AlfalfaGEDB | MsG0180003483.01

M. sativa cultivar ZhongmuNo.1 / MsG0180003483.01

KEGG: K01674
GO: -
PFAM: PF00194

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003483.01.T01	XP_013468119.1	81.928	166	14	1	1	166	1	150	5.98E-92	279

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003483.01.T01	Q8L817	52.101	119	56	1	48	166	34	151	1.53E-38	135

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003483.01.T01	A0A072VKK0	81.928	166	14	1	1	166	1	150	2.86e-92	279

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048633.01	MsG0180003483.01	0.825710	4.041281e-54	3.712231e-51
MsG0080048652.01	MsG0180003483.01	0.853016	3.156872e-61	6.724218e-58
MsG0180001108.01	MsG0180003483.01	0.836423	9.439881e-57	1.189118e-53
MsG0180002808.01	MsG0180003483.01	0.818529	1.869504e-52	1.402943e-49
MsG0180003375.01	MsG0180003483.01	0.809154	2.177378e-50	1.268770e-47
MsG0180003482.01	MsG0180003483.01	0.911763	4.205356e-83	9.153513e-79
MsG0180003483.01	MsG0180005757.01	0.814790	1.287893e-51	8.723992e-49
MsG0180003483.01	MsG0280007686.01	0.800285	1.548586e-48	7.182845e-46
MsG0180003483.01	MsG0280007759.01	0.819937	8.935139e-53	6.972422e-50
MsG0180003483.01	MsG0280007760.01	0.804632	1.968146e-49	1.019838e-46
MsG0180003483.01	MsG0280008226.01	0.800931	1.143251e-48	5.390499e-46
MsG0180003483.01	MsG0280008659.01	0.800478	1.414132e-48	6.591191e-46
MsG0180003483.01	MsG0280009656.01	0.807200	5.676983e-50	3.142501e-47
MsG0180003483.01	MsG0280010296.01	0.815353	9.655458e-52	6.641492e-49
MsG0180003483.01	MsG0280010410.01	0.810693	1.015143e-50	6.161162e-48
MsG0180003483.01	MsG0280011267.01	0.810713	1.005020e-50	6.102974e-48
MsG0180003483.01	MsG0380013272.01	0.812899	3.361653e-51	2.163479e-48
MsG0180003483.01	MsG0380014410.01	0.841444	4.733144e-58	6.956919e-55
MsG0180003483.01	MsG0380015572.01	0.802403	5.704956e-49	2.792177e-46
MsG0180003483.01	MsG0380016476.01	0.810057	1.392887e-50	8.312770e-48
MsG0180003483.01	MsG0380018004.01	0.807702	4.441616e-50	2.490951e-47
MsG0180003483.01	MsG0480018440.01	0.817855	2.655739e-52	1.956313e-49
MsG0180003483.01	MsG0480019666.01	0.803544	3.314082e-49	1.670028e-46
MsG0180003483.01	MsG0480020722.01	0.831758	1.392143e-55	1.525318e-52
MsG0180003483.01	MsG0480020814.01	0.818251	2.160769e-52	1.609013e-49
MsG0180003483.01	MsG0480022309.01	0.804133	2.500489e-49	1.279185e-46
MsG0180003483.01	MsG0480022735.01	0.817865	2.642301e-52	1.946912e-49
