 20.0% |
| !!! | AACCAAATTTCTCATTATTT+TGG | + | chr1.3:33897085-33897104 | MS.gene93288:intron | 20.0% |
| !!! | ACTTTTATTTTAATCGTGAA+CGG | + | chr1.3:33897526-33897545 | MS.gene93288:intron | 20.0% |
| !!! | ATAAGAAAACCAAACTTTTA+CGG | + | chr1.3:33894632-33894651 | MS.gene93288:intron | 20.0% |
| !!! | ATAAGTATTGTACTTCTTAT+TGG | + | chr1.3:33897178-33897197 | MS.gene93288:intron | 20.0% |
| !!! | ATAGTTTTTATAACATTGCT+TGG | - | chr1.3:33895260-33895279 | None:intergenic | 20.0% |
| !!! | TAAGTATTGTACTTCTTATT+GGG | + | chr1.3:33897179-33897198 | MS.gene93288:intron | 20.0% |
| !!! | TATATTTATCGAGATTTTTC+AGG | - | chr1.3:33895183-33895202 | None:intergenic | 20.0% |
| !!! | TTGTAGAATTAGTTTTGTTA+TGG | + | chr1.3:33894899-33894918 | MS.gene93288:intron | 20.0% |
| !!! | TTTTTTCCTATAAAAAACTG+GGG | - | chr1.3:33894846-33894865 | None:intergenic | 20.0% |
| ! | AAATGTAAGATGTTTATTGG+AGG | + | chr1.3:33895581-33895600 | MS.gene93288:intron | 25.0% |
| ! | AACTAGGTTTATTATACCTA+GGG | + | chr1.3:33896524-33896543 | MS.gene93288:intron | 25.0% |
| ! | AAGAAATCTCAAAATCTTAC+AGG | - | chr1.3:33897591-33897610 | None:intergenic | 25.0% |
| ! | AAGAGCAAAAATAAAGGTTT+GGG | + | chr1.3:33896918-33896937 | MS.gene93288:intron | 25.0% |
| ! | AATTAAGATATCTTCTGCAA+AGG | - | chr1.3:33894966-33894985 | None:intergenic | 25.0% |
| ! | ACGAAATGTAAGATGTTTAT+TGG | + | chr1.3:33895578-33895597 | MS.gene93288:intron | 25.0% |
| ! | AGAAATTAAAACAACTGCTA+AGG | - | chr1.3:33896664-33896683 | None:intergenic | 25.0% |
| ! | AGTTAAAAATGAACATATCG+GGG | + | chr1.3:33896981-33897000 | MS.gene93288:intron | 25.0% |
| ! | ATAAACATCTTACATTTCGT+AGG | - | chr1.3:33895578-33895597 | None:intergenic | 25.0% |
| ! | ATAAATTCAATTCTCACTTG+AGG | + | chr1.3:33895966-33895985 | MS.gene93288:intron | 25.0% |
| ! | ATTAATTAAAGTGGCACTAA+CGG | - | chr1.3:33896071-33896090 | None:intergenic | 25.0% |
| ! | ATTATACCATGGAATTCAAA+AGG | - | chr1.3:33896274-33896293 | None:intergenic | 25.0% |
| ! | CACCAAAATAATGAGAAATT+TGG | - | chr1.3:33897090-33897109 | None:intergenic | 25.0% |
| ! | CTTTCAATATTAGATAGGAA+AGG | - | chr1.3:33895549-33895568 | None:intergenic | 25.0% |
| ! | GAGTTAAAAATGAACATATC+GGG | + | chr1.3:33896980-33896999 | MS.gene93288:intron | 25.0% |
| ! | GATATAAAGAAAGAATTAGC+GGG | + | chr1.3:33895888-33895907 | MS.gene93288:intron | 25.0% |
| ! | GATGAAATAAAGAATGATTC+AGG | + | chr1.3:33896826-33896845 | MS.gene93288:intron | 25.0% |
| ! | GATTTCACATGTTTGTTTAA+AGG | + | chr1.3:33896305-33896324 | MS.gene93288:intron | 25.0% |
| ! | GGATATAAAGAAAGAATTAG+CGG | + | chr1.3:33895887-33895906 | MS.gene93288:intron | 25.0% |
| ! | TAAATGAAATCTCCTTATTC+AGG | - | chr1.3:33896710-33896729 | None:intergenic | 25.0% |
| ! | TAACTAGGTTTATTATACCT+AGG | + | chr1.3:33896523-33896542 | MS.gene93288:intron | 25.0% |
| ! | TAAGAGCAAAAATAAAGGTT+TGG | + | chr1.3:33896917-33896936 | MS.gene93288:intron | 25.0% |
