Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031063.01.T01 | XP_013451171.1 | 99.459 | 555 | 3 | 0 | 1 | 555 | 1 | 555 | 0 | 1154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031063.01.T01 | Q9FWA4 | 74.679 | 545 | 138 | 0 | 11 | 555 | 17 | 561 | 0 | 844 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031063.01.T01 | G7ZV05 | 99.459 | 555 | 3 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1154 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048058.01 | MsG0680031063.01 | 0.842103 | 3.171700e-58 | 4.758877e-55 |
| MsG0180000101.01 | MsG0680031063.01 | 0.802251 | 6.129112e-49 | 2.988130e-46 |
| MsG0180000144.01 | MsG0680031063.01 | 0.804650 | 1.951177e-49 | 1.011555e-46 |
| MsG0180000146.01 | MsG0680031063.01 | 0.814634 | 1.393930e-51 | 9.402939e-49 |
| MsG0180000364.01 | MsG0680031063.01 | 0.807497 | 4.910899e-50 | 2.739553e-47 |
| MsG0180000555.01 | MsG0680031063.01 | 0.819415 | 1.175329e-52 | 9.038639e-50 |
| MsG0180000741.01 | MsG0680031063.01 | 0.832140 | 1.120555e-55 | 1.241370e-52 |
| MsG0180001173.01 | MsG0680031063.01 | 0.817517 | 3.164725e-52 | 2.309777e-49 |
| MsG0180001311.01 | MsG0680031063.01 | 0.804024 | 2.634633e-49 | 1.344087e-46 |
| MsG0180001315.01 | MsG0680031063.01 | 0.819850 | 9.352768e-53 | 7.280489e-50 |
| MsG0180001566.01 | MsG0680031063.01 | 0.808940 | 2.418819e-50 | 1.401327e-47 |
| MsG0180001911.01 | MsG0680031063.01 | 0.802590 | 5.219095e-49 | 2.566512e-46 |
| MsG0180002300.01 | MsG0680031063.01 | 0.801272 | 9.735787e-49 | 4.630121e-46 |
| MsG0180003034.01 | MsG0680031063.01 | 0.820172 | 7.892059e-53 | 6.199106e-50 |
| MsG0180003181.01 | MsG0680031063.01 | 0.834331 | 3.188360e-56 | 3.771823e-53 |
| MsG0180003190.01 | MsG0680031063.01 | 0.831675 | 1.459255e-55 | 1.594817e-52 |
| MsG0180003303.01 | MsG0680031063.01 | 0.848356 | 6.456320e-60 | 1.181673e-56 |
| MsG0180003744.01 | MsG0680031063.01 | 0.841216 | 5.434273e-58 | 7.929446e-55 |
| MsG0180003799.01 | MsG0680031063.01 | 0.820006 | 8.614893e-53 | 6.735596e-50 |
| MsG0180003807.01 | MsG0680031063.01 | 0.811812 | 5.805612e-51 | 3.629375e-48 |
| MsG0180004016.01 | MsG0680031063.01 | 0.812437 | 4.242427e-51 | 2.697505e-48 |
| MsG0180004056.01 | MsG0680031063.01 | 0.827521 | 1.494217e-54 | 1.445964e-51 |
| MsG0180004437.01 | MsG0680031063.01 | 0.872981 | 2.093171e-67 | 8.932297e-64 |
| MsG0180004486.01 | MsG0680031063.01 | 0.824459 | 7.978459e-54 | 7.070819e-51 |
| MsG0180004598.01 | MsG0680031063.01 | 0.834869 | 2.335553e-56 | 2.807585e-53 |
| MsG0180004645.01 | MsG0680031063.01 | 0.850144 | 2.053712e-60 | 3.984241e-57 |
| MsG0180005228.01 | MsG0680031063.01 | 0.818417 | 1.982213e-52 | 1.483012e-49 |
| MsG0180005234.01 | MsG0680031063.01 | 0.818279 | 2.129323e-52 | 1.586829e-49 |
| MsG0180005304.01 | MsG0680031063.01 | 0.802639 | 5.098752e-49 | 2.510402e-46 |
| MsG0180005407.01 | MsG0680031063.01 | 0.800761 | 1.238144e-48 | 5.812441e-46 |
| MsG0180005443.01 | MsG0680031063.01 | 0.823752 | 1.169707e-53 | 1.016271e-50 |
| MsG0180005451.01 | MsG0680031063.01 | 0.849642 | 2.836918e-60 | 5.413580e-57 |
| MsG0180005493.01 | MsG0680031063.01 | 0.817107 | 3.915025e-52 | 2.825293e-49 |
| MsG0180005765.01 | MsG0680031063.01 | 0.816143 | 6.436505e-52 | 4.524244e-49 |
| MsG0180005985.01 | MsG0680031063.01 | 0.844522 | 7.175836e-59 | 1.161593e-55 |
| MsG0180006050.01 | MsG0680031063.01 | 0.813311 | 2.729850e-51 | 1.776535e-48 |
| MsG0280006367.01 | MsG0680031063.01 | 0.822910 | 1.839343e-53 | 1.560359e-50 |
| MsG0280006368.01 | MsG0680031063.01 | 0.853896 | 1.764881e-61 | 3.871943e-58 |
| MsG0280010735.01 | MsG0680031063.01 | 0.811311 | 7.461002e-51 | 4.602659e-48 |
| MsG0280010816.01 | MsG0680031063.01 | 0.807160 | 5.790421e-50 | 3.201854e-47 |
| MsG0280010866.01 | MsG0680031063.01 | 0.823647 | 1.237580e-53 | 1.071976e-50 |
| MsG0280010901.01 | MsG0680031063.01 | 0.826870 | 2.139579e-54 | 2.031470e-51 |
| MsG0280010976.01 | MsG0680031063.01 | 0.829199 | 5.884147e-55 | 5.980846e-52 |
| MsG0280011075.01 | MsG0680031063.01 | 0.842621 | 2.312227e-58 | 3.525763e-55 |
| MsG0280011423.01 | MsG0680031063.01 | 0.822539 | 2.244493e-53 | 1.884144e-50 |
| MsG0380012458.01 | MsG0680031063.01 | 0.800947 | 1.134924e-48 | 5.353347e-46 |
| MsG0380013579.01 | MsG0680031063.01 | 0.812916 | 3.332365e-51 | 2.145537e-48 |
| MsG0380014576.01 | MsG0680031063.01 | 0.868368 | 6.878593e-66 | 2.481984e-62 |
| MsG0680031063.01 | MsG0680031301.01 | 0.839066 | 1.978421e-57 | 2.701093e-54 |
| MsG0680031063.01 | MsG0680031699.01 | 0.808847 | 2.532457e-50 | 1.463555e-47 |
| MsG0680031063.01 | MsG0680034757.01 | 0.834524 | 2.852247e-56 | 3.393756e-53 |
| MsG0680031063.01 | MsG0680035306.01 | 0.805165 | 1.523106e-49 | 8.001580e-47 |
| MsG0680031063.01 | MsG0780036633.01 | 0.823938 | 1.057549e-53 | 9.235883e-51 |
| MsG0680031063.01 | MsG0780036845.01 | 0.846997 | 1.527444e-59 | 2.676650e-56 |
| MsG0680031063.01 | MsG0780037755.01 | 0.830249 | 3.265538e-55 | 3.422006e-52 |
| MsG0680031063.01 | MsG0780039587.01 | 0.865265 | 6.696082e-65 | 2.165159e-61 |
| MsG0680031063.01 | MsG0780039717.01 | 0.825020 | 5.885840e-54 | 5.301705e-51 |
| MsG0680031063.01 | MsG0780040125.01 | 0.808663 | 2.772354e-50 | 1.594444e-47 |
| MsG0680031063.01 | MsG0780040312.01 | 0.827584 | 1.443113e-54 | 1.398965e-51 |
| MsG0680031063.01 | MsG0780040519.01 | 0.806322 | 8.702406e-50 | 4.709455e-47 |
| MsG0680031063.01 | MsG0780040687.01 | 0.821630 | 3.646247e-53 | 2.982324e-50 |
| MsG0680031063.01 | MsG0780040742.01 | 0.844701 | 6.421270e-59 | 1.045241e-55 |
| MsG0680031063.01 | MsG0780040854.01 | 0.831441 | 1.666816e-55 | 1.808903e-52 |
| MsG0680031063.01 | MsG0780040856.01 | 0.801628 | 8.231723e-49 | 3.949926e-46 |
| MsG0680031063.01 | MsG0780041183.01 | 0.834031 | 3.792151e-56 | 4.445517e-53 |
| MsG0680031063.01 | MsG0780041370.01 | 0.814871 | 1.235323e-51 | 8.385863e-49 |
| MsG0680031063.01 | MsG0780041423.01 | 0.807376 | 5.209629e-50 | 2.897000e-47 |
| MsG0680031063.01 | MsG0880042206.01 | 0.870896 | 1.031568e-66 | 4.081100e-63 |
| MsG0680031063.01 | MsG0880042329.01 | 0.829884 | 4.009751e-55 | 4.157968e-52 |
| MsG0680031063.01 | MsG0880042399.01 | -0.828169 | 1.044129e-54 | 1.029728e-51 |
| MsG0680031063.01 | MsG0880042760.01 | 0.817157 | 3.814255e-52 | 2.756475e-49 |
| MsG0680031063.01 | MsG0880043162.01 | 0.850767 | 1.372412e-60 | 2.717440e-57 |
| MsG0680031063.01 | MsG0880043194.01 | 0.811341 | 7.349141e-51 | 4.537213e-48 |
| MsG0680031063.01 | MsG0880043341.01 | 0.818470 | 1.927179e-52 | 1.443955e-49 |
| MsG0680031063.01 | MsG0880043533.01 | 0.815084 | 1.108045e-51 | 7.565410e-49 |