MsG0180003483.01	MsG0480023195.01	0.841918	3.549526e-58	5.294312e-55
MsG0180003483.01	MsG0480023322.01	0.828957	6.732470e-55	6.793351e-52
MsG0180003483.01	MsG0580025023.01	0.803047	4.199432e-49	2.089184e-46
MsG0180003483.01	MsG0580025117.01	0.804803	1.812389e-49	9.433787e-47
MsG0180003483.01	MsG0580027641.01	0.825006	5.928783e-54	5.338505e-51
MsG0180003483.01	MsG0580028565.01	0.805478	1.309386e-49	6.934414e-47
MsG0180003483.01	MsG0680030545.01	0.814795	1.284486e-51	8.702111e-49
MsG0180003483.01	MsG0680030960.01	0.807530	4.831511e-50	2.697564e-47
MsG0180003483.01	MsG0680030961.01	0.837187	6.027446e-57	7.769229e-54
MsG0180003483.01	MsG0680032343.01	0.825507	4.513332e-54	4.121881e-51
MsG0180003483.01	MsG0780036370.01	0.839070	1.974346e-57	2.695843e-54
MsG0180003483.01	MsG0780037182.01	0.812890	3.375698e-51	2.172046e-48
MsG0180003483.01	MsG0780038722.01	0.800899	1.160589e-48	5.467937e-46
MsG0180003483.01	MsG0780039190.01	0.802584	5.234822e-49	2.573789e-46
MsG0180003483.01	MsG0780039916.01	0.828778	7.441302e-55	7.469270e-52
MsG0180003483.01	MsG0780039923.01	0.815056	1.123872e-51	7.667706e-49
MsG0180003483.01	MsG0780040878.01	0.836589	8.564310e-57	1.084134e-53
MsG0180003483.01	MsG0780041180.01	0.823634	1.246138e-53	1.078995e-50
MsG0180003483.01	MsG0880042810.01	0.803814	2.912261e-49	1.477727e-46
MsG0180003483.01	MsG0880043983.01	0.800413	1.458460e-48	6.786839e-46
MsG0180003483.01	MsG0880045856.01	0.839191	1.836216e-57	2.516571e-54
MsG0180003483.01	MsG0880046463.01	0.825389	4.815403e-54	4.382892e-51
MsG0180003483.01	MsG0880047714.01	0.817609	3.018226e-52	2.208319e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003483.01.T01	MTR_1g062860	81.928	166	14	1	1	166	1	150	7.24e-96	279
MsG0180003483.01.T01	MTR_1g062880	63.793	116	41	1	44	159	29	143	1.42e-50	164
MsG0180003483.01.T01	MTR_7g102960	49.367	158	58	4	3	159	1	137	6.62e-46	152
MsG0180003483.01.T01	MTR_0219s0070	49.558	113	54	2	48	159	30	140	1.09e-31	115
MsG0180003483.01.T01	MTR_7g090950	45.794	107	57	1	53	159	32	137	5.56e-31	113
MsG0180003483.01.T01	MTR_1g059940	36.134	119	73	2	50	168	24	139	6.33e-22	89.4
MsG0180003483.01.T01	MTR_1g059960	36.111	108	66	2	50	157	3	107	8.75e-19	80.9
MsG0180003483.01.T01	MTR_1g059960	36.538	104	63	2	54	157	28	128	2.27e-18	80.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003483.01.T01	AT1G08080	52.101	119	56	1	48	166	34	151	1.56e-39	135
MsG0180003483.01.T01	AT4G20990	50.000	128	58	3	36	159	14	139	8.87e-38	130