| ! | TAGAATAAAAATACTTGGAG+AGG | - | chr1.3:33894147-33894166 | None:intergenic | 25.0% |
| ! | TCTTTCTTTATATCCCTAAT+CGG | - | chr1.3:33895882-33895901 | None:intergenic | 25.0% |
| ! | TTGTTTATTTGGATGTCAAA+TGG | + | chr1.3:33895651-33895670 | MS.gene93288:intron | 25.0% |
| ! | TTTGAAGATGAAATTCTCAT+CGG | - | chr1.3:33894069-33894088 | None:intergenic | 25.0% |
| !! | AACATCTATGACTTTTAAAC+AGG | - | chr1.3:33894879-33894898 | None:intergenic | 25.0% |
| !! | ATATTAAAACGAGAAGCTTT+TGG | - | chr1.3:33895213-33895232 | None:intergenic | 25.0% |
| !! | TATTAAAACGAGAAGCTTTT+GGG | - | chr1.3:33895212-33895231 | None:intergenic | 25.0% |
| !! | TTTTTAATGAAAATTGGGGA+AGG | - | chr1.3:33896105-33896124 | None:intergenic | 25.0% |
| !! | TTTTTCCTATAAAAAACTGG+GGG | - | chr1.3:33894845-33894864 | None:intergenic | 25.0% |
| !!! | GTATGTGTCTTTTGTTTATT+TGG | + | chr1.3:33895640-33895659 | MS.gene93288:intron | 25.0% |
| !!! | GTTTTAAATCCGTAAAAGTT+TGG | - | chr1.3:33894644-33894663 | None:intergenic | 25.0% |
| !!! | TTGTTTTAATTTCTTAGTCG+AGG | + | chr1.3:33896670-33896689 | MS.gene93288:intron | 25.0% |
| !!! | TTTTTTCCTTTTGAATTCCA+TGG | + | chr1.3:33896265-33896284 | MS.gene93288:intron | 25.0% |
| AAAAAGAGTTAATGGGGAAA+TGG | + | chr1.3:33896125-33896144 | MS.gene93288:intron | 30.0% | |
| AAACATTACAGTAATACCCT+TGG | + | chr1.3:33893948-33893967 | MS.gene93288:CDS | 30.0% | |
| AAAGTTCATTGAACAACCAA+GGG | - | chr1.3:33893967-33893986 | None:intergenic | 30.0% | |
| AAATCCTACAAATTGTCCTT+GGG | + | chr1.3:33897278-33897297 | MS.gene93288:CDS | 30.0% | |
| AATAAGCAGTTGAAAAATGC+AGG | + | chr1.3:33897409-33897428 | MS.gene93288:intron | 30.0% | |
| AATCATTCCCAGTTCTTTAT+TGG | + | chr1.3:33894024-33894043 | MS.gene93288:CDS | 30.0% | |
| AATGTATCTTGAACATCTCA+AGG | - | chr1.3:33894941-33894960 | None:intergenic | 30.0% | |
| ACATCAAAAGCTTCCATATT+TGG | + | chr1.3:33895121-33895140 | MS.gene93288:CDS | 30.0% | |
| AGAAGAAAGATAATAGGGAT+TGG | - | chr1.3:33896370-33896389 | None:intergenic | 30.0% | |
| AGAGCAAAAATAAAGGTTTG+GGG | + | chr1.3:33896919-33896938 | MS.gene93288:intron | 30.0% | |
| AGGTTTATTCCCATATAACT+AGG | + | chr1.3:33896508-33896527 | MS.gene93288:intron | 30.0% | |
| ATATAGGTGGATGTACTTAT+TGG | + | chr1.3:33896576-33896595 | MS.gene93288:intron | 30.0% | |
| ATGGCAAAAGGATAAAATTC+AGG | - | chr1.3:33894810-33894829 | None:intergenic | 30.0% | |
| CTAGAAATCTCAATTGTGTT+TGG | + | chr1.3:33895414-33895433 | MS.gene93288:intron | 30.0% | |
| GAAATATTCCATGATGCATT+TGG | + | chr1.3:33895445-33895464 | MS.gene93288:intron | 30.0% | |
| GAGAATTTCATCTTCAAATC+CGG | + | chr1.3:33894071-33894090 | MS.gene93288:CDS | 30.0% | |
| GCAATTCTTTATTCTAAGCT+AGG | + | chr1.3:33896395-33896414 | MS.gene93288:intron | 30.0% | |
| GTCACATTGATCAAATTTAC+TGG | - | chr1.3:33894508-33894527 | None:intergenic | 30.0% | |
