Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96598.t1 | XP_013456645.1 | 90 | 811 | 81 | 0 | 1 | 811 | 9 | 819 | 3.40E-194 | 688.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96598.t1 | Q9M8T5 | 45.3 | 782 | 392 | 10 | 9 | 788 | 16 | 763 | 2.1e-43 | 179.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96598.t1 | A0A072UMR5 | 90.0 | 811 | 81 | 0 | 1 | 811 | 9 | 819 | 2.4e-194 | 688.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049178 | MS.gene96598 | 0.815527 | 8.83E-52 | -1.69E-46 |
| MS.gene050376 | MS.gene96598 | 0.814218 | 1.72E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene96598 | 0.806796 | 6.91E-50 | -1.69E-46 |
| MS.gene050629 | MS.gene96598 | -0.829795 | 4.21E-55 | -1.69E-46 |
| MS.gene050657 | MS.gene96598 | 0.829608 | 4.68E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene96598 | 0.811594 | 6.48E-51 | -1.69E-46 |
| MS.gene050721 | MS.gene96598 | 0.810369 | 1.19E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene96598 | 0.801178 | 1.02E-48 | -1.69E-46 |
| MS.gene050787 | MS.gene96598 | 0.802689 | 4.98E-49 | -1.69E-46 |
| MS.gene051790 | MS.gene96598 | 0.809978 | 1.45E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene96598 | 0.822534 | 2.25E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene96598 | 0.80215 | 6.43E-49 | -1.69E-46 |
| MS.gene053164 | MS.gene96598 | 0.806418 | 8.31E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene96598 | 0.812896 | 3.37E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene96598 | 0.822343 | 2.49E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene96598 | 0.821932 | 3.10E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene96598 | 0.806416 | 8.31E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene96598 | 0.810313 | 1.23E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene96598 | 0.832217 | 1.07E-55 | -1.69E-46 |
| MS.gene055861 | MS.gene96598 | -0.848472 | 6.00E-60 | -1.69E-46 |
| MS.gene055864 | MS.gene96598 | 0.812113 | 4.99E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene96598 | 0.802092 | 6.61E-49 | -1.69E-46 |
| MS.gene058543 | MS.gene96598 | 0.820132 | 8.06E-53 | -1.69E-46 |
| MS.gene059664 | MS.gene96598 | 0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene96598 | 0.834985 | 2.18E-56 | -1.69E-46 |
| MS.gene059725 | MS.gene96598 | 0.813442 | 2.55E-51 | -1.69E-46 |
| MS.gene060122 | MS.gene96598 | -0.824091 | 9.74E-54 | -1.69E-46 |
| MS.gene060125 | MS.gene96598 | -0.819777 | 9.72E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene96598 | 0.814156 | 1.78E-51 | -1.69E-46 |
| MS.gene060373 | MS.gene96598 | 0.802536 | 5.36E-49 | -1.69E-46 |
| MS.gene060380 | MS.gene96598 | 0.80517 | 1.52E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene96598 | 0.850393 | 1.75E-60 | -1.69E-46 |
| MS.gene060637 | MS.gene96598 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene96598 | 0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene060869 | MS.gene96598 | 0.806992 | 6.28E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 156 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATGTTGTTTCTATTTC+TGG | 0.107855 | 4.4:+32505017 | None:intergenic |
| AAAGCTTTGCTTGGAAAATT+TGG | 0.148163 | 4.4:-32505070 | MS.gene96598:CDS |
| TTCATGCTCAGTGTGATTTC+TGG | 0.166546 | 4.4:+32505600 | None:intergenic |
| CTGCTTTCAACTTCAATATA+AGG | 0.227623 | 4.4:+32506808 | None:intergenic |
| TCAGAAAATTCAACGACTTT+AGG | 0.228754 | 4.4:+32505535 | None:intergenic |
| GATTTGAAGTTAGTCTTAAA+AGG | 0.240438 | 4.4:-32506096 | MS.gene96598:CDS |
| TTGCTAACTTTACTTACTTT+TGG | 0.242464 | 4.4:+32508552 | None:intergenic |
| TCAATGAATTGGAGAATTCT+AGG | 0.267794 | 4.4:-32506257 | MS.gene96598:CDS |
| GAGAGCTTTGATAAGATAAA+TGG | 0.293654 | 4.4:-32505175 | MS.gene96598:CDS |
| GAGTTGCACGATTGAGAAAA+AGG | 0.311057 | 4.4:-32505287 | MS.gene96598:CDS |
| CCTTCTCCTTCTCAGCTTGA+AGG | 0.311769 | 4.4:+32507267 | None:intergenic |
| TTCAGAACGCCGTCTTCTTA+TGG | 0.322768 | 4.4:-32506430 | MS.gene96598:CDS |
| TCTTTGCTCTCATCTTCCTT+TGG | 0.336435 | 4.4:+32505349 | None:intergenic |
| GAAGAGAATGGTCATGGATA+TGG | 0.341434 | 4.4:-32505514 | MS.gene96598:CDS |
| GTTGCTTAGAAAATTCTCTT+TGG | 0.347577 | 4.4:+32506155 | None:intergenic |
| TCTGAACCCTTTGCAGCTCT+TGG | 0.352340 | 4.4:+32507347 | None:intergenic |
| AAACAAACTCATCAATGAAT+TGG | 0.355092 | 4.4:-32506268 | MS.gene96598:CDS |
| AATCACACTGAGCATGAAAA+TGG | 0.356757 | 4.4:-32505595 | MS.gene96598:CDS |
| CTGAGCTTCTTCGTCCCTAT+TGG | 0.359876 | 4.4:+32505840 | None:intergenic |
