AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003034.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003034.01.T01 MTR_1g054355 97.989 1243 23 2 1 1242 1 1242 0.0 2537
MsG0180003034.01.T01 MTR_7g093630 69.697 1254 350 16 9 1242 18 1261 0.0 1601
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003034.01.T01 AT3G58050 54.431 1275 453 26 1 1242 2 1181 0.0 1091
MsG0180003034.01.T01 AT3G58050 54.389 1276 453 27 1 1242 2 1182 0.0 1086
MsG0180003034.01.T01 AT2G41960 46.802 1282 567 31 1 1242 9 1215 0.0 937

Find 306 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGCATATAAATAGTTATT+TGG 0.129747 1:-55349490 None:intergenic
CCCAATTCAGTAATGGATTT+TGG 0.169365 1:+55343208 MsG0180003034.01.T01:CDS
AATGCAGTTGTTTCAGAAAA+TGG 0.194960 1:+55348272 MsG0180003034.01.T01:CDS
TGAAGGAAAATCAGACATTT+TGG 0.195901 1:+55346187 MsG0180003034.01.T01:CDS
ACCAAAATCCATTACTGAAT+TGG 0.252696 1:-55343209 None:intergenic
CGCCTCGTCACACTTATTTC+AGG 0.262306 1:-55348950 None:intergenic
TCTTGCAGCTCCACAGAAAT+TGG 0.268264 1:+55348917 MsG0180003034.01.T01:CDS
GCTTCACTGTGGAAACTATA+TGG 0.274909 1:+55350316 MsG0180003034.01.T01:three_prime_UTR
TGCAGACAGTTCTTCCTTTA+CGG 0.284502 1:-55347952 None:intergenic
GCCTGAGAAGACTCTGCCTT+TGG 0.285481 1:-55348639 None:intergenic
TGCTTCAATCAAAGAAAGTT+TGG 0.285787 1:+55348681 MsG0180003034.01.T01:CDS
TGTTAAAGCTCATGCATTAA+AGG 0.286398 1:+55346331 MsG0180003034.01.T01:CDS
TTTCTGAAACAACTGCATTA+TGG 0.289034 1:-55348268 None:intergenic
TTCTTCTTCCTCAAGAAGTT+TGG 0.300770 1:-55347778 None:intergenic
TGAGGGTTCATTGACACTTA+TGG 0.302180 1:+55344237 MsG0180003034.01.T01:CDS
CCAAAATCCATTACTGAATT+GGG 0.304564 1:-55343208 None:intergenic
GCCAGAGGTAAGGGCTTAAA+TGG 0.310052 1:+55349625 MsG0180003034.01.T01:CDS
AGAAATTCTCGAGCAAGTTC+AGG 0.323346 1:-55346669 None:intergenic
CCTCTGGTCACTCTACTGTT+TGG 0.324392 1:-55348503 None:intergenic
CTTCTAGGATGATGATTTGA+TGG 0.336517 1:+55346587 MsG0180003034.01.T01:intron
AACTGAACACCTGCTCCTTC+TGG 0.338542 1:-55344091 None:intergenic
CTCTGGTCACTCTACTGTTT+GGG 0.341769 1:-55348502 None:intergenic
ATTGGAGGAAGCATGCTTTC+AGG 0.344017 1:-55349349 None:intergenic
AGAAGAAAGGAAAGACTAAA+AGG 0.344085 1:+55347867 MsG0180003034.01.T01:CDS
GGAGCGGTTGGCCATGAAAC+TGG 0.346814 1:-55349439 None:intergenic
CCACGCTTCTGCTTGCAGTA+TGG 0.349076 1:+55349541 MsG0180003034.01.T01:CDS
TTAGAAAATTGTGAACCTTA+AGG 0.350431 1:-55349998 None:intergenic
GTGGTGGAGGAGGCCGTGGC+TGG 0.351779 1:+55344444 MsG0180003034.01.T01:CDS
GTCAAGAATGCGTACATTGC+AGG 0.352505 1:+55346354 MsG0180003034.01.T01:CDS
AGTTCTTCCTTTACGGCTTC+AGG 0.353169 1:-55347945 None:intergenic
CTGGCAACTGGATGATAAAC+TGG 0.353174 1:-55349607 None:intergenic
GTTGATGAAGTTGATGATTC+AGG 0.353204 1:+55348809 MsG0180003034.01.T01:CDS
TATTTATATGCTGGCCCTCT+TGG 0.354161 1:+55349499 MsG0180003034.01.T01:CDS
AGGCCCACCAAAATGAAATA+AGG 0.364254 1:-55349815 None:intergenic
TAATCGCCATTTGATAAATT+AGG 0.364743 1:-55348038 None:intergenic
ATGAATCACAGATCGAGAAT+TGG 0.365639 1:-55343079 None:intergenic
CCTGAGAAGACTCTGCCTTT+GGG 0.369331 1:-55348638 None:intergenic
GATAGTGATTTGAAGAGAAA+TGG 0.370222 1:+55348848 MsG0180003034.01.T01:CDS
TTTGAAAATGTTGGAACAAA+TGG 0.370818 1:+55346212 MsG0180003034.01.T01:CDS
CAACTGAATTCTTGCATGTA+AGG 0.371871 1:-55348001 None:intergenic
CAATGAATCCATTGCAGAAA+GGG 0.373421 1:+55349696 MsG0180003034.01.T01:CDS
TGGGGTCCGGAATGAAATTC+AGG 0.377989 1:+55344174 MsG0180003034.01.T01:CDS
ACTGCATCTTCAGACAATAT+TGG 0.378183 1:+55349868 MsG0180003034.01.T01:CDS
ACATCAATTCAAATTCAATC+TGG 0.381533 1:+55343136 MsG0180003034.01.T01:five_prime_UTR
GTCGCTATCTGTTCCATCCT+TGG 0.385339 1:+55349234 MsG0180003034.01.T01:CDS
GTTAAAGCTCATGCATTAAA+GGG 0.390375 1:+55346332 MsG0180003034.01.T01:CDS
TGCAATGGATTGCTTCTTGA+AGG 0.392860 1:+55344031 MsG0180003034.01.T01:CDS
TTTCTGGAATTAGCTGCAAC+TGG 0.392915 1:-55349724 None:intergenic
AGACAAGACAATCTCTTCTA+AGG 0.393182 1:+55344585 MsG0180003034.01.T01:CDS
CAGCATATAAATAGTTATTT+GGG 0.394767 1:-55349489 None:intergenic
ACACAGGAAATTGTATGTTT+CGG 0.396767 1:-55349378 None:intergenic
GTGTCTGACTGTTGTGAACT+TGG 0.400562 1:+55349166 MsG0180003034.01.T01:CDS
ACTGTGATCAGAATTATTCA+TGG 0.403139 1:-55348978 None:intergenic
TTATCGTACCAGGTATTTGA+TGG 0.403684 1:+55344374 MsG0180003034.01.T01:intron
TTGCGGCAAGTAATACCTTA+AGG 0.406330 1:+55349983 MsG0180003034.01.T01:CDS
TTTCCACAGTGAAGCAGCTT+TGG 0.407439 1:-55350308 None:intergenic
ACCATCAAAATCCAGTTTCA+TGG 0.413044 1:+55349428 MsG0180003034.01.T01:CDS
CACGTGCTAGGGAGCGGGAA+AGG 0.414122 1:+55344399 MsG0180003034.01.T01:CDS
AGAGGAAAAGAGCAAAAGAA+AGG 0.414909 1:+55347832 MsG0180003034.01.T01:CDS
ATGGATCCTGAATTTCATTC+CGG 0.415112 1:-55344180 None:intergenic
AGATCTGAGCCAAGACACTA+TGG 0.421084 1:+55348311 MsG0180003034.01.T01:CDS
AAGCCCTTACCTCTGGCAAC+TGG 0.421443 1:-55349619 None:intergenic
CAGTTTCCTTGTGGAAGACC+CGG 0.421561 1:+55344109 MsG0180003034.01.T01:CDS
GGATCCATCAGTTCATCCTT+GGG 0.421913 1:+55344195 MsG0180003034.01.T01:CDS
GGAAATTGTATGTTTCGGTT+TGG 0.422192 1:-55349373 None:intergenic
GTACATTGCAGGTTAATTGT+AGG 0.422401 1:+55346365 MsG0180003034.01.T01:CDS
TCAGGTTGAGAACAAACATT+GGG 0.423145 1:-55349331 None:intergenic
CACTTGAGAACTCTTCATCT+TGG 0.424933 1:-55348070 None:intergenic
AGACACTATGGAGATAATTT+CGG 0.426086 1:+55348323 MsG0180003034.01.T01:CDS
AGTCTTTGACGATAAAACTT+TGG 0.426381 1:-55348191 None:intergenic
TCCATTTAAGCCCTTACCTC+TGG 0.427065 1:-55349626 None:intergenic
GCTTCAATCAAAGAAAGTTT+GGG 0.428841 1:+55348682 MsG0180003034.01.T01:CDS
CCAGAAAAGCAGGACTGAAT+GGG 0.433343 1:+55349740 MsG0180003034.01.T01:CDS
ATTGAGATGAAGATGAGATT+TGG 0.434273 1:-55343013 None:intergenic
GCCTGTGGTGGAGGAGGCCG+TGG 0.434697 1:+55344440 MsG0180003034.01.T01:CDS
TTTCAGACTCCTTCAGCAAT+GGG 0.435960 1:+55349400 MsG0180003034.01.T01:CDS
TAGAGTGACCAGAGGTAGTC+GGG 0.436078 1:+55348511 MsG0180003034.01.T01:CDS
CGTTCATTTGAAAAGGCTAC+AGG 0.436274 1:-55349835 None:intergenic
AGGATCCATCAGTTCATCCT+TGG 0.436319 1:+55344194 MsG0180003034.01.T01:CDS
TGAATCACAGATCGAGAATT+GGG 0.438502 1:-55343078 None:intergenic
ATCGTCAAAGACTTAGATAT+AGG 0.438557 1:+55348201 MsG0180003034.01.T01:CDS
TCCAGAAAAGCAGGACTGAA+TGG 0.439603 1:+55349739 MsG0180003034.01.T01:CDS
CTCCGAGCTTGGAAATTAGA+TGG 0.441382 1:+55346290 MsG0180003034.01.T01:CDS
GAGGAAAAGAGCAAAAGAAA+GGG 0.441476 1:+55347833 MsG0180003034.01.T01:CDS
CTCTAGTGCCACATGAAGAA+TGG 0.441834 1:-55350051 None:intergenic
GATCATCACATTAGAAAAGC+AGG 0.441840 1:+55347641 MsG0180003034.01.T01:CDS
CCCGATGCCTGTGGTGGAGG+AGG 0.443475 1:+55344434 MsG0180003034.01.T01:CDS
TACATTGCAGGTTAATTGTA+GGG 0.444624 1:+55346366 MsG0180003034.01.T01:CDS
TGGCCAACCGCTCCCGCAAA+TGG 0.446227 1:+55349448 MsG0180003034.01.T01:CDS
GAATCATCAACTTCATCAAC+AGG 0.446675 1:-55348806 None:intergenic
TACCATAACTCACTATTCCT+TGG 0.447892 1:-55344472 None:intergenic
TAGTTATTTGGGTGTACAAA+GGG 0.448293 1:-55349478 None:intergenic
TATTTGATGGCGCACGTGCT+AGG 0.449121 1:+55344387 MsG0180003034.01.T01:CDS
AAGGGCATCAAACCATTTGC+GGG 0.449575 1:-55349460 None:intergenic
CAAGTCAATGGCCTAGATCT+TGG 0.449608 1:+55346242 MsG0180003034.01.T01:CDS
AAATGTTATACGAGAATTCA+AGG 0.451002 1:+55345878 MsG0180003034.01.T01:CDS
CCACAGTATCAGCAAATGTT+TGG 0.451945 1:-55346127 None:intergenic
CACTCAAACCACCAAGATCT+AGG 0.452324 1:-55346253 None:intergenic
GTTTCAGACTCCTTCAGCAA+TGG 0.453494 1:+55349399 MsG0180003034.01.T01:CDS
TTGTCTTGCTCTAAAACTGC+TGG 0.453572 1:+55347590 MsG0180003034.01.T01:CDS
GATTGAAGCATATCCCTACT+TGG 0.455034 1:-55348668 None:intergenic
AAAGACGGGAATGAGCTTGA+TGG 0.455305 1:+55346612 MsG0180003034.01.T01:CDS
GCCTCCTCCACCACAGGCAT+CGG 0.458097 1:-55344435 None:intergenic
TCTAGTGCCACATGAAGAAT+GGG 0.459060 1:-55350050 None:intergenic
ATGAAAGTCTGGCAGTATGC+AGG 0.459230 1:-55344523 None:intergenic
GATGAGCCTAATTTATCAAA+TGG 0.460328 1:+55348032 MsG0180003034.01.T01:CDS
TTAGAGAGAGAAAGAGAGAA+GGG 0.460771 1:-55343047 None:intergenic
CATCAAACCATTTGCGGGAG+CGG 0.461626 1:-55349455 None:intergenic
TCATCCAGTTGCCAGAGGTA+AGG 0.462538 1:+55349615 MsG0180003034.01.T01:CDS
CAATGTATCACATGAAAGTC+TGG 0.463122 1:-55344534 None:intergenic
CCGTGGTAGTAAGTATAATC+AGG 0.464251 1:+55348589 MsG0180003034.01.T01:CDS
GCTTCATTACCCTCCGAGCT+TGG 0.466212 1:+55346279 MsG0180003034.01.T01:CDS
ATTCCGGACCCCATTGGAAG+TGG 0.467217 1:-55344164 None:intergenic
ACTTCTTGAGGAAGAAGAAA+AGG 0.471219 1:+55347782 MsG0180003034.01.T01:CDS
GAGAAAACTCATATTGCAAA+TGG 0.471358 1:+55349193 MsG0180003034.01.T01:CDS
GTTCAATCCACTGATTCCTC+TGG 0.471959 1:-55348354 None:intergenic
TTGGGCTACAACTGCAAGAA+TGG 0.472479 1:-55348484 None:intergenic
CATCACTTTGAGTGGGCTGT+GGG 0.473246 1:+55346158 MsG0180003034.01.T01:CDS
CATTCTTCATGTGGCACTAG+AGG 0.473734 1:+55350052 MsG0180003034.01.T01:three_prime_UTR
GATTGTATCATCACTTTGAG+TGG 0.473991 1:+55346150 MsG0180003034.01.T01:CDS
GTGGATCGTCCACTTCCAAT+GGG 0.475104 1:+55344155 MsG0180003034.01.T01:CDS
AATGGTTGTGTCCAAGTCAA+TGG 0.476598 1:+55346230 MsG0180003034.01.T01:CDS
TGATACTGCCTTTCAGTATG+AGG 0.477368 1:+55345962 MsG0180003034.01.T01:CDS
CATCCAGTTGCCAGAGGTAA+GGG 0.480147 1:+55349616 MsG0180003034.01.T01:CDS
