AlfalfaGEDB | MsG0280010448.01

M. sativa cultivar ZhongmuNo.1 / MsG0280010448.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010448.01.T01	KEH38894.1	96.46	113	4	0	1	113	1	113	7.28E-63	217

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010448.01.T01	A0A072VA57	96.460	113	4	0	1	113	1	113	3.48e-63	217

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048058.01	MsG0280010448.01	0.844911	5.637654e-59	9.238041e-56
MsG0080048787.01	MsG0280010448.01	0.816629	5.010353e-52	3.568873e-49
MsG0180000001.01	MsG0280010448.01	0.812805	3.523275e-51	2.261745e-48
MsG0180000332.01	MsG0280010448.01	0.811286	7.555286e-51	4.657825e-48
MsG0180000555.01	MsG0280010448.01	0.821602	3.699318e-53	3.023379e-50
MsG0180000585.01	MsG0280010448.01	0.812179	4.828052e-51	3.048479e-48
MsG0180000604.01	MsG0280010448.01	0.802211	6.247829e-49	3.042779e-46
MsG0180000680.01	MsG0280010448.01	0.821837	3.265855e-53	2.687118e-50
MsG0180000702.01	MsG0280010448.01	0.801855	7.393079e-49	3.568254e-46
MsG0180000703.01	MsG0280010448.01	0.800720	1.262227e-48	5.919378e-46
MsG0180000741.01	MsG0280010448.01	0.836016	1.197894e-56	1.490470e-53
MsG0180000797.01	MsG0280010448.01	0.840027	1.113533e-57	1.566272e-54
MsG0180000821.01	MsG0280010448.01	0.813936	1.988233e-51	1.316009e-48
MsG0180001173.01	MsG0280010448.01	0.808048	3.751072e-50	2.122802e-47
MsG0180001237.01	MsG0280010448.01	0.814307	1.646727e-51	1.101095e-48
MsG0180001260.01	MsG0280010448.01	0.805105	1.567551e-49	8.222504e-47
MsG0180001294.01	MsG0280010448.01	0.828985	6.630097e-55	6.695165e-52
MsG0180001566.01	MsG0280010448.01	0.832031	1.191926e-55	1.316377e-52
MsG0180001662.01	MsG0280010448.01	0.834457	2.964127e-56	3.519859e-53
MsG0180001911.01	MsG0280010448.01	0.801223	9.962372e-49	4.732000e-46
MsG0180002071.01	MsG0280010448.01	0.830398	3.003733e-55	3.160934e-52
MsG0180002300.01	MsG0280010448.01	0.810505	1.114901e-50	6.732431e-48
MsG0180002975.01	MsG0280010448.01	0.810742	9.909379e-51	6.022055e-48
MsG0180003031.01	MsG0280010448.01	0.861496	9.846933e-64	2.791944e-60
MsG0180003034.01	MsG0280010448.01	0.805448	1.328449e-49	7.030022e-47
MsG0180003303.01	MsG0280010448.01	0.836699	8.028960e-57	1.019797e-53
MsG0180003444.01	MsG0280010448.01	0.819827	9.467462e-53	7.365111e-50
MsG0180003744.01	MsG0280010448.01	0.829235	5.765108e-55	5.865955e-52
MsG0180003807.01	MsG0280010448.01	0.816095	6.596457e-52	4.630838e-49
MsG0180003977.01	MsG0280010448.01	0.880278	6.260518e-70	3.505161e-66
MsG0180004005.01	MsG0280010448.01	0.833068	6.593320e-56	7.510150e-53
MsG0180004056.01	MsG0280010448.01	0.841529	4.497617e-58	6.627328e-55
MsG0180004372.01	MsG0280010448.01	0.823413	1.403916e-53	1.207846e-50