| MsG0680031063.01 | MsG0880044546.01 | 0.811563 | 6.577695e-51 | 4.085063e-48 |
| MsG0680031063.01 | MsG0880045165.01 | 0.835898 | 1.283474e-56 | 1.591281e-53 |
| MsG0680031063.01 | MsG0880045329.01 | 0.841946 | 3.490752e-58 | 5.211112e-55 |
| MsG0680031063.01 | MsG0880045448.01 | 0.842014 | 3.349205e-58 | 5.010556e-55 |
| MsG0680031063.01 | MsG0880045716.01 | 0.805756 | 1.144489e-49 | 6.105081e-47 |
| MsG0680031063.01 | MsG0880045769.01 | 0.804170 | 2.456953e-49 | 1.258091e-46 |
| MsG0680031063.01 | MsG0880046068.01 | 0.839386 | 1.634096e-57 | 2.253276e-54 |
| MsG0680031063.01 | MsG0880046074.01 | 0.803875 | 2.829301e-49 | 1.437905e-46 |
| MsG0680031063.01 | MsG0880046163.01 | 0.819663 | 1.031696e-52 | 7.989151e-50 |
| MsG0680031063.01 | MsG0880046404.01 | 0.813293 | 2.754301e-51 | 1.791562e-48 |
| MsG0680031063.01 | MsG0880046684.01 | 0.819687 | 1.018797e-52 | 7.894487e-50 |
| MsG0680031063.01 | MsG0880047289.01 | 0.803755 | 2.995912e-49 | 1.517848e-46 |
| MsG0480018467.01 | MsG0680031063.01 | 0.845177 | 4.776834e-59 | 7.893862e-56 |
| MsG0480018479.01 | MsG0680031063.01 | 0.804068 | 2.578921e-49 | 1.317200e-46 |
| MsG0480020331.01 | MsG0680031063.01 | 0.818946 | 1.503497e-52 | 1.141447e-49 |
| MsG0480020530.01 | MsG0680031063.01 | 0.818359 | 2.043029e-52 | 1.526014e-49 |
| MsG0480020540.01 | MsG0680031063.01 | 0.803695 | 3.083743e-49 | 1.559914e-46 |
| MsG0480020719.01 | MsG0680031063.01 | 0.821003 | 5.086638e-53 | 4.088989e-50 |
| MsG0480020917.01 | MsG0680031063.01 | 0.809992 | 1.438323e-50 | 8.569616e-48 |
| MsG0480021152.01 | MsG0680031063.01 | 0.800681 | 1.285932e-48 | 6.024528e-46 |
| MsG0480021216.01 | MsG0680031063.01 | 0.849340 | 3.443464e-60 | 6.507985e-57 |
| MsG0480021432.01 | MsG0680031063.01 | 0.818597 | 1.804350e-52 | 1.356489e-49 |
| MsG0480021900.01 | MsG0680031063.01 | 0.812993 | 3.204662e-51 | 2.067672e-48 |
| MsG0480021986.01 | MsG0680031063.01 | 0.804401 | 2.198546e-49 | 1.132465e-46 |
| MsG0480022094.01 | MsG0680031063.01 | 0.801906 | 7.217120e-49 | 3.487780e-46 |
| MsG0480022228.01 | MsG0680031063.01 | 0.835208 | 1.918585e-56 | 2.330085e-53 |
| MsG0480022464.01 | MsG0680031063.01 | 0.810857 | 9.355436e-51 | 5.703000e-48 |
| MsG0480022552.01 | MsG0680031063.01 | 0.837434 | 5.209731e-57 | 6.766443e-54 |
| MsG0480022678.01 | MsG0680031063.01 | 0.805125 | 1.552035e-49 | 8.145585e-47 |
| MsG0480022717.01 | MsG0680031063.01 | 0.813561 | 2.404632e-51 | 1.575552e-48 |
| MsG0480022719.01 | MsG0680031063.01 | 0.844036 | 9.690910e-59 | 1.545084e-55 |
| MsG0480022897.01 | MsG0680031063.01 | 0.809681 | 1.677956e-50 | 9.915902e-48 |
| MsG0480023240.01 | MsG0680031063.01 | 0.856688 | 2.717123e-62 | 6.537860e-59 |
| MsG0580024157.01 | MsG0680031063.01 | 0.808292 | 3.327664e-50 | 1.895413e-47 |
| MsG0580024311.01 | MsG0680031063.01 | 0.812726 | 3.666641e-51 | 2.349102e-48 |
| MsG0580024323.01 | MsG0680031063.01 | 0.811456 | 6.939854e-51 | 4.297873e-48 |
| MsG0580024536.01 | MsG0680031063.01 | 0.801479 | 8.829960e-49 | 4.221280e-46 |
| MsG0580024960.01 | MsG0680031063.01 | 0.818462 | 1.935868e-52 | 1.450150e-49 |
| MsG0580025128.01 | MsG0680031063.01 | 0.806128 | 9.560689e-50 | 5.148442e-47 |
| MsG0580025900.01 | MsG0680031063.01 | 0.804623 | 1.976570e-49 | 1.023961e-46 |
| MsG0580025922.01 | MsG0680031063.01 | 0.836620 | 8.411804e-57 | 1.065773e-53 |
| MsG0380015436.01 | MsG0680031063.01 | 0.801041 | 1.085417e-48 | 5.132315e-46 |
| MsG0380015607.01 | MsG0680031063.01 | 0.838967 | 2.099000e-57 | 2.856973e-54 |
| MsG0380015702.01 | MsG0680031063.01 | 0.833812 | 4.300680e-56 | 5.008909e-53 |
| MsG0380016589.01 | MsG0680031063.01 | 0.838705 | 2.453425e-57 | 3.313235e-54 |
| MsG0380016941.01 | MsG0680031063.01 | 0.800152 | 1.647892e-48 | 7.617402e-46 |
| MsG0380017210.01 | MsG0680031063.01 | 0.840193 | 1.007899e-57 | 1.424855e-54 |
| MsG0380017401.01 | MsG0680031063.01 | 0.801875 | 7.325304e-49 | 3.537371e-46 |
| MsG0380017476.01 | MsG0680031063.01 | 0.832796 | 7.705807e-56 | 8.705091e-53 |
| MsG0380017719.01 | MsG0680031063.01 | 0.826378 | 2.802851e-54 | 2.624280e-51 |
| MsG0380017797.01 | MsG0680031063.01 | 0.840109 | 1.059815e-57 | 1.494448e-54 |
| MsG0380017939.01 | MsG0680031063.01 | 0.805731 | 1.158545e-49 | 6.176142e-47 |
| MsG0480018235.01 | MsG0680031063.01 | 0.809537 | 1.801470e-50 | 1.060505e-47 |
| MsG0580027464.01 | MsG0680031063.01 | 0.805971 | 1.031841e-49 | 5.534313e-47 |
| MsG0580029036.01 | MsG0680031063.01 | 0.816215 | 6.203061e-52 | 4.368810e-49 |
| MsG0580029208.01 | MsG0680031063.01 | 0.819577 | 1.079772e-52 | 8.341699e-50 |
| MsG0580029231.01 | MsG0680031063.01 | 0.839394 | 1.626730e-57 | 2.243561e-54 |
| MsG0580029371.01 | MsG0680031063.01 | 0.816886 | 4.387723e-52 | 3.147423e-49 |
| MsG0580029628.01 | MsG0680031063.01 | 0.823404 | 1.410915e-53 | 1.213538e-50 |
| MsG0580029639.01 | MsG0680031063.01 | 0.813716 | 2.223086e-51 | 1.462807e-48 |
| MsG0580029658.01 | MsG0680031063.01 | 0.810251 | 1.264581e-50 | 7.585393e-48 |
| MsG0580029801.01 | MsG0680031063.01 | 0.831623 | 1.502740e-55 | 1.639793e-52 |
| MsG0580030003.01 | MsG0680031063.01 | 0.816060 | 6.717670e-52 | 4.711223e-49 |
| MsG0580030100.01 | MsG0680031063.01 | 0.892330 | 1.752944e-74 | 1.594823e-70 |
| MsG0680030684.01 | MsG0680031063.01 | 0.821215 | 4.545200e-53 | 3.675124e-50 |
| MsG0280006679.01 | MsG0680031063.01 | 0.830375 | 3.043097e-55 | 3.200351e-52 |
| MsG0280007011.01 | MsG0680031063.01 | 0.823418 | 1.400211e-53 | 1.204835e-50 |
| MsG0280007048.01 | MsG0680031063.01 | 0.820413 | 6.951038e-53 | 5.496450e-50 |
| MsG0280007087.01 | MsG0680031063.01 | 0.801994 | 6.922179e-49 | 3.352634e-46 |
| MsG0280007109.01 | MsG0680031063.01 | 0.803843 | 2.872237e-49 | 1.458541e-46 |
| MsG0280007487.01 | MsG0680031063.01 | 0.801890 | 7.273131e-49 | 3.513530e-46 |
| MsG0280007726.01 | MsG0680031063.01 | 0.840540 | 8.176255e-58 | 1.168334e-54 |
| MsG0280008134.01 | MsG0680031063.01 | 0.803612 | 3.208679e-49 | 1.619659e-46 |
| MsG0280009270.01 | MsG0680031063.01 | 0.800045 | 1.732720e-48 | 7.987811e-46 |
| MsG0280009417.01 | MsG0680031063.01 | 0.835910 | 1.274070e-56 | 1.580196e-53 |
| MsG0280009774.01 | MsG0680031063.01 | 0.834390 | 3.082073e-56 | 3.652366e-53 |
| MsG0280010022.01 | MsG0680031063.01 | 0.803184 | 3.934295e-49 | 1.964237e-46 |
| MsG0280010153.01 | MsG0680031063.01 | 0.808597 | 2.864883e-50 | 1.644813e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031063.01.T01 | MTR_6g016380 | 99.459 | 555 | 3 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1154 |
| MsG0680031063.01.T01 | MTR_7g055600 | 71.198 | 434 | 120 | 4 | 125 | 555 | 3 | 434 | 0.0 | 650 |