MsG0180003483.01.T01	AT1G08065	51.240	121	56	3	48	166	29	148	6.33e-36	126
MsG0180003483.01.T01	AT2G28210	49.107	112	55	2	48	158	33	143	1.63e-34	119
MsG0180003483.01.T01	AT2G28210	45.833	120	63	2	48	166	33	151	4.86e-34	121
MsG0180003483.01.T01	AT4G21000	47.321	112	57	1	48	159	31	140	1.49e-33	119
MsG0180003483.01.T01	AT5G56330	45.455	121	63	3	48	166	134	253	6.85e-30	112
MsG0180003483.01.T01	AT5G56330	45.455	121	63	3	48	166	134	253	6.98e-30	111
MsG0180003483.01.T01	AT5G04180	42.478	113	65	0	49	161	21	133	6.17e-26	100
MsG0180003483.01.T01	AT3G52720	34.314	102	64	2	60	160	35	134	2.19e-15	71.2
MsG0180003483.01.T01	AT3G52720	34.653	101	63	2	61	160	36	134	6.09e-15	70.9
MsG0180003483.01.T01	AT3G52720	34.653	101	63	2	61	160	36	134	6.09e-15	70.9
MsG0180003483.01.T01	AT3G52720	34.653	101	63	2	61	160	36	134	6.09e-15	70.9

Find 28 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTGAATGTCGTAGGTATTT+TGG	0.225329	1:-63099310	MsG0180003483.01.T01:intron
GGCAATAGAAGATTTATATT+TGG	0.274180	1:+63100999	None:intergenic
TTAATAACTTGACGATAGTT+TGG	0.288647	1:+63101024	None:intergenic
TGAAAAGGGGCCACATCATT+GGG	0.321798	1:-63101133	MsG0180003483.01.T01:CDS
TCTTTCATTAGACAAATCTA+TGG	0.347466	1:+63101059	None:intergenic
TACATACTTCCTGCCATTGA+TGG	0.354563	1:+63099205	None:intergenic
GTGAAAAGGGGCCACATCAT+TGG	0.366240	1:-63101134	MsG0180003483.01.T01:CDS
AGAGAGTTCGATTATATTGA+AGG	0.392656	1:-63101159	MsG0180003483.01.T01:CDS
TATATTGAAGGAAGTGAAAA+GGG	0.411180	1:-63101147	MsG0180003483.01.T01:CDS
TTATATTGAAGGAAGTGAAA+AGG	0.457697	1:-63101148	MsG0180003483.01.T01:CDS
ATGGCCTCTATTGATGATAG+TGG	0.479480	1:+63100978	None:intergenic
CCTTCTGAACATTCCATCAA+TGG	0.483593	1:-63099218	MsG0180003483.01.T01:CDS
GCTGGCTCAATACGCATCAA+TGG	0.499449	1:-63099278	MsG0180003483.01.T01:CDS
TCAACAAGAGCTCAAGAAGT+TGG	0.522357	1:-63101328	MsG0180003483.01.T01:CDS
GTATGCTCACCGCAATATCA+TGG	0.524664	1:+63100959	None:intergenic
AAGGAGAGTGCCAGTGACAT+TGG	0.529345	1:+63099237	None:intergenic
ATTGCCACTATCATCAATAG+AGG	0.529463	1:-63100982	MsG0180003483.01.T01:CDS
GAATGGGCAGCTTGTAAACA+TGG	0.547630	1:-63101096	MsG0180003483.01.T01:CDS
CTGAACATTCCATCAATGGC+AGG	0.549730	1:-63099214	MsG0180003483.01.T01:CDS
CTTTCATTAGACAAATCTAT+GGG	0.568063	1:+63101060	None:intergenic
AAAAGGGGCCACATCATTGG+GGG	0.598096	1:-63101131	MsG0180003483.01.T01:CDS
AAATCATGAGTAAAGCTCGA+AGG	0.598503	1:+63101374	None:intergenic
GAAAAGGGGCCACATCATTG+GGG	0.601409	1:-63101132	MsG0180003483.01.T01:CDS