MsG0180004385.01	MsG0280010448.01	0.822107	2.827859e-53	2.344533e-50
MsG0180004437.01	MsG0280010448.01	0.815426	9.303583e-52	6.412224e-49
MsG0180004486.01	MsG0280010448.01	0.803792	2.943490e-49	1.492711e-46
MsG0180004598.01	MsG0280010448.01	0.823491	1.346024e-53	1.160754e-50
MsG0180004655.01	MsG0280010448.01	0.808123	3.614414e-50	2.049606e-47
MsG0180004767.01	MsG0280010448.01	0.813078	3.070031e-51	1.985239e-48
MsG0180005228.01	MsG0280010448.01	0.818737	1.677006e-52	1.265678e-49
MsG0180005407.01	MsG0280010448.01	0.840865	6.721167e-58	9.701669e-55
MsG0180005443.01	MsG0280010448.01	0.826313	2.905506e-54	2.715166e-51
MsG0180005445.01	MsG0280010448.01	0.809282	2.043598e-50	1.194904e-47
MsG0180005451.01	MsG0280010448.01	0.816397	5.647863e-52	3.997490e-49
MsG0180005493.01	MsG0280010448.01	0.806789	6.935264e-50	3.798243e-47
MsG0180005614.01	MsG0280010448.01	0.830693	2.543421e-55	2.699982e-52
MsG0180005765.01	MsG0280010448.01	0.815568	8.650900e-52	5.985653e-49
MsG0180005786.01	MsG0280010448.01	0.825602	4.285241e-54	3.924386e-51
MsG0180005878.01	MsG0280010448.01	0.806074	9.812636e-50	5.276847e-47
MsG0180005944.01	MsG0280010448.01	0.810659	1.032897e-50	6.263009e-48
MsG0180006098.01	MsG0280010448.01	0.896691	2.893651e-76	3.164837e-72
MsG0180006128.01	MsG0280010448.01	0.834580	2.761550e-56	3.291306e-53
MsG0180006235.01	MsG0280010448.01	0.815027	1.140866e-51	7.777883e-49
MsG0280006365.01	MsG0280010448.01	0.833188	6.155616e-56	7.036433e-53
MsG0280006367.01	MsG0280010448.01	0.840040	1.104628e-57	1.554418e-54
MsG0280006368.01	MsG0280010448.01	0.806448	8.185361e-50	4.444003e-47
MsG0280006595.01	MsG0280010448.01	0.800264	1.563718e-48	7.249083e-46
MsG0280006892.01	MsG0280010448.01	0.803878	2.825157e-49	1.435921e-46
MsG0280006935.01	MsG0280010448.01	0.804584	2.013924e-49	1.042303e-46
MsG0280007048.01	MsG0280010448.01	0.824578	7.481603e-54	6.654211e-51
MsG0280007087.01	MsG0280010448.01	0.804104	2.534899e-49	1.295854e-46
MsG0280007484.01	MsG0280010448.01	0.800938	1.139695e-48	5.374589e-46
MsG0280007529.01	MsG0280010448.01	0.800417	1.455547e-48	6.774002e-46
MsG0280007564.01	MsG0280010448.01	0.841360	4.981239e-58	7.301450e-55
MsG0280007585.01	MsG0280010448.01	0.819116	1.375198e-52	1.048851e-49
MsG0280007710.01	MsG0280010448.01	0.824017	1.013822e-53	8.872482e-51
MsG0280007775.01	MsG0280010448.01	0.807229	5.598209e-50	3.101214e-47
MsG0280008502.01	MsG0280010448.01	0.828162	1.047721e-54	1.033116e-51
MsG0280008758.01	MsG0280010448.01	0.818948	1.501653e-52	1.140109e-49
MsG0280010109.01	MsG0280010448.01	0.801035	1.088449e-48	5.145834e-46
MsG0280010153.01	MsG0280010448.01	0.812396	4.330517e-51	2.750470e-48
MsG0280010158.01	MsG0280010448.01	0.816343	5.806201e-52	4.103799e-49