| MsG0680031063.01.T01 | MTR_7g057530 | 71.198 | 434 | 120 | 4 | 125 | 555 | 3 | 434 | 0.0 | 650 |
| MsG0680031063.01.T01 | MTR_7g075840 | 48.298 | 470 | 223 | 8 | 85 | 553 | 212 | 662 | 2.14e-145 | 434 |
| MsG0680031063.01.T01 | MTR_2g027740 | 49.015 | 406 | 202 | 4 | 149 | 553 | 264 | 665 | 1.45e-143 | 429 |
| MsG0680031063.01.T01 | MTR_3g107930 | 50.518 | 386 | 189 | 2 | 169 | 553 | 202 | 586 | 3.69e-143 | 426 |
| MsG0680031063.01.T01 | MTR_3g107930 | 50.518 | 386 | 189 | 2 | 169 | 553 | 279 | 663 | 3.41e-142 | 426 |
| MsG0680031063.01.T01 | MTR_8g092000 | 46.814 | 408 | 207 | 5 | 149 | 554 | 180 | 579 | 2.47e-136 | 408 |
| MsG0680031063.01.T01 | MTR_8g033360 | 47.368 | 437 | 210 | 8 | 85 | 519 | 179 | 597 | 4.81e-134 | 406 |
| MsG0680031063.01.T01 | MTR_2g015550 | 42.083 | 480 | 255 | 9 | 78 | 553 | 72 | 532 | 2.60e-132 | 396 |
| MsG0680031063.01.T01 | MTR_4g109890 | 45.209 | 407 | 214 | 5 | 149 | 551 | 131 | 532 | 9.00e-125 | 377 |
| MsG0680031063.01.T01 | MTR_2g461670 | 43.796 | 411 | 222 | 5 | 148 | 554 | 185 | 590 | 3.00e-119 | 364 |
| MsG0680031063.01.T01 | MTR_2g006790 | 38.923 | 483 | 242 | 11 | 78 | 553 | 72 | 508 | 1.79e-110 | 339 |
| MsG0680031063.01.T01 | MTR_2g082650 | 41.262 | 412 | 220 | 8 | 162 | 553 | 1 | 410 | 2.02e-110 | 336 |
| MsG0680031063.01.T01 | MTR_2g082650 | 40.136 | 441 | 232 | 10 | 136 | 553 | 108 | 539 | 5.68e-110 | 339 |
| MsG0680031063.01.T01 | MTR_4g133570 | 39.547 | 397 | 213 | 7 | 178 | 552 | 70 | 461 | 1.16e-98 | 307 |
| MsG0680031063.01.T01 | MTR_7g012370 | 39.506 | 405 | 225 | 6 | 161 | 546 | 125 | 528 | 5.64e-96 | 303 |
| MsG0680031063.01.T01 | MTR_6g013840 | 39.903 | 411 | 227 | 6 | 161 | 552 | 120 | 529 | 1.56e-92 | 293 |
| MsG0680031063.01.T01 | MTR_7g096160 | 39.437 | 355 | 185 | 4 | 202 | 553 | 325 | 652 | 3.43e-86 | 280 |
| MsG0680031063.01.T01 | MTR_3g452360 | 38.360 | 378 | 207 | 10 | 192 | 551 | 8 | 377 | 7.24e-83 | 263 |
| MsG0680031063.01.T01 | MTR_3g452360 | 37.405 | 393 | 220 | 10 | 177 | 551 | 142 | 526 | 1.85e-82 | 267 |
| MsG0680031063.01.T01 | MTR_1g070490 | 40.413 | 339 | 170 | 6 | 202 | 535 | 268 | 579 | 1.65e-77 | 256 |
| MsG0680031063.01.T01 | MTR_7g012370 | 42.182 | 275 | 142 | 4 | 203 | 461 | 168 | 441 | 1.02e-66 | 224 |
| MsG0680031063.01.T01 | MTR_4g133942 | 48.500 | 200 | 73 | 3 | 357 | 553 | 160 | 332 | 3.64e-55 | 189 |
| MsG0680031063.01.T01 | MTR_7g074680 | 29.868 | 529 | 320 | 15 | 42 | 552 | 164 | 659 | 9.25e-53 | 191 |
| MsG0680031063.01.T01 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 258 | 602 | 1.02e-51 | 187 |
| MsG0680031063.01.T01 | MTR_7g074680 | 33.696 | 368 | 213 | 8 | 193 | 552 | 218 | 562 | 1.08e-51 | 186 |
| MsG0680031063.01.T01 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 278 | 622 | 1.28e-51 | 187 |
| MsG0680031063.01.T01 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 278 | 622 | 1.48e-51 | 187 |
| MsG0680031063.01.T01 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 298 | 642 | 2.55e-51 | 186 |
| MsG0680031063.01.T01 | MTR_4g118030 | 31.414 | 191 | 122 | 6 | 359 | 540 | 145 | 335 | 5.21e-23 | 100 |
| MsG0680031063.01.T01 | MTR_3g092310 | 30.526 | 190 | 124 | 5 | 359 | 540 | 140 | 329 | 1.04e-20 | 94.0 |
| MsG0680031063.01.T01 | MTR_7g094230 | 30.857 | 175 | 116 | 4 | 359 | 528 | 151 | 325 | 3.64e-20 | 92.4 |
| MsG0680031063.01.T01 | MTR_7g109210 | 30.814 | 172 | 114 | 4 | 359 | 525 | 159 | 330 | 6.85e-20 | 92.0 |
| MsG0680031063.01.T01 | MTR_6g008900 | 27.365 | 296 | 175 | 11 | 240 | 525 | 74 | 339 | 1.14e-19 | 91.3 |
| MsG0680031063.01.T01 | MTR_4g071620 | 27.365 | 296 | 175 | 11 | 240 | 525 | 74 | 339 | 1.14e-19 | 91.3 |
| MsG0680031063.01.T01 | MTR_5g036580 | 29.534 | 193 | 123 | 6 | 359 | 540 | 166 | 356 | 2.25e-18 | 87.8 |
| MsG0680031063.01.T01 | MTR_1g089820 | 29.474 | 190 | 126 | 5 | 359 | 540 | 154 | 343 | 1.65e-15 | 78.6 |
| MsG0680031063.01.T01 | MTR_1g021855 | 29.688 | 192 | 125 | 6 | 359 | 540 | 165 | 356 | 2.09e-15 | 78.6 |
| MsG0680031063.01.T01 | MTR_3g111600 | 27.225 | 191 | 130 | 5 | 359 | 540 | 80 | 270 | 6.06e-15 | 75.9 |
| MsG0680031063.01.T01 | MTR_8g078240 | 25.820 | 244 | 167 | 8 | 310 | 540 | 92 | 334 | 1.20e-13 | 72.8 |
| MsG0680031063.01.T01 | MTR_5g019220 | 28.272 | 191 | 128 | 6 | 359 | 540 | 166 | 356 | 1.13e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031063.01.T01 | AT3G02350 | 74.679 | 545 | 138 | 0 | 11 | 555 | 17 | 561 | 0.0 | 844 |
| MsG0680031063.01.T01 | AT3G25140 | 65.542 | 563 | 182 | 8 | 1 | 555 | 1 | 559 | 0.0 | 749 |
| MsG0680031063.01.T01 | AT3G61130 | 51.485 | 404 | 188 | 6 | 153 | 553 | 273 | 671 | 1.63e-150 | 447 |
| MsG0680031063.01.T01 | AT5G47780 | 48.387 | 403 | 203 | 3 | 153 | 554 | 217 | 615 | 5.16e-145 | 432 |
| MsG0680031063.01.T01 | AT4G38270 | 49.235 | 392 | 193 | 3 | 167 | 553 | 284 | 674 | 3.59e-141 | 424 |
| MsG0680031063.01.T01 | AT4G38270 | 49.235 | 392 | 193 | 3 | 167 | 553 | 288 | 678 | 4.59e-141 | 424 |
| MsG0680031063.01.T01 | AT1G18580 | 47.291 | 406 | 207 | 5 | 150 | 551 | 132 | 534 | 1.48e-132 | 397 |
| MsG0680031063.01.T01 | AT2G46480 | 46.305 | 406 | 215 | 3 | 148 | 551 | 132 | 536 | 4.32e-129 | 388 |
| MsG0680031063.01.T01 | AT2G46480 | 46.305 | 406 | 215 | 3 | 148 | 551 | 145 | 549 | 1.04e-128 | 387 |
| MsG0680031063.01.T01 | AT2G20810 | 42.708 | 480 | 250 | 8 | 80 | 553 | 75 | 535 | 4.51e-127 | 383 |
| MsG0680031063.01.T01 | AT2G46480 | 43.103 | 406 | 203 | 4 | 148 | 551 | 132 | 511 | 4.43e-114 | 348 |
| MsG0680031063.01.T01 | AT2G46480 | 43.103 | 406 | 203 | 4 | 148 | 551 | 145 | 524 | 8.54e-114 | 348 |
| MsG0680031063.01.T01 | AT5G54690 | 37.529 | 429 | 243 | 9 | 148 | 553 | 106 | 532 | 1.86e-102 | 319 |
| MsG0680031063.01.T01 | AT3G01040 | 39.198 | 449 | 238 | 10 | 137 | 552 | 83 | 529 | 2.69e-97 | 306 |
| MsG0680031063.01.T01 | AT3G01040 | 39.198 | 449 | 238 | 10 | 137 | 552 | 83 | 529 | 2.69e-97 | 306 |
| MsG0680031063.01.T01 | AT5G15470 | 39.344 | 427 | 234 | 8 | 149 | 552 | 105 | 529 | 1.86e-96 | 303 |
| MsG0680031063.01.T01 | AT1G06780 | 39.633 | 381 | 200 | 7 | 177 | 553 | 233 | 587 | 4.27e-89 | 286 |
| MsG0680031063.01.T01 | AT1G06780 | 39.633 | 381 | 200 | 7 | 177 | 553 | 246 | 600 | 6.71e-89 | 286 |
| MsG0680031063.01.T01 | AT2G30575 | 36.036 | 444 | 251 | 8 | 115 | 553 | 193 | 608 | 8.02e-88 | 283 |
| MsG0680031063.01.T01 | AT3G01040 | 37.162 | 444 | 221 | 11 | 137 | 552 | 83 | 496 | 3.15e-84 | 271 |
| MsG0680031063.01.T01 | AT3G58790 | 36.802 | 394 | 223 | 10 | 179 | 551 | 16 | 404 | 1.47e-79 | 256 |
| MsG0680031063.01.T01 | AT3G58790 | 34.676 | 447 | 252 | 12 | 139 | 551 | 96 | 536 | 6.62e-79 | 258 |