| GGAGGAGTTGTCAAAGTTAC+TGG | 0.363861 | 4.4:-32505635 | MS.gene96598:CDS |
| AAAATTCCGAGCTGTTGAAT+TGG | 0.372773 | 4.4:-32507132 | MS.gene96598:CDS |
| TGGCGACTCAGATGCTGATT+TGG | 0.373526 | 4.4:+32508521 | None:intergenic |
| CTCCACCTTCTTAATAGATT+CGG | 0.374470 | 4.4:+32505654 | None:intergenic |
| AGGGAAAGCTCAACAACCTT+TGG | 0.390841 | 4.4:+32505478 | None:intergenic |
| TTCCTTAACTGCCTCAAGTT+CGG | 0.393340 | 4.4:+32506359 | None:intergenic |
| TTTGAGTTCTTCCTGATTGA+GGG | 0.393979 | 4.4:+32505459 | None:intergenic |
| TTTGAGCCACCAATGCTGCC+TGG | 0.397662 | 4.4:+32507183 | None:intergenic |
| CAATATAAGGTTATTATCAC+TGG | 0.402454 | 4.4:+32506821 | None:intergenic |
| AGGAAGAATCAAATGCCAAT+AGG | 0.404807 | 4.4:-32505855 | MS.gene96598:CDS |
| GAAACTGAAGGAGAATATAT+TGG | 0.409904 | 4.4:-32505737 | MS.gene96598:CDS |
| TGTTGCCGGTGGTGCTTTGT+TGG | 0.413551 | 4.4:+32508575 | None:intergenic |
| GCTGATTTCCGCTCAACAGC+TGG | 0.414676 | 4.4:+32508438 | None:intergenic |
| GCATGAAAATGGTGATCTTT+CGG | 0.415307 | 4.4:-32505584 | MS.gene96598:CDS |
| GCCTCTGGAAGTTCTCTCTC+TGG | 0.419412 | 4.4:+32505250 | None:intergenic |
| ATCCGAACTTGAGGCAGTTA+AGG | 0.419625 | 4.4:-32506361 | MS.gene96598:CDS |
| TCTTCCAATGATTTAGCCTC+TGG | 0.426077 | 4.4:+32505235 | None:intergenic |
| CTAACTTCAAATCTTCAATC+TGG | 0.431089 | 4.4:+32506106 | None:intergenic |
| CCGAGCTGTTGAATTGGAAC+AGG | 0.431367 | 4.4:-32507126 | MS.gene96598:CDS |
| CATAGCTTTCCCTTTCAGCT+TGG | 0.431387 | 4.4:+32506133 | None:intergenic |
| TGTTGAGCTTTCCCTCAATC+AGG | 0.432554 | 4.4:-32505470 | MS.gene96598:CDS |
| CCATCTGCAGGAAGCTCTAA+AGG | 0.434538 | 4.4:-32505779 | MS.gene96598:CDS |
| TCAGATGCTGATTTGGTCAC+TGG | 0.435750 | 4.4:+32508528 | None:intergenic |
| GTTATAGAGAACATTGATAA+TGG | 0.439389 | 4.4:-32505145 | MS.gene96598:CDS |
| GAGCTTCTCATTTGCTTCCT+CGG | 0.442024 | 4.4:+32507205 | None:intergenic |
| GTTTGAGTTCTTCCTGATTG+AGG | 0.445779 | 4.4:+32505458 | None:intergenic |
| CCTAAACCTGTGAAAATGAA+TGG | 0.446361 | 4.4:-32505376 | MS.gene96598:CDS |
| ACTTCCAGAGGCTAAATCAT+TGG | 0.450557 | 4.4:-32505239 | MS.gene96598:CDS |
| GAGATCTGCATCAGAATCCT+TGG | 0.462775 | 4.4:-32506583 | MS.gene96598:CDS |
| CTCAAGCTCCTCAGTGGTTG+AGG | 0.472269 | 4.4:+32507010 | None:intergenic |
| TCTAAGCAACCAAGCTGAAA+GGG | 0.473285 | 4.4:-32506142 | MS.gene96598:CDS |
| GGAAGCTTGCTCAAGAAGAA+AGG | 0.475338 | 4.4:-32505049 | MS.gene96598:CDS |
| AGCTGAATTGACACAGTTGA+AGG | 0.478624 | 4.4:-32506874 | MS.gene96598:CDS |
| CCTTTAGAGCTTCCTGCAGA+TGG | 0.481010 | 4.4:+32505779 | None:intergenic |
| GGCTCAAAAGCAGGCTAAAG+AGG | 0.482156 | 4.4:-32507168 | MS.gene96598:CDS |
| AAGAAGAAGAAAGCTTTGCT+TGG | 0.483792 | 4.4:-32505079 | MS.gene96598:CDS |
| AGGAAGATGAGAGCAAAGAA+AGG | 0.487813 | 4.4:-32505345 | MS.gene96598:CDS |
| GGAAGAATCAAATGCCAATA+GGG | 0.488686 | 4.4:-32505854 | MS.gene96598:CDS |
| CATCAGCATGATTTAATGCC+TGG | 0.490454 | 4.4:+32506946 | None:intergenic |
| ATCAATGTTCTCTATAACAG+TGG | 0.492151 | 4.4:+32505150 | None:intergenic |
| AGCATTGGTGGCTCAAAAGC+AGG | 0.492354 | 4.4:-32507177 | MS.gene96598:CDS |
| AAAACGATGAACTCCGAGCT+AGG | 0.492776 | 4.4:-32505681 | MS.gene96598:CDS |
| CTGCTTCATTACAGATTCCA+AGG | 0.493723 | 4.4:+32506566 | None:intergenic |
| AGAAGCACAAAGAGTGGCCG+AGG | 0.498602 | 4.4:-32507222 | MS.gene96598:CDS |
| GAAGCTCCAGGCAGCATTGG+TGG | 0.499796 | 4.4:-32507189 | MS.gene96598:CDS |
| ACAAGCTCCAAGAGCTGCAA+AGG | 0.501010 | 4.4:-32507354 | MS.gene96598:CDS |
| AGTTAAGGAACTAGAAATGA+GGG | 0.504114 | 4.4:-32506628 | MS.gene96598:CDS |
| TTCTAAGCAACCAAGCTGAA+AGG | 0.505989 | 4.4:-32506143 | MS.gene96598:CDS |
| TGAGAAGCTCCAGGCAGCAT+TGG | 0.514376 | 4.4:-32507192 | MS.gene96598:CDS |
| CTATTATTGCTTACATCAGG+TGG | 0.516293 | 4.4:+32508399 | None:intergenic |
| GAGAATGGTCATGGATATGG+AGG | 0.517496 | 4.4:-32505511 | MS.gene96598:CDS |
| GCAAAATTCACGTCTTTCTG+TGG | 0.518226 | 4.4:-32508490 | MS.gene96598:CDS |
| TAGATTCGGCTTCCCTAGCT+CGG | 0.520735 | 4.4:+32505668 | None:intergenic |
| TGGTGCTTTGTTGGAACTGT+CGG | 0.523110 | 4.4:+32508584 | None:intergenic |
| TGAAGAAGAGAATGCGGCCG+CGG | 0.524949 | 4.4:-32505920 | MS.gene96598:CDS |
| TTCTTGTGTTGAATCTAGCA+AGG | 0.527152 | 4.4:+32506851 | None:intergenic |
| GGTTGAAGAATCAAACAAGT+TGG | 0.530427 | 4.4:-32506607 | MS.gene96598:CDS |
| GACCGAGGCTATCCATCTGC+AGG | 0.531409 | 4.4:-32505791 | MS.gene96598:CDS |
| GCAGATCCTTCAAGCTGAGA+AGG | 0.531854 | 4.4:-32507273 | MS.gene96598:CDS |
| GGAAGCAAATGAGAAGCTCC+AGG | 0.537000 | 4.4:-32507201 | MS.gene96598:CDS |
| AACCACTGAGGAGCTTGAGC+GGG | 0.538320 | 4.4:-32507006 | MS.gene96598:CDS |