MsG0280010389.01	MsG0280010448.01	0.800306	1.533049e-48	7.114793e-46
MsG0280010447.01	MsG0280010448.01	0.886866	2.354151e-72	1.710669e-68
MsG0280010448.01	MsG0280010614.01	0.802022	6.832406e-49	3.311522e-46
MsG0280010448.01	MsG0280010816.01	0.825508	4.512274e-54	4.120954e-51
MsG0280010448.01	MsG0280010976.01	0.825605	4.279344e-54	3.919175e-51
MsG0280010448.01	MsG0280011182.01	0.812941	3.289683e-51	2.119459e-48
MsG0280010448.01	MsG0280011201.01	0.821681	3.548725e-53	2.906861e-50
MsG0280010448.01	MsG0280011220.01	0.802267	6.082697e-49	2.966687e-46
MsG0280010448.01	MsG0280011293.01	0.832914	7.200801e-56	8.163477e-53
MsG0280010448.01	MsG0280011334.01	0.838368	2.997969e-57	4.006837e-54
MsG0280010448.01	MsG0280011336.01	0.820673	6.058731e-53	4.824923e-50
MsG0280010448.01	MsG0380011840.01	0.810143	1.334448e-50	7.981722e-48
MsG0280010448.01	MsG0380012020.01	0.825250	5.192148e-54	4.707395e-51
MsG0280010448.01	MsG0380012124.01	0.813081	3.065144e-51	1.982228e-48
MsG0280010448.01	MsG0380014365.01	0.810479	1.129187e-50	6.814035e-48
MsG0280010448.01	MsG0380014489.01	0.817620	3.000164e-52	2.195768e-49
MsG0280010448.01	MsG0380014541.01	0.841541	4.463319e-58	6.579398e-55
MsG0280010448.01	MsG0380014576.01	0.800620	1.322975e-48	6.188653e-46
MsG0280010448.01	MsG0380014880.01	0.810834	9.465118e-51	5.766237e-48
MsG0280010448.01	MsG0380015436.01	0.830306	3.163973e-55	3.320637e-52
MsG0280010448.01	MsG0380015512.01	0.800802	1.214601e-48	5.707871e-46
MsG0280010448.01	MsG0380015564.01	0.802054	6.731154e-49	3.265125e-46
MsG0280010448.01	MsG0380015614.01	0.809348	1.977887e-50	1.158553e-47
MsG0280010448.01	MsG0380015713.01	0.845279	4.484755e-59	7.435917e-56
MsG0280010448.01	MsG0380016397.01	0.821759	3.403690e-53	2.794163e-50
MsG0280010448.01	MsG0380016483.01	0.832204	1.080451e-55	1.199223e-52
MsG0280010448.01	MsG0380016561.01	0.803463	3.444910e-49	1.732268e-46
MsG0280010448.01	MsG0380016905.01	0.839128	1.906493e-57	2.607715e-54
MsG0280010448.01	MsG0380016971.01	0.824517	7.733933e-54	6.866105e-51
MsG0280010448.01	MsG0380017232.01	0.809251	2.075152e-50	1.212366e-47
MsG0280010448.01	MsG0380017719.01	0.830591	2.694832e-55	2.851891e-52
MsG0280010448.01	MsG0380017939.01	0.822755	1.999034e-53	1.688480e-50
MsG0280010448.01	MsG0480018462.01	0.857217	1.897209e-62	4.648055e-59
MsG0280010448.01	MsG0480018640.01	0.812654	3.803111e-51	2.431840e-48
MsG0280010448.01	MsG0480019289.01	0.807180	5.732145e-50	3.171394e-47
MsG0280010448.01	MsG0480019816.01	0.813852	2.075489e-51	1.370639e-48
MsG0280010448.01	MsG0480019970.01	0.808416	3.130756e-50	1.789084e-47
MsG0280010448.01	MsG0480020331.01	0.846150	2.602197e-59	4.436977e-56