| MsG0680031063.01.T01 | AT2G38650 | 34.278 | 353 | 208 | 7 | 202 | 552 | 286 | 616 | 2.46e-55 | 197 |
| MsG0680031063.01.T01 | AT2G38650 | 34.278 | 353 | 208 | 7 | 202 | 552 | 286 | 616 | 2.46e-55 | 197 |
| MsG0680031063.01.T01 | AT2G38650 | 34.100 | 261 | 149 | 7 | 202 | 461 | 286 | 524 | 1.14e-31 | 129 |
| MsG0680031063.01.T01 | AT3G06260 | 28.421 | 190 | 128 | 4 | 359 | 540 | 150 | 339 | 1.51e-20 | 93.6 |
| MsG0680031063.01.T01 | AT4G02130 | 30.000 | 190 | 125 | 5 | 359 | 540 | 150 | 339 | 1.92e-19 | 90.5 |
| MsG0680031063.01.T01 | AT4G02130 | 30.000 | 190 | 125 | 5 | 359 | 540 | 150 | 339 | 1.92e-19 | 90.5 |
| MsG0680031063.01.T01 | AT4G02130 | 30.000 | 190 | 125 | 5 | 359 | 540 | 150 | 339 | 1.92e-19 | 90.5 |
| MsG0680031063.01.T01 | AT3G28340 | 31.638 | 177 | 114 | 5 | 357 | 526 | 153 | 329 | 5.23e-19 | 89.4 |
| MsG0680031063.01.T01 | AT3G62660 | 29.474 | 190 | 126 | 5 | 359 | 540 | 164 | 353 | 1.59e-18 | 87.8 |
| MsG0680031063.01.T01 | AT1G70090 | 29.319 | 191 | 126 | 6 | 359 | 540 | 169 | 359 | 3.60e-18 | 87.0 |
| MsG0680031063.01.T01 | AT1G70090 | 29.319 | 191 | 126 | 6 | 359 | 540 | 169 | 359 | 3.60e-18 | 87.0 |
| MsG0680031063.01.T01 | AT1G02720 | 29.714 | 175 | 118 | 4 | 359 | 528 | 165 | 339 | 7.45e-18 | 85.9 |
| MsG0680031063.01.T01 | AT1G02720 | 29.714 | 175 | 118 | 4 | 359 | 528 | 165 | 339 | 7.45e-18 | 85.9 |
| MsG0680031063.01.T01 | AT1G24170 | 25.000 | 312 | 193 | 11 | 240 | 540 | 81 | 362 | 4.65e-16 | 80.9 |
| MsG0680031063.01.T01 | AT1G19300 | 29.480 | 173 | 116 | 5 | 359 | 525 | 150 | 322 | 1.70e-15 | 78.6 |
| MsG0680031063.01.T01 | AT1G13250 | 28.421 | 190 | 128 | 4 | 359 | 540 | 144 | 333 | 6.35e-14 | 73.6 |
| MsG0680031063.01.T01 | AT3G50760 | 25.698 | 179 | 124 | 5 | 357 | 526 | 134 | 312 | 9.12e-11 | 63.9 |
Find 115 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAAGATATTACGCAATTT+AGG | 0.100856 | 6:-13606655 | None:intergenic |
| TGACTTTGTTGTTGAGTAAA+AGG | 0.213256 | 6:-13607654 | None:intergenic |
| ATTGCGTAATATCTTACTTT+TGG | 0.234871 | 6:+13606660 | MsG0680031063.01.T01:CDS |
| CAAGATCCAATGGCGGTTTC+TGG | 0.247730 | 6:+13604317 | None:intergenic |
| TTGAAGGTCTCCTTGATTAA+AGG | 0.276921 | 6:-13606814 | None:intergenic |
| GCAGTTTGAGAAAGAGATTA+AGG | 0.282255 | 6:+13605979 | MsG0680031063.01.T01:CDS |
| AAAGCATGCGCTTGGACTTA+TGG | 0.285134 | 6:+13606841 | MsG0680031063.01.T01:CDS |
| GTCCAACATCGACAGGTATT+TGG | 0.287876 | 6:-13606602 | None:intergenic |
| GTAAGATATTACGCAATTTA+GGG | 0.288691 | 6:-13606654 | None:intergenic |
| TTCGTGGATTCTTCTCTTAC+CGG | 0.307603 | 6:+13604366 | MsG0680031063.01.T01:CDS |
| TTTGTCCAGATGTGCAATTT+TGG | 0.312058 | 6:+13607848 | MsG0680031063.01.T01:CDS |
| CAAACTCTTGGGAACAGATT+TGG | 0.314101 | 6:-13606155 | None:intergenic |
| TAAGTCCAAGCGCATGCTTT+TGG | 0.343905 | 6:-13606838 | None:intergenic |
| GTTGAAGATGTTTGATGAAT+TGG | 0.345952 | 6:+13605868 | MsG0680031063.01.T01:CDS |
| GCACAGAACATTACCATTAC+TGG | 0.352779 | 6:+13606905 | MsG0680031063.01.T01:CDS |
| TCCCAAGAGTTTGCATTGCT+TGG | 0.362936 | 6:+13606165 | MsG0680031063.01.T01:CDS |
| GGTGCTGTAGAGATCTGTTT+TGG | 0.363904 | 6:+13606751 | MsG0680031063.01.T01:CDS |
| TCATGGCATGTACTCGGATT+AGG | 0.364109 | 6:+13607686 | MsG0680031063.01.T01:CDS |
| AGAACGAAGACCAGACAATA+TGG | 0.369537 | 6:+13607600 | MsG0680031063.01.T01:intron |
| CTTTCATCTCTATACTTCTC+CGG | 0.388330 | 6:-13606220 | None:intergenic |
| AGCTTAAGCTTGATATTTCT+AGG | 0.388924 | 6:+13605843 | MsG0680031063.01.T01:CDS |
| AGACCAGACAATATGGAAAT+CGG | 0.388975 | 6:+13607607 | MsG0680031063.01.T01:CDS |
| ATCTCATCCATGCTAATACT+TGG | 0.391177 | 6:-13607716 | None:intergenic |
| TAAATATGTCGACAGCGATA+TGG | 0.391317 | 6:+13607823 | MsG0680031063.01.T01:CDS |
| ATAAGCCAAAATTGCACATC+TGG | 0.401451 | 6:-13607853 | None:intergenic |
| GAGTCATCATTCTCAGTAGA+AGG | 0.408210 | 6:-13604455 | None:intergenic |
| AGGTTTGTGGAAGATTGATT+TGG | 0.416602 | 6:+13606714 | MsG0680031063.01.T01:CDS |
| AGCCAAGCAATGCAAACTCT+TGG | 0.417299 | 6:-13606167 | None:intergenic |
| TTGCTAAGGCAAAGAAGAAT+GGG | 0.430995 | 6:+13606110 | MsG0680031063.01.T01:CDS |
| TTTCTCTCATCCTTTAATCA+AGG | 0.433708 | 6:+13606804 | MsG0680031063.01.T01:CDS |
| TGAAAGTTTGGTTTAAAATG+AGG | 0.442153 | 6:+13606404 | MsG0680031063.01.T01:CDS |
| GACCAGACAATATGGAAATC+GGG | 0.448864 | 6:+13607608 | MsG0680031063.01.T01:CDS |
| TTACAGGATCTTCCTACTAC+TGG | 0.449291 | 6:+13605692 | MsG0680031063.01.T01:intron |
| CGCAATTTAGGGTACATCTC+TGG | 0.449642 | 6:-13606643 | None:intergenic |
| CATTGAAATCTGACCCACTT+AGG | 0.457831 | 6:+13605744 | MsG0680031063.01.T01:CDS |
| TCCCCGATTTCCATATTGTC+TGG | 0.459067 | 6:-13607610 | None:intergenic |
| CATTGAGAATCAAGGTGATA+AGG | 0.462472 | 6:+13606543 | MsG0680031063.01.T01:CDS |
| CTCAACACATCCTCATCAAT+CGG | 0.464839 | 6:-13605956 | None:intergenic |
| CTTGCTAAGGCAAAGAAGAA+TGG | 0.465967 | 6:+13606109 | MsG0680031063.01.T01:CDS |
| AATTCACGTACTGTGAATAT+CGG | 0.470054 | 6:-13606783 | None:intergenic |
| ATGTTGCTGCAATGAAAGTT+TGG | 0.471183 | 6:+13606392 | MsG0680031063.01.T01:CDS |
| CAAAGTCACTGGACAAATCA+TGG | 0.471586 | 6:+13607669 | MsG0680031063.01.T01:CDS |
| GTTTGCATTGCTTGGCTATG+AGG | 0.472066 | 6:+13606173 | MsG0680031063.01.T01:CDS |
| TTTAAAATGAGGCCGGTTGA+AGG | 0.483172 | 6:+13606415 | MsG0680031063.01.T01:CDS |
| AAATATGCACCTCCTTCAAC+CGG | 0.485582 | 6:-13606427 | None:intergenic |
| GCCAAGCAATGCAAACTCTT+GGG | 0.486260 | 6:-13606166 | None:intergenic |
| TTGCTTGGCTATGAGGCTGA+TGG | 0.491342 | 6:+13606180 | MsG0680031063.01.T01:CDS |
| CCAATGGCGGTTTCTGGTAG+AGG | 0.491768 | 6:+13604323 | None:intergenic |
| TATTTGATCTTGATGCTTGG+AGG | 0.492476 | 6:+13606872 | MsG0680031063.01.T01:CDS |
| TGATGATGTTGTTGTGCAAA+AGG | 0.498841 | 6:+13606684 | MsG0680031063.01.T01:CDS |
| ATATATTTGATCTTGATGCT+TGG | 0.500145 | 6:+13606869 | MsG0680031063.01.T01:CDS |
| TCAATCCAAAAGCATGCGCT+TGG | 0.501277 | 6:+13606833 | MsG0680031063.01.T01:CDS |
| ATTCTCAGTAGAAGGATTTG+TGG | 0.503088 | 6:-13604447 | None:intergenic |
| AGTATAGAGATGAAAGTCCT+AGG | 0.505593 | 6:+13606227 | MsG0680031063.01.T01:CDS |
| GATTTGGATGGGAAGGTGAA+TGG | 0.507230 | 6:+13606730 | MsG0680031063.01.T01:CDS |
| CTTAAATTCATCGTATGTAC+CGG | 0.512838 | 6:+13606480 | MsG0680031063.01.T01:CDS |
| TTTCATCTCTATACTTCTCC+GGG | 0.514817 | 6:-13606219 | None:intergenic |
| AAAAGGACTTGACAGGTTTG+TGG | 0.514967 | 6:+13606701 | MsG0680031063.01.T01:CDS |
| TTACTCAACAACAAAGTCAC+TGG | 0.515233 | 6:+13607658 | MsG0680031063.01.T01:CDS |
| CCTCTACCAGAAACCGCCAT+TGG | 0.516987 | 6:-13604323 | None:intergenic |
| AAATCCACTCTTGTCCTAAG+TGG | 0.522559 | 6:-13605758 | None:intergenic |