| AAGTTAAGGAACTAGAAATG+AGG | 0.538694 | 4.4:-32506629 | MS.gene96598:CDS |
| CTCAGTGGTTGAGGCAAGAG+TGG | 0.539143 | 4.4:+32507019 | None:intergenic |
| GGACGAAGAAGCTCAGTTGA+AGG | 0.541111 | 4.4:-32505833 | MS.gene96598:CDS |
| TGAATAAGAAGGAAGAAGAA+TGG | 0.541280 | 4.4:-32507088 | MS.gene96598:CDS |
| AGAGGCTAAATCATTGGAAG+AGG | 0.542206 | 4.4:-32505233 | MS.gene96598:CDS |
| AGTTAAGGAAGAGAAAGATC+AGG | 0.542809 | 4.4:-32506346 | MS.gene96598:CDS |
| TGCTACTCTTAAAGAGAAGG+TGG | 0.543694 | 4.4:-32506499 | MS.gene96598:CDS |
| TGATCTTTCGGACAGCGAAA+AGG | 0.544136 | 4.4:-32505572 | MS.gene96598:CDS |
| ACGCCGTCTTCTTATGGCTA+AGG | 0.545598 | 4.4:-32506424 | MS.gene96598:CDS |
| CAGTTCCAACAAAGCACCAC+CGG | 0.546168 | 4.4:-32508580 | MS.gene96598:CDS |
| GCTGTTGAATTGGAACAGGC+TGG | 0.548085 | 4.4:-32507122 | MS.gene96598:CDS |
| TGGCCACATCCAAGGCATGC+TGG | 0.548388 | 4.4:+32507039 | None:intergenic |
| GGCTTTGAATTCACAGATCG+TGG | 0.550956 | 4.4:+32508459 | None:intergenic |
| TGTGAGGAACCAGCATGCCT+TGG | 0.551371 | 4.4:-32507048 | MS.gene96598:CDS |
| CAATGAATTGGAGAATTCTA+GGG | 0.553198 | 4.4:-32506256 | MS.gene96598:CDS |
| TATTATTGCTTACATCAGGT+GGG | 0.554905 | 4.4:+32508400 | None:intergenic |
| AATTGAAACTGTGAATAAGA+AGG | 0.556477 | 4.4:-32507099 | MS.gene96598:CDS |
| GGAAGATGAGAGCAAAGAAA+GGG | 0.556487 | 4.4:-32505344 | MS.gene96598:CDS |
| CAACCACTGAGGAGCTTGAG+CGG | 0.561441 | 4.4:-32507007 | MS.gene96598:CDS |
| CTTCCTTAGCCATAAGAAGA+CGG | 0.564152 | 4.4:+32506421 | None:intergenic |
| ACTGAGTCAAAGACAGAAGA+AGG | 0.566826 | 4.4:-32505208 | MS.gene96598:CDS |
| TACTTTCTCAGCATGAACCT+CGG | 0.567598 | 4.4:+32506908 | None:intergenic |
| TGAAAAGTCAAAGAAGATTG+AGG | 0.568592 | 4.4:-32506391 | MS.gene96598:CDS |
| TGGTCATGGATATGGAGGAG+AGG | 0.569474 | 4.4:-32505506 | MS.gene96598:CDS |
| GGAAGCCGAATCTATTAAGA+AGG | 0.570744 | 4.4:-32505659 | MS.gene96598:CDS |
| GGCAAGAGTGGCCACATCCA+AGG | 0.575724 | 4.4:+32507031 | None:intergenic |
| AAGAAGTAGAATTCAAAATG+TGG | 0.576268 | 4.4:-32505312 | MS.gene96598:CDS |
| AAACGATGAACTCCGAGCTA+GGG | 0.576737 | 4.4:-32505680 | MS.gene96598:CDS |
| AGAAGTAGAATTCAAAATGT+GGG | 0.576995 | 4.4:-32505311 | MS.gene96598:CDS |
| TGAGAACTCGAAGGCTGAGT+GGG | 0.577593 | 4.4:-32505983 | MS.gene96598:CDS |
| GTTCTTAGCATCACACATCA+TGG | 0.582449 | 4.4:+32506968 | None:intergenic |
| AGCTGCTACTCTTAAAGAGA+AGG | 0.582698 | 4.4:-32506502 | MS.gene96598:CDS |
| ATTATTGCTTACATCAGGTG+GGG | 0.583904 | 4.4:+32508401 | None:intergenic |
| ATAGAGAACATTGATAATGG+TGG | 0.585848 | 4.4:-32505142 | MS.gene96598:CDS |
| TTATGCAAACAGTCTGCTTG+AGG | 0.587993 | 4.4:-32506664 | MS.gene96598:CDS |
| GCTTTGTTGGAACTGTCGGA+TGG | 0.588599 | 4.4:+32508588 | None:intergenic |
| AGAAGATCTAAAGAAAGCAA+AGG | 0.589350 | 4.4:-32507297 | MS.gene96598:CDS |
| ATGTAGAACTTGAAACCTCA+AGG | 0.589981 | 4.4:-32506698 | MS.gene96598:CDS |
| GAACCAGCATGCCTTGGATG+TGG | 0.590468 | 4.4:-32507042 | MS.gene96598:CDS |
| AAGACAGAAGAAGGTGGTGA+TGG | 0.591342 | 4.4:-32505199 | MS.gene96598:CDS |
| AGGGAATGAGTTATGATGAG+AGG | 0.592178 | 4.4:-32506755 | MS.gene96598:CDS |
| GCGTTCTGAATCCTCAAGAT+CGG | 0.596202 | 4.4:+32506443 | None:intergenic |
| GGCTCTTGAATCCGAACTTG+AGG | 0.596607 | 4.4:-32506370 | MS.gene96598:CDS |
| CGAATCTATTAAGAAGGTGG+AGG | 0.596983 | 4.4:-32505653 | MS.gene96598:CDS |
| TCAGTTGAAGGAAAATCTGA+AGG | 0.598448 | 4.4:-32505821 | MS.gene96598:CDS |
| CAAGCTCCAAGAGCTGCAAA+GGG | 0.600838 | 4.4:-32507353 | MS.gene96598:CDS |
| CAAACAGTCTGCTTGAGGAG+TGG | 0.607787 | 4.4:-32506659 | MS.gene96598:CDS |
| CCTGTTCCAATTCAACAGCT+CGG | 0.607837 | 4.4:+32507126 | None:intergenic |
| GTCTGAGAACGTGAAACTGA+AGG | 0.607986 | 4.4:-32505749 | MS.gene96598:CDS |
| CCTTCAAGCTGAGAAGGAGA+AGG | 0.610724 | 4.4:-32507267 | MS.gene96598:CDS |
| AGCCGAATCTATTAAGAAGG+TGG | 0.611971 | 4.4:-32505656 | MS.gene96598:CDS |
| ATTGCTTACATCAGGTGGGG+TGG | 0.612190 | 4.4:+32508404 | None:intergenic |
| GAAAATGAATGGAAAACCAA+AGG | 0.613917 | 4.4:-32505365 | MS.gene96598:CDS |
| GAATGTGTTTGAGAACTCGA+AGG | 0.623748 | 4.4:-32505992 | MS.gene96598:CDS |
| TAATAGGGTCTGCACATGAG+AGG | 0.625836 | 4.4:+32506299 | None:intergenic |
| AACCCGCTCAAGCTCCTCAG+TGG | 0.633744 | 4.4:+32507004 | None:intergenic |
| CTCAAGAAAGAACTCGACAA+GGG | 0.633999 | 4.4:-32506774 | MS.gene96598:CDS |
| TCTCAAGAAAGAACTCGACA+AGG | 0.634380 | 4.4:-32506775 | MS.gene96598:CDS |
| TTCCTGCAGATGGATAGCCT+CGG | 0.644406 | 4.4:+32505789 | None:intergenic |
| ATAAGATTCAGCCGTCCTTG+AGG | 0.647778 | 4.4:+32506683 | None:intergenic |