MsG0280010448.01	MsG0480020416.01	0.815147	1.072718e-51	7.336785e-49
MsG0280010448.01	MsG0480020540.01	0.838913	2.168245e-57	2.946298e-54
MsG0280010448.01	MsG0480021240.01	0.836451	9.285511e-57	1.170683e-53
MsG0280010448.01	MsG0480021772.01	0.858489	7.956512e-63	2.034153e-59
MsG0280010448.01	MsG0480021900.01	0.822421	2.390068e-53	1.999626e-50
MsG0280010448.01	MsG0480022026.01	0.818886	1.551393e-52	1.175776e-49
MsG0280010448.01	MsG0480022115.01	0.805192	1.503011e-49	7.901524e-47
MsG0280010448.01	MsG0480022261.01	0.810905	9.137625e-51	5.577391e-48
MsG0280010448.01	MsG0480022318.01	0.842319	2.780580e-58	4.200381e-55
MsG0280010448.01	MsG0480022552.01	0.826991	2.002088e-54	1.907720e-51
MsG0280010448.01	MsG0480022678.01	0.845751	3.339697e-59	5.622728e-56
MsG0280010448.01	MsG0480022717.01	0.834551	2.807285e-56	3.342978e-53
MsG0280010448.01	MsG0480022719.01	0.801946	7.081590e-49	3.425629e-46
MsG0280010448.01	MsG0480023224.01	0.830885	2.282529e-55	2.436702e-52
MsG0280010448.01	MsG0480023377.01	0.804637	1.962898e-49	1.017276e-46
MsG0280010448.01	MsG0480023412.01	0.841702	4.048036e-58	5.996562e-55
MsG0280010448.01	MsG0480023554.01	0.814787	1.289419e-51	8.733677e-49
MsG0280010448.01	MsG0480023600.01	0.800706	1.270729e-48	5.956999e-46
MsG0280010448.01	MsG0480023659.01	0.803494	3.393938e-49	1.708017e-46
MsG0280010448.01	MsG0480023873.01	0.853179	2.835065e-61	6.072668e-58
MsG0280010448.01	MsG0580024353.01	0.807032	6.161800e-50	3.395999e-47
MsG0280010448.01	MsG0580024438.01	-0.800803	1.214024e-48	5.705380e-46
MsG0280010448.01	MsG0580024586.01	0.802188	6.316173e-49	3.074222e-46
MsG0280010448.01	MsG0580024618.01	0.864061	1.594525e-64	4.940149e-61
MsG0280010448.01	MsG0580024781.01	0.820304	7.360862e-53	5.802661e-50
MsG0280010448.01	MsG0580024960.01	0.834658	2.639301e-56	3.152570e-53
MsG0280010448.01	MsG0580025025.01	0.802241	6.160292e-49	3.002490e-46
MsG0280010448.01	MsG0580025184.01	0.825495	4.543430e-54	4.147937e-51
MsG0280010448.01	MsG0580025922.01	0.824822	6.555114e-54	5.871239e-51
MsG0280010448.01	MsG0580026664.01	0.812783	3.563657e-51	2.286377e-48
MsG0280010448.01	MsG0580029208.01	0.827012	1.978847e-54	1.886667e-51
MsG0280010448.01	MsG0580029629.01	0.818513	1.885119e-52	1.414015e-49
MsG0280010448.01	MsG0580029639.01	0.803147	4.005191e-49	1.997650e-46
MsG0280010448.01	MsG0580029658.01	0.840827	6.876554e-58	9.914721e-55
MsG0280010448.01	MsG0580029762.01	0.807561	4.760729e-50	2.660021e-47
MsG0280010448.01	MsG0580030003.01	0.808779	2.618495e-50	1.510531e-47
MsG0280010448.01	MsG0680030684.01	0.826189	3.109330e-54	2.895441e-51
MsG0280010448.01	MsG0680031301.01	0.827799	1.281152e-54	1.249778e-51