TTTCATCTCCCGACTACCTC+TGG 0.480270 1:-55348519 None:intergenic
GCTGTCGCCACAAGCTCGGC+AGG 0.481779 1:+55343943 MsG0180003034.01.T01:CDS
TATCCCGATGCCTGTGGTGG+AGG 0.482750 1:+55344431 MsG0180003034.01.T01:CDS
GAATTTGAATTGATGTGAAT+CGG 0.483585 1:-55343129 None:intergenic
TGTATGTTTCGGTTTGGCAT+TGG 0.484218 1:-55349367 None:intergenic
CCTCCTCCACCACAGGCATC+GGG 0.484640 1:-55344434 None:intergenic
CCAAATAACTATTTATATGC+TGG 0.484699 1:+55349490 MsG0180003034.01.T01:CDS
TGATAAACTGGAATAGCTGC+AGG 0.485371 1:-55349595 None:intergenic
TCATCACTTTGAGTGGGCTG+TGG 0.487828 1:+55346157 MsG0180003034.01.T01:CDS
AAACCATTTGCGGGAGCGGT+TGG 0.488758 1:-55349451 None:intergenic
AAGAATCGTGATGATGTTGT+TGG 0.488839 1:+55343234 MsG0180003034.01.T01:CDS
GCTGAAGGAGTCTGAAACAC+AGG 0.489509 1:-55349394 None:intergenic
AAAATCAATGGTCGAAATGT+TGG 0.489936 1:+55348401 MsG0180003034.01.T01:CDS
GCCACGGCCTCCTCCACCAC+AGG 0.490159 1:-55344441 None:intergenic
TTGAGGTGTTGATTGTTGTA+AGG 0.492513 1:-55349566 None:intergenic
TTCAGAAAATGGAGGAGGGA+TGG 0.492543 1:+55348283 MsG0180003034.01.T01:CDS
TGGAACAACCCTTTCTGCAA+TGG 0.493374 1:-55349704 None:intergenic
AAATGATCTTGCATGGATGC+TGG 0.494429 1:-55349673 None:intergenic
TTTACGGCTTCAGGAGAGCT+AGG 0.496796 1:-55347936 None:intergenic
TACAGTTATATTCAAAGAGC+AGG 0.498153 1:+55346704 MsG0180003034.01.T01:CDS
GAGAACCTCGTTGCACCAGC+TGG 0.498195 1:+55345928 MsG0180003034.01.T01:CDS
CGTCCACTTCCAATGGGGTC+CGG 0.498591 1:+55344161 MsG0180003034.01.T01:CDS
AAGATCATTCTGACAGCCTT+CGG 0.498883 1:-55348876 None:intergenic
TATCTCAGTTTGATCCGGTC+AGG 0.498894 1:+55348780 MsG0180003034.01.T01:CDS
CTTCACTGTGGAAACTATAT+GGG 0.499440 1:+55350317 MsG0180003034.01.T01:three_prime_UTR
ATGACTCGATTCAAGCTGAT+TGG 0.502547 1:+55346102 MsG0180003034.01.T01:CDS
ATGGCGCACGTGCTAGGGAG+CGG 0.503590 1:+55344393 MsG0180003034.01.T01:CDS
TTTAGAGAGAGAAAGAGAGA+AGG 0.503850 1:-55343048 None:intergenic
GAAAATGGAGGAGGGATGGT+AGG 0.504695 1:+55348287 MsG0180003034.01.T01:CDS
GGTGGATCGTCCACTTCCAA+TGG 0.506611 1:+55344154 MsG0180003034.01.T01:CDS
ACAATCTCTTCTAAGGATGA+AGG 0.509356 1:+55344592 MsG0180003034.01.T01:CDS
TGCAGGTTAATTGTAGGGGA+TGG 0.513694 1:+55346371 MsG0180003034.01.T01:CDS
TAGCTCTCCTGAAGCCGTAA+AGG 0.514933 1:+55347938 MsG0180003034.01.T01:CDS
ATGATTTGATGGACAAAGAC+GGG 0.515822 1:+55346598 MsG0180003034.01.T01:CDS
TAAAAGAAAGGTGACTGTTG+TGG 0.515901 1:+55350018 MsG0180003034.01.T01:exon
ATGTTTCGGTTTGGCATTGG+AGG 0.517783 1:-55349364 None:intergenic
CCCAAAGGCAGAGTCTTCTC+AGG 0.517851 1:+55348638 MsG0180003034.01.T01:CDS
ATGGTGAGGGTCTGTCAAGC+AGG 0.517973 1:+55349212 MsG0180003034.01.T01:CDS
AGTTTCCTTGTGGAAGACCC+GGG 0.518042 1:+55344110 MsG0180003034.01.T01:CDS
TGTCTTCAAAGTGGTCTGAC+AGG 0.518388 1:+55348243 MsG0180003034.01.T01:CDS
GTGAGCTGTCGCCACAAGCT+CGG 0.519178 1:+55343939 MsG0180003034.01.T01:CDS
TGGCGCACGTGCTAGGGAGC+GGG 0.519437 1:+55344394 MsG0180003034.01.T01:CDS
AAATTATCTCCATAGTGTCT+TGG 0.519570 1:-55348320 None:intergenic
ACGTGCTAGGGAGCGGGAAA+GGG 0.519583 1:+55344400 MsG0180003034.01.T01:CDS
TTACTGAATTGGGGTAATCC+TGG 0.520154 1:-55343198 None:intergenic
AAAGGGCATCAAACCATTTG+CGG 0.520738 1:-55349461 None:intergenic
CCATCAGTTCATCCTTGGGG+AGG 0.521219 1:+55344199 MsG0180003034.01.T01:CDS
TTATTGAGAGACTCATGTAC+AGG 0.521913 1:+55344624 MsG0180003034.01.T01:CDS
AAGAGTTCCTGCCGAGCTTG+TGG 0.522449 1:-55343950 None:intergenic
TCAATGAATCCATTGCAGAA+AGG 0.522475 1:+55349695 MsG0180003034.01.T01:CDS
GGCCATCTAATTTCCAAGCT+CGG 0.522597 1:-55346292 None:intergenic
AAACTGCAGTCGATACATCT+AGG 0.522601 1:+55348558 MsG0180003034.01.T01:CDS
AGAGGAGTACAATTTGTTTG+CGG 0.522677 1:+55349966 MsG0180003034.01.T01:CDS
CCAAACATTTGCTGATACTG+TGG 0.523867 1:+55346127 MsG0180003034.01.T01:CDS
CCTCCCCAAGGATGAACTGA+TGG 0.524030 1:-55344199 None:intergenic
AAATTGAATTGCAAAATGCC+AGG 0.524063 1:+55343180 MsG0180003034.01.T01:exon
AATTTCATTCCGGACCCCAT+TGG 0.527727 1:-55344170 None:intergenic
ATTTGATGGCGCACGTGCTA+GGG 0.528667 1:+55344388 MsG0180003034.01.T01:CDS
CAAGATCTAGGCCATTGACT+TGG 0.528989 1:-55346241 None:intergenic
TCTCAGGCAACTATCCAAGT+AGG 0.529172 1:+55348654 MsG0180003034.01.T01:CDS
TTCATTGAAATGATCTTGCA+TGG 0.529797 1:-55349680 None:intergenic
AGCCAAGGAATAGTGAGTTA+TGG 0.530376 1:+55344470 MsG0180003034.01.T01:CDS
TTCAGTCCCCATTCTTCATG+TGG 0.530777 1:+55350043 MsG0180003034.01.T01:three_prime_UTR
GAGAGAGAAAGAGAGAAGGG+TGG 0.531800 1:-55343044 None:intergenic
GGTTATGTTACAATCACAAA+AGG 0.532345 1:+55346392 MsG0180003034.01.T01:CDS
GGATTACCCCAATTCAGTAA+TGG 0.533489 1:+55343201 MsG0180003034.01.T01:CDS
AGAAAGAGAGAAGGGTGGTG+TGG 0.535004 1:-55343039 None:intergenic
ATGTACTGCTCTAGATGCAA+TGG 0.536474 1:+55344016 MsG0180003034.01.T01:CDS
GCAGCTAATTCCAGAAAAGC+AGG 0.537208 1:+55349730 MsG0180003034.01.T01:CDS
GATGTTACGTTGAGGTCCAC+AGG 0.539187 1:+55348752 MsG0180003034.01.T01:CDS
GAAATTCTCGAGCAAGTTCA+GGG 0.539843 1:-55346668 None:intergenic
ACTTTCATGTGATACATTGG+TGG 0.542582 1:+55344538 MsG0180003034.01.T01:CDS
ACCGTTACTCTCTTGTGACT+TGG 0.542887 1:-55349785 None:intergenic
TCAAGTATCTCAGTTTGATC+CGG 0.545536 1:+55348775 MsG0180003034.01.T01:CDS
AAAGGAAAGACTAAAAGGAA+AGG 0.546956 1:+55347872 MsG0180003034.01.T01:CDS
GTTGTTTCAGAAAATGGAGG+AGG 0.548056 1:+55348278 MsG0180003034.01.T01:CDS
ATTCTTTGAGCATGCTGAAG+AGG 0.551180 1:+55346430 MsG0180003034.01.T01:CDS
TGGGCTGTGGGGACAAATGA+AGG 0.551733 1:+55346170 MsG0180003034.01.T01:CDS
ATAGTTATTTGGGTGTACAA+AGG 0.552551 1:-55349479 None:intergenic
ATTGTATCATCACTTTGAGT+GGG 0.555118 1:+55346151 MsG0180003034.01.T01:CDS
GTCAATGGCCTAGATCTTGG+TGG 0.555223 1:+55346245 MsG0180003034.01.T01:CDS
CTCAGGCAACTATCCAAGTA+GGG 0.556672 1:+55348655 MsG0180003034.01.T01:CDS
TTCAGGTTGAGAACAAACAT+TGG 0.558555 1:-55349332 None:intergenic
TTCACTTTCTACTACATCCA+AGG 0.559526 1:-55349251 None:intergenic
TCATCAACAGGCGACCTGAC+CGG 0.559642 1:-55348794 None:intergenic
TGTGCTTATGATGACTATGA+TGG 0.559917 1:+55348119 MsG0180003034.01.T01:CDS
AACTCATATTGCAAATGGTG+AGG 0.560002 1:+55349198 MsG0180003034.01.T01:CDS
GTGAGTTATGGTAGAGGACA+TGG 0.562055 1:+55344482 MsG0180003034.01.T01:CDS
TTTGCAGACCAAACTTCTTG+AGG 0.566354 1:+55347770 MsG0180003034.01.T01:intron
CATGTGGCACTAGAGGTTTG+AGG 0.566524 1:+55350059 MsG0180003034.01.T01:three_prime_UTR
TATTTATTGAGTGATTCTGT+AGG 0.568652 1:-55348707 None:intergenic
TTCCTCAGATCCAATTTCTG+TGG 0.569279 1:-55348927 None:intergenic
AAGAAGAAGAGCGCAAAGAG+AGG 0.569554 1:+55347814 MsG0180003034.01.T01:CDS
GAGCTTGGAAATTAGATGGC+CGG 0.569563 1:+55346294 MsG0180003034.01.T01:CDS
ATATCAGGTTTGATAGCAAG+AGG 0.571857 1:+55345835 MsG0180003034.01.T01:intron
GCAGGTGTTCAGTTTCCTTG+TGG 0.572055 1:+55344100 MsG0180003034.01.T01:CDS
TCTGGCAGTATGCAGGGCAC+AGG 0.573351 1:-55344516 None:intergenic
TTCCTTGGCTTATCCAGCCA+CGG 0.573474 1:-55344457 None:intergenic
AGTTCTATAGTTCCAACTAC+CGG 0.575786 1:+55348441 MsG0180003034.01.T01:CDS
CTTTATCCCGATGCCTGTGG+TGG 0.577288 1:+55344428 MsG0180003034.01.T01:CDS
CCATACTGCAAGCAGAAGCG+TGG 0.577398 1:-55349541 None:intergenic
GATCTTGATGCAGAAGCTGA+AGG 0.577598 1:+55348893 MsG0180003034.01.T01:CDS
GAGAGTAGTGGAAGACCCAA+AGG 0.578999 1:+55348623 MsG0180003034.01.T01:CDS
TGAAAGTCTGGCAGTATGCA+GGG 0.579189 1:-55344522 None:intergenic
GTAGACATGCATGAGAGTAG+TGG 0.580621 1:+55348611 MsG0180003034.01.T01:CDS
CTTTCTACTACATCCAAGGA+TGG 0.581768 1:-55349247 None:intergenic
TGTCTGACTGTTGTGAACTT+GGG 0.581986 1:+55349167 MsG0180003034.01.T01:CDS
TACAATTATAAGTCTAAGAG+AGG 0.582011 1:+55350244 MsG0180003034.01.T01:three_prime_UTR
AACTGAATTCTTGCATGTAA+GGG 0.582348 1:-55348000 None:intergenic
GTAGAGTGACCAGAGGTAGT+CGG 0.583373 1:+55348510 MsG0180003034.01.T01:CDS
GAAAGAGACTGCTTTCATAG+AGG 0.583426 1:+55349948 MsG0180003034.01.T01:CDS
ATATTGCATATGAACATGAC+AGG 0.583990 1:+55348144 MsG0180003034.01.T01:CDS
TGCAGTTTCAGACTTACTGA+CGG 0.584190 1:-55348543 None:intergenic
CAAACATTTGCTGATACTGT+GGG 0.584942 1:+55346128 MsG0180003034.01.T01:CDS
ATGGTAGAGGACATGGAACA+AGG 0.585778 1:+55344489 MsG0180003034.01.T01:CDS
CAGACTTTCATGTGATACAT+TGG 0.589372 1:+55344535 MsG0180003034.01.T01:CDS
TCTTGGATATAACTTAAATG+AGG 0.589835 1:+55349516 MsG0180003034.01.T01:CDS
TGAAGAGGCGGAAGAAGAAG+AGG 0.590841 1:+55346445 MsG0180003034.01.T01:CDS
CTCCACAGAAATTGGATCTG+AGG 0.592810 1:+55348925 MsG0180003034.01.T01:CDS
ATCAGCAACACAAAACCAGC+TGG 0.593072 1:-55345943 None:intergenic
AGTTCAACCTGCGTTGACAA+TGG 0.593481 1:+55349142 MsG0180003034.01.T01:CDS
GGAAAATCTTTGCAGCCAGA+AGG 0.596439 1:+55344076 MsG0180003034.01.T01:CDS
TGGTAGTAACCCATTGCTGA+AGG 0.596525 1:-55349409 None:intergenic
AGGTTTGACGACAACGCGTG+AGG 0.596996 1:+55344219 MsG0180003034.01.T01:CDS
AATAATTCTGATCACAGTCA+AGG 0.600087 1:+55348983 MsG0180003034.01.T01:CDS
GGCCGTGGCTGGATAAGCCA+AGG 0.601468 1:+55344455 MsG0180003034.01.T01:CDS
GATGATTTGATGGACAAAGA+CGG 0.603027 1:+55346597 MsG0180003034.01.T01:CDS
ATAGCTGCAGGGTTAAATTG+AGG 0.605333 1:-55349583 None:intergenic
CAAAATCCATTACTGAATTG+GGG 0.605750 1:-55343207 None:intergenic
TGCTCGTCATGTCTAAGCGA+GGG 0.607535 1:+55349028 MsG0180003034.01.T01:CDS