| TTATTTGCTTAAACAAACTG+AGG | 0.648313 | 4.4:-32505875 | MS.gene96598:CDS |
| TTGAGAACTCGAAGGCTGAG+TGG | 0.651278 | 4.4:-32505984 | MS.gene96598:CDS |
| GTTGAAAGAAGCACAAAGAG+TGG | 0.652851 | 4.4:-32507228 | MS.gene96598:CDS |
| TGGAGGAGAGGAAATTCCAA+AGG | 0.653330 | 4.4:-32505494 | MS.gene96598:CDS |
| ATTCAAAGCCAGCTGTTGAG+CGG | 0.660562 | 4.4:-32508446 | MS.gene96598:CDS |
| GCTACTCTTAAAGAGAAGGT+GGG | 0.661481 | 4.4:-32506498 | MS.gene96598:CDS |
| AGCTTGCTCAAGAAGAAAGG+TGG | 0.662119 | 4.4:-32505046 | MS.gene96598:CDS |
| GAAAACTGAAGAAGAGAATG+CGG | 0.663328 | 4.4:-32505926 | MS.gene96598:CDS |
| AGTCAATGCTTGATGAAGCG+CGG | 0.666394 | 4.4:-32506056 | MS.gene96598:CDS |
| TGATGCAGCTAAAGTTGCCG+AGG | 0.669959 | 4.4:-32506925 | MS.gene96598:CDS |
| AGAACTTGAAACCTCAAGGA+CGG | 0.671436 | 4.4:-32506694 | MS.gene96598:CDS |
| TCTGAAGGAAGTTGAGACCG+AGG | 0.687621 | 4.4:-32505806 | MS.gene96598:CDS |
| CACTCTTGCCTCAACCACTG+AGG | 0.695834 | 4.4:-32507018 | MS.gene96598:CDS |
| ACCAGAGAGAGAACTTCCAG+AGG | 0.698874 | 4.4:-32505251 | MS.gene96598:CDS |
| GATGTGTGATGCTAAGAACC+AGG | 0.701568 | 4.4:-32506964 | MS.gene96598:CDS |
| GAGTCAAAGACAGAAGAAGG+TGG | 0.711580 | 4.4:-32505205 | MS.gene96598:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAGTAATTGAAATGA+AGG | + | chr4.4:32505332-32505351 | None:intergenic | 15.0% |
| !!! | TAATAATTTGACATTTTTGT+GGG | - | chr4.4:32505453-32505472 | MS.gene96598:CDS | 15.0% |
| !!! | TCATTTCAATTACTATTTTT+GGG | - | chr4.4:32505332-32505351 | MS.gene96598:CDS | 15.0% |
| !!! | TTCATTTCAATTACTATTTT+TGG | - | chr4.4:32505331-32505350 | MS.gene96598:CDS | 15.0% |
| !! | ATTATTGATATTATGAAGCA+CGG | - | chr4.4:32505824-32505843 | MS.gene96598:CDS | 20.0% |
| !! | ATTCTGTAATGTCTATTATT+TGG | - | chr4.4:32505516-32505535 | MS.gene96598:CDS | 20.0% |
| !! | GGAAAAAGAAATAAATAGAT+TGG | - | chr4.4:32507726-32507745 | MS.gene96598:intron | 20.0% |
| !! | GTAAAATACTGTTAAACATA+AGG | + | chr4.4:32505576-32505595 | None:intergenic | 20.0% |
| !!! | AATAATTTGACATTTTTGTG+GGG | - | chr4.4:32505454-32505473 | MS.gene96598:CDS | 20.0% |
| !!! | CTAATAATTTGACATTTTTG+TGG | - | chr4.4:32505452-32505471 | MS.gene96598:CDS | 20.0% |
| !!! | TTTGTTTTTCTCTTCTAATA+GGG | + | chr4.4:32507344-32507363 | None:intergenic | 20.0% |
| ! | AAACAAACTCATCAATGAAT+TGG | - | chr4.4:32507357-32507376 | MS.gene96598:CDS | 25.0% |
| ! | AAGAAGTAGAATTCAAAATG+TGG | - | chr4.4:32508313-32508332 | MS.gene96598:intron | 25.0% |
| ! | AATAGACATTACAGAATGAA+AGG | + | chr4.4:32505513-32505532 | None:intergenic | 25.0% |
| ! | AATCTATTATTGCTTACATC+AGG | + | chr4.4:32505232-32505251 | None:intergenic | 25.0% |
| ! | AATTGAAACTGTGAATAAGA+AGG | - | chr4.4:32506526-32506545 | MS.gene96598:CDS | 25.0% |
| ! | AGAAGAAGAAAAAAGCAAAA+AGG | - | chr4.4:32507393-32507412 | MS.gene96598:intron | 25.0% |
| ! | AGAAGTAGAATTCAAAATGT+GGG | - | chr4.4:32508314-32508333 | MS.gene96598:intron | 25.0% |
| ! | CAATATAAGGTTATTATCAC+TGG | + | chr4.4:32506807-32506826 | None:intergenic | 25.0% |
| ! | GTTATAGAGAACATTGATAA+TGG | - | chr4.4:32508480-32508499 | MS.gene96598:CDS | 25.0% |
| ! | TAAGTAAAAACAAGTGACAT+GGG | + | chr4.4:32506053-32506072 | None:intergenic | 25.0% |
| ! | TGTAATGTCTATTATTTGGT+TGG | - | chr4.4:32505520-32505539 | MS.gene96598:CDS | 25.0% |
| ! | TGTACTTATTATGTATTGCT+TGG | - | chr4.4:32506236-32506255 | MS.gene96598:CDS | 25.0% |
| ! | TTAAGTAAAAACAAGTGACA+TGG | + | chr4.4:32506054-32506073 | None:intergenic | 25.0% |
| ! | TTATTTGCTTAAACAAACTG+AGG | - | chr4.4:32507750-32507769 | MS.gene96598:intron | 25.0% |
| !! | ATTTTGAATTCTACTTCTTC+TGG | + | chr4.4:32508312-32508331 | None:intergenic | 25.0% |
| !! | TTGCTAACTTTACTTACTTT+TGG | + | chr4.4:32505076-32505095 | None:intergenic | 25.0% |
| !!! | GATTTGAAGTTAGTCTTAAA+AGG | - | chr4.4:32507529-32507548 | MS.gene96598:intron | 25.0% |
| !!! | GTTTGTTTTTCTCTTCTAAT+AGG | + | chr4.4:32507345-32507364 | None:intergenic | 25.0% |
| !!! | TCTATTTATTTCTTTTTCCG+CGG | + | chr4.4:32507725-32507744 | None:intergenic | 25.0% |
| AAAGCTTTGCTTGGAAAATT+TGG | - | chr4.4:32508555-32508574 | MS.gene96598:CDS | 30.0% | |
| AAGTTAAGGAACTAGAAATG+AGG | - | chr4.4:32506996-32507015 | MS.gene96598:CDS | 30.0% | |
| AATACTGTTAAACATAAGGC+AGG | + | chr4.4:32505572-32505591 | None:intergenic | 30.0% | |
| AATTGACAGCAAAAAAGAAG+TGG | + | chr4.4:32505751-32505770 | None:intergenic | 30.0% | |
| AGAAAAAAGCAAAAAGGCAA+TGG | - | chr4.4:32507399-32507418 | MS.gene96598:intron | 30.0% | |
| AGAAGATCTAAAGAAAGCAA+AGG | - | chr4.4:32506328-32506347 | MS.gene96598:CDS | 30.0% | |