MsG0280010448.01	MsG0680032075.01	0.803993	2.673309e-49	1.362780e-46
MsG0280010448.01	MsG0680033302.01	0.817234	3.665400e-52	2.654429e-49
MsG0280010448.01	MsG0680033392.01	0.801811	7.548930e-49	3.639339e-46
MsG0280010448.01	MsG0680034037.01	0.808166	3.539680e-50	2.009567e-47
MsG0280010448.01	MsG0680034757.01	0.823499	1.340093e-53	1.155909e-50
MsG0280010448.01	MsG0680035306.01	0.801217	9.994996e-49	4.746687e-46
MsG0280010448.01	MsG0680035340.01	0.810917	9.083190e-51	5.546037e-48
MsG0280010448.01	MsG0680035476.01	0.845266	4.519388e-59	7.490508e-56
MsG0280010448.01	MsG0780036633.01	0.817054	4.023028e-52	2.899248e-49
MsG0280010448.01	MsG0780036663.01	0.825765	3.922206e-54	3.608566e-51
MsG0280010448.01	MsG0780036773.01	0.808166	3.539170e-50	2.009291e-47
MsG0280010448.01	MsG0780036845.01	0.802589	5.221676e-49	2.567727e-46
MsG0280010448.01	MsG0780038630.01	0.807549	4.788698e-50	2.674831e-47
MsG0280010448.01	MsG0780039717.01	0.821355	4.220556e-53	3.425667e-50
MsG0280010448.01	MsG0780039777.01	0.804438	2.160068e-49	1.113709e-46
MsG0280010448.01	MsG0780039845.01	0.815595	8.531418e-52	5.907509e-49
MsG0280010448.01	MsG0780040125.01	0.816873	4.417313e-52	3.167717e-49
MsG0280010448.01	MsG0780040312.01	0.828141	1.060261e-54	1.044817e-51
MsG0280010448.01	MsG0780040712.01	0.837383	5.369507e-57	6.962468e-54
MsG0280010448.01	MsG0780040742.01	0.802013	6.861025e-49	3.324652e-46
MsG0280010448.01	MsG0780040947.01	0.809964	1.458469e-50	8.683221e-48
MsG0280010448.01	MsG0780041033.01	0.833881	4.134323e-56	4.825126e-53
MsG0280010448.01	MsG0780041305.01	0.807115	5.918569e-50	3.268835e-47
MsG0280010448.01	MsG0780041432.01	0.806997	6.267612e-50	3.451111e-47
MsG0280010448.01	MsG0780041498.01	0.833584	4.903405e-56	5.671538e-53
MsG0280010448.01	MsG0780041754.01	0.809916	1.493524e-50	8.880608e-48
MsG0280010448.01	MsG0880042052.01	0.843508	1.342056e-58	2.104448e-55
MsG0280010448.01	MsG0880042206.01	0.800969	1.123010e-48	5.300246e-46
MsG0280010448.01	MsG0880042547.01	0.806435	8.239544e-50	4.471784e-47
MsG0280010448.01	MsG0880042760.01	0.815202	1.043362e-51	7.146592e-49
MsG0280010448.01	MsG0880043001.01	0.804617	1.982630e-49	1.026945e-46
MsG0280010448.01	MsG0880043162.01	0.824946	6.127644e-54	5.507813e-51
MsG0280010448.01	MsG0880043341.01	0.834002	3.855585e-56	4.516220e-53
MsG0280010448.01	MsG0880043804.01	0.808909	2.456939e-50	1.422213e-47
MsG0280010448.01	MsG0880044409.01	0.808684	2.744165e-50	1.579088e-47
MsG0280010448.01	MsG0880044917.01	0.832584	8.695475e-56	9.761831e-53
MsG0280010448.01	MsG0880045106.01	0.809190	2.138956e-50	1.247589e-47
MsG0280010448.01	MsG0880045165.01	0.816261	6.058627e-52	4.272490e-49
MsG0280010448.01	MsG0880045393.01	0.804587	2.011071e-49	1.040897e-46