ACTCATATTGCAAATGGTGA+GGG 0.608838 1:+55349199 MsG0180003034.01.T01:CDS
TTGTATTCAAAGTCTCTGAA+AGG 0.609501 1:+55344268 MsG0180003034.01.T01:CDS
CATTTAAGTTATATCCAAGA+GGG 0.609502 1:-55349513 None:intergenic
CTTTGAGCATGCTGAAGAGG+CGG 0.610009 1:+55346433 MsG0180003034.01.T01:CDS
ACATTGCAGGTTAATTGTAG+GGG 0.610909 1:+55346367 MsG0180003034.01.T01:CDS
TCTTTGCAGCCAGAAGGAGC+AGG 0.611845 1:+55344082 MsG0180003034.01.T01:CDS
GGAATAGTGAGTTATGGTAG+AGG 0.612486 1:+55344476 MsG0180003034.01.T01:CDS
GTTTCCTTGTGGAAGACCCG+GGG 0.612637 1:+55344111 MsG0180003034.01.T01:CDS
AAGTCGATATGTCTTCAAAG+TGG 0.612990 1:+55348234 MsG0180003034.01.T01:CDS
AAGAGAAATGGAATGACCGA+AGG 0.614677 1:+55348860 MsG0180003034.01.T01:CDS
ATCTAATTTCCAAGCTCGGA+GGG 0.615126 1:-55346288 None:intergenic
TCTTGCTCTAAAACTGCTGG+AGG 0.618084 1:+55347593 MsG0180003034.01.T01:CDS
GGTTTGACGACAACGCGTGA+GGG 0.618789 1:+55344220 MsG0180003034.01.T01:CDS
CAGAAAAGCAGGACTGAATG+GGG 0.621520 1:+55349741 MsG0180003034.01.T01:CDS
CTGCTTTATCCCGATGCCTG+TGG 0.626984 1:+55344425 MsG0180003034.01.T01:CDS
ACTTGGCAGAATTACTGAGT+CGG 0.627486 1:-55349768 None:intergenic
GCATATGAACATGACAGGAA+TGG 0.627820 1:+55348149 MsG0180003034.01.T01:CDS
TGGTAGAGGACATGGAACAA+GGG 0.629090 1:+55344490 MsG0180003034.01.T01:CDS
TTGTTTCAGAAAATGGAGGA+GGG 0.633072 1:+55348279 MsG0180003034.01.T01:CDS
CTGCTCGTCATGTCTAAGCG+AGG 0.634685 1:+55349027 MsG0180003034.01.T01:CDS
GCAGTTGTTTCAGAAAATGG+AGG 0.639766 1:+55348275 MsG0180003034.01.T01:CDS
ACATCTTCCAGAGGAATCAG+TGG 0.641928 1:+55348347 MsG0180003034.01.T01:CDS
GTTTATCATCCAGTTGCCAG+AGG 0.644068 1:+55349610 MsG0180003034.01.T01:CDS
AAGCTCGGCAGGAACTCTTG+AGG 0.646298 1:+55343954 MsG0180003034.01.T01:CDS
TAACACAAAATTCAGTACAC+CGG 0.646529 1:-55346313 None:intergenic
GAGACACACCTCATACTGAA+AGG 0.650100 1:-55345970 None:intergenic
CATCTAATTTCCAAGCTCGG+AGG 0.650138 1:-55346289 None:intergenic
TCATTTAAGTTATATCCAAG+AGG 0.659223 1:-55349514 None:intergenic
CATACTGCAAGCAGAAGCGT+GGG 0.660530 1:-55349540 None:intergenic
AAACTGAGATACTTGACCTG+TGG 0.663935 1:-55348768 None:intergenic
CCTGATTATACTTACTACCA+CGG 0.664287 1:-55348589 None:intergenic
ATCACTTTGAGTGGGCTGTG+GGG 0.666477 1:+55346159 MsG0180003034.01.T01:CDS
TCTTGTCTCCTCACCCAGTG+CGG 0.668973 1:-55344570 None:intergenic
GCCAAGTCACAAGAGAGTAA+CGG 0.670660 1:+55349784 MsG0180003034.01.T01:CDS
TGTGGACCTCAACGTAACAT+CGG 0.676148 1:-55348750 None:intergenic
AATTTCGGAACATCTTCCAG+AGG 0.680506 1:+55348338 MsG0180003034.01.T01:CDS
CAGGTTGAGAACAAACATTG+GGG 0.680917 1:-55349330 None:intergenic
GCTGGAATAGAAATTTGACT+CGG 0.684747 1:-55349655 None:intergenic
GATAAACTGGAATAGCTGCA+GGG 0.685257 1:-55349594 None:intergenic
AGACACGCCATTGTCAACGC+AGG 0.691218 1:-55349149 None:intergenic
TGGATCGTCCACTTCCAATG+GGG 0.693474 1:+55344156 MsG0180003034.01.T01:CDS
CAGACTCCGATGTTACGTTG+AGG 0.695237 1:+55348744 MsG0180003034.01.T01:CDS
GTTGTCGTCAAACCTCCCCA+AGG 0.695296 1:-55344211 None:intergenic
CCAAACAGTAGAGTGACCAG+AGG 0.700399 1:+55348503 MsG0180003034.01.T01:CDS
AACCTGAAATAAGTGTGACG+AGG 0.701455 1:+55348948 MsG0180003034.01.T01:CDS
AAACCAAAGCTGCTTCACTG+TGG 0.704508 1:+55350305 MsG0180003034.01.T01:three_prime_UTR
AGGTTGAGAACAAACATTGG+GGG 0.704530 1:-55349329 None:intergenic
GATCCATCAGTTCATCCTTG+GGG 0.706184 1:+55344196 MsG0180003034.01.T01:CDS
TTTCCTTGTGGAAGACCCGG+GGG 0.714864 1:+55344112 MsG0180003034.01.T01:CDS
CAAAACCAGCTGGTGCAACG+AGG 0.734008 1:-55345933 None:intergenic
AAGTCACAAGAGAGTAACGG+TGG 0.734129 1:+55349787 MsG0180003034.01.T01:CDS
CTAGTGCCACATGAAGAATG+GGG 0.762928 1:-55350049 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATGTAAATATTCATAAA+AGG - Chr1:55346782-55346801 None:intergenic 10.0%
!! TATATTATATATAAGTACTT+TGG - Chr1:55345217-55345236 None:intergenic 10.0%
!!! ATTTATTTGATTTTATTATC+TGG + Chr1:55343335-55343354 MsG0180003034.01.T01:intron 10.0%
!!! TTTATTTGATTTTATTATCT+GGG + Chr1:55343336-55343355 MsG0180003034.01.T01:intron 10.0%
!! ACATGAAAATGAAAAAAAAT+TGG - Chr1:55350282-55350301 None:intergenic 15.0%
!! ATATCATATATTTAGCATTT+AGG - Chr1:55347749-55347768 None:intergenic 15.0%
!! TACAATTGAAAAAATAACAA+TGG - Chr1:55343635-55343654 None:intergenic 15.0%
!! TCATAAATTATATTTGCTTT+GGG - Chr1:55347431-55347450 None:intergenic 15.0%
!!! AAAAACCATTTTCAAAATTT+TGG - Chr1:55349306-55349325 None:intergenic 15.0%
!!! AAAACCATTTTCAAAATTTT+GGG - Chr1:55349305-55349324 None:intergenic 15.0%
!!! AATTTGTTAATTAATGCAAA+TGG - Chr1:55347138-55347157 None:intergenic 15.0%
!!! ACATTATCTTTTGAATTTTT+TGG + Chr1:55346795-55346814 MsG0180003034.01.T01:intron 15.0%
!!! ATCAATTTTAACACAAAAAT+TGG - Chr1:55343294-55343313 None:intergenic 15.0%
!!! ATTATTTTAACATTGTAGAA+TGG - Chr1:55344938-55344957 None:intergenic 15.0%
!!! GAATTTTTAAATCATTTACA+AGG + Chr1:55346524-55346543 MsG0180003034.01.T01:intron 15.0%
!!! TAACTTTTATAAATACTCAA+TGG - Chr1:55343579-55343598 None:intergenic 15.0%
!!! TACTAATTTTTATAATCTAG+TGG - Chr1:55344724-55344743 None:intergenic 15.0%
!! AAAATGAAAAAAAATTGGCA+TGG - Chr1:55350277-55350296 None:intergenic 20.0%
!! AAATACACATATATTAAGTG+AGG + Chr1:55345491-55345510 MsG0180003034.01.T01:intron 20.0%
!! AATGTAATGAACCAAATAAA+AGG - Chr1:55344849-55344868 None:intergenic 20.0%
!! ATCTCCAAATAAATTATTGT+TGG - Chr1:55347213-55347232 None:intergenic 20.0%
!! ATGACCAACAATAATTTATT+TGG + Chr1:55347206-55347225 MsG0180003034.01.T01:intron 20.0%
!! ATGTAAATATTCATAAAAGG+TGG - Chr1:55346779-55346798 None:intergenic 20.0%
!! ATTTATTTGGAGATAAAATC+TGG + Chr1:55347219-55347238 MsG0180003034.01.T01:intron 20.0%
!! CAGCATATAAATAGTTATTT+GGG - Chr1:55349492-55349511 None:intergenic 20.0%
!! CCAAAAAAAATAACAAAGAA+CGG - Chr1:55345402-55345421 None:intergenic 20.0%
!! GCTTATTATCAATTCATATA+TGG + Chr1:55345078-55345097 MsG0180003034.01.T01:intron 20.0%
!! GGTTTCAAAAATCAAAATAA+CGG + Chr1:55344133-55344152 MsG0180003034.01.T01:CDS 20.0%
!! GTCATAAATTATATTTGCTT+TGG - Chr1:55347432-55347451 None:intergenic 20.0%
!! GTTAATATCTTATATTCAGT+AGG + Chr1:55345184-55345203 MsG0180003034.01.T01:intron 20.0%
!! TAAAATAACTAACAGACATT+TGG + Chr1:55343791-55343810 MsG0180003034.01.T01:intron 20.0%
!! TAAATCTGTTATGATTTCAT+TGG + Chr1:55346008-55346027 MsG0180003034.01.T01:intron 20.0%
!! TATCAAAGTTAAAGGATATA+TGG + Chr1:55346834-55346853 MsG0180003034.01.T01:intron 20.0%
!! TATCAATTCATATATGGTAT+TGG + Chr1:55345084-55345103 MsG0180003034.01.T01:intron 20.0%
!! TCAATGATTATCAAAGTTAA+AGG + Chr1:55346826-55346845 MsG0180003034.01.T01:intron 20.0%
!! TTTAAAAATTCCATGAACTT+TGG - Chr1:55346515-55346534 None:intergenic 20.0%
!! TTTGTTAGCATTTATTTATG+TGG + Chr1:55343847-55343866 MsG0180003034.01.T01:intron 20.0%
!!! ACTTGTTTATTTTGTATTCT+TGG + Chr1:55345431-55345450 MsG0180003034.01.T01:intron 20.0%
!!! ATATATGTGTATTTGCTAAA+AGG - Chr1:55345485-55345504 None:intergenic 20.0%
!!! ATATGAATTGATAATAAGCA+TGG - Chr1:55345077-55345096 None:intergenic 20.0%
!!! ATCTTTGATTGTTTGATAAT+TGG + Chr1:55343481-55343500 MsG0180003034.01.T01:intron 20.0%
!!! ATTCAATTTTGATGCAAAAA+TGG - Chr1:55343169-55343188 None:intergenic 20.0%
!!! ATTTTGGAATTTGAAAATGT+TGG + Chr1:55346203-55346222 MsG0180003034.01.T01:CDS 20.0%
!!! GTTTTTTGTTTTTGAAAACT+CGG + Chr1:55343667-55343686 MsG0180003034.01.T01:intron 20.0%
!!! TATAGAAGAATGATTTTCTT+TGG + Chr1:55345620-55345639 MsG0180003034.01.T01:intron 20.0%
!!! TTACGAGTATTATTCAATTT+TGG + Chr1:55346939-55346958 MsG0180003034.01.T01:intron 20.0%
!!! TTCACAATTTTCTAAAAGAA+AGG + Chr1:55350006-55350025 MsG0180003034.01.T01:exon 20.0%
!!! TTCCATTTGATTTGAAATAA+AGG + Chr1:55347274-55347293 MsG0180003034.01.T01:intron 20.0%
!!! TTTTTGCAAATTGTTATGTA+TGG + Chr1:55344055-55344074 MsG0180003034.01.T01:CDS 20.0%
!!! TTTTTTCAATTGTAAAGCAT+TGG + Chr1:55343641-55343660 MsG0180003034.01.T01:intron 20.0%
! AAATGAATACGACAAATGAA+TGG + Chr1:55346898-55346917 MsG0180003034.01.T01:intron 25.0%
! AAATGTTATACGAGAATTCA+AGG + Chr1:55345878-55345897 MsG0180003034.01.T01:CDS 25.0%
! AAGTATAATAACAAGACAGA+TGG - Chr1:55347726-55347745 None:intergenic 25.0%
! AAGTTTACCTTCTATATATC+AGG + Chr1:55345820-55345839 MsG0180003034.01.T01:intron 25.0%
! AATACCCTCAAAATAATAGA+AGG - Chr1:55345598-55345617 None:intergenic 25.0%
! ACATCAATTCAAATTCAATC+TGG + Chr1:55343136-55343155 MsG0180003034.01.T01:five_prime_UTR 25.0%
! CAAATATTCTCAATTGAGAA+TGG - Chr1:55345288-55345307 None:intergenic 25.0%
! CCAAATAACTATTTATATGC+TGG + Chr1:55349490-55349509 MsG0180003034.01.T01:CDS 25.0%
! CCAGCATATAAATAGTTATT+TGG - Chr1:55349493-55349512 None:intergenic 25.0%
! GAATTTGAATTGATGTGAAT+CGG - Chr1:55343132-55343151 None:intergenic 25.0%
! GGAAAGGATAAAAATAAAGA+AGG + Chr1:55347888-55347907 MsG0180003034.01.T01:CDS 25.0%
! GTAAATGTTCCAAAAATCAA+TGG + Chr1:55348389-55348408 MsG0180003034.01.T01:CDS 25.0%
! GTAACATTGTATGAAATAGT+TGG + Chr1:55346042-55346061 MsG0180003034.01.T01:intron 25.0%
! TAATCGCCATTTGATAAATT+AGG - Chr1:55348041-55348060 None:intergenic 25.0%
! TAATTACCATTCATACTCAA+TGG - Chr1:55343602-55343621 None:intergenic 25.0%
! TACAATTATAAGTCTAAGAG+AGG + Chr1:55350244-55350263 MsG0180003034.01.T01:three_prime_UTR 25.0%