AATCATGAGTAAAGCTCGAA+GGG	0.602713	1:+63101375	None:intergenic
CCATTGATGGAATGTTCAGA+AGG	0.605461	1:+63099218	None:intergenic
CAATAGAGGCCATGATATTG+CGG	0.609893	1:-63100968	MsG0180003483.01.T01:intron
ATATTGAAGGAAGTGAAAAG+GGG	0.680584	1:-63101146	MsG0180003483.01.T01:CDS
AAAGGGGCCACATCATTGGG+GGG	0.779968	1:-63101130	MsG0180003483.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAATAAATATGTCTAT+AGG	+	Chr1:63100576-63100595	None:intergenic	10.0%
!!	AATTAATAAATATGTCTATA+GGG	+	Chr1:63100575-63100594	None:intergenic	10.0%
!!	ATATAATATAAATTTAAACC+CGG	-	Chr1:63100469-63100488	MsG0180003483.01.T01:intron	10.0%
!!!	ATGTAATTTTTTAATTTAAG+TGG	-	Chr1:63100272-63100291	MsG0180003483.01.T01:intron	10.0%
!!!	ATTTCTTTTTTTTTTTTTTG+AGG	-	Chr1:63100592-63100611	MsG0180003483.01.T01:intron	10.0%
!!!	TATATTTTATGATTTTTTGT+TGG	-	Chr1:63099745-63099764	MsG0180003483.01.T01:intron	10.0%
!!!	TGTAATTTTTTAATTTAAGT+GGG	-	Chr1:63100273-63100292	MsG0180003483.01.T01:intron	10.0%
!!!	TTTTGTTTATATTTAATACA+GGG	+	Chr1:63100381-63100400	None:intergenic	10.0%
!!!	TTTTTGTTTATATTTAATAC+AGG	+	Chr1:63100382-63100401	None:intergenic	10.0%
!!!	TTTTTTTAATTAATCAGAAA+TGG	-	Chr1:63101061-63101080	MsG0180003483.01.T01:CDS	10.0%
!!	AAAGTTAAATGTATTTGATT+CGG	-	Chr1:63100399-63100418	MsG0180003483.01.T01:intron	15.0%
!!	AGTTTATTCTAGATAAAAAA+GGG	+	Chr1:63099321-63099340	None:intergenic	15.0%
!!	TAGTTTATTCTAGATAAAAA+AGG	+	Chr1:63099322-63099341	None:intergenic	15.0%
!!	TTCTCTTTAATATTAAATCA+GGG	-	Chr1:63099833-63099852	MsG0180003483.01.T01:intron	15.0%
!!	TTTAAAAAGAAATTCTATCA+AGG	+	Chr1:63101403-63101422	None:intergenic	15.0%
!!	TTTCTCTTTAATATTAAATC+AGG	-	Chr1:63099832-63099851	MsG0180003483.01.T01:intron	15.0%
!!!	GTAATTTTTTAATTTAAGTG+GGG	-	Chr1:63100274-63100293	MsG0180003483.01.T01:intron	15.0%
!!!	TAATTTTTTAATTTAAGTGG+GGG	-	Chr1:63100275-63100294	MsG0180003483.01.T01:intron	15.0%
!!!	TTCTTTTTTTTTTCTTTTGA+AGG	-	Chr1:63100653-63100672	MsG0180003483.01.T01:intron	15.0%
!!	AAAAAATTCTTTACCAACAA+AGG	+	Chr1:63101045-63101064	None:intergenic	20.0%
!!	AATAAAATTAAGTGAAAGAG+AGG	-	Chr1:63100010-63100029	MsG0180003483.01.T01:intron	20.0%
!!	AATATACTAGTACTACTATA+TGG	+	Chr1:63100543-63100562	None:intergenic	20.0%
!!	TAAGTGATTATACAAATTGA+TGG	-	Chr1:63100164-63100183	MsG0180003483.01.T01:intron	20.0%
!!	TTCACATATAAATGATCTAA+TGG	+	Chr1:63101248-63101267	None:intergenic	20.0%
!!!	AAATGCGTTTTTATTTTACT+CGG	+	Chr1:63099922-63099941	None:intergenic	20.0%