MsG0280010448.01	MsG0880045448.01	0.805148	1.535016e-49	8.060905e-47
MsG0280010448.01	MsG0880045619.01	0.824163	9.367131e-54	8.232294e-51
MsG0280010448.01	MsG0880045754.01	0.803064	4.165969e-49	2.073393e-46
MsG0280010448.01	MsG0880045869.01	0.823499	1.340548e-53	1.156290e-50
MsG0280010448.01	MsG0880046027.01	0.829825	4.144084e-55	4.290356e-52
MsG0280010448.01	MsG0880046047.01	0.824820	6.562351e-54	5.877334e-51
MsG0280010448.01	MsG0880046404.01	0.804489	2.107752e-49	1.088154e-46
MsG0280010448.01	MsG0880047745.01	0.803047	4.199891e-49	2.089402e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010448.01.T01	MTR_2g084425	96.460	113	4	0	1	113	1	113	8.82e-67	217
MsG0280010448.01.T01	MTR_2g084425	96.460	113	4	0	1	113	1	113	1.11e-66	217

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010448.01.T01	AT2G27980	39.869	153	61	7	1	125	1	150	4.59e-16	73.6

Find 38 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACCGATTCAAATGAGTTTA+TGG	0.161340	2:-69797972	MsG0280010448.01.T01:CDS
ATGAGTTTATGGTTCTTTCT+AGG	0.201514	2:-69797961	MsG0280010448.01.T01:CDS
AAGAATGTTGAAAGGGAAAA+TGG	0.205543	2:-69797713	MsG0280010448.01.T01:CDS
CCGTAATGAGGGTCCGGTTC+TGG	0.288512	2:-69797843	MsG0280010448.01.T01:CDS
TTTCTTCTTCTTCCTTCAAA+AGG	0.351014	2:+69797636	None:intergenic
CCAACCGGCGTTTCCAGAAC+CGG	0.376249	2:+69797830	None:intergenic
AGAGTTTGCGTTTGCAATGA+AGG	0.408420	2:-69797918	MsG0280010448.01.T01:CDS
TCTGAGATCGATGGTTCGTT+GGG	0.410716	2:-69797890	MsG0280010448.01.T01:CDS
CCAGAACCGGACCCTCATTA+CGG	0.422256	2:+69797843	None:intergenic
TGGAAACGCCGGTTGGGAAA+AGG	0.425455	2:-69797823	MsG0280010448.01.T01:CDS
TTCTTCTTCTTCCTTCAAAA+GGG	0.425646	2:+69797637	None:intergenic
AGAATGTTGAAAGGGAAAAT+GGG	0.428531	2:-69797712	MsG0280010448.01.T01:CDS
AACCATAAACTCATTTGAAT+CGG	0.438511	2:+69797970	None:intergenic
TGAGTTTATGGTTCTTTCTA+GGG	0.447578	2:-69797960	MsG0280010448.01.T01:CDS
CGGTTCTGGAAACGCCGGTT+GGG	0.454316	2:-69797829	MsG0280010448.01.T01:CDS
ATCTGAGATCGATGGTTCGT+TGG	0.456099	2:-69797891	MsG0280010448.01.T01:CDS
GTTCTTTCTAGGGTTAGAAC+AGG	0.463394	2:-69797950	MsG0280010448.01.T01:CDS
GGAAACGCCGGTTGGGAAAA+GGG	0.480645	2:-69797822	MsG0280010448.01.T01:CDS
ATGGTTCGTTGGGTCGAACC+AGG	0.484401	2:-69797880	MsG0280010448.01.T01:CDS
ACGGTTCTTACTACCACCCC+TGG	0.500779	2:+69797862	None:intergenic
CCGGTTCTGGAAACGCCGGT+TGG	0.511153	2:-69797830	MsG0280010448.01.T01:CDS
CATAACAACATCATCCAAAC+CGG	0.512225	2:+69797790	None:intergenic
TAAGAACCGTAATGAGGGTC+CGG	0.518478	2:-69797849	MsG0280010448.01.T01:CDS
AAGAGGTTAAGAATGTTGAA+AGG	0.522341	2:-69797721	MsG0280010448.01.T01:CDS
AGAGGTTAAGAATGTTGAAA+GGG	0.531488	2:-69797720	MsG0280010448.01.T01:CDS