! TATCAAACCTGATATATAGA+AGG - Chr1:55345830-55345849 None:intergenic 25.0%
! TATTTATTGAGTGATTCTGT+AGG - Chr1:55348710-55348729 None:intergenic 25.0%
! TCTTATATTCAGTAGGTATA+TGG + Chr1:55345191-55345210 MsG0180003034.01.T01:intron 25.0%
! TCTTGGATATAACTTAAATG+AGG + Chr1:55349516-55349535 MsG0180003034.01.T01:CDS 25.0%
! TTAGAAAATTGTGAACCTTA+AGG - Chr1:55350001-55350020 None:intergenic 25.0%
! TTCAAAAATCAAAATAACGG+TGG + Chr1:55344136-55344155 MsG0180003034.01.T01:CDS 25.0%
! TTTGAAAATGTTGGAACAAA+TGG + Chr1:55346212-55346231 MsG0180003034.01.T01:CDS 25.0%
!! AAAATTTTCGACATTATGCT+TGG + Chr1:55345536-55345555 MsG0180003034.01.T01:intron 25.0%
!! AATCATATTTTTCACTCATC+CGG - Chr1:55348463-55348482 None:intergenic 25.0%
!! CACCTTTATTTCAAATCAAA+TGG - Chr1:55347279-55347298 None:intergenic 25.0%
!! CATTTAAGTTATATCCAAGA+GGG - Chr1:55349516-55349535 None:intergenic 25.0%
!! TAGGCTAAAACATAATTTGT+TGG + Chr1:55347383-55347402 MsG0180003034.01.T01:intron 25.0%
!! TATCTCTTACTTCGTATTTT+TGG - Chr1:55349123-55349142 None:intergenic 25.0%
!! TCATTACATTGAATGCATTT+TGG + Chr1:55344859-55344878 MsG0180003034.01.T01:intron 25.0%
!! TCATTTAAGTTATATCCAAG+AGG - Chr1:55349517-55349536 None:intergenic 25.0%
!! TTGAGAATTCTGTATTTTCA+CGG - Chr1:55349078-55349097 None:intergenic 25.0%
!! TTGTTTAAAATCATGATGCT+GGG - Chr1:55347251-55347270 None:intergenic 25.0%
!! TTTGTTTAAAATCATGATGC+TGG - Chr1:55347252-55347271 None:intergenic 25.0%
!!! CCGTTCTTTGTTATTTTTTT+TGG + Chr1:55345399-55345418 MsG0180003034.01.T01:intron 25.0%
!!! GGTTTTTCCTTATTTCATTT+TGG + Chr1:55349808-55349827 MsG0180003034.01.T01:CDS 25.0%
!!! GTTAGATCGTTATTTTGTAT+TGG + Chr1:55343364-55343383 MsG0180003034.01.T01:intron 25.0%
!!! TAATTAATGCAAATGGATTG+AGG - Chr1:55347131-55347150 None:intergenic 25.0%
!!! TACATGCTGATTTGAAATAA+AGG + Chr1:55347325-55347344 MsG0180003034.01.T01:intron 25.0%
!!! TGTTTATTTTTGTCTAGTTC+TGG + Chr1:55343915-55343934 MsG0180003034.01.T01:intron 25.0%
!!! TTTCCTTATTTCATTTTGGT+GGG + Chr1:55349812-55349831 MsG0180003034.01.T01:CDS 25.0%
!!! TTTGATTTTATTATCTGGGT+TGG + Chr1:55343340-55343359 MsG0180003034.01.T01:intron 25.0%
!!! TTTTCCTTATTTCATTTTGG+TGG + Chr1:55349811-55349830 MsG0180003034.01.T01:CDS 25.0%
AAAAAGTTAAGCTACAAGAC+AGG - Chr1:55344356-55344375 None:intergenic 30.0%
AAAAGTTAAGCTACAAGACA+GGG - Chr1:55344355-55344374 None:intergenic 30.0%
AAAATCAATGGTCGAAATGT+TGG + Chr1:55348401-55348420 MsG0180003034.01.T01:CDS 30.0%
AAAGGAAAGACTAAAAGGAA+AGG + Chr1:55347872-55347891 MsG0180003034.01.T01:CDS 30.0%
AAAGGACGAAAACAAATTTC+AGG + Chr1:55344883-55344902 MsG0180003034.01.T01:intron 30.0%
AAATTATCTCCATAGTGTCT+TGG - Chr1:55348323-55348342 None:intergenic 30.0%
AAATTGAATTGCAAAATGCC+AGG + Chr1:55343180-55343199 MsG0180003034.01.T01:exon 30.0%
AACTGAATTCTTGCATGTAA+GGG - Chr1:55348003-55348022 None:intergenic 30.0%
AAGTTACCATTGAGTATGAA+TGG + Chr1:55343593-55343612 MsG0180003034.01.T01:intron 30.0%
AATAATTCTGATCACAGTCA+AGG + Chr1:55348983-55349002 MsG0180003034.01.T01:CDS 30.0%
ACACAGGAAATTGTATGTTT+CGG - Chr1:55349381-55349400 None:intergenic 30.0%
ACCAAAATCCATTACTGAAT+TGG - Chr1:55343212-55343231 None:intergenic 30.0%
ACCAATTATACTGTTTCGTA+AGG - Chr1:55346864-55346883 None:intergenic 30.0%
ACCTAAGGAAAATATACTCA+AGG - Chr1:55344791-55344810 None:intergenic 30.0%
ACTGTGATCAGAATTATTCA+TGG - Chr1:55348981-55349000 None:intergenic 30.0%
AGAAGAAAGGAAAGACTAAA+AGG + Chr1:55347867-55347886 MsG0180003034.01.T01:CDS 30.0%
AGACACTATGGAGATAATTT+CGG + Chr1:55348323-55348342 MsG0180003034.01.T01:CDS 30.0%
AGTCTTTGACGATAAAACTT+TGG - Chr1:55348194-55348213 None:intergenic 30.0%
ATACACAAATACAACCATCA+AGG - Chr1:55345760-55345779 None:intergenic 30.0%
ATAGCTTGAGAATAAACTTC+AGG - Chr1:55345665-55345684 None:intergenic 30.0%
ATAGTTATTTGGGTGTACAA+AGG - Chr1:55349482-55349501 None:intergenic 30.0%
ATATTGCATATGAACATGAC+AGG + Chr1:55348144-55348163 MsG0180003034.01.T01:CDS 30.0%
ATCGTCAAAGACTTAGATAT+AGG + Chr1:55348201-55348220 MsG0180003034.01.T01:CDS 30.0%
ATTATACAATGCTTGCTTCT+AGG + Chr1:55346572-55346591 MsG0180003034.01.T01:intron 30.0%
ATTCAACAAGAACCAATCAT+TGG - Chr1:55343401-55343420 None:intergenic 30.0%
ATTCTCAATTGAGAATGGAT+TGG - Chr1:55345283-55345302 None:intergenic 30.0%
ATTGAGATGAAGATGAGATT+TGG - Chr1:55343016-55343035 None:intergenic 30.0%
ATTGTATCATCACTTTGAGT+GGG + Chr1:55346151-55346170 MsG0180003034.01.T01:CDS 30.0%
CAAAATCCATTACTGAATTG+GGG - Chr1:55343210-55343229 None:intergenic 30.0%
CACAAAAAAGACAACAGTTA+AGG - Chr1:55343897-55343916 None:intergenic 30.0%
CCAAAATCCATTACTGAATT+GGG - Chr1:55343211-55343230 None:intergenic 30.0%
CTTAACCAAAATGAATACCT+TGG - Chr1:55345027-55345046 None:intergenic 30.0%
GAGAAAACTCATATTGCAAA+TGG + Chr1:55349193-55349212 MsG0180003034.01.T01:CDS 30.0%
GATAGTGATTTGAAGAGAAA+TGG + Chr1:55348848-55348867 MsG0180003034.01.T01:CDS 30.0%
GATGAGCCTAATTTATCAAA+TGG + Chr1:55348032-55348051 MsG0180003034.01.T01:CDS 30.0%
GCTTCAATCAAAGAAAGTTT+GGG + Chr1:55348682-55348701 MsG0180003034.01.T01:CDS 30.0%
GGTTATGTTACAATCACAAA+AGG + Chr1:55346392-55346411 MsG0180003034.01.T01:CDS 30.0%
GTTAAAGCTCATGCATTAAA+GGG + Chr1:55346332-55346351 MsG0180003034.01.T01:CDS 30.0%
TAACACAAAATTCAGTACAC+CGG - Chr1:55346316-55346335 None:intergenic 30.0%
TACAGTTATATTCAAAGAGC+AGG + Chr1:55346704-55346723 MsG0180003034.01.T01:CDS 30.0%
TACATTGCAGGTTAATTGTA+GGG + Chr1:55346366-55346385 MsG0180003034.01.T01:CDS 30.0%
TAGTTATTTGGGTGTACAAA+GGG - Chr1:55349481-55349500 None:intergenic 30.0%
TCCTTACGAAACAGTATAAT+TGG + Chr1:55346860-55346879 MsG0180003034.01.T01:intron 30.0%
TGCTTCAATCAAAGAAAGTT+TGG + Chr1:55348681-55348700 MsG0180003034.01.T01:CDS 30.0%
TGTTAAAGCTCATGCATTAA+AGG + Chr1:55346331-55346350 MsG0180003034.01.T01:CDS 30.0%
TTAACACACCCTTAAAAGAT+TGG - Chr1:55345169-55345188 None:intergenic 30.0%
TTCATTGAAATGATCTTGCA+TGG - Chr1:55349683-55349702 None:intergenic 30.0%
TTGTATTCAAAGTCTCTGAA+AGG + Chr1:55344268-55344287 MsG0180003034.01.T01:CDS 30.0%
TTTATCTCAAACCAAGGAAT+TGG - Chr1:55347094-55347113 None:intergenic 30.0%
! AATGCAGTTGTTTCAGAAAA+TGG + Chr1:55348272-55348291 MsG0180003034.01.T01:CDS 30.0%
! AATTCCTTGGTTTGAGATAA+AGG + Chr1:55347093-55347112 MsG0180003034.01.T01:intron 30.0%
! ATATCTTTAGAAAGCCTTTG+AGG + Chr1:55345234-55345253 MsG0180003034.01.T01:intron 30.0%
! CTAACTATGTTGATCTTTTC+AGG + Chr1:55347512-55347531 MsG0180003034.01.T01:intron 30.0%
! CTAGACATCCAATCTTTTAA+GGG + Chr1:55345158-55345177 MsG0180003034.01.T01:intron 30.0%
! CTTGTAGTTGACCTTTTATT+TGG + Chr1:55344835-55344854 MsG0180003034.01.T01:intron 30.0%
! GTACTTCAAGTTTCTCATTA+AGG + Chr1:55346467-55346486 MsG0180003034.01.T01:intron 30.0%
! TCTAGACATCCAATCTTTTA+AGG + Chr1:55345157-55345176 MsG0180003034.01.T01:intron 30.0%
! TGAAGGAAAATCAGACATTT+TGG + Chr1:55346187-55346206 MsG0180003034.01.T01:CDS 30.0%
! TGTTTAAAATCATGATGCTG+GGG - Chr1:55347250-55347269 None:intergenic 30.0%
! TGTTTTGCGTTCATTTGAAA+AGG - Chr1:55349845-55349864 None:intergenic 30.0%
! TTCTCAATTGAGAATGGATT+GGG - Chr1:55345282-55345301 None:intergenic 30.0%
!! AAGTGAGGTTTTATGTTCTT+TGG + Chr1:55345506-55345525 MsG0180003034.01.T01:intron 30.0%
!! AATGACCAAGGTATTCATTT+TGG + Chr1:55345019-55345038 MsG0180003034.01.T01:intron 30.0%
!! ACTGCCCAAAATTTTGAAAA+TGG + Chr1:55349298-55349317 MsG0180003034.01.T01:CDS 30.0%
!! AGATTGTGAGTGTATTTTGA+AGG + Chr1:55350193-55350212 MsG0180003034.01.T01:three_prime_UTR 30.0%
!! CATTGAATGCATTTTGGAAA+AGG + Chr1:55344865-55344884 MsG0180003034.01.T01:intron 30.0%
!! GATTGGTTCTTGTTGAATTT+TGG + Chr1:55343403-55343422 MsG0180003034.01.T01:intron 30.0%
!! TGTTGCCTTCTATTATTTTG+AGG + Chr1:55345590-55345609 MsG0180003034.01.T01:intron 30.0%
!! TTTCTGAAACAACTGCATTA+TGG - Chr1:55348271-55348290 None:intergenic 30.0%
!!! ACATTTCGACCATTGATTTT+TGG - Chr1:55348401-55348420 None:intergenic 30.0%
!!! ATTTTGATTTTTGAAACCCC+CGG - Chr1:55344131-55344150 None:intergenic 30.0%
!!! CTGTTTAGTTTATTTTGCAC+TGG + Chr1:55347451-55347470 MsG0180003034.01.T01:intron 30.0%
!!! GGTTAAGTAAGCTAGTTTTA+GGG + Chr1:55345040-55345059 MsG0180003034.01.T01:intron 30.0%
!!! GTTAAGTAAGCTAGTTTTAG+GGG + Chr1:55345041-55345060 MsG0180003034.01.T01:intron 30.0%
!!! GTTGCCTTCTATTATTTTGA+GGG + Chr1:55345591-55345610 MsG0180003034.01.T01:intron 30.0%
!!! TGGTTAAGTAAGCTAGTTTT+AGG + Chr1:55345039-55345058 MsG0180003034.01.T01:intron 30.0%
AAAAAGATTAGTGCATCCAC+AGG + Chr1:55347028-55347047 MsG0180003034.01.T01:intron 35.0%
AAATTTCAGGCTTGAATGCT+TGG + Chr1:55344896-55344915 MsG0180003034.01.T01:intron 35.0%
AACTCATATTGCAAATGGTG+AGG + Chr1:55349198-55349217 MsG0180003034.01.T01:CDS 35.0%
AAGTCGATATGTCTTCAAAG+TGG + Chr1:55348234-55348253 MsG0180003034.01.T01:CDS 35.0%
ACAAATACAACCATCAAGGA+TGG - Chr1:55345756-55345775 None:intergenic 35.0%
ACAAGACAGGGAAAAGAAAA+GGG - Chr1:55344343-55344362 None:intergenic 35.0%
ACAATGAGAGAATACATGCT+AGG + Chr1:55347313-55347332 MsG0180003034.01.T01:intron 35.0%
ACATTGCAGGTTAATTGTAG+GGG + Chr1:55346367-55346386 MsG0180003034.01.T01:CDS 35.0%
ACCATCAAAATCCAGTTTCA+TGG + Chr1:55349428-55349447 MsG0180003034.01.T01:CDS 35.0%