| GTTAAAAATGAACATATCGG+GGG | + | chr1.3:33896982-33897001 | MS.gene93288:intron | 30.0% | |
| TAAGTACATCCACCTATATA+AGG | - | chr1.3:33896575-33896594 | None:intergenic | 30.0% | |
| TACCTGATCAATCAAAATAG+TGG | - | chr1.3:33897480-33897499 | None:intergenic | 30.0% | |
| TAGGAAAGGTTCAATGTAAA+AGG | - | chr1.3:33895535-33895554 | None:intergenic | 30.0% | |
| TCACAACAACAAAAAGAGAA+GGG | - | chr1.3:33894347-33894366 | None:intergenic | 30.0% | |
| TCACATGTTTGTTTAAAGGT+GGG | + | chr1.3:33896309-33896328 | MS.gene93288:intron | 30.0% | |
| TCGAGATTAATATAGAATGC+AGG | + | chr1.3:33894669-33894688 | MS.gene93288:intron | 30.0% | |
| TCTGCAGAAATCATACATTA+AGG | - | chr1.3:33896621-33896640 | None:intergenic | 30.0% | |
| TCTTTATTCTAAGCTAGGAT+AGG | + | chr1.3:33896400-33896419 | MS.gene93288:intron | 30.0% | |
| TGAAGATCATACTATGACAT+AGG | + | chr1.3:33894733-33894752 | MS.gene93288:intron | 30.0% | |
| TGACAATTGACAAATGACAA+AGG | - | chr1.3:33897156-33897175 | None:intergenic | 30.0% | |
| TGCAGAGAAGAAAGATAATA+GGG | - | chr1.3:33896375-33896394 | None:intergenic | 30.0% | |
| TGCGTACAACAAATTTAGTT+GGG | + | chr1.3:33896801-33896820 | MS.gene93288:intron | 30.0% | |
| TGTGGTAAATGTTCTTTGTA+AGG | + | chr1.3:33896213-33896232 | MS.gene93288:intron | 30.0% | |
| TTCACATGTTTGTTTAAAGG+TGG | + | chr1.3:33896308-33896327 | MS.gene93288:intron | 30.0% | |
| ! | ATTGATCAAATTTACTGGCT+TGG | - | chr1.3:33894503-33894522 | None:intergenic | 30.0% |
| ! | GAGAAAGAATTCAAGAGTAT+AGG | - | chr1.3:33897717-33897736 | None:intergenic | 30.0% |
| ! | GATAATTTGTGTTTGCAAGA+TGG | + | chr1.3:33896848-33896867 | MS.gene93288:intron | 30.0% |
| ! | GTTTTTGTACCTTATATAGG+TGG | + | chr1.3:33896563-33896582 | MS.gene93288:intron | 30.0% |
| ! | TTATTTGGGTTTCAGAAGTT+TGG | + | chr1.3:33895691-33895710 | MS.gene93288:intron | 30.0% |
| ! | TTGTTGTTGGAATCTGAATT+CGG | - | chr1.3:33894002-33894021 | None:intergenic | 30.0% |
| !! | ACCATTGCTCTGAATTTTTA+GGG | + | chr1.3:33897747-33897766 | MS.gene93288:intron | 30.0% |
| !! | CGTGTTTTTGTACCTTATAT+AGG | + | chr1.3:33896560-33896579 | MS.gene93288:intron | 30.0% |
| !! | GCATATTTAATTTTCGGAAC+AGG | + | chr1.3:33894986-33895005 | MS.gene93288:intron | 30.0% |
| !! | TACCATTGCTCTGAATTTTT+AGG | + | chr1.3:33897746-33897765 | MS.gene93288:intron | 30.0% |
| !! | TTGATCAAATTTACTGGCTT+GGG | - | chr1.3:33894502-33894521 | None:intergenic | 30.0% |
| !!! | ACCTTTATTTTTGCTCTTAC+TGG | - | chr1.3:33896916-33896935 | None:intergenic | 30.0% |
| AAAATAGTGGCAGATACGTT+GGG | - | chr1.3:33897467-33897486 | None:intergenic | 35.0% | |
| AACCCAGGAAGTAAATAACA+TGG | - | chr1.3:33894566-33894585 | None:intergenic | 35.0% | |
| AAGAAAGAATTAGCGGGAAA+TGG | + | chr1.3:33895894-33895913 | MS.gene93288:intron | 35.0% | |
| AAGTTATGACTTAGAAGCTC+TGG | - | chr1.3:33895088-33895107 | None:intergenic | 35.0% | |
| AATCCTACAAATTGTCCTTG+GGG | + | chr1.3:33897279-33897298 | MS.gene93288:CDS | 35.0% | |