| TGCTTGGCTATGAGGCTGAT+GGG | 0.525319 | 6:+13606181 | MsG0680031063.01.T01:CDS |
| ACATATGCATTACCAGTAGT+AGG | 0.530737 | 6:-13605704 | None:intergenic |
| GGCAAAGAAGAATGGGGCAT+TGG | 0.532653 | 6:+13606117 | MsG0680031063.01.T01:CDS |
| TGTGGAAGATTGATTTGGAT+GGG | 0.537910 | 6:+13606719 | MsG0680031063.01.T01:CDS |
| GACAAATCATGGCATGTACT+CGG | 0.538880 | 6:+13607680 | MsG0680031063.01.T01:CDS |
| GCTGCTGTTATTCATTACAA+TGG | 0.540639 | 6:+13607746 | MsG0680031063.01.T01:CDS |
| GCGTCGTTGTTTGAGTCGGA+TGG | 0.542623 | 6:+13605932 | MsG0680031063.01.T01:CDS |
| TTGTGGAAGATTGATTTGGA+TGG | 0.543073 | 6:+13606718 | MsG0680031063.01.T01:CDS |
| TGTTAATGAGTCACTTGCTA+AGG | 0.546277 | 6:+13606096 | MsG0680031063.01.T01:CDS |
| CATCGTATGTACCGGTGTTG+AGG | 0.547247 | 6:+13606488 | MsG0680031063.01.T01:CDS |
| GAAGATAGTCCAACATCGAC+AGG | 0.549250 | 6:-13606609 | None:intergenic |
| CAGCATTACATTGAGAATCA+AGG | 0.549426 | 6:+13606535 | MsG0680031063.01.T01:CDS |
| TAGAGATGAAAGTCCTAGGC+CGG | 0.550345 | 6:+13606231 | MsG0680031063.01.T01:CDS |
| GGATCTTCAAACTCCGGCCT+AGG | 0.550398 | 6:-13606244 | None:intergenic |
| ACAATGGAAACATGAAACCT+TGG | 0.551889 | 6:+13607762 | MsG0680031063.01.T01:CDS |
| TGCCAAATACCTGTCGATGT+TGG | 0.563157 | 6:+13606600 | MsG0680031063.01.T01:CDS |
| GCCTCAACTCGCCTCAACAC+CGG | 0.563701 | 6:-13606499 | None:intergenic |
| GGGTGAGAAGATTTCGAACC+CGG | 0.565653 | 6:+13606201 | MsG0680031063.01.T01:CDS |
| AGGATAGAGTGAAGATTGCG+AGG | 0.565662 | 6:+13605999 | MsG0680031063.01.T01:CDS |
| TTCAAAGCAATATCTAGCCA+AGG | 0.567247 | 6:-13607779 | None:intergenic |
| GTACCTTGTTCTGCCAGTAA+TGG | 0.575805 | 6:-13606918 | None:intergenic |
| CAGAGCGTCGTTGTTTGAGT+CGG | 0.578709 | 6:+13605928 | MsG0680031063.01.T01:CDS |
| ATACAATCCAAGTATTAGCA+TGG | 0.580209 | 6:+13607709 | MsG0680031063.01.T01:CDS |
| ATGCTTATGCTGCATATGCT+AGG | 0.582801 | 6:+13605819 | MsG0680031063.01.T01:CDS |
| TCTGGTAGAGGAAGCAGAGG+TGG | 0.585835 | 6:+13604335 | MsG0680031063.01.T01:CDS |
| AGTTTGGTTTAAAATGAGGC+CGG | 0.588130 | 6:+13606408 | MsG0680031063.01.T01:CDS |
| TAAAGAATGCAGTTGAGCCA+TGG | 0.589043 | 6:+13606335 | MsG0680031063.01.T01:CDS |
| ACATAGCAGAGATAAAGATC+CGG | 0.591248 | 6:-13604385 | None:intergenic |
| TGCATATTTAGAGATAAAGT+CGG | 0.591938 | 6:+13606441 | MsG0680031063.01.T01:CDS |
| ACCGGTGTTGAGGCGAGTTG+AGG | 0.594062 | 6:+13606498 | MsG0680031063.01.T01:CDS |
| AAGATGTTTGATGAATTGGC+TGG | 0.598245 | 6:+13605872 | MsG0680031063.01.T01:CDS |
| CGTGATAGCTGTGTCGGTGG+TGG | 0.602400 | 6:+13606300 | MsG0680031063.01.T01:CDS |
| AATCCACTCTTGTCCTAAGT+GGG | 0.603135 | 6:-13605757 | None:intergenic |
| AGAGGTGGATCTACTCTTCG+TGG | 0.604744 | 6:+13604350 | MsG0680031063.01.T01:CDS |
| GTTGTGCAAAAGGACTTGAC+AGG | 0.620482 | 6:+13606694 | MsG0680031063.01.T01:CDS |
| AGACAACGTGATAGCTGTGT+CGG | 0.620965 | 6:+13606294 | MsG0680031063.01.T01:CDS |
| AACAACGACGCTCTGTACGT+CGG | 0.623627 | 6:-13605920 | None:intergenic |
| AAAATGAGGCCGGTTGAAGG+AGG | 0.624677 | 6:+13606418 | MsG0680031063.01.T01:CDS |
| GAAGATTGATTTGGATGGGA+AGG | 0.627613 | 6:+13606723 | MsG0680031063.01.T01:CDS |
| AAATCGGGGACACTTCCACC+TGG | 0.631114 | 6:+13607623 | MsG0680031063.01.T01:CDS |
| ACCAGACAATATGGAAATCG+GGG | 0.633868 | 6:+13607609 | MsG0680031063.01.T01:CDS |
| GAGTAAAAGGTAATCAAACC+AGG | 0.642054 | 6:-13607641 | None:intergenic |
| AAACTCGGATCTTCAAACTC+CGG | 0.646387 | 6:-13606250 | None:intergenic |
| TGACCCACTTAGGACAAGAG+TGG | 0.652138 | 6:+13605754 | MsG0680031063.01.T01:CDS |
| GTCGGTGGTGGTTAGATCTG+TGG | 0.652481 | 6:+13606312 | MsG0680031063.01.T01:CDS |
| TTACCATTACTGGCAGAACA+AGG | 0.668329 | 6:+13606915 | MsG0680031063.01.T01:CDS |
| TGCGAGGATGATGATTGTTG+AGG | 0.674761 | 6:+13606015 | MsG0680031063.01.T01:CDS |
| ATTGCATAATGATACAAACT+CGG | 0.677991 | 6:-13606265 | None:intergenic |
| CAACGTGATAGCTGTGTCGG+TGG | 0.680418 | 6:+13606297 | MsG0680031063.01.T01:CDS |
| GTTTCTGGTAGAGGAAGCAG+AGG | 0.683776 | 6:+13604332 | MsG0680031063.01.T01:CDS |
| TGCTAAGGCAAAGAAGAATG+GGG | 0.694950 | 6:+13606111 | MsG0680031063.01.T01:CDS |
| GTCGGATGGTCCGATTGATG+AGG | 0.696242 | 6:+13605946 | MsG0680031063.01.T01:CDS |
| TAAAAGGTAATCAAACCAGG+TGG | 0.699075 | 6:-13607638 | None:intergenic |
| CGATTGATGAGGATGTGTTG+AGG | 0.706532 | 6:+13605957 | MsG0680031063.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTATAAAAAATTACTAAAA+GGG | + | Chr6:13605100-13605119 | MsG0680031063.01.T01:intron | 10.0% |
| !! | TTCTATAAAAAATTACTAAA+AGG | + | Chr6:13605099-13605118 | MsG0680031063.01.T01:intron | 10.0% |
| !!! | AAAGTTAAATCTAAAATAAA+GGG | - | Chr6:13604566-13604585 | None:intergenic | 10.0% |
| !!! | TAAAGTTAAATCTAAAATAA+AGG | - | Chr6:13604567-13604586 | None:intergenic | 10.0% |
| !! | AATTCATGAAATTAACATAT+GGG | - | Chr6:13604597-13604616 | None:intergenic | 15.0% |
| !! | AGTTCATCAAATTAAAATAT+GGG | - | Chr6:13605244-13605263 | None:intergenic | 15.0% |
| !! | ATAAATTAAATGGAAAAAGA+TGG | + | Chr6:13607257-13607276 | MsG0680031063.01.T01:intron | 15.0% |
| !! | CAATATCCAAAATTTATAAT+AGG | - | Chr6:13604840-13604859 | None:intergenic | 15.0% |
| !! | CAATTTCCAAAATAAAAAAT+GGG | - | Chr6:13604536-13604555 | None:intergenic | 15.0% |
| !!! | AAAACTGAATCTAAAATAAA+GGG | - | Chr6:13604870-13604889 | None:intergenic | 15.0% |
| !!! | AAAACTGAATCTAAAATAAA+TGG | - | Chr6:13604870-13604889 | None:intergenic | 15.0% |
| !!! | ACAATAACTTTATAAACTTT+TGG | + | Chr6:13605180-13605199 | MsG0680031063.01.T01:intron | 15.0% |
| !!! | CTACTTTAAAATAACATATT+TGG | - | Chr6:13607159-13607178 | None:intergenic | 15.0% |
| !!! | CTATTATAAATTTTGGATAT+TGG | + | Chr6:13604838-13604857 | MsG0680031063.01.T01:intron | 15.0% |
| !!! | TAAAACTGAATCTAAAATAA+AGG | - | Chr6:13604871-13604890 | None:intergenic | 15.0% |
| !!! | TTCATTTTTTAAACTATTAC+TGG | - | Chr6:13605005-13605024 | None:intergenic | 15.0% |
| !!! | TTGAAACCTATTATAAATTT+TGG | + | Chr6:13604831-13604850 | MsG0680031063.01.T01:intron | 15.0% |
| !!! | TTTATTTTAGATTCAGTTTT+AGG | + | Chr6:13604870-13604889 | MsG0680031063.01.T01:intron | 15.0% |
| !! | CAAAATTTGATGAATTGAAT+TGG | - | Chr6:13604781-13604800 | None:intergenic | 20.0% |
| !! | CAATTCATGAAATTAACATA+TGG | - | Chr6:13604598-13604617 | None:intergenic | 20.0% |
| !! | CACACTGATAATAATAATTT+GGG | + | Chr6:13604709-13604728 | MsG0680031063.01.T01:intron | 20.0% |
| !! | CAGTTCATCAAATTAAAATA+TGG | - | Chr6:13605245-13605264 | None:intergenic | 20.0% |
| !! | CCAATTTCCAAAATAAAAAA+TGG | - | Chr6:13604537-13604556 | None:intergenic | 20.0% |
| !! | CCTTTGTACAATTATTAAAT+GGG | + | Chr6:13607531-13607550 | MsG0680031063.01.T01:intron | 20.0% |