ACGAAACAGTATAATTGGTG+TGG + Chr1:55346865-55346884 MsG0180003034.01.T01:intron 35.0%
ACTCATATTGCAAATGGTGA+GGG + Chr1:55349199-55349218 MsG0180003034.01.T01:CDS 35.0%
ACTGCATCTTCAGACAATAT+TGG + Chr1:55349868-55349887 MsG0180003034.01.T01:CDS 35.0%
ACTTCTTGAGGAAGAAGAAA+AGG + Chr1:55347782-55347801 MsG0180003034.01.T01:CDS 35.0%
ACTTTCATGTGATACATTGG+TGG + Chr1:55344538-55344557 MsG0180003034.01.T01:CDS 35.0%
AGACAAGACAATCTCTTCTA+AGG + Chr1:55344585-55344604 MsG0180003034.01.T01:CDS 35.0%
AGAGGAAAAGAGCAAAAGAA+AGG + Chr1:55347832-55347851 MsG0180003034.01.T01:CDS 35.0%
AGTTCTATAGTTCCAACTAC+CGG + Chr1:55348441-55348460 MsG0180003034.01.T01:CDS 35.0%
ATAACTAACAGACATTTGGC+TGG + Chr1:55343795-55343814 MsG0180003034.01.T01:intron 35.0%
ATCGAAGGTTAACACAGTAT+GGG - Chr1:55344672-55344691 None:intergenic 35.0%
ATGAACTTTGGACATTAGAG+GGG - Chr1:55346503-55346522 None:intergenic 35.0%
ATGAATCACAGATCGAGAAT+TGG - Chr1:55343082-55343101 None:intergenic 35.0%
ATGGATCCTGAATTTCATTC+CGG - Chr1:55344183-55344202 None:intergenic 35.0%
CAACTGAATTCTTGCATGTA+AGG - Chr1:55348004-55348023 None:intergenic 35.0%
CAATGAATCCATTGCAGAAA+GGG + Chr1:55349696-55349715 MsG0180003034.01.T01:CDS 35.0%
CAATGTATCACATGAAAGTC+TGG - Chr1:55344537-55344556 None:intergenic 35.0%
CAGACTTTCATGTGATACAT+TGG + Chr1:55344535-55344554 MsG0180003034.01.T01:CDS 35.0%
CATGAACTTTGGACATTAGA+GGG - Chr1:55346504-55346523 None:intergenic 35.0%
CATTGTAGAATGGACATATG+TGG - Chr1:55344928-55344947 None:intergenic 35.0%
CCTGATTATACTTACTACCA+CGG - Chr1:55348592-55348611 None:intergenic 35.0%
CTTCACTGTGGAAACTATAT+GGG + Chr1:55350317-55350336 MsG0180003034.01.T01:three_prime_UTR 35.0%
GAAGTTAAAAACAAAGCCTG+TGG - Chr1:55347047-55347066 None:intergenic 35.0%
GAATCATCAACTTCATCAAC+AGG - Chr1:55348809-55348828 None:intergenic 35.0%
GAGGAAAAGAGCAAAAGAAA+GGG + Chr1:55347833-55347852 MsG0180003034.01.T01:CDS 35.0%
GATCAAGTCGAAAAAGATCA+TGG + Chr1:55349916-55349935 MsG0180003034.01.T01:CDS 35.0%
GATCATCACATTAGAAAAGC+AGG + Chr1:55347641-55347660 MsG0180003034.01.T01:CDS 35.0%
GATTGTATCATCACTTTGAG+TGG + Chr1:55346150-55346169 MsG0180003034.01.T01:CDS 35.0%
GCTGGAATAGAAATTTGACT+CGG - Chr1:55349658-55349677 None:intergenic 35.0%
GGAAATTGTATGTTTCGGTT+TGG - Chr1:55349376-55349395 None:intergenic 35.0%
GGAGAAAAAGCTTAGAAGAA+AGG + Chr1:55347854-55347873 MsG0180003034.01.T01:CDS 35.0%
GTACATTGCAGGTTAATTGT+AGG + Chr1:55346365-55346384 MsG0180003034.01.T01:CDS 35.0%
GTAGAAAAAGCTTTCAGAGA+GGG + Chr1:55347534-55347553 MsG0180003034.01.T01:CDS 35.0%
TAAAAGAAAGGTGACTGTTG+TGG + Chr1:55350018-55350037 MsG0180003034.01.T01:exon 35.0%
TACAAGACAGGGAAAAGAAA+AGG - Chr1:55344344-55344363 None:intergenic 35.0%
TACCATAACTCACTATTCCT+TGG - Chr1:55344475-55344494 None:intergenic 35.0%
TAGATATTGTTCCTACCTTC+AGG + Chr1:55346073-55346092 MsG0180003034.01.T01:intron 35.0%
TATCGAAGGTTAACACAGTA+TGG - Chr1:55344673-55344692 None:intergenic 35.0%
TCAAGTATCTCAGTTTGATC+CGG + Chr1:55348775-55348794 MsG0180003034.01.T01:CDS 35.0%
TCAATGAATCCATTGCAGAA+AGG + Chr1:55349695-55349714 MsG0180003034.01.T01:CDS 35.0%
TGAATCACAGATCGAGAATT+GGG - Chr1:55343081-55343100 None:intergenic 35.0%
TGTGCTTATGATGACTATGA+TGG + Chr1:55348119-55348138 MsG0180003034.01.T01:CDS 35.0%
TGTTAACCTTCGATAATGCA+GGG + Chr1:55344678-55344697 MsG0180003034.01.T01:intron 35.0%
TTAACTTAACCTCACCTCAA+AGG - Chr1:55345251-55345270 None:intergenic 35.0%
TTAGAGAGAGAAAGAGAGAA+GGG - Chr1:55343050-55343069 None:intergenic 35.0%
TTATCGTACCAGGTATTTGA+TGG + Chr1:55344374-55344393 MsG0180003034.01.T01:intron 35.0%
TTATTGAGAGACTCATGTAC+AGG + Chr1:55344624-55344643 MsG0180003034.01.T01:CDS 35.0%
TTCACTTTCTACTACATCCA+AGG - Chr1:55349254-55349273 None:intergenic 35.0%
TTCTTCTTCCTCAAGAAGTT+TGG - Chr1:55347781-55347800 None:intergenic 35.0%
TTGTTTCAGAAAATGGAGGA+GGG + Chr1:55348279-55348298 MsG0180003034.01.T01:CDS 35.0%
TTTAGAGAGAGAAAGAGAGA+AGG - Chr1:55343051-55343070 None:intergenic 35.0%
! AAGAATCGTGATGATGTTGT+TGG + Chr1:55343234-55343253 MsG0180003034.01.T01:CDS 35.0%
! ACAATCTCTTCTAAGGATGA+AGG + Chr1:55344592-55344611 MsG0180003034.01.T01:CDS 35.0%
! AGAGGAGTACAATTTGTTTG+CGG + Chr1:55349966-55349985 MsG0180003034.01.T01:CDS 35.0%
! ATATCAGGTTTGATAGCAAG+AGG + Chr1:55345835-55345854 MsG0180003034.01.T01:intron 35.0%
! ATGATTTGATGGACAAAGAC+GGG + Chr1:55346598-55346617 MsG0180003034.01.T01:CDS 35.0%
! CAAACATTTGCTGATACTGT+GGG + Chr1:55346128-55346147 MsG0180003034.01.T01:CDS 35.0%
! GATGATTTGATGGACAAAGA+CGG + Chr1:55346597-55346616 MsG0180003034.01.T01:CDS 35.0%
! GATTAGTCAGTCATCTATTC+TGG - Chr1:55343700-55343719 None:intergenic 35.0%
! GCCTTGAGTATATTTTCCTT+AGG + Chr1:55344787-55344806 MsG0180003034.01.T01:intron 35.0%
! GCTTAACTTTTTATCGTACC+AGG + Chr1:55344364-55344383 MsG0180003034.01.T01:intron 35.0%
! GTTTTTGTGTTGCCAATGAT+TGG + Chr1:55343386-55343405 MsG0180003034.01.T01:intron 35.0%
! TATGGTATTGGAGTTTACTC+TGG + Chr1:55345096-55345115 MsG0180003034.01.T01:intron 35.0%
! TGTATTTTCACGGTTTGAAG+AGG - Chr1:55349068-55349087 None:intergenic 35.0%
! TTGAATTTTGGATCTAGCAG+TGG + Chr1:55343415-55343434 MsG0180003034.01.T01:intron 35.0%
! TTTTGGGCAGTTTCTAATAC+AGG - Chr1:55349289-55349308 None:intergenic 35.0%
!! CTTCTAGGATGATGATTTGA+TGG + Chr1:55346587-55346606 MsG0180003034.01.T01:intron 35.0%
!! GTTGATGAAGTTGATGATTC+AGG + Chr1:55348809-55348828 MsG0180003034.01.T01:CDS 35.0%
!! GTTTTTGAAAACTCGGTATC+CGG + Chr1:55343674-55343693 MsG0180003034.01.T01:intron 35.0%
!! TCAGGTTGAGAACAAACATT+GGG - Chr1:55349334-55349353 None:intergenic 35.0%
!! TTCAGGTTGAGAACAAACAT+TGG - Chr1:55349335-55349354 None:intergenic 35.0%
!! TTGAGGTGTTGATTGTTGTA+AGG - Chr1:55349569-55349588 None:intergenic 35.0%
!!! CCCAATTCAGTAATGGATTT+TGG + Chr1:55343208-55343227 MsG0180003034.01.T01:CDS 35.0%
!!! GTGATACATTGGTGGATTTT+TGG + Chr1:55344546-55344565 MsG0180003034.01.T01:CDS 35.0%
!!! TTTTGATTTTTGAAACCCCC+GGG - Chr1:55344130-55344149 None:intergenic 35.0%
AAACTGAGATACTTGACCTG+TGG - Chr1:55348771-55348790 None:intergenic 40.0%
AAACTGCAGTCGATACATCT+AGG + Chr1:55348558-55348577 MsG0180003034.01.T01:CDS 40.0%
AAATGATCTTGCATGGATGC+TGG - Chr1:55349676-55349695 None:intergenic 40.0%
AACCTGAAATAAGTGTGACG+AGG + Chr1:55348948-55348967 MsG0180003034.01.T01:CDS 40.0%
AAGAGAAATGGAATGACCGA+AGG + Chr1:55348860-55348879 MsG0180003034.01.T01:CDS 40.0%
AAGATCATTCTGACAGCCTT+CGG - Chr1:55348879-55348898 None:intergenic 40.0%
AAGTGTGGCGTATGTGTATT+GGG + Chr1:55344303-55344322 MsG0180003034.01.T01:intron 40.0%
AATGGTTGTGTCCAAGTCAA+TGG + Chr1:55346230-55346249 MsG0180003034.01.T01:CDS 40.0%
AATTTCGGAACATCTTCCAG+AGG + Chr1:55348338-55348357 MsG0180003034.01.T01:CDS 40.0%
ACAGTATAATTGGTGTGGTG+AGG + Chr1:55346870-55346889 MsG0180003034.01.T01:intron 40.0%
ACTTGGCAGAATTACTGAGT+CGG - Chr1:55349771-55349790 None:intergenic 40.0%
AGAAATTCTCGAGCAAGTTC+AGG - Chr1:55346672-55346691 None:intergenic 40.0%
AGCCAAGGAATAGTGAGTTA+TGG + Chr1:55344470-55344489 MsG0180003034.01.T01:CDS 40.0%
AGGACTGCAAATTGTAAGTG+TGG + Chr1:55344288-55344307 MsG0180003034.01.T01:intron 40.0%
AGGCCCACCAAAATGAAATA+AGG - Chr1:55349818-55349837 None:intergenic 40.0%
AGGTTGAGAACAAACATTGG+GGG - Chr1:55349332-55349351 None:intergenic 40.0%
AGTATAATTGGTGTGGTGAG+GGG + Chr1:55346872-55346891 MsG0180003034.01.T01:intron 40.0%
AGTCTAGGTGACACAGTATT+AGG - Chr1:55345123-55345142 None:intergenic 40.0%
ATAGCTGCAGGGTTAAATTG+AGG - Chr1:55349586-55349605 None:intergenic 40.0%
ATCTAATTTCCAAGCTCGGA+GGG - Chr1:55346291-55346310 None:intergenic 40.0%
ATGACTCGATTCAAGCTGAT+TGG + Chr1:55346102-55346121 MsG0180003034.01.T01:CDS 40.0%
ATTCTTTGAGCATGCTGAAG+AGG + Chr1:55346430-55346449 MsG0180003034.01.T01:CDS 40.0%
CACTTGAGAACTCTTCATCT+TGG - Chr1:55348073-55348092 None:intergenic 40.0%
CAGTATAATTGGTGTGGTGA+GGG + Chr1:55346871-55346890 MsG0180003034.01.T01:intron 40.0%
CCACAGTATCAGCAAATGTT+TGG - Chr1:55346130-55346149 None:intergenic 40.0%
CCATGAACTTTGGACATTAG+AGG - Chr1:55346505-55346524 None:intergenic 40.0%
CCGTGGTAGTAAGTATAATC+AGG + Chr1:55348589-55348608 MsG0180003034.01.T01:CDS 40.0%
CCTCTAATGTCCAAAGTTCA+TGG + Chr1:55346502-55346521 MsG0180003034.01.T01:intron 40.0%
CGTTCATTTGAAAAGGCTAC+AGG - Chr1:55349838-55349857 None:intergenic 40.0%
CTAAATGATGCCATCCTTGA+TGG + Chr1:55345743-55345762 MsG0180003034.01.T01:intron 40.0%
CTTTCCTGTGTTCAAATCAG+TGG + Chr1:55343516-55343535 MsG0180003034.01.T01:intron 40.0%
CTTTCTACTACATCCAAGGA+TGG - Chr1:55349250-55349269 None:intergenic 40.0%
GAAAGAGACTGCTTTCATAG+AGG + Chr1:55349948-55349967 MsG0180003034.01.T01:CDS 40.0%
GAAATTCTCGAGCAAGTTCA+GGG - Chr1:55346671-55346690 None:intergenic 40.0%
GATAAACTGGAATAGCTGCA+GGG - Chr1:55349597-55349616 None:intergenic 40.0%
GATTGAAGCATATCCCTACT+TGG - Chr1:55348671-55348690 None:intergenic 40.0%
GCATATGAACATGACAGGAA+TGG + Chr1:55348149-55348168 MsG0180003034.01.T01:CDS 40.0%
GCTTCACTGTGGAAACTATA+TGG + Chr1:55350316-55350335 MsG0180003034.01.T01:three_prime_UTR 40.0%
GGAATAGTGAGTTATGGTAG+AGG + Chr1:55344476-55344495 MsG0180003034.01.T01:CDS 40.0%