!!!	CGGTATTATAATTTTTTTTG+AGG	-	Chr1:63100299-63100318	MsG0180003483.01.T01:intron	20.0%
!!!	TATCTTTTAGATACTTATGT+TGG	+	Chr1:63100862-63100881	None:intergenic	20.0%
!!!	TTTTGTTAAAAGAGGTTTTT+TGG	-	Chr1:63099667-63099686	MsG0180003483.01.T01:intron	20.0%
!	ACTTAATCAGTCAATTTGAA+AGG	+	Chr1:63100149-63100168	None:intergenic	25.0%
!	ATATAATTCTATCCGATTCT+AGG	+	Chr1:63099730-63099749	None:intergenic	25.0%
!	ATCAAGATACAAATATCGAT+CGG	+	Chr1:63100983-63101002	None:intergenic	25.0%
!	ATCAATCGTACAATCATAAA+TGG	+	Chr1:63099706-63099725	None:intergenic	25.0%
!	CTTTCATTAGACAAATCTAT+GGG	+	Chr1:63099515-63099534	None:intergenic	25.0%
!	GGCAATAGAAGATTTATATT+TGG	+	Chr1:63099576-63099595	None:intergenic	25.0%
!	TATAATTCTATCCGATTCTA+GGG	+	Chr1:63099729-63099748	None:intergenic	25.0%
!	TATATTGAAGGAAGTGAAAA+GGG	-	Chr1:63099425-63099444	MsG0180003483.01.T01:intron	25.0%
!	TCAATCGTACAATCATAAAT+GGG	+	Chr1:63099705-63099724	None:intergenic	25.0%
!	TCTTTCATTAGACAAATCTA+TGG	+	Chr1:63099516-63099535	None:intergenic	25.0%
!	TTAATAACTTGACGATAGTT+TGG	+	Chr1:63099551-63099570	None:intergenic	25.0%
!	TTATATTGAAGGAAGTGAAA+AGG	-	Chr1:63099424-63099443	MsG0180003483.01.T01:intron	25.0%
!!	TGTAGTACATAAATTGACTT+TGG	-	Chr1:63100769-63100788	MsG0180003483.01.T01:intron	25.0%
!!!	AATGCGTTTTTATTTTACTC+GGG	+	Chr1:63099921-63099940	None:intergenic	25.0%
!!!	CTCGGTTCTATTTTTAAAAT+AGG	-	Chr1:63099895-63099914	MsG0180003483.01.T01:intron	25.0%
!!!	TGTTGTTGTTTTGTTAAAAG+AGG	-	Chr1:63099659-63099678	MsG0180003483.01.T01:intron	25.0%
	ACATTGGTGCAAAAAGAATT+TGG	+	Chr1:63101322-63101341	None:intergenic	30.0%
	AGAGAGTTCGATTATATTGA+AGG	-	Chr1:63099413-63099432	MsG0180003483.01.T01:intron	30.0%
	ATATTGAAGGAAGTGAAAAG+GGG	-	Chr1:63099426-63099445	MsG0180003483.01.T01:intron	30.0%
	CATTTATATGTGAATGTCGT+AGG	-	Chr1:63101254-63101273	MsG0180003483.01.T01:intron	30.0%
	CTCTAGTAATACAAATCGAA+AGG	+	Chr1:63099776-63099795	None:intergenic	30.0%
	GTGATTATACAAATTGATGG+TGG	-	Chr1:63100167-63100186	MsG0180003483.01.T01:intron	30.0%
	GTTTATATTTAATACAGGGC+CGG	+	Chr1:63100377-63100396	None:intergenic	30.0%
!!!	GTATGTTTTTCAATTTGCTG+AGG	-	Chr1:63101088-63101107	MsG0180003483.01.T01:CDS	30.0%
!!!	GTTATATTTTAGTGTCTGAC+AGG	+	Chr1:63100961-63100980	None:intergenic	30.0%
!!!	TTTTTAATTTAAGTGGGGGT+CGG	-	Chr1:63100279-63100298	MsG0180003483.01.T01:intron	30.0%
	AAATCATGAGTAAAGCTCGA+AGG	+	Chr1:63099201-63099220	None:intergenic	35.0%