| AATGAGACTATATGGCAGTA+AGG | + | chr1.3:33895778-33895797 | MS.gene93288:intron | 35.0% | |
| ACCCAGGAAGTAAATAACAT+GGG | - | chr1.3:33894565-33894584 | None:intergenic | 35.0% | |
| AGAGCATGAAATTGCAATCT+TGG | + | chr1.3:33896744-33896763 | MS.gene93288:intron | 35.0% | |
| AGGTGGCAATAAATCTGATT+GGG | + | chr1.3:33897326-33897345 | MS.gene93288:CDS | 35.0% | |
| AGTAAGGAAGTCACAAAACT+TGG | + | chr1.3:33895794-33895813 | MS.gene93288:intron | 35.0% | |
| ATGCTTCTGAATTGGAATTG+TGG | + | chr1.3:33896476-33896495 | MS.gene93288:intron | 35.0% | |
| ATGTGCATTCTATCAGTCAA+GGG | - | chr1.3:33895330-33895349 | None:intergenic | 35.0% | |
| CAAATCCTACAAATTGTCCT+TGG | + | chr1.3:33897277-33897296 | MS.gene93288:CDS | 35.0% | |
| CACAAGAGAAATGGAAGAAT+TGG | + | chr1.3:33895032-33895051 | MS.gene93288:CDS | 35.0% | |
| CATGTATGACTATGTTGTCA+AGG | + | chr1.3:33895057-33895076 | MS.gene93288:CDS | 35.0% | |
| CTAATACAAAGCATGGCAAA+AGG | - | chr1.3:33894822-33894841 | None:intergenic | 35.0% | |
| CTGCAGAGAAGAAAGATAAT+AGG | - | chr1.3:33896376-33896395 | None:intergenic | 35.0% | |
| CTGCGTACAACAAATTTAGT+TGG | + | chr1.3:33896800-33896819 | MS.gene93288:intron | 35.0% | |
| CTTGATGTGATCATCAATGA+AGG | - | chr1.3:33897901-33897920 | None:intergenic | 35.0% | |
| GAAAGTTCATTGAACAACCA+AGG | - | chr1.3:33893968-33893987 | None:intergenic | 35.0% | |
| GCCAGTAAGAGCAAAAATAA+AGG | + | chr1.3:33896912-33896931 | MS.gene93288:intron | 35.0% | |
| GTAAGGAAGTCACAAAACTT+GGG | + | chr1.3:33895795-33895814 | MS.gene93288:intron | 35.0% | |
| GTACAACAAATTTAGTTGGG+TGG | + | chr1.3:33896804-33896823 | MS.gene93288:intron | 35.0% | |
| GTACAGCAATCATTATACCA+TGG | - | chr1.3:33896285-33896304 | None:intergenic | 35.0% | |
| GTCACAACAACAAAAAGAGA+AGG | - | chr1.3:33894348-33894367 | None:intergenic | 35.0% | |
| TAGGTGGCAATAAATCTGAT+TGG | + | chr1.3:33897325-33897344 | MS.gene93288:CDS | 35.0% | |
| TATGTGCATTCTATCAGTCA+AGG | - | chr1.3:33895331-33895350 | None:intergenic | 35.0% | |
| TCACAGATCACCTAAAGAAA+TGG | - | chr1.3:33896443-33896462 | None:intergenic | 35.0% | |
| TCCATATTTGGCCATTCTAT+GGG | + | chr1.3:33895133-33895152 | MS.gene93288:CDS | 35.0% | |
| TCTATGCTAAAATCCTCTGT+TGG | + | chr1.3:33896173-33896192 | MS.gene93288:intron | 35.0% | |
| TGATAGAGATGCTTCTGAAT+TGG | + | chr1.3:33896468-33896487 | MS.gene93288:intron | 35.0% | |
| TGATTGGGAGGTAAATTAGA+GGG | + | chr1.3:33897341-33897360 | MS.gene93288:intron | 35.0% | |
| TGCATTTGGCATAAGAAATG+TGG | + | chr1.3:33895459-33895478 | MS.gene93288:intron | 35.0% | |
| TGTTTGTTTAAAGGTGGGTA+AGG | + | chr1.3:33896314-33896333 | MS.gene93288:intron | 35.0% | |
| TTAATGAAAATTGGGGAAGG+AGG | - | chr1.3:33896102-33896121 | None:intergenic | 35.0% | |
| TTCCATATTTGGCCATTCTA+TGG | + | chr1.3:33895132-33895151 | MS.gene93288:CDS | 35.0% | |