GGATTACCCCAATTCAGTAA+TGG + Chr1:55343201-55343220 MsG0180003034.01.T01:CDS 40.0%
GGTAGAAAAAGCTTTCAGAG+AGG + Chr1:55347533-55347552 MsG0180003034.01.T01:intron 40.0%
GTGAGGTTAAGTTAAGACTC+AGG + Chr1:55345256-55345275 MsG0180003034.01.T01:intron 40.0%
GTGTTAACCTTCGATAATGC+AGG + Chr1:55344677-55344696 MsG0180003034.01.T01:intron 40.0%
GTTATGCCCCGTCATTAAAT+AGG - Chr1:55343747-55343766 None:intergenic 40.0%
TAAGTGTGGCGTATGTGTAT+TGG + Chr1:55344302-55344321 MsG0180003034.01.T01:intron 40.0%
TATTTATATGCTGGCCCTCT+TGG + Chr1:55349499-55349518 MsG0180003034.01.T01:CDS 40.0%
TCGAAGGTTAACACAGTATG+GGG - Chr1:55344671-55344690 None:intergenic 40.0%
TCTAGTGCCACATGAAGAAT+GGG - Chr1:55350053-55350072 None:intergenic 40.0%
TGAGGGTTCATTGACACTTA+TGG + Chr1:55344237-55344256 MsG0180003034.01.T01:CDS 40.0%
TGATAAACTGGAATAGCTGC+AGG - Chr1:55349598-55349617 None:intergenic 40.0%
TGATACTGCCTTTCAGTATG+AGG + Chr1:55345962-55345981 MsG0180003034.01.T01:CDS 40.0%
TGCAGACAGTTCTTCCTTTA+CGG - Chr1:55347955-55347974 None:intergenic 40.0%
TGCAGTTTCAGACTTACTGA+CGG - Chr1:55348546-55348565 None:intergenic 40.0%
TGGATCTTGAGTTCAAGATC+TGG + Chr1:55347403-55347422 MsG0180003034.01.T01:intron 40.0%
TGTCTGACTGTTGTGAACTT+GGG + Chr1:55349167-55349186 MsG0180003034.01.T01:CDS 40.0%
TTACTGAATTGGGGTAATCC+TGG - Chr1:55343201-55343220 None:intergenic 40.0%
TTCCTCAGATCCAATTTCTG+TGG - Chr1:55348930-55348949 None:intergenic 40.0%
TTGCGGCAAGTAATACCTTA+AGG + Chr1:55349983-55350002 MsG0180003034.01.T01:CDS 40.0%
TTGGTCATTTCCTTAGTCCA+CGG - Chr1:55345008-55345027 None:intergenic 40.0%
TTTCAGACTCCTTCAGCAAT+GGG + Chr1:55349400-55349419 MsG0180003034.01.T01:CDS 40.0%
TTTGCAGACCAAACTTCTTG+AGG + Chr1:55347770-55347789 MsG0180003034.01.T01:intron 40.0%
! AACTCTGTATGGACTGACAT+TGG + Chr1:55343764-55343783 MsG0180003034.01.T01:intron 40.0%
! AGATTGGATGTCTAGAGTTG+TGG - Chr1:55345153-55345172 None:intergenic 40.0%
! ATGTACTGCTCTAGATGCAA+TGG + Chr1:55344016-55344035 MsG0180003034.01.T01:CDS 40.0%
! ATTGGATGTCTAGAGTTGTG+GGG - Chr1:55345151-55345170 None:intergenic 40.0%
! CAGGTTGAGAACAAACATTG+GGG - Chr1:55349333-55349352 None:intergenic 40.0%
! CCAAACATTTGCTGATACTG+TGG + Chr1:55346127-55346146 MsG0180003034.01.T01:CDS 40.0%
! GATTGGATGTCTAGAGTTGT+GGG - Chr1:55345152-55345171 None:intergenic 40.0%
! GCAGTTGTTTCAGAAAATGG+AGG + Chr1:55348275-55348294 MsG0180003034.01.T01:CDS 40.0%
! GCCATGAAACTGGATTTTGA+TGG - Chr1:55349432-55349451 None:intergenic 40.0%
! GTTGTTTCAGAAAATGGAGG+AGG + Chr1:55348278-55348297 MsG0180003034.01.T01:CDS 40.0%
! TTTTTCACTCATCCGGTAGT+TGG - Chr1:55348456-55348475 None:intergenic 40.0%
!! AAAGGGCATCAAACCATTTG+CGG - Chr1:55349464-55349483 None:intergenic 40.0%
!! AAATGCTTTTTGAGCAAGCG+CGG + Chr1:55343987-55344006 MsG0180003034.01.T01:CDS 40.0%
!! GTTATTTTGCTCTGCATCAG+CGG - Chr1:55347979-55347998 None:intergenic 40.0%
!! TGCAATGGATTGCTTCTTGA+AGG + Chr1:55344031-55344050 MsG0180003034.01.T01:CDS 40.0%
!! TGTATGTTTCGGTTTGGCAT+TGG - Chr1:55349370-55349389 None:intergenic 40.0%
!! TTATTTTGCTCTGCATCAGC+GGG - Chr1:55347978-55347997 None:intergenic 40.0%
!! TTGTCTTGCTCTAAAACTGC+TGG + Chr1:55347590-55347609 MsG0180003034.01.T01:CDS 40.0%
!! TTTAGAAAGCCTTTGAGGTG+AGG + Chr1:55345239-55345258 MsG0180003034.01.T01:intron 40.0%
!! TTTCTGGAATTAGCTGCAAC+TGG - Chr1:55349727-55349746 None:intergenic 40.0%
!!! AGTTTATTTTGCACTGGCCA+TGG + Chr1:55347457-55347476 MsG0180003034.01.T01:intron 40.0%
AAACCAAAGCTGCTTCACTG+TGG + Chr1:55350305-55350324 MsG0180003034.01.T01:three_prime_UTR 45.0%
AAAGACGGGAATGAGCTTGA+TGG + Chr1:55346612-55346631 MsG0180003034.01.T01:CDS 45.0%
AACTTCACACACACACACAC+AGG + Chr1:55347061-55347080 MsG0180003034.01.T01:intron 45.0%
AAGTCACAAGAGAGTAACGG+TGG + Chr1:55349787-55349806 MsG0180003034.01.T01:CDS 45.0%
AATTTCATTCCGGACCCCAT+TGG - Chr1:55344173-55344192 None:intergenic 45.0%
ACATCTTCCAGAGGAATCAG+TGG + Chr1:55348347-55348366 MsG0180003034.01.T01:CDS 45.0%
ACCATTGCATGCTACACCTA+AGG - Chr1:55344806-55344825 None:intergenic 45.0%
ACCGTTACTCTCTTGTGACT+TGG - Chr1:55349788-55349807 None:intergenic 45.0%
ACTTCACACACACACACACA+GGG + Chr1:55347062-55347081 MsG0180003034.01.T01:intron 45.0%
AGAAGGCAACAAGTTCCCTT+TGG - Chr1:55345581-55345600 None:intergenic 45.0%
AGAGGGGGCCTATTTAATGA+CGG + Chr1:55343736-55343755 MsG0180003034.01.T01:intron 45.0%
AGATCTGAGCCAAGACACTA+TGG + Chr1:55348311-55348330 MsG0180003034.01.T01:CDS 45.0%
AGGATCCATCAGTTCATCCT+TGG + Chr1:55344194-55344213 MsG0180003034.01.T01:CDS 45.0%
AGTCAGTCATCTATTCTGGC+CGG - Chr1:55343696-55343715 None:intergenic 45.0%
AGTTCTTCCTTTACGGCTTC+AGG - Chr1:55347948-55347967 None:intergenic 45.0%
AGTTGTGGGGTTGAAAGTCT+AGG - Chr1:55345138-55345157 None:intergenic 45.0%
ATAATCTAGTGGAGCCTGAG+TGG - Chr1:55344713-55344732 None:intergenic 45.0%
ATCAGCAACACAAAACCAGC+TGG - Chr1:55345946-55345965 None:intergenic 45.0%
ATCCCAATGTCTACTAGAGG+GGG + Chr1:55343721-55343740 MsG0180003034.01.T01:intron 45.0%
ATGAAAGTCTGGCAGTATGC+AGG - Chr1:55344526-55344545 None:intergenic 45.0%
ATGCATGCTAGAGCTGTGTT+GGG - Chr1:55345317-55345336 None:intergenic 45.0%
ATGGTAGAGGACATGGAACA+AGG + Chr1:55344489-55344508 MsG0180003034.01.T01:CDS 45.0%
CAAGTCAATGGCCTAGATCT+TGG + Chr1:55346242-55346261 MsG0180003034.01.T01:CDS 45.0%
CACTCAAACCACCAAGATCT+AGG - Chr1:55346256-55346275 None:intergenic 45.0%
CAGAAAAGCAGGACTGAATG+GGG + Chr1:55349741-55349760 MsG0180003034.01.T01:CDS 45.0%
CAGGGATTTCACCAATTCCT+TGG + Chr1:55347080-55347099 MsG0180003034.01.T01:intron 45.0%
CATCCCAATGTCTACTAGAG+GGG + Chr1:55343720-55343739 MsG0180003034.01.T01:intron 45.0%
CATCTAATTTCCAAGCTCGG+AGG - Chr1:55346292-55346311 None:intergenic 45.0%
CATTCTTCATGTGGCACTAG+AGG + Chr1:55350052-55350071 MsG0180003034.01.T01:three_prime_UTR 45.0%
CCAGAAAAGCAGGACTGAAT+GGG + Chr1:55349740-55349759 MsG0180003034.01.T01:CDS 45.0%
CCATCCCAATGTCTACTAGA+GGG + Chr1:55343719-55343738 MsG0180003034.01.T01:intron 45.0%
CTAGTGCCACATGAAGAATG+GGG - Chr1:55350052-55350071 None:intergenic 45.0%
CTCAGGCAACTATCCAAGTA+GGG + Chr1:55348655-55348674 MsG0180003034.01.T01:CDS 45.0%
CTCCACAGAAATTGGATCTG+AGG + Chr1:55348925-55348944 MsG0180003034.01.T01:CDS 45.0%
CTCCGAGCTTGGAAATTAGA+TGG + Chr1:55346290-55346309 MsG0180003034.01.T01:CDS 45.0%
CTCGCCTTTATCTCAAACCA+AGG - Chr1:55347100-55347119 None:intergenic 45.0%
CTCTAGTGCCACATGAAGAA+TGG - Chr1:55350054-55350073 None:intergenic 45.0%
CTCTGGTCACTCTACTGTTT+GGG - Chr1:55348505-55348524 None:intergenic 45.0%
CTGGAGCAGATGATTGTTTG+AGG + Chr1:55343814-55343833 MsG0180003034.01.T01:intron 45.0%
CTGGCAACTGGATGATAAAC+TGG - Chr1:55349610-55349629 None:intergenic 45.0%
GAAGGCAACAAGTTCCCTTT+GGG - Chr1:55345580-55345599 None:intergenic 45.0%
GAGACACACCTCATACTGAA+AGG - Chr1:55345973-55345992 None:intergenic 45.0%
GAGCTTGGAAATTAGATGGC+CGG + Chr1:55346294-55346313 MsG0180003034.01.T01:CDS 45.0%
GATCCATCAGTTCATCCTTG+GGG + Chr1:55344196-55344215 MsG0180003034.01.T01:CDS 45.0%
GATCTTGATGCAGAAGCTGA+AGG + Chr1:55348893-55348912 MsG0180003034.01.T01:CDS 45.0%
GCAGCTAATTCCAGAAAAGC+AGG + Chr1:55349730-55349749 MsG0180003034.01.T01:CDS 45.0%
GCCAAGTCACAAGAGAGTAA+CGG + Chr1:55349784-55349803 MsG0180003034.01.T01:CDS 45.0%
GGAAAATCTTTGCAGCCAGA+AGG + Chr1:55344076-55344095 MsG0180003034.01.T01:CDS 45.0%
GGATCCATCAGTTCATCCTT+GGG + Chr1:55344195-55344214 MsG0180003034.01.T01:CDS 45.0%
GGCCATCTAATTTCCAAGCT+CGG - Chr1:55346295-55346314 None:intergenic 45.0%
GTAGACATGCATGAGAGTAG+TGG + Chr1:55348611-55348630 MsG0180003034.01.T01:CDS 45.0%
GTCAAGAATGCGTACATTGC+AGG + Chr1:55346354-55346373 MsG0180003034.01.T01:CDS 45.0%
GTCATCAGATACCTGAAGGT+AGG - Chr1:55346087-55346106 None:intergenic 45.0%
GTGAGTTATGGTAGAGGACA+TGG + Chr1:55344482-55344501 MsG0180003034.01.T01:CDS 45.0%
GTGTCTGACTGTTGTGAACT+TGG + Chr1:55349166-55349185 MsG0180003034.01.T01:CDS 45.0%
GTTTATCATCCAGTTGCCAG+AGG + Chr1:55349610-55349629 MsG0180003034.01.T01:CDS 45.0%
GTTTCAGACTCCTTCAGCAA+TGG + Chr1:55349399-55349418 MsG0180003034.01.T01:CDS 45.0%
TATCTCAGTTTGATCCGGTC+AGG + Chr1:55348780-55348799 MsG0180003034.01.T01:CDS 45.0%
TATGCATGCTAGAGCTGTGT+TGG - Chr1:55345318-55345337 None:intergenic 45.0%
TCCAGAAAAGCAGGACTGAA+TGG + Chr1:55349739-55349758 MsG0180003034.01.T01:CDS 45.0%
TCCATCCCAATGTCTACTAG+AGG + Chr1:55343718-55343737 MsG0180003034.01.T01:intron 45.0%
TCCATTTAAGCCCTTACCTC+TGG - Chr1:55349629-55349648 None:intergenic 45.0%
TCCTTAGGTGTAGCATGCAA+TGG + Chr1:55344802-55344821 MsG0180003034.01.T01:intron 45.0%
TCGAGTCATCAGATACCTGA+AGG - Chr1:55346091-55346110 None:intergenic 45.0%
TCTCAGGCAACTATCCAAGT+AGG + Chr1:55348654-55348673 MsG0180003034.01.T01:CDS 45.0%
TCTTGCAGCTCCACAGAAAT+TGG + Chr1:55348917-55348936 MsG0180003034.01.T01:CDS 45.0%
TGAAAGTCTGGCAGTATGCA+GGG - Chr1:55344525-55344544 None:intergenic 45.0%
TGCAGGTTAATTGTAGGGGA+TGG + Chr1:55346371-55346390 MsG0180003034.01.T01:CDS 45.0%
TGGAACAACCCTTTCTGCAA+TGG - Chr1:55349707-55349726 None:intergenic 45.0%
TGGTAGAGGACATGGAACAA+GGG + Chr1:55344490-55344509 MsG0180003034.01.T01:CDS 45.0%
TGGTAGTAACCCATTGCTGA+AGG - Chr1:55349412-55349431 None:intergenic 45.0%