	AACGGCCCTGATTTAATATA+CGG	+	Chr1:63099859-63099878	None:intergenic	35.0%
	AATCATGAGTAAAGCTCGAA+GGG	+	Chr1:63099200-63099219	None:intergenic	35.0%
	ATTGCCACTATCATCAATAG+AGG	-	Chr1:63099590-63099609	MsG0180003483.01.T01:intron	35.0%
	CTCTTAAACTCAACCTTTGT+TGG	-	Chr1:63101029-63101048	MsG0180003483.01.T01:CDS	35.0%
	GAGAGGTGAAATTTACCTAA+CGG	-	Chr1:63100027-63100046	MsG0180003483.01.T01:intron	35.0%
	TATGGTATACGTAGTAACGT+AGG	+	Chr1:63100525-63100544	None:intergenic	35.0%
!	TGAAGTTGTGCATTTTGTAG+AGG	-	Chr1:63099385-63099404	MsG0180003483.01.T01:intron	35.0%
!	TGTGAATGTCGTAGGTATTT+TGG	-	Chr1:63101262-63101281	MsG0180003483.01.T01:intron	35.0%
!!	AATGTCGTAGGTATTTTGGA+GGG	-	Chr1:63101266-63101285	MsG0180003483.01.T01:intron	35.0%
!!	TAGACTCTAGTTCTACTTTC+TGG	+	Chr1:63100215-63100234	None:intergenic	35.0%
!!	TTATGTGCATGAGTTTTGTG+CGG	+	Chr1:63100743-63100762	None:intergenic	35.0%
!!!	TTTTTGAGGCCCATCATTTT+TGG	-	Chr1:63100313-63100332	MsG0180003483.01.T01:intron	35.0%
	AGCCTCCTATTTCATAGGAA+CGG	+	Chr1:63099877-63099896	None:intergenic	40.0%
	CAATAGAGGCCATGATATTG+CGG	-	Chr1:63099604-63099623	MsG0180003483.01.T01:intron	40.0%
	CAGGGCCGTATATTAAATCA+GGG	-	Chr1:63099851-63099870	MsG0180003483.01.T01:intron	40.0%
	CCATTGATGGAATGTTCAGA+AGG	+	Chr1:63101357-63101376	None:intergenic	40.0%
	CCTTCTGAACATTCCATCAA+TGG	-	Chr1:63101354-63101373	MsG0180003483.01.T01:CDS	40.0%
	GGGGGAGATAAAAGAAGAAT+GGG	-	Chr1:63099460-63099479	MsG0180003483.01.T01:intron	40.0%
	GTACGATTGATCCCTAGAAT+CGG	-	Chr1:63099715-63099734	MsG0180003483.01.T01:intron	40.0%
	TACATACTTCCTGCCATTGA+TGG	+	Chr1:63101370-63101389	None:intergenic	40.0%
	TCAACAAGAGCTCAAGAAGT+TGG	-	Chr1:63099244-63099263	MsG0180003483.01.T01:CDS	40.0%
	TCAGGGCCGTATATTAAATC+AGG	-	Chr1:63099850-63099869	MsG0180003483.01.T01:intron	40.0%
	TCCAACAAACGTTTGACTCT+TGG	-	Chr1:63101143-63101162	MsG0180003483.01.T01:CDS	40.0%
	TGGATGATGACACAACTAGT+AGG	+	Chr1:63101127-63101146	None:intergenic	40.0%
	TTAAACCCGGCTGCATTTAT+TGG	-	Chr1:63100482-63100501	MsG0180003483.01.T01:intron	40.0%
	TTCCTATGAAATAGGAGGCT+CGG	-	Chr1:63099877-63099896	MsG0180003483.01.T01:intron	40.0%
!	ATGGCCTCTATTGATGATAG+TGG	+	Chr1:63099597-63099616	None:intergenic	40.0%
!	TCTTTTTGCACCAATGTCAC+TGG	-	Chr1:63101325-63101344	MsG0180003483.01.T01:CDS	40.0%
!!	ATGTCGTAGGTATTTTGGAG+GGG	-	Chr1:63101267-63101286	MsG0180003483.01.T01:intron	40.0%
!!	ATTTACCTAACGGTGCCATT+TGG	-	Chr1:63100037-63100056	MsG0180003483.01.T01:intron	40.0%