| !! | GATTCAAGTCATAAATTAAA+TGG | + | Chr6:13607247-13607266 | MsG0680031063.01.T01:intron | 20.0% |
| !! | TAATTAATGAATCAATCTTG+TGG | + | Chr6:13604629-13604648 | MsG0680031063.01.T01:intron | 20.0% |
| !! | TCACACTGATAATAATAATT+TGG | + | Chr6:13604708-13604727 | MsG0680031063.01.T01:intron | 20.0% |
| !! | TCCTTTGTACAATTATTAAA+TGG | + | Chr6:13607530-13607549 | MsG0680031063.01.T01:intron | 20.0% |
| !! | TTTCGAAAAAGCTATTAAAA+CGG | - | Chr6:13607017-13607036 | None:intergenic | 20.0% |
| !!! | CCATTTTTTATTTTGGAAAT+TGG | + | Chr6:13604534-13604553 | MsG0680031063.01.T01:intron | 20.0% |
| !!! | GTTGTAAAGTTTGATTTTTA+TGG | + | Chr6:13604507-13604526 | MsG0680031063.01.T01:intron | 20.0% |
| !!! | TCATTTTCTCAAATTATTAC+CGG | - | Chr6:13605566-13605585 | None:intergenic | 20.0% |
| !!! | TCATTTTCTGAAATTATTAC+CGG | - | Chr6:13605329-13605348 | None:intergenic | 20.0% |
| !!! | TTGAATCTTGAATTATTTTG+AGG | - | Chr6:13607234-13607253 | None:intergenic | 20.0% |
| !!! | TTTTAATATATTTTCCTGCA+TGG | + | Chr6:13607047-13607066 | MsG0680031063.01.T01:intron | 20.0% |
| ! | AAGTTATAATAACTACAAGC+AGG | - | Chr6:13606950-13606969 | None:intergenic | 25.0% |
| ! | AATTAGTGAATTCCACTTTA+CGG | - | Chr6:13607560-13607579 | None:intergenic | 25.0% |
| ! | AGTAAGATATTACGCAATTT+AGG | - | Chr6:13606658-13606677 | None:intergenic | 25.0% |
| ! | ATAAACATAATCACATGTGT+TGG | + | Chr6:13605354-13605373 | MsG0680031063.01.T01:intron | 25.0% |
| ! | ATAAGATTCAATTCACGATT+TGG | - | Chr6:13607115-13607134 | None:intergenic | 25.0% |
| ! | ATATATTTGATCTTGATGCT+TGG | + | Chr6:13606869-13606888 | MsG0680031063.01.T01:CDS | 25.0% |
| ! | ATTGCATAATGATACAAACT+CGG | - | Chr6:13606268-13606287 | None:intergenic | 25.0% |
| ! | CAATGCATGAAATTAACATA+TGG | - | Chr6:13604902-13604921 | None:intergenic | 25.0% |
| ! | CCCATTTAATAATTGTACAA+AGG | - | Chr6:13607534-13607553 | None:intergenic | 25.0% |
| ! | CTATATAAGATTGCCAAAAA+AGG | + | Chr6:13607284-13607303 | MsG0680031063.01.T01:intron | 25.0% |
| ! | GAGTTTCATCACAATAAATT+GGG | + | Chr6:13607372-13607391 | MsG0680031063.01.T01:intron | 25.0% |
| ! | GTAAGATATTACGCAATTTA+GGG | - | Chr6:13606657-13606676 | None:intergenic | 25.0% |
| ! | GTATCGAATAGAAATACAAT+TGG | + | Chr6:13607447-13607466 | MsG0680031063.01.T01:intron | 25.0% |
| ! | GTTAAAAATTCAGAAGTTGA+AGG | + | Chr6:13606060-13606079 | MsG0680031063.01.T01:CDS | 25.0% |
| ! | GTTTACCAGTACAAAATTAT+TGG | - | Chr6:13606995-13607014 | None:intergenic | 25.0% |
| ! | TGAATCAATACAAAAATCTC+TGG | + | Chr6:13607798-13607817 | MsG0680031063.01.T01:CDS | 25.0% |
| ! | TGAATGATTTGAACATAATC+TGG | + | Chr6:13605021-13605040 | MsG0680031063.01.T01:intron | 25.0% |
| ! | TGAGTTTCATCACAATAAAT+TGG | + | Chr6:13607371-13607390 | MsG0680031063.01.T01:intron | 25.0% |
| ! | TGCATATTTAGAGATAAAGT+CGG | + | Chr6:13606441-13606460 | MsG0680031063.01.T01:CDS | 25.0% |
| ! | TTGAATGTAATCATATGTGT+AGG | + | Chr6:13604748-13604767 | MsG0680031063.01.T01:intron | 25.0% |
| !! | ATATGTGCATAGAACATTTT+TGG | + | Chr6:13605484-13605503 | MsG0680031063.01.T01:intron | 25.0% |
| !! | ATTGCGTAATATCTTACTTT+TGG | + | Chr6:13606660-13606679 | MsG0680031063.01.T01:CDS | 25.0% |
| !! | CATTTTCTCAAATTATTACC+GGG | - | Chr6:13605565-13605584 | None:intergenic | 25.0% |
| !! | TATTGTAACTTGTAAGATAC+TGG | + | Chr6:13607474-13607493 | MsG0680031063.01.T01:intron | 25.0% |
| !! | TGAAAGTTTGGTTTAAAATG+AGG | + | Chr6:13606404-13606423 | MsG0680031063.01.T01:CDS | 25.0% |
| !! | TGTAGAGATTCATATTGATT+AGG | + | Chr6:13607415-13607434 | MsG0680031063.01.T01:intron | 25.0% |
| !!! | AGGTTTTTGTTTTTGTTTAC+AGG | + | Chr6:13605676-13605695 | MsG0680031063.01.T01:intron | 25.0% |
| !!! | ATATTTGGTAATGTAGCTTA+CGG | - | Chr6:13607144-13607163 | None:intergenic | 25.0% |
| !!! | TGCATAGAACATTTTTGTTT+TGG | + | Chr6:13605489-13605508 | MsG0680031063.01.T01:intron | 25.0% |
| !!! | TGGAAACCCATTTTTTATTT+TGG | + | Chr6:13604527-13604546 | MsG0680031063.01.T01:intron | 25.0% |
| AATTCACGTACTGTGAATAT+CGG | - | Chr6:13606786-13606805 | None:intergenic | 30.0% | |
| ACAAAATCACACAAAAACAG+AGG | - | Chr6:13604489-13604508 | None:intergenic | 30.0% | |
| AGCTTAAGCTTGATATTTCT+AGG | + | Chr6:13605843-13605862 | MsG0680031063.01.T01:CDS | 30.0% | |
| ATACAATCCAAGTATTAGCA+TGG | + | Chr6:13607709-13607728 | MsG0680031063.01.T01:CDS | 30.0% | |
| CAGATTCAAATCATAATCAG+TGG | + | Chr6:13607080-13607099 | MsG0680031063.01.T01:intron | 30.0% | |
| CTTAAATTCATCGTATGTAC+CGG | + | Chr6:13606480-13606499 | MsG0680031063.01.T01:CDS | 30.0% | |
| GTTGAAGATGTTTGATGAAT+TGG | + | Chr6:13605868-13605887 | MsG0680031063.01.T01:CDS | 30.0% | |
| TAGGCAGTAATTCATTAGAA+AGG | + | Chr6:13607326-13607345 | MsG0680031063.01.T01:intron | 30.0% | |
| TGATTTGAACATAATCTGGT+TGG | + | Chr6:13605025-13605044 | MsG0680031063.01.T01:intron | 30.0% | |
| TTGAACATAATCACATGTGT+TGG | + | Chr6:13605591-13605610 | MsG0680031063.01.T01:intron | 30.0% | |
| TTTCTCTCATCCTTTAATCA+AGG | + | Chr6:13606804-13606823 | MsG0680031063.01.T01:CDS | 30.0% | |
| ! | CACTGATTATGATTTGAATC+TGG | - | Chr6:13607082-13607101 | None:intergenic | 30.0% |
| ! | TGAATTGGCTGGTAATTTTT+CGG | + | Chr6:13605883-13605902 | MsG0680031063.01.T01:CDS | 30.0% |
| ! | TTGTGCCAATAATTTTGTAC+TGG | + | Chr6:13606987-13607006 | MsG0680031063.01.T01:intron | 30.0% |
| ! | TTTTTCATGTCGTTACAAAC+AGG | + | Chr6:13606365-13606384 | MsG0680031063.01.T01:CDS | 30.0% |
| !! | TGACTTTGTTGTTGAGTAAA+AGG | - | Chr6:13607657-13607676 | None:intergenic | 30.0% |
| AAGATGTTTGATGAATTGGC+TGG | + | Chr6:13605872-13605891 | MsG0680031063.01.T01:CDS | 35.0% | |
| ACAATGGAAACATGAAACCT+TGG | + | Chr6:13607762-13607781 | MsG0680031063.01.T01:CDS | 35.0% | |
| ACATAGCAGAGATAAAGATC+CGG | - | Chr6:13604388-13604407 | None:intergenic | 35.0% | |
| ACATATGCATTACCAGTAGT+AGG | - | Chr6:13605707-13605726 | None:intergenic | 35.0% | |
| ACATGAAAAACATGCTTCCA+TGG | - | Chr6:13606355-13606374 | None:intergenic | 35.0% | |
| AGACCAGACAATATGGAAAT+CGG | + | Chr6:13607607-13607626 | MsG0680031063.01.T01:CDS | 35.0% | |
| AGGTTTGTGGAAGATTGATT+TGG | + | Chr6:13606714-13606733 | MsG0680031063.01.T01:CDS | 35.0% | |
| AGTATAGAGATGAAAGTCCT+AGG | + | Chr6:13606227-13606246 | MsG0680031063.01.T01:CDS | 35.0% | |
| ATAAGCCAAAATTGCACATC+TGG | - | Chr6:13607856-13607875 | None:intergenic | 35.0% | |
| ATCTCATCCATGCTAATACT+TGG | - | Chr6:13607719-13607738 | None:intergenic | 35.0% | |
| ATGTTGCTGCAATGAAAGTT+TGG | + | Chr6:13606392-13606411 | MsG0680031063.01.T01:CDS | 35.0% | |
| ATTCTCAGTAGAAGGATTTG+TGG | - | Chr6:13604450-13604469 | None:intergenic | 35.0% | |