TGGTCATTTCCTTAGTCCAC+GGG - Chr1:55345007-55345026 None:intergenic 45.0%
TGTCTTCAAAGTGGTCTGAC+AGG + Chr1:55348243-55348262 MsG0180003034.01.T01:CDS 45.0%
TGTGGACCTCAACGTAACAT+CGG - Chr1:55348753-55348772 None:intergenic 45.0%
TTCAGAAAATGGAGGAGGGA+TGG + Chr1:55348283-55348302 MsG0180003034.01.T01:CDS 45.0%
TTCAGTCCCCATTCTTCATG+TGG + Chr1:55350043-55350062 MsG0180003034.01.T01:three_prime_UTR 45.0%
TTGGGCTACAACTGCAAGAA+TGG - Chr1:55348487-55348506 None:intergenic 45.0%
TTTCCACAGTGAAGCAGCTT+TGG - Chr1:55350311-55350330 None:intergenic 45.0%
! AAGAAGAAGAGCGCAAAGAG+AGG + Chr1:55347814-55347833 MsG0180003034.01.T01:CDS 45.0%
! ACATCTAGGCAGTTTTACCG+TGG + Chr1:55348572-55348591 MsG0180003034.01.T01:CDS 45.0%
! AGTTCAACCTGCGTTGACAA+TGG + Chr1:55349142-55349161 MsG0180003034.01.T01:CDS 45.0%
! ATTGGAGGAAGCATGCTTTC+AGG - Chr1:55349352-55349371 None:intergenic 45.0%
! CAAGATCTAGGCCATTGACT+TGG - Chr1:55346244-55346263 None:intergenic 45.0%
! CTTGGCTAGCATTTTGTCTC+TGG + Chr1:55345449-55345468 MsG0180003034.01.T01:intron 45.0%
! CTTGGTTTGAGATAAAGGCG+AGG + Chr1:55347098-55347117 MsG0180003034.01.T01:intron 45.0%
! GTGGACTAAGGAAATGACCA+AGG + Chr1:55345007-55345026 MsG0180003034.01.T01:intron 45.0%
!! AAGGGCATCAAACCATTTGC+GGG - Chr1:55349463-55349482 None:intergenic 45.0%
!! ATGTTTCGGTTTGGCATTGG+AGG - Chr1:55349367-55349386 None:intergenic 45.0%
!! GTTCAATCCACTGATTCCTC+TGG - Chr1:55348357-55348376 None:intergenic 45.0%
!! TAGCTTGTTCCACTCCCAAA+GGG + Chr1:55345563-55345582 MsG0180003034.01.T01:intron 45.0%
!! TCAGCCACTGATTTGAACAC+AGG - Chr1:55343523-55343542 None:intergenic 45.0%
!! TCTTGCTCTAAAACTGCTGG+AGG + Chr1:55347593-55347612 MsG0180003034.01.T01:CDS 45.0%
!!! CTAGTTTTAGGGGTTGAGCT+AGG + Chr1:55345051-55345070 MsG0180003034.01.T01:intron 45.0%
!!! TTAATTATTATTCTTTTATT+AGG + Chr1:55347666-55347685 MsG0180003034.01.T01:intron 5.0%
AACTGAACACCTGCTCCTTC+TGG - Chr1:55344094-55344113 None:intergenic 50.0%
AGAAAGAGAGAAGGGTGGTG+TGG - Chr1:55343042-55343061 None:intergenic 50.0%
AGGGGGCCTATTTAATGACG+GGG + Chr1:55343738-55343757 MsG0180003034.01.T01:intron 50.0%
AGTTTCCTTGTGGAAGACCC+GGG + Chr1:55344110-55344129 MsG0180003034.01.T01:CDS 50.0%
CAGACTCCGATGTTACGTTG+AGG + Chr1:55348744-55348763 MsG0180003034.01.T01:CDS 50.0%
CAGTTTCCTTGTGGAAGACC+CGG + Chr1:55344109-55344128 MsG0180003034.01.T01:CDS 50.0%
CATCAAACCATTTGCGGGAG+CGG - Chr1:55349458-55349477 None:intergenic 50.0%
CATCCAGTTGCCAGAGGTAA+GGG + Chr1:55349616-55349635 MsG0180003034.01.T01:CDS 50.0%
CATGTGGCACTAGAGGTTTG+AGG + Chr1:55350059-55350078 MsG0180003034.01.T01:three_prime_UTR 50.0%
CCAAACAGTAGAGTGACCAG+AGG + Chr1:55348503-55348522 MsG0180003034.01.T01:CDS 50.0%
CCCTCTAGTAGACATTGGGA+TGG - Chr1:55343722-55343741 None:intergenic 50.0%
CCTCTGGTCACTCTACTGTT+TGG - Chr1:55348506-55348525 None:intergenic 50.0%
CCTGAGAAGACTCTGCCTTT+GGG - Chr1:55348641-55348660 None:intergenic 50.0%
CGCCTCGTCACACTTATTTC+AGG - Chr1:55348953-55348972 None:intergenic 50.0%
CTTTGAGCATGCTGAAGAGG+CGG + Chr1:55346433-55346452 MsG0180003034.01.T01:CDS 50.0%
GAAAATGGAGGAGGGATGGT+AGG + Chr1:55348287-55348306 MsG0180003034.01.T01:CDS 50.0%
GAGAGAGAAAGAGAGAAGGG+TGG - Chr1:55343047-55343066 None:intergenic 50.0%
GAGGGGGCCTATTTAATGAC+GGG + Chr1:55343737-55343756 MsG0180003034.01.T01:intron 50.0%
GATGTTACGTTGAGGTCCAC+AGG + Chr1:55348752-55348771 MsG0180003034.01.T01:CDS 50.0%
GCAGGTGTTCAGTTTCCTTG+TGG + Chr1:55344100-55344119 MsG0180003034.01.T01:CDS 50.0%
GCCAGAGGTAAGGGCTTAAA+TGG + Chr1:55349625-55349644 MsG0180003034.01.T01:CDS 50.0%
GGTCATTTCCTTAGTCCACG+GGG - Chr1:55345006-55345025 None:intergenic 50.0%
GTAGAGTGACCAGAGGTAGT+CGG + Chr1:55348510-55348529 MsG0180003034.01.T01:CDS 50.0%
GTCAATGGCCTAGATCTTGG+TGG + Chr1:55346245-55346264 MsG0180003034.01.T01:CDS 50.0%
GTCGCTATCTGTTCCATCCT+TGG + Chr1:55349234-55349253 MsG0180003034.01.T01:CDS 50.0%
GTGGATCGTCCACTTCCAAT+GGG + Chr1:55344155-55344174 MsG0180003034.01.T01:CDS 50.0%
TAGAGTGACCAGAGGTAGTC+GGG + Chr1:55348511-55348530 MsG0180003034.01.T01:CDS 50.0%
TAGCTCTCCTGAAGCCGTAA+AGG + Chr1:55347938-55347957 MsG0180003034.01.T01:CDS 50.0%
TCATCCAGTTGCCAGAGGTA+AGG + Chr1:55349615-55349634 MsG0180003034.01.T01:CDS 50.0%
TGAAGAGGCGGAAGAAGAAG+AGG + Chr1:55346445-55346464 MsG0180003034.01.T01:CDS 50.0%
TGACGGGGCATAACTCTGTA+TGG + Chr1:55343753-55343772 MsG0180003034.01.T01:intron 50.0%
TGCTCGTCATGTCTAAGCGA+GGG + Chr1:55349028-55349047 MsG0180003034.01.T01:CDS 50.0%
TGGATCGTCCACTTCCAATG+GGG + Chr1:55344156-55344175 MsG0180003034.01.T01:CDS 50.0%
TGGGGTCCGGAATGAAATTC+AGG + Chr1:55344174-55344193 MsG0180003034.01.T01:CDS 50.0%
TTCCTTGGCTTATCCAGCCA+CGG - Chr1:55344460-55344479 None:intergenic 50.0%
TTTACGGCTTCAGGAGAGCT+AGG - Chr1:55347939-55347958 None:intergenic 50.0%
TTTCATCTCCCGACTACCTC+TGG - Chr1:55348522-55348541 None:intergenic 50.0%
! CAACAAGTTCCCTTTGGGAG+TGG - Chr1:55345575-55345594 None:intergenic 50.0%
! CATACTGCAAGCAGAAGCGT+GGG - Chr1:55349543-55349562 None:intergenic 50.0%
! GAGAGTAGTGGAAGACCCAA+AGG + Chr1:55348623-55348642 MsG0180003034.01.T01:CDS 50.0%
! GCTGAAGGAGTCTGAAACAC+AGG - Chr1:55349397-55349416 None:intergenic 50.0%
! GGTTTGAGATAAAGGCGAGG+CGG + Chr1:55347101-55347120 MsG0180003034.01.T01:intron 50.0%
! TCTTCGCATGCTTTTGCGGA+CGG - Chr1:55346647-55346666 None:intergenic 50.0%
! TTGCACTGGCCATGGTTGTT+GGG + Chr1:55347465-55347484 MsG0180003034.01.T01:intron 50.0%
! TTTGCACTGGCCATGGTTGT+TGG + Chr1:55347464-55347483 MsG0180003034.01.T01:intron 50.0%
!! ATCACTTTGAGTGGGCTGTG+GGG + Chr1:55346159-55346178 MsG0180003034.01.T01:CDS 50.0%
!! ATTTGATGGCGCACGTGCTA+GGG + Chr1:55344388-55344407 MsG0180003034.01.T01:CDS 50.0%
!! CATCACTTTGAGTGGGCTGT+GGG + Chr1:55346158-55346177 MsG0180003034.01.T01:CDS 50.0%
!! CCCATTCAGTCCTGCTTTTC+TGG - Chr1:55349743-55349762 None:intergenic 50.0%
!! CTAGCTTGTTCCACTCCCAA+AGG + Chr1:55345562-55345581 MsG0180003034.01.T01:intron 50.0%
!! TATTTGATGGCGCACGTGCT+AGG + Chr1:55344387-55344406 MsG0180003034.01.T01:CDS 50.0%
!! TCATCACTTTGAGTGGGCTG+TGG + Chr1:55346157-55346176 MsG0180003034.01.T01:CDS 50.0%
!!! GTGGATTTTTGGTCCGCACT+GGG + Chr1:55344557-55344576 MsG0180003034.01.T01:CDS 50.0%
AAACCATTTGCGGGAGCGGT+TGG - Chr1:55349454-55349473 None:intergenic 55.0%
AAGAGTTCCTGCCGAGCTTG+TGG - Chr1:55343953-55343972 None:intergenic 55.0%
AAGCCCTTACCTCTGGCAAC+TGG - Chr1:55349622-55349641 None:intergenic 55.0%
AAGCTCGGCAGGAACTCTTG+AGG + Chr1:55343954-55343973 MsG0180003034.01.T01:CDS 55.0%
AGACACGCCATTGTCAACGC+AGG - Chr1:55349152-55349171 None:intergenic 55.0%
AGGCCCCCTCTAGTAGACAT+TGG - Chr1:55343727-55343746 None:intergenic 55.0%
AGGTTTGACGACAACGCGTG+AGG + Chr1:55344219-55344238 MsG0180003034.01.T01:CDS 55.0%
ATGGTGAGGGTCTGTCAAGC+AGG + Chr1:55349212-55349231 MsG0180003034.01.T01:CDS 55.0%
ATTCCGGACCCCATTGGAAG+TGG - Chr1:55344167-55344186 None:intergenic 55.0%
CAAAACCAGCTGGTGCAACG+AGG - Chr1:55345936-55345955 None:intergenic 55.0%
CACGTGCGCCATCAAATACC+TGG - Chr1:55344385-55344404 None:intergenic 55.0%
CCACGCTTCTGCTTGCAGTA+TGG + Chr1:55349541-55349560 MsG0180003034.01.T01:CDS 55.0%
CCATACTGCAAGCAGAAGCG+TGG - Chr1:55349544-55349563 None:intergenic 55.0%
CCATCAGTTCATCCTTGGGG+AGG + Chr1:55344199-55344218 MsG0180003034.01.T01:CDS 55.0%
CCCAAAGGCAGAGTCTTCTC+AGG + Chr1:55348638-55348657 MsG0180003034.01.T01:CDS 55.0%
CCTCCCCAAGGATGAACTGA+TGG - Chr1:55344202-55344221 None:intergenic 55.0%
CTACGGCCCTGCATTATCGA+AGG - Chr1:55344687-55344706 None:intergenic 55.0%
CTGCTCGTCATGTCTAAGCG+AGG + Chr1:55349027-55349046 MsG0180003034.01.T01:CDS 55.0%
CTGCTTTATCCCGATGCCTG+TGG + Chr1:55344425-55344444 MsG0180003034.01.T01:CDS 55.0%
CTTTATCCCGATGCCTGTGG+TGG + Chr1:55344428-55344447 MsG0180003034.01.T01:CDS 55.0%
GCCTGAGAAGACTCTGCCTT+TGG - Chr1:55348642-55348661 None:intergenic 55.0%
GCTTCATTACCCTCCGAGCT+TGG + Chr1:55346279-55346298 MsG0180003034.01.T01:CDS 55.0%
GGCCCCCTCTAGTAGACATT+GGG - Chr1:55343726-55343745 None:intergenic 55.0%
GGTGGATCGTCCACTTCCAA+TGG + Chr1:55344154-55344173 MsG0180003034.01.T01:CDS 55.0%
GGTTTGACGACAACGCGTGA+GGG + Chr1:55344220-55344239 MsG0180003034.01.T01:CDS 55.0%
GTCTGCACACCCAACAACCA+TGG - Chr1:55347477-55347496 None:intergenic 55.0%
GTTGTCGTCAAACCTCCCCA+AGG - Chr1:55344214-55344233 None:intergenic 55.0%
GTTTCCTTGTGGAAGACCCG+GGG + Chr1:55344111-55344130 MsG0180003034.01.T01:CDS 55.0%
TCATCAACAGGCGACCTGAC+CGG - Chr1:55348797-55348816 None:intergenic 55.0%
TCCACGGGGTAACTCACAAG+AGG - Chr1:55344992-55345011 None:intergenic 55.0%
TCCTCTTGTGAGTTACCCCG+TGG + Chr1:55344988-55345007 MsG0180003034.01.T01:intron 55.0%
TCTTGTCTCCTCACCCAGTG+CGG - Chr1:55344573-55344592 None:intergenic 55.0%
TCTTTGCAGCCAGAAGGAGC+AGG + Chr1:55344082-55344101 MsG0180003034.01.T01:CDS 55.0%
TGGGCTGTGGGGACAAATGA+AGG + Chr1:55346170-55346189 MsG0180003034.01.T01:CDS 55.0%
TTTCCTTGTGGAAGACCCGG+GGG + Chr1:55344112-55344131 MsG0180003034.01.T01:CDS 55.0%
! CTTCGCATGCTTTTGCGGAC+GGG - Chr1:55346646-55346665 None:intergenic 55.0%
! GGGCTCTTCGCATGCTTTTG+CGG - Chr1:55346651-55346670 None:intergenic 55.0%
! GTGAGTTACCCCGTGGACTA+AGG + Chr1:55344995-55345014 MsG0180003034.01.T01:intron 55.0%