!!	GAATGTCGTAGGTATTTTGG+AGG	-	Chr1:63101265-63101284	MsG0180003483.01.T01:intron	40.0%
	AACCGAGCCTCCAAAAATGA+TGG	+	Chr1:63100326-63100345	None:intergenic	45.0%
	AACCGAGCCTCCTATTTCAT+AGG	+	Chr1:63099882-63099901	None:intergenic	45.0%
	ACATTCCAAATGGCACCGTT+AGG	+	Chr1:63100045-63100064	None:intergenic	45.0%
	ACCGAGCCTCCAAAAATGAT+GGG	+	Chr1:63100325-63100344	None:intergenic	45.0%
	CATGTCCAATAAATGCAGCC+GGG	+	Chr1:63100490-63100509	None:intergenic	45.0%
	CGTAGGAGTGACATTCCAAA+TGG	+	Chr1:63100055-63100074	None:intergenic	45.0%
	CTGAACATTCCATCAATGGC+AGG	-	Chr1:63101358-63101377	MsG0180003483.01.T01:CDS	45.0%
	GAATGGGCAGCTTGTAAACA+TGG	-	Chr1:63099476-63099495	MsG0180003483.01.T01:intron	45.0%
	GCATGTCCAATAAATGCAGC+CGG	+	Chr1:63100491-63100510	None:intergenic	45.0%
	GCCAAGAGTCAAACGTTTGT+TGG	+	Chr1:63101147-63101166	None:intergenic	45.0%
	GGGGGGAGATAAAAGAAGAA+TGG	-	Chr1:63099459-63099478	MsG0180003483.01.T01:intron	45.0%
	GTATGCTCACCGCAATATCA+TGG	+	Chr1:63099616-63099635	None:intergenic	45.0%
	TATGCAGCAGAGCAAAGCTT+GGG	+	Chr1:63100808-63100827	None:intergenic	45.0%
	TGAAAAGGGGCCACATCATT+GGG	-	Chr1:63099439-63099458	MsG0180003483.01.T01:intron	45.0%
	TTATGCAGCAGAGCAAAGCT+TGG	+	Chr1:63100809-63100828	None:intergenic	45.0%
	TTTATCTCCCCCCAATGATG+TGG	+	Chr1:63099452-63099471	None:intergenic	45.0%
!	TTTTCCCTTTCCTACGACGT+AGG	+	Chr1:63100072-63100091	None:intergenic	45.0%
!!	TTGAGGCCCATCATTTTTGG+AGG	-	Chr1:63100316-63100335	MsG0180003483.01.T01:intron	45.0%
	AAAAGGGGCCACATCATTGG+GGG	-	Chr1:63099441-63099460	MsG0180003483.01.T01:intron	50.0%
	CACTCCTACGTCGTAGGAAA+GGG	-	Chr1:63100065-63100084	MsG0180003483.01.T01:intron	50.0%
	CAGGGCCGTTCCTATGAAAT+AGG	-	Chr1:63099869-63099888	MsG0180003483.01.T01:intron	50.0%
	GAAAAGGGGCCACATCATTG+GGG	-	Chr1:63099440-63099459	MsG0180003483.01.T01:intron	50.0%
	GAATGTCACTCCTACGTCGT+AGG	-	Chr1:63100059-63100078	MsG0180003483.01.T01:intron	50.0%
	GGCCGTTCCTATGAAATAGG+AGG	-	Chr1:63099872-63099891	MsG0180003483.01.T01:intron	50.0%
	GTGAAAAGGGGCCACATCAT+TGG	-	Chr1:63099438-63099457	MsG0180003483.01.T01:intron	50.0%
	TCACTCCTACGTCGTAGGAA+AGG	-	Chr1:63100064-63100083	MsG0180003483.01.T01:intron	50.0%
!	GCTGGCTCAATACGCATCAA+TGG	-	Chr1:63101294-63101313	MsG0180003483.01.T01:intron	50.0%
!!	AAGGAGAGTGCCAGTGACAT+TGG	+	Chr1:63101338-63101357	None:intergenic	50.0%
!!	GCCCATCATTTTTGGAGGCT+CGG	-	Chr1:63100321-63100340	MsG0180003483.01.T01:intron	50.0%