| AGTAAAATTCGACTCTTGAT+TGG | - | chr4.4:32506114-32506133 | MS.gene96598:CDS | 30.0% | |
| AGTTAAGGAACTAGAAATGA+GGG | - | chr4.4:32506997-32507016 | MS.gene96598:CDS | 30.0% | |
| ATCAATGTTCTCTATAACAG+TGG | + | chr4.4:32508478-32508497 | None:intergenic | 30.0% | |
| CAATGAATTGGAGAATTCTA+GGG | - | chr4.4:32507369-32507388 | MS.gene96598:intron | 30.0% | |
| CACTAGATATTTGAATCAAC+TGG | + | chr4.4:32505640-32505659 | None:intergenic | 30.0% | |
| CTAACTTCAAATCTTCAATC+TGG | + | chr4.4:32507522-32507541 | None:intergenic | 30.0% | |
| CTGCTTTCAACTTCAATATA+AGG | + | chr4.4:32506820-32506839 | None:intergenic | 30.0% | |
| GAAAATGAATGGAAAACCAA+AGG | - | chr4.4:32508260-32508279 | MS.gene96598:intron | 30.0% | |
| GAAACTGAAGGAGAATATAT+TGG | - | chr4.4:32507888-32507907 | MS.gene96598:intron | 30.0% | |
| GATTCAAGTCATAAACCAAA+TGG | + | chr4.4:32505800-32505819 | None:intergenic | 30.0% | |
| GTAAAATTCGACTCTTGATT+GGG | - | chr4.4:32506115-32506134 | MS.gene96598:CDS | 30.0% | |
| GTTGCTTAGAAAATTCTCTT+TGG | + | chr4.4:32507473-32507492 | None:intergenic | 30.0% | |
| TATTATTGCTTACATCAGGT+GGG | + | chr4.4:32505228-32505247 | None:intergenic | 30.0% | |
| TCAATGAATTGGAGAATTCT+AGG | - | chr4.4:32507368-32507387 | MS.gene96598:intron | 30.0% | |
| TCAGAAAATTCAACGACTTT+AGG | + | chr4.4:32508093-32508112 | None:intergenic | 30.0% | |
| TCATCTACTAATATGAAGCA+CGG | + | chr4.4:32506011-32506030 | None:intergenic | 30.0% | |
| TGAAAAGTCAAAGAAGATTG+AGG | - | chr4.4:32507234-32507253 | MS.gene96598:CDS | 30.0% | |
| TGAATAAGAAGGAAGAAGAA+TGG | - | chr4.4:32506537-32506556 | MS.gene96598:CDS | 30.0% | |
| TGTCTATTATTTGGTTGGAT+TGG | - | chr4.4:32505525-32505544 | MS.gene96598:CDS | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | - | chr4.4:32505922-32505941 | MS.gene96598:CDS | 30.0% | |
| TTTCCAATTATTAGCTGTGT+CGG | + | chr4.4:32505891-32505910 | None:intergenic | 30.0% | |
| ! | GAGAGCTTTGATAAGATAAA+TGG | - | chr4.4:32508450-32508469 | MS.gene96598:CDS | 30.0% |
| ! | TCTCTTCTTCAGTTTTCTTT+AGG | + | chr4.4:32507696-32507715 | None:intergenic | 30.0% |
| ! | TTATCATGCTCTCTTTTGAA+AGG | - | chr4.4:32506198-32506217 | MS.gene96598:CDS | 30.0% |
| !! | ATAGAGAACATTGATAATGG+TGG | - | chr4.4:32508483-32508502 | MS.gene96598:CDS | 30.0% |
| !! | GTTGAATTTTCTGAAGAGAA+TGG | - | chr4.4:32508099-32508118 | MS.gene96598:intron | 30.0% |
| !! | TATTATTTGGTTGGATTGGT+TGG | - | chr4.4:32505529-32505548 | MS.gene96598:CDS | 30.0% |
| !! | TGTTGTTGTTCTTCTTTTAC+TGG | + | chr4.4:32508516-32508535 | None:intergenic | 30.0% |
| AAAATTCCGAGCTGTTGAAT+TGG | - | chr4.4:32506493-32506512 | MS.gene96598:CDS | 35.0% | |
| AAGAAGAAGAAAGCTTTGCT+TGG | - | chr4.4:32508546-32508565 | MS.gene96598:CDS | 35.0% | |
| AATCACACTGAGCATGAAAA+TGG | - | chr4.4:32508030-32508049 | MS.gene96598:intron | 35.0% | |
| AGGAAGAATCAAATGCCAAT+AGG | - | chr4.4:32507770-32507789 | MS.gene96598:intron | 35.0% | |
| AGTTAAGGAAGAGAAAGATC+AGG | - | chr4.4:32507279-32507298 | MS.gene96598:CDS | 35.0% | |
| ATGTAGAACTTGAAACCTCA+AGG | - | chr4.4:32506927-32506946 | MS.gene96598:CDS | 35.0% | |
| ATTATTGCTTACATCAGGTG+GGG | + | chr4.4:32505227-32505246 | None:intergenic | 35.0% | |
| CCTAAACCTGTGAAAATGAA+TGG | - | chr4.4:32508249-32508268 | MS.gene96598:intron | 35.0% | |
| CTATTATTGCTTACATCAGG+TGG | + | chr4.4:32505229-32505248 | None:intergenic | 35.0% | |
| CTCCACCTTCTTAATAGATT+CGG | + | chr4.4:32507974-32507993 | None:intergenic | 35.0% | |
| GAAAACTGAAGAAGAGAATG+CGG | - | chr4.4:32507699-32507718 | MS.gene96598:intron | 35.0% | |
| GATATTATGAAGCACGGATA+CGG | - | chr4.4:32505830-32505849 | MS.gene96598:CDS | 35.0% | |
| GCATGAAAATGGTGATCTTT+CGG | - | chr4.4:32508041-32508060 | MS.gene96598:intron | 35.0% | |
| GGAAGAATCAAATGCCAATA+GGG | - | chr4.4:32507771-32507790 | MS.gene96598:intron | 35.0% | |
| GGAGTGGAAAAAGAAAGTTA+AGG | - | chr4.4:32506982-32507001 | MS.gene96598:CDS | 35.0% | |
| GGTTGAAGAATCAAACAAGT+TGG | - | chr4.4:32507018-32507037 | MS.gene96598:CDS | 35.0% | |
| TATCGAATCGAGATATGACT+CGG | + | chr4.4:32505606-32505625 | None:intergenic | 35.0% | |
| TCAGTTGAAGGAAAATCTGA+AGG | - | chr4.4:32507804-32507823 | MS.gene96598:intron | 35.0% | |
| TTCAGTAGACTTGAGATGTT+AGG | + | chr4.4:32505375-32505394 | None:intergenic | 35.0% | |
| TTCTTGTGTTGAATCTAGCA+AGG | + | chr4.4:32506777-32506796 | None:intergenic | 35.0% | |
| ! | AAAAAGAGCTTGAAAGTGTG+AGG | - | chr4.4:32506561-32506580 | MS.gene96598:CDS | 35.0% |
| ! | CCATTCATTTTCACAGGTTT+AGG | + | chr4.4:32508252-32508271 | None:intergenic | 35.0% |