| CAGCATTACATTGAGAATCA+AGG | + | Chr6:13606535-13606554 | MsG0680031063.01.T01:CDS | 35.0% | |
| CATTGAGAATCAAGGTGATA+AGG | + | Chr6:13606543-13606562 | MsG0680031063.01.T01:CDS | 35.0% | |
| CTTTCATCTCTATACTTCTC+CGG | - | Chr6:13606223-13606242 | None:intergenic | 35.0% | |
| GAGTAAAAGGTAATCAAACC+AGG | - | Chr6:13607644-13607663 | None:intergenic | 35.0% | |
| GATCATTATTCACGAAACCA+TGG | - | Chr6:13607503-13607522 | None:intergenic | 35.0% | |
| GATGAACTGAATGAATCTTG+TGG | + | Chr6:13605256-13605275 | MsG0680031063.01.T01:intron | 35.0% | |
| GCAGTTTGAGAAAGAGATTA+AGG | + | Chr6:13605979-13605998 | MsG0680031063.01.T01:CDS | 35.0% | |
| GCTGCTGTTATTCATTACAA+TGG | + | Chr6:13607746-13607765 | MsG0680031063.01.T01:CDS | 35.0% | |
| TAAAAGGTAATCAAACCAGG+TGG | - | Chr6:13607641-13607660 | None:intergenic | 35.0% | |
| TAAATATGTCGACAGCGATA+TGG | + | Chr6:13607823-13607842 | MsG0680031063.01.T01:CDS | 35.0% | |
| TATTTGATCTTGATGCTTGG+AGG | + | Chr6:13606872-13606891 | MsG0680031063.01.T01:CDS | 35.0% | |
| TGTCTGTGTTAGTGTTTCAT+AGG | - | Chr6:13605287-13605306 | None:intergenic | 35.0% | |
| TGTTTGACTACACTGAGTTT+AGG | + | Chr6:13607307-13607326 | MsG0680031063.01.T01:intron | 35.0% | |
| TTACTCAACAACAAAGTCAC+TGG | + | Chr6:13607658-13607677 | MsG0680031063.01.T01:CDS | 35.0% | |
| TTACTTGATCTTCCTACTAC+TGG | + | Chr6:13605455-13605474 | MsG0680031063.01.T01:intron | 35.0% | |
| TTATCCGCATGCTTAGAAAA+AGG | + | Chr6:13605519-13605538 | MsG0680031063.01.T01:intron | 35.0% | |
| TTCAAAGCAATATCTAGCCA+AGG | - | Chr6:13607782-13607801 | None:intergenic | 35.0% | |
| TTGAAGGTCTCCTTGATTAA+AGG | - | Chr6:13606817-13606836 | None:intergenic | 35.0% | |
| TTGCTAAGGCAAAGAAGAAT+GGG | + | Chr6:13606110-13606129 | MsG0680031063.01.T01:CDS | 35.0% | |
| TTTCATCTCTATACTTCTCC+GGG | - | Chr6:13606222-13606241 | None:intergenic | 35.0% | |
| ! | AGTTTGGTTTAAAATGAGGC+CGG | + | Chr6:13606408-13606427 | MsG0680031063.01.T01:CDS | 35.0% |
| ! | ATAATCACATGTGTTGGTGT+TGG | + | Chr6:13605360-13605379 | MsG0680031063.01.T01:intron | 35.0% |
| ! | ATCACCTTTTTCTAAGCATG+CGG | - | Chr6:13605526-13605545 | None:intergenic | 35.0% |
| ! | CAATTCACGATTTGGAAAAC+TGG | - | Chr6:13607107-13607126 | None:intergenic | 35.0% |
| ! | TATAGAGGGCGTAACAAATT+AGG | + | Chr6:13605425-13605444 | MsG0680031063.01.T01:intron | 35.0% |
| ! | TGATGATGTTGTTGTGCAAA+AGG | + | Chr6:13606684-13606703 | MsG0680031063.01.T01:CDS | 35.0% |
| ! | TGTTAATGAGTCACTTGCTA+AGG | + | Chr6:13606096-13606115 | MsG0680031063.01.T01:CDS | 35.0% |
| ! | TTTGTCCAGATGTGCAATTT+TGG | + | Chr6:13607848-13607867 | MsG0680031063.01.T01:CDS | 35.0% |
| !! | AAGAAGTACTGACATAGACA+CGG | + | Chr6:13604956-13604975 | MsG0680031063.01.T01:intron | 35.0% |
| !! | TGTGGAAGATTGATTTGGAT+GGG | + | Chr6:13606719-13606738 | MsG0680031063.01.T01:CDS | 35.0% |
| !! | TTGACACACCTTTTGATTAG+AGG | + | Chr6:13605624-13605643 | MsG0680031063.01.T01:intron | 35.0% |
| !! | TTGTGGAAGATTGATTTGGA+TGG | + | Chr6:13606718-13606737 | MsG0680031063.01.T01:CDS | 35.0% |
| !!! | GTGTAGTCAAACACCTTTTT+TGG | - | Chr6:13607300-13607319 | None:intergenic | 35.0% |
| AAAAGGACTTGACAGGTTTG+TGG | + | Chr6:13606701-13606720 | MsG0680031063.01.T01:CDS | 40.0% | |
| AAACTCGGATCTTCAAACTC+CGG | - | Chr6:13606253-13606272 | None:intergenic | 40.0% | |
| AAATATGCACCTCCTTCAAC+CGG | - | Chr6:13606430-13606449 | None:intergenic | 40.0% | |
| AAATCCACTCTTGTCCTAAG+TGG | - | Chr6:13605761-13605780 | None:intergenic | 40.0% | |
| AACATAATCTGGTTGGACAC+AGG | + | Chr6:13605032-13605051 | MsG0680031063.01.T01:intron | 40.0% | |
| AATCCACTCTTGTCCTAAGT+GGG | - | Chr6:13605760-13605779 | None:intergenic | 40.0% | |
| ACATATGCACTACCAGTAGT+AGG | - | Chr6:13605470-13605489 | None:intergenic | 40.0% | |
| ACCAGACAATATGGAAATCG+GGG | + | Chr6:13607609-13607628 | MsG0680031063.01.T01:CDS | 40.0% | |
| AGAACGAAGACCAGACAATA+TGG | + | Chr6:13607600-13607619 | MsG0680031063.01.T01:intron | 40.0% | |
| AGAGTTGTCAGTGCTATAGA+GGG | + | Chr6:13605411-13605430 | MsG0680031063.01.T01:intron | 40.0% | |
| ATGCTTATGCTGCATATGCT+AGG | + | Chr6:13605819-13605838 | MsG0680031063.01.T01:CDS | 40.0% | |
| ATTGTTACTGACACAGATCC+CGG | + | Chr6:13605544-13605563 | MsG0680031063.01.T01:intron | 40.0% | |
| CAAACTCTTGGGAACAGATT+TGG | - | Chr6:13606158-13606177 | None:intergenic | 40.0% | |
| CAAAGTCACTGGACAAATCA+TGG | + | Chr6:13607669-13607688 | MsG0680031063.01.T01:CDS | 40.0% | |
| CATTGAAATCTGACCCACTT+AGG | + | Chr6:13605744-13605763 | MsG0680031063.01.T01:CDS | 40.0% | |
| CTCAACACATCCTCATCAAT+CGG | - | Chr6:13605959-13605978 | None:intergenic | 40.0% | |
| CTTGCTAAGGCAAAGAAGAA+TGG | + | Chr6:13606109-13606128 | MsG0680031063.01.T01:CDS | 40.0% | |
| GAATGAGTGAACGAATCTTG+TGG | + | Chr6:13604925-13604944 | MsG0680031063.01.T01:intron | 40.0% | |
| GACAAATCATGGCATGTACT+CGG | + | Chr6:13607680-13607699 | MsG0680031063.01.T01:CDS | 40.0% | |
| GACAACTCTAATCAAAGGTG+TGG | - | Chr6:13605400-13605419 | None:intergenic | 40.0% | |
| GACCAGACAATATGGAAATC+GGG | + | Chr6:13607608-13607627 | MsG0680031063.01.T01:CDS | 40.0% | |
| GAGTCATCATTCTCAGTAGA+AGG | - | Chr6:13604458-13604477 | None:intergenic | 40.0% | |
| GCACAGAACATTACCATTAC+TGG | + | Chr6:13606905-13606924 | MsG0680031063.01.T01:CDS | 40.0% | |
| TAAAGAATGCAGTTGAGCCA+TGG | + | Chr6:13606335-13606354 | MsG0680031063.01.T01:CDS | 40.0% | |
| TACCGACACCTCTAATCAAA+AGG | - | Chr6:13605635-13605654 | None:intergenic | 40.0% | |
| TACGGAGTGTGTAACGAATT+AGG | + | Chr6:13605656-13605675 | MsG0680031063.01.T01:intron | 40.0% | |
| TAGAGTTGTCAGTGCTATAG+AGG | + | Chr6:13605410-13605429 | MsG0680031063.01.T01:intron | 40.0% | |
| TGCTAAGGCAAAGAAGAATG+GGG | + | Chr6:13606111-13606130 | MsG0680031063.01.T01:CDS | 40.0% | |
| TTAAATGGGTCACCGTAAAG+TGG | + | Chr6:13607545-13607564 | MsG0680031063.01.T01:intron | 40.0% | |
| TTACAGGATCTTCCTACTAC+TGG | + | Chr6:13605692-13605711 | MsG0680031063.01.T01:intron | 40.0% | |
| TTACCATTACTGGCAGAACA+AGG | + | Chr6:13606915-13606934 | MsG0680031063.01.T01:CDS | 40.0% | |
| TTCGTGGATTCTTCTCTTAC+CGG | + | Chr6:13604366-13604385 | MsG0680031063.01.T01:CDS | 40.0% | |
| TTGTAAGATACTGGTGACCA+TGG | + | Chr6:13607483-13607502 | MsG0680031063.01.T01:intron | 40.0% | |
| ! | ATCAGAGGGTGTAAGGAATT+AGG | + | Chr6:13605075-13605094 | MsG0680031063.01.T01:intron | 40.0% |
| ! | GCACTGACAACTCTAATCAA+AGG | - | Chr6:13605405-13605424 | None:intergenic | 40.0% |
| ! | TGTTTGTGTCGATGCTTCAT+AGG | - | Chr6:13604660-13604679 | None:intergenic | 40.0% |
| ! | TTTAAAATGAGGCCGGTTGA+AGG | + | Chr6:13606415-13606434 | MsG0680031063.01.T01:CDS | 40.0% |