| TTCGGAACTTCCATTTCTTT+AGG | + | chr1.3:33896430-33896449 | MS.gene93288:intron | 35.0% | |
| TTCTTATGCCAAATGCATCA+TGG | - | chr1.3:33895456-33895475 | None:intergenic | 35.0% | |
| ! | AAGGCATTCACGAATTATCT+AGG | + | chr1.3:33897306-33897325 | MS.gene93288:CDS | 35.0% |
| ! | GATCTTCAGTTTTCACATCA+AGG | - | chr1.3:33894721-33894740 | None:intergenic | 35.0% |
| ! | TACTGAGTTGAAATCTCCTT+GGG | + | chr1.3:33896029-33896048 | MS.gene93288:intron | 35.0% |
| ! | TCCCATGTTATTTACTTCCT+GGG | + | chr1.3:33894561-33894580 | MS.gene93288:intron | 35.0% |
| ! | TTCCCATGTTATTTACTTCC+TGG | + | chr1.3:33894560-33894579 | MS.gene93288:intron | 35.0% |
| !! | AATGGATAAGTGTTGGGATT+TGG | + | chr1.3:33895912-33895931 | MS.gene93288:intron | 35.0% |
| !! | CAATTTGTAGGATTTGCTAC+TGG | - | chr1.3:33897273-33897292 | None:intergenic | 35.0% |
| !! | CATTGCTCTGAATTTTTAGG+GGG | + | chr1.3:33897749-33897768 | MS.gene93288:intron | 35.0% |
| !! | CCATTGCTCTGAATTTTTAG+GGG | + | chr1.3:33897748-33897767 | MS.gene93288:intron | 35.0% |
| !! | TGGGAATGATTTGTTGTTGT+TGG | - | chr1.3:33894015-33894034 | None:intergenic | 35.0% |
| !! | TTTAATTTTCGGAACAGGTG+CGG | + | chr1.3:33894991-33895010 | MS.gene93288:intron | 35.0% |
| !!! | ATTAGCCCCCAGTTTTTTAT+AGG | + | chr1.3:33894837-33894856 | MS.gene93288:intron | 35.0% |
| !!! | TGCCACTATTTTGATTGATC+AGG | + | chr1.3:33897475-33897494 | MS.gene93288:CDS | 35.0% |
| AAAATCCTCTGTTGGCATTC+AGG | + | chr1.3:33896181-33896200 | MS.gene93288:intron | 40.0% | |
| AAAATGAACATATCGGGGGA+AGG | + | chr1.3:33896986-33897005 | MS.gene93288:intron | 40.0% | |
| AAATCCTCTGTTGGCATTCA+GGG | + | chr1.3:33896182-33896201 | MS.gene93288:intron | 40.0% | |
| ACCCATAGAATGGCCAAATA+TGG | - | chr1.3:33895137-33895156 | None:intergenic | 40.0% | |
| ATAGGAGGGTTGAATGTTGA+AGG | + | chr1.3:33894280-33894299 | MS.gene93288:intron | 40.0% | |
| ATATTTGGCCATTCTATGGG+TGG | + | chr1.3:33895136-33895155 | MS.gene93288:CDS | 40.0% | |
| ATGGGGAAATGGTTAAGTAC+TGG | + | chr1.3:33896136-33896155 | MS.gene93288:intron | 40.0% | |
| CAAAATAGTGGCAGATACGT+TGG | - | chr1.3:33897468-33897487 | None:intergenic | 40.0% | |
| CCCCTAAAAATTCAGAGCAA+TGG | - | chr1.3:33897751-33897770 | None:intergenic | 40.0% | |
| CTCAGTACCATGAGATTACA+AGG | - | chr1.3:33896016-33896035 | None:intergenic | 40.0% | |
| CTGATTGGGAGGTAAATTAG+AGG | + | chr1.3:33897340-33897359 | MS.gene93288:intron | 40.0% | |
| GAAGATGAGAATGTTAAGGC+AGG | + | chr1.3:33896941-33896960 | MS.gene93288:intron | 40.0% | |
| GAGTTTGCCTTGTAATCTCA+TGG | + | chr1.3:33896006-33896025 | MS.gene93288:intron | 40.0% | |
| GATGTGATCATCAATGAAGG+TGG | - | chr1.3:33897898-33897917 | None:intergenic | 40.0% | |
| GATTGGGAGGTAAATTAGAG+GGG | + | chr1.3:33897342-33897361 | MS.gene93288:intron | 40.0% | |
| GCATTCACGAATTATCTAGG+TGG | + | chr1.3:33897309-33897328 | MS.gene93288:CDS | 40.0% | |
| GCTAGGATAGGACATTCATT+CGG | + | chr1.3:33896412-33896431 | MS.gene93288:intron | 40.0% | |