| ! | GAAAGACGTGAATTTTGCAA+CGG | + | chr4.4:32505133-32505152 | None:intergenic | 35.0% |
| ! | GGTTTTCCATTCATTTTCAC+AGG | + | chr4.4:32508258-32508277 | None:intergenic | 35.0% |
| ! | GTCTACTGAAAAGTGTGATA+AGG | - | chr4.4:32505385-32505404 | MS.gene96598:CDS | 35.0% |
| ! | TTTGAGTTCTTCCTGATTGA+GGG | + | chr4.4:32508169-32508188 | None:intergenic | 35.0% |
| !! | TTTTCTGAAGAGAATGGTCA+TGG | - | chr4.4:32508105-32508124 | MS.gene96598:intron | 35.0% |
| !!! | TTACTTACTTTTGGTGTTGC+CGG | + | chr4.4:32505067-32505086 | None:intergenic | 35.0% |
| ACTGAGTCAAAGACAGAAGA+AGG | - | chr4.4:32508417-32508436 | MS.gene96598:CDS | 40.0% | |
| ACTTCCAGAGGCTAAATCAT+TGG | - | chr4.4:32508386-32508405 | MS.gene96598:intron | 40.0% | |
| AGAACTTGAAACCTCAAGGA+CGG | - | chr4.4:32506931-32506950 | MS.gene96598:CDS | 40.0% | |
| AGAGGCTAAATCATTGGAAG+AGG | - | chr4.4:32508392-32508411 | MS.gene96598:intron | 40.0% | |
| AGCCGAATCTATTAAGAAGG+TGG | - | chr4.4:32507969-32507988 | MS.gene96598:intron | 40.0% | |
| AGCTGAATTGACACAGTTGA+AGG | - | chr4.4:32506751-32506770 | MS.gene96598:CDS | 40.0% | |
| AGCTGCTACTCTTAAAGAGA+AGG | - | chr4.4:32507123-32507142 | MS.gene96598:CDS | 40.0% | |
| AGGAAGATGAGAGCAAAGAA+AGG | - | chr4.4:32508280-32508299 | MS.gene96598:intron | 40.0% | |
| AGGGAATGAGTTATGATGAG+AGG | - | chr4.4:32506870-32506889 | MS.gene96598:CDS | 40.0% | |
| CATCAGCATGATTTAATGCC+TGG | + | chr4.4:32506682-32506701 | None:intergenic | 40.0% | |
| CGAATCTATTAAGAAGGTGG+AGG | - | chr4.4:32507972-32507991 | MS.gene96598:intron | 40.0% | |
| CTCAAGAAAGAACTCGACAA+GGG | - | chr4.4:32506851-32506870 | MS.gene96598:CDS | 40.0% | |
| CTGCTTCATTACAGATTCCA+AGG | + | chr4.4:32507062-32507081 | None:intergenic | 40.0% | |
| CTTCCTTAGCCATAAGAAGA+CGG | + | chr4.4:32507207-32507226 | None:intergenic | 40.0% | |
| GAACCATTCTAACGAATCTC+TGG | - | chr4.4:32505706-32505725 | MS.gene96598:CDS | 40.0% | |
| GAAGAGAATGGTCATGGATA+TGG | - | chr4.4:32508111-32508130 | MS.gene96598:intron | 40.0% | |
| GAATGTGTTTGAGAACTCGA+AGG | - | chr4.4:32507633-32507652 | MS.gene96598:intron | 40.0% | |
| GACAGCAAAAAAGAAGTGGT+TGG | + | chr4.4:32505747-32505766 | None:intergenic | 40.0% | |
| GAGTTGCACGATTGAGAAAA+AGG | - | chr4.4:32508338-32508357 | MS.gene96598:intron | 40.0% | |
| GCAAAATTCACGTCTTTCTG+TGG | - | chr4.4:32505135-32505154 | MS.gene96598:CDS | 40.0% | |
| GCTACTCTTAAAGAGAAGGT+GGG | - | chr4.4:32507127-32507146 | MS.gene96598:CDS | 40.0% | |
| GGAAGATGAGAGCAAAGAAA+GGG | - | chr4.4:32508281-32508300 | MS.gene96598:intron | 40.0% | |
| GGAAGCCGAATCTATTAAGA+AGG | - | chr4.4:32507966-32507985 | MS.gene96598:intron | 40.0% | |
| GTTCTTAGCATCACACATCA+TGG | + | chr4.4:32506660-32506679 | None:intergenic | 40.0% | |
| TACTTTCTCAGCATGAACCT+CGG | + | chr4.4:32506720-32506739 | None:intergenic | 40.0% | |
| TAGCCAGAGATTCGTTAGAA+TGG | + | chr4.4:32505712-32505731 | None:intergenic | 40.0% | |
| TCTAAGCAACCAAGCTGAAA+GGG | - | chr4.4:32507483-32507502 | MS.gene96598:intron | 40.0% | |
| TCTCAAGAAAGAACTCGACA+AGG | - | chr4.4:32506850-32506869 | MS.gene96598:CDS | 40.0% | |
| TCTTCCAATGATTTAGCCTC+TGG | + | chr4.4:32508393-32508412 | None:intergenic | 40.0% | |
| TCTTTGCTCTCATCTTCCTT+TGG | + | chr4.4:32508279-32508298 | None:intergenic | 40.0% | |
| TGCTACTCTTAAAGAGAAGG+TGG | - | chr4.4:32507126-32507145 | MS.gene96598:CDS | 40.0% | |
| TTATGCAAACAGTCTGCTTG+AGG | - | chr4.4:32506961-32506980 | MS.gene96598:CDS | 40.0% | |
| TTCATGCTCAGTGTGATTTC+TGG | + | chr4.4:32508028-32508047 | None:intergenic | 40.0% | |
| TTCCTTAACTGCCTCAAGTT+CGG | + | chr4.4:32507269-32507288 | None:intergenic | 40.0% | |
| TTCTAAGCAACCAAGCTGAA+AGG | - | chr4.4:32507482-32507501 | MS.gene96598:intron | 40.0% | |
| TTGAACTCGAGATGAGATTC+AGG | + | chr4.4:32505678-32505697 | None:intergenic | 40.0% | |
| ! | GACACTTCTCTTTTGCCATT+TGG | - | chr4.4:32505782-32505801 | MS.gene96598:CDS | 40.0% |
| ! | GTTGAAAGAAGCACAAAGAG+TGG | - | chr4.4:32506397-32506416 | MS.gene96598:CDS | 40.0% |
| ! | GTTTGAGTTCTTCCTGATTG+AGG | + | chr4.4:32508170-32508189 | None:intergenic | 40.0% |
| !! | AGCTCGGAATTTTTCGATCT+CGG | + | chr4.4:32506486-32506505 | None:intergenic | 40.0% |
| AAAACGATGAACTCCGAGCT+AGG | - | chr4.4:32507944-32507963 | MS.gene96598:intron | 45.0% | |
| AAACGATGAACTCCGAGCTA+GGG | - | chr4.4:32507945-32507964 | MS.gene96598:intron | 45.0% | |
| AAGACAGAAGAAGGTGGTGA+TGG | - | chr4.4:32508426-32508445 | MS.gene96598:CDS | 45.0% | |
| ACGCCGACACAGCTAATAAT+TGG | - | chr4.4:32505885-32505904 | MS.gene96598:CDS | 45.0% | |