| !! | CACCTTTTGATTAGAGGTGT+CGG | + | Chr6:13605630-13605649 | MsG0680031063.01.T01:intron | 40.0% |
| !! | GAAGATTGATTTGGATGGGA+AGG | + | Chr6:13606723-13606742 | MsG0680031063.01.T01:CDS | 40.0% |
| AAAGCATGCGCTTGGACTTA+TGG | + | Chr6:13606841-13606860 | MsG0680031063.01.T01:CDS | 45.0% | |
| AGACAACGTGATAGCTGTGT+CGG | + | Chr6:13606294-13606313 | MsG0680031063.01.T01:CDS | 45.0% | |
| AGCCAAGCAATGCAAACTCT+TGG | - | Chr6:13606170-13606189 | None:intergenic | 45.0% | |
| AGGATAGAGTGAAGATTGCG+AGG | + | Chr6:13605999-13606018 | MsG0680031063.01.T01:CDS | 45.0% | |
| CATCGACACAAACACTGGAT+AGG | + | Chr6:13604666-13604685 | MsG0680031063.01.T01:intron | 45.0% | |
| CGATTGATGAGGATGTGTTG+AGG | + | Chr6:13605957-13605976 | MsG0680031063.01.T01:CDS | 45.0% | |
| GAAGATAGTCCAACATCGAC+AGG | - | Chr6:13606612-13606631 | None:intergenic | 45.0% | |
| GATTTGGATGGGAAGGTGAA+TGG | + | Chr6:13606730-13606749 | MsG0680031063.01.T01:CDS | 45.0% | |
| GCCAAGCAATGCAAACTCTT+GGG | - | Chr6:13606169-13606188 | None:intergenic | 45.0% | |
| GTACCTTGTTCTGCCAGTAA+TGG | - | Chr6:13606921-13606940 | None:intergenic | 45.0% | |
| GTCCAACATCGACAGGTATT+TGG | - | Chr6:13606605-13606624 | None:intergenic | 45.0% | |
| GTTGTGCAAAAGGACTTGAC+AGG | + | Chr6:13606694-13606713 | MsG0680031063.01.T01:CDS | 45.0% | |
| GTTTGCATTGCTTGGCTATG+AGG | + | Chr6:13606173-13606192 | MsG0680031063.01.T01:CDS | 45.0% | |
| TAGAGATGAAAGTCCTAGGC+CGG | + | Chr6:13606231-13606250 | MsG0680031063.01.T01:CDS | 45.0% | |
| TCATGGCATGTACTCGGATT+AGG | + | Chr6:13607686-13607705 | MsG0680031063.01.T01:CDS | 45.0% | |
| TCCCAAGAGTTTGCATTGCT+TGG | + | Chr6:13606165-13606184 | MsG0680031063.01.T01:CDS | 45.0% | |
| TCCCCGATTTCCATATTGTC+TGG | - | Chr6:13607613-13607632 | None:intergenic | 45.0% | |
| TCTGGATTCGATAACCATGC+AGG | - | Chr6:13607064-13607083 | None:intergenic | 45.0% | |
| TGCCAAATACCTGTCGATGT+TGG | + | Chr6:13606600-13606619 | MsG0680031063.01.T01:CDS | 45.0% | |
| TGCGAGGATGATGATTGTTG+AGG | + | Chr6:13606015-13606034 | MsG0680031063.01.T01:CDS | 45.0% | |
| ! | AGCGCATGCTTTTGGATTGA+AGG | - | Chr6:13606833-13606852 | None:intergenic | 45.0% |
| ! | CGCAATTTAGGGTACATCTC+TGG | - | Chr6:13606646-13606665 | None:intergenic | 45.0% |
| ! | CTAATCAAAGGTGTGGCAAC+TGG | - | Chr6:13605393-13605412 | None:intergenic | 45.0% |
| ! | TAAGTCCAAGCGCATGCTTT+TGG | - | Chr6:13606841-13606860 | None:intergenic | 45.0% |
| ! | TCAATCCAAAAGCATGCGCT+TGG | + | Chr6:13606833-13606852 | MsG0680031063.01.T01:CDS | 45.0% |
| !! | GATTAGAGGTGTCGGTACTA+CGG | + | Chr6:13605638-13605657 | MsG0680031063.01.T01:intron | 45.0% |
| !! | GGTGCTGTAGAGATCTGTTT+TGG | + | Chr6:13606751-13606770 | MsG0680031063.01.T01:CDS | 45.0% |
| !! | TGAAGCATCGACACAAACAC+TGG | + | Chr6:13604661-13604680 | MsG0680031063.01.T01:intron | 45.0% |
| !! | AAAATATATTAAAAAGAAAA+TGG | - | Chr6:13607041-13607060 | None:intergenic | 5.0% |
| AAAATGAGGCCGGTTGAAGG+AGG | + | Chr6:13606418-13606437 | MsG0680031063.01.T01:CDS | 50.0% | |
| AACAACGACGCTCTGTACGT+CGG | - | Chr6:13605923-13605942 | None:intergenic | 50.0% | |
| AGAGGTGGATCTACTCTTCG+TGG | + | Chr6:13604350-13604369 | MsG0680031063.01.T01:CDS | 50.0% | |
| CGACACTGACACATGAACAC+CGG | + | Chr6:13605307-13605326 | MsG0680031063.01.T01:intron | 50.0% | |
| GGCAAAGAAGAATGGGGCAT+TGG | + | Chr6:13606117-13606136 | MsG0680031063.01.T01:CDS | 50.0% | |
| GGGTGAGAAGATTTCGAACC+CGG | + | Chr6:13606201-13606220 | MsG0680031063.01.T01:CDS | 50.0% | |
| TCCTTACACCCTCTGATGCA+CGG | - | Chr6:13605072-13605091 | None:intergenic | 50.0% | |
| TGACCCACTTAGGACAAGAG+TGG | + | Chr6:13605754-13605773 | MsG0680031063.01.T01:CDS | 50.0% | |
| TGCTTGGCTATGAGGCTGAT+GGG | + | Chr6:13606181-13606200 | MsG0680031063.01.T01:CDS | 50.0% | |
| TTGCTTGGCTATGAGGCTGA+TGG | + | Chr6:13606180-13606199 | MsG0680031063.01.T01:CDS | 50.0% | |
| ! | CATCGTATGTACCGGTGTTG+AGG | + | Chr6:13606488-13606507 | MsG0680031063.01.T01:CDS | 50.0% |
| !! | CAGAGCGTCGTTGTTTGAGT+CGG | + | Chr6:13605928-13605947 | MsG0680031063.01.T01:CDS | 50.0% |
| !! | GTTTCTGGTAGAGGAAGCAG+AGG | + | Chr6:13604332-13604351 | MsG0680031063.01.T01:CDS | 50.0% |
| AAATCGGGGACACTTCCACC+TGG | + | Chr6:13607623-13607642 | MsG0680031063.01.T01:CDS | 55.0% | |
| CAACGTGATAGCTGTGTCGG+TGG | + | Chr6:13606297-13606316 | MsG0680031063.01.T01:CDS | 55.0% | |
| GCGTCGTTGTTTGAGTCGGA+TGG | + | Chr6:13605932-13605951 | MsG0680031063.01.T01:CDS | 55.0% | |
| GGATCTTCAAACTCCGGCCT+AGG | - | Chr6:13606247-13606266 | None:intergenic | 55.0% | |
| GTCGGATGGTCCGATTGATG+AGG | + | Chr6:13605946-13605965 | MsG0680031063.01.T01:CDS | 55.0% | |
| GTTGGACACAGGACACACCA+AGG | + | Chr6:13605043-13605062 | MsG0680031063.01.T01:intron | 55.0% | |
| TCTGGTAGAGGAAGCAGAGG+TGG | + | Chr6:13604335-13604354 | MsG0680031063.01.T01:CDS | 55.0% | |
| ! | CAAGGTGTCCGTGCATCAGA+GGG | + | Chr6:13605061-13605080 | MsG0680031063.01.T01:intron | 55.0% |
| ! | GTCGGTGGTGGTTAGATCTG+TGG | + | Chr6:13606312-13606331 | MsG0680031063.01.T01:CDS | 55.0% |
| ! | TCAAAGGTGTGGCAACTGGC+AGG | - | Chr6:13605389-13605408 | None:intergenic | 55.0% |
| ! | TCCGTGCATCAGAGGGTGTA+AGG | + | Chr6:13605068-13605087 | MsG0680031063.01.T01:intron | 55.0% |
| CCTCTGATGCACGGACACCT+TGG | - | Chr6:13605063-13605082 | None:intergenic | 60.0% | |
| GCCTCAACTCGCCTCAACAC+CGG | - | Chr6:13606502-13606521 | None:intergenic | 60.0% | |
| ! | ACCGGTGTTGAGGCGAGTTG+AGG | + | Chr6:13606498-13606517 | MsG0680031063.01.T01:CDS | 60.0% |
| ! | CCAAGGTGTCCGTGCATCAG+AGG | + | Chr6:13605060-13605079 | MsG0680031063.01.T01:intron | 60.0% |
| ! | CGTGATAGCTGTGTCGGTGG+TGG | + | Chr6:13606300-13606319 | MsG0680031063.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 13604326 | 13607877 | 13604326 | ID=MsG0680031063.01;Name=MsG0680031063.01 |
| Chr6 | mRNA | 13604326 | 13607877 | 13604326 | ID=MsG0680031063.01.T01;Parent=MsG0680031063.01;Name=MsG0680031063.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|3|0|555 |
| Chr6 | exon | 13604326 | 13604478 | 13604326 | ID=MsG0680031063.01.T01:exon:9532;Parent=MsG0680031063.01.T01 |
| Chr6 | exon | 13605698 | 13606936 | 13605698 | ID=MsG0680031063.01.T01:exon:9533;Parent=MsG0680031063.01.T01 |
| Chr6 | exon | 13607602 | 13607877 | 13607602 | ID=MsG0680031063.01.T01:exon:9534;Parent=MsG0680031063.01.T01 |
| Chr6 | CDS | 13604326 | 13604478 | 13604326 | ID=MsG0680031063.01.T01:cds;Parent=MsG0680031063.01.T01 |
| Chr6 | CDS | 13605698 | 13606936 | 13605698 | ID=MsG0680031063.01.T01:cds;Parent=MsG0680031063.01.T01 |
| Chr6 | CDS | 13607602 | 13607877 | 13607602 | ID=MsG0680031063.01.T01:cds;Parent=MsG0680031063.01.T01 |
| Gene Sequence |
| Protein sequence |