| TATTTGGCCATTCTATGGGT+GGG | + | chr1.3:33895137-33895156 | MS.gene93288:CDS | 40.0% | |
| TCAACGCTACACAAGAGAAA+TGG | + | chr1.3:33895023-33895042 | MS.gene93288:CDS | 40.0% | |
| TGGAATTGTGGTGCAACAAA+AGG | + | chr1.3:33896488-33896507 | MS.gene93288:intron | 40.0% | |
| TGGCAATAAATCTGATTGGG+AGG | + | chr1.3:33897329-33897348 | MS.gene93288:CDS | 40.0% | |
| TGGGGAAATGGTTAAGTACT+GGG | + | chr1.3:33896137-33896156 | MS.gene93288:intron | 40.0% | |
| TGGGGAAGATGAGAATGTTA+AGG | + | chr1.3:33896937-33896956 | MS.gene93288:intron | 40.0% | |
| TTAAAGGTGGGTAAGGACTT+GGG | + | chr1.3:33896321-33896340 | MS.gene93288:intron | 40.0% | |
| TTGCACCCAAAATCCAATCA+GGG | - | chr1.3:33895615-33895634 | None:intergenic | 40.0% | |
| TTTAAAGGTGGGTAAGGACT+TGG | + | chr1.3:33896320-33896339 | MS.gene93288:intron | 40.0% | |
| ! | ACGTTTCCCTGATTGGATTT+TGG | + | chr1.3:33895606-33895625 | MS.gene93288:intron | 40.0% |
| ! | ACTGAGTTGAAATCTCCTTG+GGG | + | chr1.3:33896030-33896049 | MS.gene93288:intron | 40.0% |
| ! | ATTGAGACTACGAAGTATCC+TGG | - | chr1.3:33895498-33895517 | None:intergenic | 40.0% |
| ! | CAATCTTGGTAACAATGTCC+TGG | + | chr1.3:33896758-33896777 | MS.gene93288:intron | 40.0% |
| ! | CGATTTTACAACAATCCCCA+AGG | - | chr1.3:33896048-33896067 | None:intergenic | 40.0% |
| ! | CGTTTCCCTGATTGGATTTT+GGG | + | chr1.3:33895607-33895626 | MS.gene93288:intron | 40.0% |
| ! | GTACTGAGTTGAAATCTCCT+TGG | + | chr1.3:33896028-33896047 | MS.gene93288:intron | 40.0% |
| ! | TTAATTTTCGGAACAGGTGC+GGG | + | chr1.3:33894992-33895011 | MS.gene93288:intron | 40.0% |
| ! | TTGAGTAGTGGGAAGATGTT+CGG | + | chr1.3:33893906-33893925 | MS.gene93288:CDS | 40.0% |
| !! | AAAATACTTGGAGAGGTGTC+AGG | - | chr1.3:33894140-33894159 | None:intergenic | 40.0% |
| !! | AAATACTTGGAGAGGTGTCA+GGG | - | chr1.3:33894139-33894158 | None:intergenic | 40.0% |
| !! | TGAGTAGAAGCACCTGAATA+AGG | + | chr1.3:33896695-33896714 | MS.gene93288:intron | 40.0% |
| AAATTGTCCTTGGGGACAGA+AGG | + | chr1.3:33897287-33897306 | MS.gene93288:CDS | 45.0% | |
| AAGCATCATGCTCAAGCTCT+TGG | + | chr1.3:33897918-33897937 | MS.gene93288:CDS | 45.0% | |
| AATCCTCTGTTGGCATTCAG+GGG | + | chr1.3:33896183-33896202 | MS.gene93288:intron | 45.0% | |
| AATGTCCTGGAGCTAATAGC+TGG | + | chr1.3:33896771-33896790 | MS.gene93288:intron | 45.0% | |
| AATTCTCATCGGTGCAAGTG+AGG | - | chr1.3:33894058-33894077 | None:intergenic | 45.0% | |
| AGCATCATGCTCAAGCTCTT+GGG | + | chr1.3:33897919-33897938 | MS.gene93288:CDS | 45.0% | |
| AGCGGGAAATGGATAAGTGT+TGG | + | chr1.3:33895905-33895924 | MS.gene93288:intron | 45.0% | |
| ATACTTCCCTACCAGAGAAG+TGG | - | chr1.3:33897444-33897463 | None:intergenic | 45.0% | |
| ATGTCCTGGAGCTAATAGCT+GGG | + | chr1.3:33896772-33896791 | MS.gene93288:intron | 45.0% | |
| CGGAGAGCCAATAAAGAACT+GGG | - | chr1.3:33894034-33894053 | None:intergenic | 45.0% | |