!! TTTTTGGTCCGCACTGGGTG+AGG + Chr1:55344562-55344581 MsG0180003034.01.T01:CDS 55.0%
!!! GGTGGATTTTTGGTCCGCAC+TGG + Chr1:55344556-55344575 MsG0180003034.01.T01:CDS 55.0%
AAACCCCCGGGTCTTCCACA+AGG - Chr1:55344118-55344137 None:intergenic 60.0%
ACGTGCTAGGGAGCGGGAAA+GGG + Chr1:55344400-55344419 MsG0180003034.01.T01:CDS 60.0%
CGTCCACTTCCAATGGGGTC+CGG + Chr1:55344161-55344180 MsG0180003034.01.T01:CDS 60.0%
GAGAACCTCGTTGCACCAGC+TGG + Chr1:55345928-55345947 MsG0180003034.01.T01:CDS 60.0%
GTGAGCTGTCGCCACAAGCT+CGG + Chr1:55343939-55343958 MsG0180003034.01.T01:CDS 60.0%
TATCCCGATGCCTGTGGTGG+AGG + Chr1:55344431-55344450 MsG0180003034.01.T01:CDS 60.0%
TCTGGCAGTATGCAGGGCAC+AGG - Chr1:55344519-55344538 None:intergenic 60.0%
TGGAGCCTGAGTGGCTGCTA+CGG - Chr1:55344704-55344723 None:intergenic 60.0%
! GGAGCGGTTGGCCATGAAAC+TGG - Chr1:55349442-55349461 None:intergenic 60.0%
ATGGCGCACGTGCTAGGGAG+CGG + Chr1:55344393-55344412 MsG0180003034.01.T01:CDS 65.0%
CACGTGCTAGGGAGCGGGAA+AGG + Chr1:55344399-55344418 MsG0180003034.01.T01:CDS 65.0%
CCTCCTCCACCACAGGCATC+GGG - Chr1:55344437-55344456 None:intergenic 65.0%
GCCTCCTCCACCACAGGCAT+CGG - Chr1:55344438-55344457 None:intergenic 65.0%
GGCCGTGGCTGGATAAGCCA+AGG + Chr1:55344455-55344474 MsG0180003034.01.T01:CDS 65.0%
TGGCCAACCGCTCCCGCAAA+TGG + Chr1:55349448-55349467 MsG0180003034.01.T01:CDS 65.0%
CAGGGCCGTAGCAGCCACTC+AGG + Chr1:55344696-55344715 MsG0180003034.01.T01:intron 70.0%
GCTGTCGCCACAAGCTCGGC+AGG + Chr1:55343943-55343962 MsG0180003034.01.T01:CDS 70.0%
TGGCGCACGTGCTAGGGAGC+GGG + Chr1:55344394-55344413 MsG0180003034.01.T01:CDS 70.0%
! CCCGATGCCTGTGGTGGAGG+AGG + Chr1:55344434-55344453 MsG0180003034.01.T01:CDS 70.0%
GCCACGGCCTCCTCCACCAC+AGG - Chr1:55344444-55344463 None:intergenic 75.0%
! GCCTGTGGTGGAGGAGGCCG+TGG + Chr1:55344440-55344459 MsG0180003034.01.T01:CDS 75.0%
! GTGGTGGAGGAGGCCGTGGC+TGG + Chr1:55344444-55344463 MsG0180003034.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 55342969 55350375 55342969 ID=MsG0180003034.01;Name=MsG0180003034.01
Chr1 mRNA 55342969 55350375 55342969 ID=MsG0180003034.01.T01;Parent=MsG0180003034.01;Name=MsG0180003034.01.T01;_AED=0.21;_eAED=0.21;_QI=226|1|1|1|1|1|8|355|1242
Chr1 exon 55342969 55343275 55342969 ID=MsG0180003034.01.T01:exon:2985;Parent=MsG0180003034.01.T01
Chr1 exon 55343932 55344300 55343932 ID=MsG0180003034.01.T01:exon:2986;Parent=MsG0180003034.01.T01
Chr1 exon 55344386 55344645 55344386 ID=MsG0180003034.01.T01:exon:2987;Parent=MsG0180003034.01.T01
Chr1 exon 55345842 55345983 55345842 ID=MsG0180003034.01.T01:exon:2988;Parent=MsG0180003034.01.T01
Chr1 exon 55346095 55346466 55346095 ID=MsG0180003034.01.T01:exon:2989;Parent=MsG0180003034.01.T01
Chr1 exon 55346594 55346725 55346594 ID=MsG0180003034.01.T01:exon:2990;Parent=MsG0180003034.01.T01
Chr1 exon 55347534 55347662 55347534 ID=MsG0180003034.01.T01:exon:2991;Parent=MsG0180003034.01.T01
Chr1 exon 55347777 55350375 55347777 ID=MsG0180003034.01.T01:exon:2992;Parent=MsG0180003034.01.T01
Chr1 five_prime_UTR 55342969 55343194 55342969 ID=MsG0180003034.01.T01:five_prime_utr;Parent=MsG0180003034.01.T01
Chr1 CDS 55343195 55343275 55343195 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 CDS 55343932 55344300 55343932 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 CDS 55344386 55344645 55344386 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 CDS 55345842 55345983 55345842 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 CDS 55346095 55346466 55346095 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 CDS 55346594 55346725 55346594 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 CDS 55347534 55347662 55347534 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 CDS 55347777 55350020 55347777 ID=MsG0180003034.01.T01:cds;Parent=MsG0180003034.01.T01
Chr1 three_prime_UTR 55350021 55350375 55350021 ID=MsG0180003034.01.T01:three_prime_utr;Parent=MsG0180003034.01.T01
Gene Sequence

>MsG0180003034.01.T01

ATGCCAGGATTACCCCAATTCAGTAATGGATTTTGGTCTAAGAATCGTGATGATGTTGTTGGATATAATCAGCTTCACAAATTCTGGAGTGAGCTGTCGCCACAAGCTCGGCAGGAACTCTTGAGGATAGACAAGCAAATGCTTTTTGAGCAAGCGCGGAAAAATATGTACTGCTCTAGATGCAATGGATTGCTTCTTGAAGGATTTTTGCAAATTGTTATGTATGGAAAATCTTTGCAGCCAGAAGGAGCAGGTGTTCAGTTTCCTTGTGGAAGACCCGGGGGTTTCAAAAATCAAAATAACGGTGGATCGTCCACTTCCAATGGGGTCCGGAATGAAATTCAGGATCCATCAGTTCATCCTTGGGGAGGTTTGACGACAACGCGTGAGGGTTCATTGACACTTATGGACTGCTACTTGTATTCAAAGTCTCTGAAAGGACTGCAAATTGTATTTGATGGCGCACGTGCTAGGGAGCGGGAAAGGGAACTGCTTTATCCCGATGCCTGTGGTGGAGGAGGCCGTGGCTGGATAAGCCAAGGAATAGTGAGTTATGGTAGAGGACATGGAACAAGGGAAACCTGTGCCCTGCATACTGCCAGACTTTCATGTGATACATTGGTGGATTTTTGGTCCGCACTGGGTGAGGAGACAAGACAATCTCTTCTAAGGATGAAGGAAGAAGATTTTATTGAGAGACTCATGTACAGGTTTGATAGCAAGAGGTTTTGCAGAGATTGTAGAAGAAATGTTATACGAGAATTCAAGGAACTAAAAGAATTGAAGCGTATGCGTAGAGAACCTCGTTGCACCAGCTGGTTTTGTGTTGCTGATACTGCCTTTCAGTATGAGGTATCTGATGACTCGATTCAAGCTGATTGGCGCCAAACATTTGCTGATACTGTGGGATTGTATCATCACTTTGAGTGGGCTGTGGGGACAAATGAAGGAAAATCAGACATTTTGGAATTTGAAAATGTTGGAACAAATGGTTGTGTCCAAGTCAATGGCCTAGATCTTGGTGGTTTGAGTGCATGCTTCATTACCCTCCGAGCTTGGAAATTAGATGGCCGGTGTACTGAATTTTGTGTTAAAGCTCATGCATTAAAGGGTCAAGAATGCGTACATTGCAGGTTAATTGTAGGGGATGGTTATGTTACAATCACAAAAGGAGAAAGTATAAAAAGATTCTTTGAGCATGCTGAAGAGGCGGAAGAAGAAGAGGATGATGATTTGATGGACAAAGACGGGAATGAGCTTGATGGAGAATGCACCCGTCCGCAAAAGCATGCGAAGAGCCCTGAACTTGCTCGAGAATTTCTTCTAGATGCTGCTACAGTTATATTCAAAGAGCAGGTAGAAAAAGCTTTCAGAGAGGGAACAGCACGTCAAAATGCGCACAGCATATTCGTTTGTCTTGCTCTAAAACTGCTGGAGGAAAGAGTTCATGTAGCATGCAAAGAGATCATCACATTAGAAAAGCAGACCAAACTTCTTGAGGAAGAAGAAAAGGAAAAACGTGAAGAAGAAGAGCGCAAAGAGAGGAAAAGAGCAAAAGAAAGGGAGAAAAAGCTTAGAAGAAAGGAAAGACTAAAAGGAAAGGATAAAAATAAAGAAGGAAAGTTTTCTGAGTCAAATGATGTTCCTAGCTCTCCTGAAGCCGTAAAGGAAGAACTGTCTGCACCCGCTGATGCAGAGCAAAATAACGCCCTTACATGCAAGAATTCAGTTGTTGCAACAGATGAGCCTAATTTATCAAATGGCGATTATCATGACATCCAAGATGAAGAGTTCTCAAGTGAGTGTAGTACTCTCAGAGCGCAAGACTGTGCTTATGATGACTATGATGGAGATATTGCATATGAACATGACAGGAATGGTACTAACAAAGTTGAACAACCAAAGTTTTATCGTCAAAGACTTAGATATAGGAAAGAGTTTCAAGTCGATATGTCTTCAAAGTGGTCTGACAGGTACCATAATGCAGTTGTTTCAGAAAATGGAGGAGGGATGGTAGGAAGATCTGAGCCAAGACACTATGGAGATAATTTCGGAACATCTTCCAGAGGAATCAGTGGATTGAACAGACAATCAAAAGTAAATGTTCCAAAAATCAATGGTCGAAATGTTGGTCATAATTGCAATGAGAAGTTCTATAGTTCCAACTACCGGATGAGTGAAAAATATGATTTCCATTCTTGCAGTTGTAGCCCAAACAGTAGAGTGACCAGAGGTAGTCGGGAGATGAAAGCCGTCAGTAAGTCTGAAACTGCAGTCGATACATCTAGGCAGTTTTACCGTGGTAGTAAGTATAATCAGGTAGACATGCATGAGAGTAGTGGAAGACCCAAAGGCAGAGTCTTCTCAGGCAACTATCCAAGTAGGGATATGCTTCAATCAAAGAAAGTTTGGGAGCCTACAGAATCACTCAATAAATATGCTCGTAGTAATTCAGACTCCGATGTTACGTTGAGGTCCACAGGTCAAGTATCTCAGTTTGATCCGGTCAGGTCGCCTGTTGATGAAGTTGATGATTCAGGTGAAATTGACAACAATGATAGTGATTTGAAGAGAAATGGAATGACCGAAGGCTGTCAGAATGATCTTGATGCAGAAGCTGAAGGATCTTGCAGCTCCACAGAAATTGGATCTGAGGAACCTGAAATAAGTGTGACGAGGCGATCTGCCATGAATAATTCTGATCACAGTCAAGGTAGCATTTCTAGTTCTGATAACTGCTCGTCATGTCTAAGCGAGGGCGATAATAATACAACCTCTTCAAACCGTGAAAATACAGAATTCTCAAATTCAGATTCAGAAGATGCTAGCCAAAAATACGAAGTAAGAGATAGTTCAACCTGCGTTGACAATGGCGTGTCTGACTGTTGTGAACTTGGGATCGAGAAAACTCATATTGCAAATGGTGAGGGTCTGTCAAGCAGGTCGCTATCTGTTCCATCCTTGGATGTAGTAGAAAGTGAAGCGTTTGTGAATCCTGTATTAGAAACTGCCCAAAATTTTGAAAATGGTTTTTCTTCCCCCAATGTTTGTTCTCAACCTGAAAGCATGCTTCCTCCAATGCCAAACCGAAACATACAATTTCCTGTGTTTCAGACTCCTTCAGCAATGGGTTACTACCATCAAAATCCAGTTTCATGGCCAACCGCTCCCGCAAATGGTTTGATGCCCTTTGTACACCCAAATAACTATTTATATGCTGGCCCTCTTGGATATAACTTAAATGAGGACCCACGCTTCTGCTTGCAGTATGGTGCCTTACAACAATCAACACCTCAATTTAACCCTGCAGCTATTCCAGTTTATCATCCAGTTGCCAGAGGTAAGGGCTTAAATGGAGAAGAACCGAGTCAAATTTCTATTCCAGCATCCATGCAAGATCATTTCAATGAATCCATTGCAGAAAGGGTTGTTCCAGTTGCAGCTAATTCCAGAAAAGCAGGACTGAATGGGGAAGACCGACTCAGTAATTCTGCCAAGTCACAAGAGAGTAACGGTGGTTTTTCCTTATTTCATTTTGGTGGGCCTGTAGCCTTTTCAAATGAACGCAAAACAGCTACTGCATCTTCAGACAATATTGGAGATTTGAACTCAAAAAGTTTGCATGATCAAGTCGAAAAAGATCATGGTTGCAATAAGAAAGAGACTGCTTTCATAGAGGAGTACAATTTGTTTGCGGCAAGTAATACCTTAAGGTTCACAATTTTCTAA
Protein sequence

>MsG0180003034.01.T01

MPGLPQFSNGFWSKNRDDVVGYNQLHKFWSELSPQARQELLRIDKQMLFEQARKNMYCSRCNGLLLEGFLQIVMYGKSLQPEGAGVQFPCGRPGGFKNQNNGGSSTSNGVRNEIQDPSVHPWGGLTTTREGSLTLMDCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRQSLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTAFQYEVSDDSIQADWRQTFADTVGLYHHFEWAVGTNEGKSDILEFENVGTNGCVQVNGLDLGGLSACFITLRAWKLDGRCTEFCVKAHALKGQECVHCRLIVGDGYVTITKGESIKRFFEHAEEAEEEEDDDLMDKDGNELDGECTRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIITLEKQTKLLEEEEKEKREEEERKERKRAKEREKKLRRKERLKGKDKNKEGKFSESNDVPSSPEAVKEELSAPADAEQNNALTCKNSVVATDEPNLSNGDYHDIQDEEFSSECSTLRAQDCAYDDYDGDIAYEHDRNGTNKVEQPKFYRQRLRYRKEFQVDMSSKWSDRYHNAVVSENGGGMVGRSEPRHYGDNFGTSSRGISGLNRQSKVNVPKINGRNVGHNCNEKFYSSNYRMSEKYDFHSCSCSPNSRVTRGSREMKAVSKSETAVDTSRQFYRGSKYNQVDMHESSGRPKGRVFSGNYPSRDMLQSKKVWEPTESLNKYARSNSDSDVTLRSTGQVSQFDPVRSPVDEVDDSGEIDNNDSDLKRNGMTEGCQNDLDAEAEGSCSSTEIGSEEPEISVTRRSAMNNSDHSQGSISSSDNCSSCLSEGDNNTTSSNRENTEFSNSDSEDASQKYEVRDSSTCVDNGVSDCCELGIEKTHIANGEGLSSRSLSVPSLDVVESEAFVNPVLETAQNFENGFSSPNVCSQPESMLPPMPNRNIQFPVFQTPSAMGYYHQNPVSWPTAPANGLMPFVHPNNYLYAGPLGYNLNEDPRFCLQYGALQQSTPQFNPAAIPVYHPVARGKGLNGEEPSQISIPASMQDHFNESIAERVVPVAANSRKAGLNGEDRLSNSAKSQESNGGFSLFHFGGPVAFSNERKTATASSDNIGDLNSKSLHDQVEKDHGCNKKETAFIEEYNLFAASNTLRFTIF*