TGGTTCGTTGGGTCGAACCA+GGG	0.550602	2:-69797879	MsG0280010448.01.T01:CDS
TGGTAGTAAGAACCGTAATG+AGG	0.555759	2:-69797855	MsG0280010448.01.T01:CDS
GGTTCGTTGGGTCGAACCAG+GGG	0.564985	2:-69797878	MsG0280010448.01.T01:CDS
TATAATCATTCTATGGCGAA+AGG	0.574673	2:-69797995	None:intergenic
GGATCTTGTTAGCGATGAAG+AGG	0.578002	2:-69797738	MsG0280010448.01.T01:CDS
AGAGGCTAAGAGTGATGTTG+TGG	0.581325	2:-69797759	MsG0280010448.01.T01:CDS
GGATGATGTTGTTATGAGTG+AGG	0.582454	2:-69797783	MsG0280010448.01.T01:CDS
TGTTGTTATGAGTGAGGAAG+AGG	0.584412	2:-69797777	MsG0280010448.01.T01:CDS
TCGTTGGGTCGAACCAGGGG+TGG	0.590035	2:-69797875	MsG0280010448.01.T01:CDS
GGTAGTAAGAACCGTAATGA+GGG	0.606032	2:-69797854	MsG0280010448.01.T01:CDS
AAGGCTCAATCTGAGATCGA+TGG	0.644296	2:-69797899	MsG0280010448.01.T01:CDS
GGGTCCGGTTCTGGAAACGC+CGG	0.690311	2:-69797834	MsG0280010448.01.T01:CDS
TATTGATGTGAAGAGTGATG+TGG	0.737875	2:-69797672	MsG0280010448.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AACCATAAACTCATTTGAAT+CGG	+	Chr2:69797644-69797663	None:intergenic	25.0%
	AAGAATGTTGAAAGGGAAAA+TGG	-	Chr2:69797898-69797917	MsG0280010448.01.T01:CDS	30.0%
	AAGAGGTTAAGAATGTTGAA+AGG	-	Chr2:69797890-69797909	MsG0280010448.01.T01:CDS	30.0%
	AGAATGTTGAAAGGGAAAAT+GGG	-	Chr2:69797899-69797918	MsG0280010448.01.T01:CDS	30.0%
	AGAGGTTAAGAATGTTGAAA+GGG	-	Chr2:69797891-69797910	MsG0280010448.01.T01:CDS	30.0%
	ATGAGTTTATGGTTCTTTCT+AGG	-	Chr2:69797650-69797669	MsG0280010448.01.T01:CDS	30.0%
	TGAGTTTATGGTTCTTTCTA+GGG	-	Chr2:69797651-69797670	MsG0280010448.01.T01:CDS	30.0%
	TTCTTCTTCTTCCTTCAAAA+GGG	+	Chr2:69797977-69797996	None:intergenic	30.0%
	TTTCTTCTTCTTCCTTCAAA+AGG	+	Chr2:69797978-69797997	None:intergenic	30.0%
!	AACCGATTCAAATGAGTTTA+TGG	-	Chr2:69797639-69797658	MsG0280010448.01.T01:CDS	30.0%
	AAGGGTAAAAAAAACCGGTT+TGG	-	Chr2:69797807-69797826	MsG0280010448.01.T01:CDS	35.0%
	CATAACAACATCATCCAAAC+CGG	+	Chr2:69797824-69797843	None:intergenic	35.0%
	GGGAAAAGGGTAAAAAAAAC+CGG	-	Chr2:69797802-69797821	MsG0280010448.01.T01:CDS	35.0%
	TATTGATGTGAAGAGTGATG+TGG	-	Chr2:69797939-69797958	MsG0280010448.01.T01:CDS	35.0%
!	TGATGAAGAAACCCTTTTGA+AGG	-	Chr2:69797963-69797982	MsG0280010448.01.T01:CDS	35.0%
!!!	TTTTTTACCCTTTTCCCAAC+CGG	+	Chr2:69797799-69797818	None:intergenic	35.0%
	AGAGTTTGCGTTTGCAATGA+AGG	-	Chr2:69797693-69797712	MsG0280010448.01.T01:CDS	40.0%
	GGATGATGTTGTTATGAGTG+AGG	-	Chr2:69797828-69797847	MsG0280010448.01.T01:CDS	40.0%
	GGTAGTAAGAACCGTAATGA+GGG	-	Chr2:69797757-69797776	MsG0280010448.01.T01:CDS	40.0%
	TGGTAGTAAGAACCGTAATG+AGG	-	Chr2:69797756-69797775	MsG0280010448.01.T01:CDS	40.0%
	TGTTGTTATGAGTGAGGAAG+AGG	-	Chr2:69797834-69797853	MsG0280010448.01.T01:CDS	40.0%