| CTTGCACCCAAAATCCAATC+AGG | - | chr1.3:33895616-33895635 | None:intergenic | 45.0% | |
| GAATGTTAAGGCAGGATGAG+TGG | + | chr1.3:33896949-33896968 | MS.gene93288:intron | 45.0% | |
| GCGGGAAATGGATAAGTGTT+GGG | + | chr1.3:33895906-33895925 | MS.gene93288:intron | 45.0% | |
| TGTCCCCAAGGACAATTTGT+AGG | - | chr1.3:33897285-33897304 | None:intergenic | 45.0% | |
| TGTGGTTTCAGAGAACTTCC+AGG | + | chr1.3:33895477-33895496 | MS.gene93288:intron | 45.0% | |
| ! | AAGGACTTGGGCTAGAATGT+TGG | + | chr1.3:33896333-33896352 | MS.gene93288:intron | 45.0% |
| ! | ATGATGCCACTTCTCTGGTA+GGG | + | chr1.3:33897435-33897454 | MS.gene93288:CDS | 45.0% |
| ! | GCTTTTGATGTGTCAAGCTG+TGG | - | chr1.3:33895112-33895131 | None:intergenic | 45.0% |
| ! | GGATTATGATGCCACTTCTC+TGG | + | chr1.3:33897430-33897449 | MS.gene93288:intron | 45.0% |
| ! | GGGGAAATGGTTAAGTACTG+GGG | + | chr1.3:33896138-33896157 | MS.gene93288:intron | 45.0% |
| ! | TATGATGCCACTTCTCTGGT+AGG | + | chr1.3:33897434-33897453 | MS.gene93288:CDS | 45.0% |
| ! | TGAAGGTGAAGCTGATTCCT+GGG | + | chr1.3:33894297-33894316 | MS.gene93288:CDS | 45.0% |
| ! | TTCGAAGAGGCATGCAAGAA+TGG | + | chr1.3:33897813-33897832 | MS.gene93288:CDS | 45.0% |
| ! | TTGAAGGTGAAGCTGATTCC+TGG | + | chr1.3:33894296-33894315 | MS.gene93288:CDS | 45.0% |
| !! | AATACTTGGAGAGGTGTCAG+GGG | - | chr1.3:33894138-33894157 | None:intergenic | 45.0% |
| !! | AGGATTTGCTACTGGTGCAA+AGG | - | chr1.3:33897265-33897284 | None:intergenic | 45.0% |
| !! | CCAGTTCTTTATTGGCTCTC+CGG | + | chr1.3:33894032-33894051 | MS.gene93288:CDS | 45.0% |
| !! | TTCAATGCTCAGAGCATTGC+AGG | - | chr1.3:33896890-33896909 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTAATGAAAATT+GGG | - | chr1.3:33896110-33896129 | None:intergenic | 5.0% |
| AATCCCCAGCTATTAGCTCC+AGG | - | chr1.3:33896779-33896798 | None:intergenic | 50.0% | |
| ACGAACTTGATGTCGACCCT+AGG | - | chr1.3:33896543-33896562 | None:intergenic | 50.0% | |
| CATGCCTCTTCGAACTTGTG+AGG | - | chr1.3:33897807-33897826 | None:intergenic | 50.0% | |
| CCGGAGAGCCAATAAAGAAC+TGG | - | chr1.3:33894035-33894054 | None:intergenic | 50.0% | |
| CTGCTGTTACGTCTTCAACC+TGG | + | chr1.3:33897846-33897865 | MS.gene93288:CDS | 50.0% | |
| CTGGGGGCTAATACAAAGCA+TGG | - | chr1.3:33894829-33894848 | None:intergenic | 50.0% | |
| GATCAAGGCAACACCGTGTT+CGG | - | chr1.3:33894114-33894133 | None:intergenic | 50.0% | |
| GCATTCAGGGGACATATGTG+TGG | + | chr1.3:33896195-33896214 | MS.gene93288:intron | 50.0% | |
| GGAGGTAACGTTTCCCTGAT+TGG | + | chr1.3:33895599-33895618 | MS.gene93288:intron | 50.0% | |
| GGTTGAAGACGTAACAGCAG+TGG | - | chr1.3:33897846-33897865 | None:intergenic | 50.0% | |
| GTCAATGAGCAGTGAAACCC+AGG | - | chr1.3:33894581-33894600 | None:intergenic | 50.0% | |
| GTTGCCTCACAAGTTCGAAG+AGG | + | chr1.3:33897800-33897819 | MS.gene93288:CDS | 50.0% | |
| TGAACATATCGGGGGAAGGT+TGG | + | chr1.3:33896990-33897009 | MS.gene93288:intron | 50.0% | |