| AGGGAAAGCTCAACAACCTT+TGG | + | chr4.4:32508150-32508169 | None:intergenic | 45.0% | |
| AGTCAATGCTTGATGAAGCG+CGG | - | chr4.4:32507569-32507588 | MS.gene96598:intron | 45.0% | |
| ATAAGATTCAGCCGTCCTTG+AGG | + | chr4.4:32506945-32506964 | None:intergenic | 45.0% | |
| ATCCGAACTTGAGGCAGTTA+AGG | - | chr4.4:32507264-32507283 | MS.gene96598:CDS | 45.0% | |
| ATTCAAAGCCAGCTGTTGAG+CGG | - | chr4.4:32505179-32505198 | MS.gene96598:CDS | 45.0% | |
| CATAGCTTTCCCTTTCAGCT+TGG | + | chr4.4:32507495-32507514 | None:intergenic | 45.0% | |
| CCTGTTCCAATTCAACAGCT+CGG | + | chr4.4:32506502-32506521 | None:intergenic | 45.0% | |
| GAGAATGGTCATGGATATGG+AGG | - | chr4.4:32508114-32508133 | MS.gene96598:intron | 45.0% | |
| GAGACAAAAAGCCGATCTTG+AGG | - | chr4.4:32507171-32507190 | MS.gene96598:CDS | 45.0% | |
| GAGATCTGCATCAGAATCCT+TGG | - | chr4.4:32507042-32507061 | MS.gene96598:CDS | 45.0% | |
| GAGCTTCTCATTTGCTTCCT+CGG | + | chr4.4:32506423-32506442 | None:intergenic | 45.0% | |
| GAGTCAAAGACAGAAGAAGG+TGG | - | chr4.4:32508420-32508439 | MS.gene96598:CDS | 45.0% | |
| GATGTGTGATGCTAAGAACC+AGG | - | chr4.4:32506661-32506680 | MS.gene96598:CDS | 45.0% | |
| GGAGGAGTTGTCAAAGTTAC+TGG | - | chr4.4:32507990-32508009 | MS.gene96598:intron | 45.0% | |
| GTCTGAGAACGTGAAACTGA+AGG | - | chr4.4:32507876-32507895 | MS.gene96598:intron | 45.0% | |
| TAAGGCAGGAACATCTTCAG+CGG | + | chr4.4:32505558-32505577 | None:intergenic | 45.0% | |
| TAATAGGGTCTGCACATGAG+AGG | + | chr4.4:32507329-32507348 | None:intergenic | 45.0% | |
| TGATCTTTCGGACAGCGAAA+AGG | - | chr4.4:32508053-32508072 | MS.gene96598:intron | 45.0% | |
| TGGAGGAGAGGAAATTCCAA+AGG | - | chr4.4:32508131-32508150 | MS.gene96598:intron | 45.0% | |
| TGTTGAGCTTTCCCTCAATC+AGG | - | chr4.4:32508155-32508174 | MS.gene96598:intron | 45.0% | |
| TTCAGAACGCCGTCTTCTTA+TGG | - | chr4.4:32507195-32507214 | MS.gene96598:CDS | 45.0% | |
| ! | AGCTTGCTCAAGAAGAAAGG+TGG | - | chr4.4:32508579-32508598 | MS.gene96598:CDS | 45.0% |
| ! | CGTGAATTTTGCAACGGAGA+TGG | + | chr4.4:32505127-32505146 | None:intergenic | 45.0% |
| ! | GCGTTCTGAATCCTCAAGAT+CGG | + | chr4.4:32507185-32507204 | None:intergenic | 45.0% |
| ! | GGAAACATCTGAGATGTGCA+AGG | - | chr4.4:32505406-32505425 | MS.gene96598:CDS | 45.0% |
| ! | GGAAGCTTGCTCAAGAAGAA+AGG | - | chr4.4:32508576-32508595 | MS.gene96598:CDS | 45.0% |
| ! | TGGTGCTTTGTTGGAACTGT+CGG | + | chr4.4:32505044-32505063 | None:intergenic | 45.0% |
| !! | GGCTTTGAATTCACAGATCG+TGG | + | chr4.4:32505169-32505188 | None:intergenic | 45.0% |
| !! | TCAGATGCTGATTTGGTCAC+TGG | + | chr4.4:32505100-32505119 | None:intergenic | 45.0% |
| ACAAGCTCCAAGAGCTGCAA+AGG | - | chr4.4:32506271-32506290 | MS.gene96598:CDS | 50.0% | |
| ACCAGAGAGAGAACTTCCAG+AGG | - | chr4.4:32508374-32508393 | MS.gene96598:intron | 50.0% | |
| ACGCCGTCTTCTTATGGCTA+AGG | - | chr4.4:32507201-32507220 | MS.gene96598:CDS | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | - | chr4.4:32505836-32505855 | MS.gene96598:CDS | 50.0% | |
| ATTGCTTACATCAGGTGGGG+TGG | + | chr4.4:32505224-32505243 | None:intergenic | 50.0% | |
| CAAACAGTCTGCTTGAGGAG+TGG | - | chr4.4:32506966-32506985 | MS.gene96598:CDS | 50.0% | |
| CAAGCTCCAAGAGCTGCAAA+GGG | - | chr4.4:32506272-32506291 | MS.gene96598:CDS | 50.0% | |
| CCGAGCTGTTGAATTGGAAC+AGG | - | chr4.4:32506499-32506518 | MS.gene96598:CDS | 50.0% | |
| CCTTCAAGCTGAGAAGGAGA+AGG | - | chr4.4:32506358-32506377 | MS.gene96598:CDS | 50.0% | |
| CCTTCTCCTTCTCAGCTTGA+AGG | + | chr4.4:32506361-32506380 | None:intergenic | 50.0% | |
| CGACTCTTGATTGGGAAAGC+AGG | - | chr4.4:32506123-32506142 | MS.gene96598:CDS | 50.0% | |
| CTGAGCTTCTTCGTCCCTAT+TGG | + | chr4.4:32507788-32507807 | None:intergenic | 50.0% | |
| GCAGATCCTTCAAGCTGAGA+AGG | - | chr4.4:32506352-32506371 | MS.gene96598:CDS | 50.0% | |
| GCTGTTGAATTGGAACAGGC+TGG | - | chr4.4:32506503-32506522 | MS.gene96598:CDS | 50.0% | |
| GGAAGCAAATGAGAAGCTCC+AGG | - | chr4.4:32506424-32506443 | MS.gene96598:CDS | 50.0% | |
| GGACGAAGAAGCTCAGTTGA+AGG | - | chr4.4:32507792-32507811 | MS.gene96598:intron | 50.0% | |
| GGCTCAAAAGCAGGCTAAAG+AGG | - | chr4.4:32506457-32506476 | MS.gene96598:CDS | 50.0% | |
| GGCTCTTGAATCCGAACTTG+AGG | - | chr4.4:32507255-32507274 | MS.gene96598:CDS | 50.0% | |
| TAGATTCGGCTTCCCTAGCT+CGG | + | chr4.4:32507960-32507979 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr4.4:32506000-32506019 | None:intergenic | 50.0% | |
| TCTGAACCCTTTGCAGCTCT+TGG | + | chr4.4:32506281-32506300 | None:intergenic | 50.0% | |
| TCTGAAGGAAGTTGAGACCG+AGG | - | chr4.4:32507819-32507838 | MS.gene96598:intron | 50.0% | |