!!	GTATTTTGGAGGGGTGATGC+TGG	-	Chr1:63101276-63101295	MsG0180003483.01.T01:intron	50.0%
	AAAGGGGCCACATCATTGGG+GGG	-	Chr1:63099442-63099461	MsG0180003483.01.T01:intron	55.0%
	AGAACCTCTTGCACTCCCCA+GGG	-	Chr1:63100350-63100369	MsG0180003483.01.T01:intron	55.0%
	CAGCAGAGCAAAGCTTGGGA+TGG	+	Chr1:63100804-63100823	None:intergenic	55.0%
	TAGAACCTCTTGCACTCCCC+AGG	-	Chr1:63100349-63100368	MsG0180003483.01.T01:intron	55.0%
	TTAATACAGGGCCGGACCCT+GGG	+	Chr1:63100369-63100388	None:intergenic	55.0%
	TTTAATACAGGGCCGGACCC+TGG	+	Chr1:63100370-63100389	None:intergenic	55.0%
	TAATACAGGGCCGGACCCTG+GGG	+	Chr1:63100368-63100387	None:intergenic	60.0%
	CTCTTGCACTCCCCAGGGTC+CGG	-	Chr1:63100355-63100374	MsG0180003483.01.T01:intron	65.0%
!	CGGACCCTGGGGAGTGCAAG+AGG	+	Chr1:63100357-63100376	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	63099169	63101425	63099169	ID=MsG0180003483.01;Name=MsG0180003483.01
Chr1	mRNA	63099169	63101425	63099169	ID=MsG0180003483.01.T01;Parent=MsG0180003483.01;Name=MsG0180003483.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|0\|0\|1\|0\|0\|3\|0\|171
Chr1	exon	63101304	63101425	63101304	ID=MsG0180003483.01.T01:exon:4636;Parent=MsG0180003483.01.T01
Chr1	exon	63100969	63101212	63100969	ID=MsG0180003483.01.T01:exon:4635;Parent=MsG0180003483.01.T01
Chr1	exon	63099169	63099318	63099169	ID=MsG0180003483.01.T01:exon:4634;Parent=MsG0180003483.01.T01
Chr1	CDS	63101304	63101425	63101304	ID=MsG0180003483.01.T01:cds;Parent=MsG0180003483.01.T01
Chr1	CDS	63100969	63101212	63100969	ID=MsG0180003483.01.T01:cds;Parent=MsG0180003483.01.T01
Chr1	CDS	63099169	63099318	63099169	ID=MsG0180003483.01.T01:cds;Parent=MsG0180003483.01.T01

Gene Sequence

>MsG0180003483.01.T01

ATGAAGCTTGAAAGAGAGAATGCATACACCCTTCGAGCTTTACTCATGATTTTGATTATCTTGTTATACACAACATCAACAAGAGCTCAAGAAGTTGGTAAATATTGTTTTAACTACATTTTAAATGAAGTTGTGCATTTTGTAGAGGACGAGAGAGAGTTCGATTATATTGAAGGAAGTGAAAAGGGGCCACATCATTGGGGGGAGATAAAAGAAGAATGGGCAGCTTGTAAACATGGAGACATGCAATCTCCCATAGATTTGTCTAATGAAAGAGTCAAAATTATTCCAAACTATCGTCAAGTTATTAAGACCAAATATAAATCTTCTATTGCCACTATCATCAATAGAGGCCATGATATTGCGGTATTTTGGAGGGGTGATGCTGGCTCAATACGCATCAATGGAACCAAATTCTTTTTGCACCAATGTCACTGGCACTCTCCTTCTGAACATTCCATCAATGGCAGGAAGTATGTATTTGCTTCTTCCTTGATAGAATTTCTTTTTAAATAA

Protein sequence

>MsG0180003483.01.T01

MKLERENAYTLRALLMILIILLYTTSTRAQEVGKYCFNYILNEVVHFVEDEREFDYIEGSEKGPHHWGEIKEEWAACKHGDMQSPIDLSNERVKIIPNYRQVIKTKYKSSIATIINRGHDIAVFWRGDAGSIRINGTKFFLHQCHWHSPSEHSINGRKYVFASSLIEFLFK*