| TGTCCTGGAGCTAATAGCTG+GGG | + | chr1.3:33896773-33896792 | MS.gene93288:intron | 50.0% | |
| ! | AGTAGTGGGAAGATGTTCGG+AGG | + | chr1.3:33893909-33893928 | MS.gene93288:CDS | 50.0% |
| ! | CAGTGACGGAGTTGAGTAGT+GGG | + | chr1.3:33893895-33893914 | MS.gene93288:CDS | 50.0% |
| ! | GAAGCTGATTCCTGGGACTT+CGG | + | chr1.3:33894304-33894323 | MS.gene93288:CDS | 50.0% |
| CACCATGCCCACCCATAGAA+TGG | - | chr1.3:33895147-33895166 | None:intergenic | 55.0% | |
| CATACCAACACCGAAGTCCC+AGG | - | chr1.3:33894317-33894336 | None:intergenic | 55.0% | |
| GTGAATGCCTTCTGTCCCCA+AGG | - | chr1.3:33897297-33897316 | None:intergenic | 55.0% | |
| TGTCCCCTGAATGCCAACAG+AGG | - | chr1.3:33896189-33896208 | None:intergenic | 55.0% | |
| ! | GATTCCTGGGACTTCGGTGT+TGG | + | chr1.3:33894310-33894329 | MS.gene93288:CDS | 55.0% |
| ! | GCAGTGACGGAGTTGAGTAG+TGG | + | chr1.3:33893894-33893913 | MS.gene93288:CDS | 55.0% |
| CTCATCGGTGCAAGTGAGGC+CGG | - | chr1.3:33894054-33894073 | None:intergenic | 60.0% | |
| GGCAACACCGTGTTCGGAAG+CGG | - | chr1.3:33894108-33894127 | None:intergenic | 60.0% | |
| GGCCATTCTATGGGTGGGCA+TGG | + | chr1.3:33895142-33895161 | MS.gene93288:CDS | 60.0% | |
| !! | AGAGGTGTCAGGGGCGATCA+AGG | - | chr1.3:33894129-33894148 | None:intergenic | 60.0% |
| !! | CAACGTGCCGCTTCCGAACA+CGG | + | chr1.3:33894098-33894117 | MS.gene93288:CDS | 60.0% |
| GGAAGCGGCACGTTGAGCAC+CGG | - | chr1.3:33894093-33894112 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 33893882 | 33897950 | 33893882 | ID=MS.gene93288 |
| chr1.3 | mRNA | 33893882 | 33897950 | 33893882 | ID=MS.gene93288.t1;Parent=MS.gene93288 |
| chr1.3 | exon | 33893882 | 33894152 | 33893882 | ID=MS.gene93288.t1.exon1;Parent=MS.gene93288.t1 |
| chr1.3 | CDS | 33893882 | 33894152 | 33893882 | ID=cds.MS.gene93288.t1;Parent=MS.gene93288.t1 |
| chr1.3 | exon | 33894284 | 33894331 | 33894284 | ID=MS.gene93288.t1.exon2;Parent=MS.gene93288.t1 |
| chr1.3 | CDS | 33894284 | 33894331 | 33894284 | ID=cds.MS.gene93288.t1;Parent=MS.gene93288.t1 |
| chr1.3 | exon | 33895008 | 33895204 | 33895008 | ID=MS.gene93288.t1.exon3;Parent=MS.gene93288.t1 |
| chr1.3 | CDS | 33895008 | 33895204 | 33895008 | ID=cds.MS.gene93288.t1;Parent=MS.gene93288.t1 |
| chr1.3 | exon | 33897252 | 33897350 | 33897252 | ID=MS.gene93288.t1.exon4;Parent=MS.gene93288.t1 |
| chr1.3 | CDS | 33897252 | 33897350 | 33897252 | ID=cds.MS.gene93288.t1;Parent=MS.gene93288.t1 |
| chr1.3 | exon | 33897431 | 33897496 | 33897431 | ID=MS.gene93288.t1.exon5;Parent=MS.gene93288.t1 |
| chr1.3 | CDS | 33897431 | 33897496 | 33897431 | ID=cds.MS.gene93288.t1;Parent=MS.gene93288.t1 |
| chr1.3 | exon | 33897768 | 33897950 | 33897768 | ID=MS.gene93288.t1.exon6;Parent=MS.gene93288.t1 |
| chr1.3 | CDS | 33897768 | 33897950 | 33897768 | ID=cds.MS.gene93288.t1;Parent=MS.gene93288.t1 |
| Gene Sequence |
| Protein sequence |