!!	GTTCTTTCTAGGGTTAGAAC+AGG	-	Chr2:69797661-69797680	MsG0280010448.01.T01:CDS	40.0%
	AGAGGCTAAGAGTGATGTTG+TGG	-	Chr2:69797852-69797871	MsG0280010448.01.T01:CDS	45.0%
	GGATCTTGTTAGCGATGAAG+AGG	-	Chr2:69797873-69797892	MsG0280010448.01.T01:CDS	45.0%
	TAAGAACCGTAATGAGGGTC+CGG	-	Chr2:69797762-69797781	MsG0280010448.01.T01:CDS	45.0%
!	AAGGCTCAATCTGAGATCGA+TGG	-	Chr2:69797712-69797731	MsG0280010448.01.T01:CDS	45.0%
!	ATCTGAGATCGATGGTTCGT+TGG	-	Chr2:69797720-69797739	MsG0280010448.01.T01:CDS	45.0%
!	TCTGAGATCGATGGTTCGTT+GGG	-	Chr2:69797721-69797740	MsG0280010448.01.T01:CDS	45.0%
	ACGGTTCTTACTACCACCCC+TGG	+	Chr2:69797752-69797771	None:intergenic	55.0%
	ATGGTTCGTTGGGTCGAACC+AGG	-	Chr2:69797731-69797750	MsG0280010448.01.T01:CDS	55.0%
	CCAGAACCGGACCCTCATTA+CGG	+	Chr2:69797771-69797790	None:intergenic	55.0%
	TGGTTCGTTGGGTCGAACCA+GGG	-	Chr2:69797732-69797751	MsG0280010448.01.T01:CDS	55.0%
!	GGAAACGCCGGTTGGGAAAA+GGG	-	Chr2:69797789-69797808	MsG0280010448.01.T01:CDS	55.0%
!	TGGAAACGCCGGTTGGGAAA+AGG	-	Chr2:69797788-69797807	MsG0280010448.01.T01:CDS	55.0%
	CCAACCGGCGTTTCCAGAAC+CGG	+	Chr2:69797784-69797803	None:intergenic	60.0%
	CCGTAATGAGGGTCCGGTTC+TGG	-	Chr2:69797768-69797787	MsG0280010448.01.T01:CDS	60.0%
	GGTTCGTTGGGTCGAACCAG+GGG	-	Chr2:69797733-69797752	MsG0280010448.01.T01:CDS	60.0%
!!	CGGTTCTGGAAACGCCGGTT+GGG	-	Chr2:69797782-69797801	MsG0280010448.01.T01:CDS	60.0%
	TCGTTGGGTCGAACCAGGGG+TGG	-	Chr2:69797736-69797755	MsG0280010448.01.T01:CDS	65.0%
!!	CCGGTTCTGGAAACGCCGGT+TGG	-	Chr2:69797781-69797800	MsG0280010448.01.T01:CDS	65.0%
!!	GGGTCCGGTTCTGGAAACGC+CGG	-	Chr2:69797777-69797796	MsG0280010448.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	69797628	69798005	69797628	ID=MsG0280010448.01;Name=MsG0280010448.01
Chr2	mRNA	69797628	69798005	69797628	ID=MsG0280010448.01.T01;Parent=MsG0280010448.01;Name=MsG0280010448.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|125
Chr2	exon	69797628	69798005	69797628	ID=MsG0280010448.01.T01:exon:9876;Parent=MsG0280010448.01.T01
Chr2	CDS	69797628	69798005	69797628	ID=MsG0280010448.01.T01:cds;Parent=MsG0280010448.01.T01

Gene Sequence

>MsG0280010448.01.T01

ATGGCGAAAGGAACCGATTCAAATGAGTTTATGGTTCTTTCTAGGGTTAGAACAGGTTTGAAACGAGAGTTTGCGTTTGCAATGAAGGCTCAATCTGAGATCGATGGTTCGTTGGGTCGAACCAGGGGTGGTAGTAAGAACCGTAATGAGGGTCCGGTTCTGGAAACGCCGGTTGGGAAAAGGGTAAAAAAAACCGGTTTGGATGATGTTGTTATGAGTGAGGAAGAGGCTAAGAGTGATGTTGTGGATCTTGTTAGCGATGAAGAGGTTAAGAATGTTGAAAGGGAAAATGGGTTTTTGTCAAAATCTGATATTGATGTGAAGAGTGATGTGGTTGATGAAGAAACCCTTTTGAAGGAAGAAGAAGAAAAGTTGTGA

Protein sequence

>MsG0280010448.01.T01

MAKGTDSNEFMVLSRVRTGLKREFAFAMKAQSEIDGSLGRTRGGSKNRNEGPVLETPVGKRVKKTGLDDVVMSEEEAKSDVVDLVSDEEVKNVERENGFLSKSDIDVKSDVVDEETLLKEEEEKL*