| TGAGAACTCGAAGGCTGAGT+GGG | - | chr4.4:32507642-32507661 | MS.gene96598:intron | 50.0% | |
| TGATGCAGCTAAAGTTGCCG+AGG | - | chr4.4:32506700-32506719 | MS.gene96598:CDS | 50.0% | |
| TGGTCATGGATATGGAGGAG+AGG | - | chr4.4:32508119-32508138 | MS.gene96598:intron | 50.0% | |
| TTCCTGCAGATGGATAGCCT+CGG | + | chr4.4:32507839-32507858 | None:intergenic | 50.0% | |
| TTGAGAACTCGAAGGCTGAG+TGG | - | chr4.4:32507641-32507660 | MS.gene96598:intron | 50.0% | |
| ! | CAGTTCCAACAAAGCACCAC+CGG | - | chr4.4:32505045-32505064 | MS.gene96598:CDS | 50.0% |
| ! | CCATCTGCAGGAAGCTCTAA+AGG | - | chr4.4:32507846-32507865 | MS.gene96598:intron | 50.0% |
| ! | GCTTTGTTGGAACTGTCGGA+TGG | + | chr4.4:32505040-32505059 | None:intergenic | 50.0% |
| ! | TGGCGACTCAGATGCTGATT+TGG | + | chr4.4:32505107-32505126 | None:intergenic | 50.0% |
| !! | AGCATTGGTGGCTCAAAAGC+AGG | - | chr4.4:32506448-32506467 | MS.gene96598:CDS | 50.0% |
| !! | CCTTTAGAGCTTCCTGCAGA+TGG | + | chr4.4:32507849-32507868 | None:intergenic | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | - | chr4.4:32505933-32505952 | MS.gene96598:CDS | 50.0% |
| !!! | CTTACTTTTGGTGTTGCCGG+TGG | + | chr4.4:32505064-32505083 | None:intergenic | 50.0% |
| AACCACTGAGGAGCTTGAGC+GGG | - | chr4.4:32506619-32506638 | MS.gene96598:CDS | 55.0% | |
| CAACCACTGAGGAGCTTGAG+CGG | - | chr4.4:32506618-32506637 | MS.gene96598:CDS | 55.0% | |
| CACTCTTGCCTCAACCACTG+AGG | - | chr4.4:32506607-32506626 | MS.gene96598:CDS | 55.0% | |
| CTCAAGCTCCTCAGTGGTTG+AGG | + | chr4.4:32506618-32506637 | None:intergenic | 55.0% | |
| CTCAGTGGTTGAGGCAAGAG+TGG | + | chr4.4:32506609-32506628 | None:intergenic | 55.0% | |
| GAACCAGCATGCCTTGGATG+TGG | - | chr4.4:32506583-32506602 | MS.gene96598:CDS | 55.0% | |
| TGAAGAAGAGAATGCGGCCG+CGG | - | chr4.4:32507705-32507724 | MS.gene96598:intron | 55.0% | |
| TGAGAAGCTCCAGGCAGCAT+TGG | - | chr4.4:32506433-32506452 | MS.gene96598:CDS | 55.0% | |
| TGTGAGGAACCAGCATGCCT+TGG | - | chr4.4:32506577-32506596 | MS.gene96598:CDS | 55.0% | |
| TGTTGCCGGTGGTGCTTTGT+TGG | + | chr4.4:32505053-32505072 | None:intergenic | 55.0% | |
| TTTGAGCCACCAATGCTGCC+TGG | + | chr4.4:32506445-32506464 | None:intergenic | 55.0% | |
| ! | AGAAGCACAAAGAGTGGCCG+AGG | - | chr4.4:32506403-32506422 | MS.gene96598:CDS | 55.0% |
| ! | GCCTCTGGAAGTTCTCTCTC+TGG | + | chr4.4:32508378-32508397 | None:intergenic | 55.0% |
| ! | GCTGATTTCCGCTCAACAGC+TGG | + | chr4.4:32505190-32505209 | None:intergenic | 55.0% |
| AACCCGCTCAAGCTCCTCAG+TGG | + | chr4.4:32506624-32506643 | None:intergenic | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | - | chr4.4:32505962-32505981 | MS.gene96598:CDS | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | - | chr4.4:32505843-32505862 | MS.gene96598:CDS | 60.0% | |
| GACCGAGGCTATCCATCTGC+AGG | - | chr4.4:32507834-32507853 | MS.gene96598:intron | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | + | chr4.4:32505978-32505997 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr4.4:32505994-32506013 | None:intergenic | 60.0% | |
| GGCAAGAGTGGCCACATCCA+AGG | + | chr4.4:32506597-32506616 | None:intergenic | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr4.4:32505865-32505884 | None:intergenic | 60.0% | |
| TGGCCACATCCAAGGCATGC+TGG | + | chr4.4:32506589-32506608 | None:intergenic | 60.0% | |
| ! | GAAGCTCCAGGCAGCATTGG+TGG | - | chr4.4:32506436-32506455 | MS.gene96598:CDS | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr4.4:32505984-32506003 | None:intergenic | 60.0% |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | - | chr4.4:32505939-32505958 | MS.gene96598:CDS | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr4.4:32505980-32505999 | MS.gene96598:CDS | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | - | chr4.4:32505963-32505982 | MS.gene96598:CDS | 65.0% | |
| CACGGACACCGGACACGACA+CGG | - | chr4.4:32505854-32505873 | MS.gene96598:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 32505030 | 32508617 | 32505030 | ID=MS.gene96598 |
| chr4.4 | mRNA | 32505030 | 32508617 | 32505030 | ID=MS.gene96598.t1;Parent=MS.gene96598 |
| chr4.4 | exon | 32508413 | 32508617 | 32508413 | ID=MS.gene96598.t1.exon1;Parent=MS.gene96598.t1 |
| chr4.4 | CDS | 32508413 | 32508617 | 32508413 | ID=cds.MS.gene96598.t1;Parent=MS.gene96598.t1 |
| chr4.4 | exon | 32505030 | 32507378 | 32505030 | ID=MS.gene96598.t1.exon2;Parent=MS.gene96598.t1 |
| chr4.4 | CDS | 32505030 | 32507378 | 32505030 | ID=cds.MS.gene96598.t1;Parent=MS.gene96598.t1 |
| Gene Sequence |
| Protein sequence |
