Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004977.01.T01 | XP_024640215.1 | 96.651 | 209 | 7 | 0 | 1 | 209 | 47 | 255 | 1.12E-144 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004977.01.T01 | A0A396JYH2 | 96.651 | 209 | 7 | 0 | 1 | 209 | 47 | 255 | 5.36e-145 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048992.01 | MsG0180004977.01 | 0.822645 | 2.120822e-53 | 1.785743e-50 |
| MsG0080049016.01 | MsG0180004977.01 | 0.829748 | 4.328456e-55 | 4.470900e-52 |
| MsG0080049018.01 | MsG0180004977.01 | 0.834816 | 2.407675e-56 | 2.889648e-53 |
| MsG0180000459.01 | MsG0180004977.01 | 0.810615 | 1.055388e-50 | 6.391891e-48 |
| MsG0180000502.01 | MsG0180004977.01 | 0.803987 | 2.681696e-49 | 1.366829e-46 |
| MsG0180001054.01 | MsG0180004977.01 | 0.829201 | 5.876442e-55 | 5.973407e-52 |
| MsG0180004977.01 | MsG0180004978.01 | 0.847509 | 1.105941e-59 | 1.970146e-56 |
| MsG0180004977.01 | MsG0180005991.01 | 0.806541 | 7.825319e-50 | 4.258575e-47 |
| MsG0180004977.01 | MsG0280006451.01 | 0.812706 | 3.704169e-51 | 2.371850e-48 |
| MsG0180004977.01 | MsG0280006534.01 | 0.800364 | 1.491788e-48 | 6.933345e-46 |
| MsG0180004977.01 | MsG0280007600.01 | 0.815870 | 7.405872e-52 | 5.166662e-49 |
| MsG0180004977.01 | MsG0280010461.01 | 0.819412 | 1.177506e-52 | 9.054599e-50 |
| MsG0180004977.01 | MsG0280010994.01 | 0.800658 | 1.299575e-48 | 6.085221e-46 |
| MsG0180004977.01 | MsG0380014557.01 | 0.803667 | 3.125278e-49 | 1.579726e-46 |
| MsG0180004977.01 | MsG0380015446.01 | -0.812644 | 3.821372e-51 | 2.442954e-48 |
| MsG0180004977.01 | MsG0380017385.01 | 0.802740 | 4.860314e-49 | 2.399293e-46 |
| MsG0180004977.01 | MsG0480018088.01 | 0.836575 | 8.635455e-57 | 1.092649e-53 |
| MsG0180004977.01 | MsG0480019604.01 | 0.833915 | 4.053173e-56 | 4.735677e-53 |
| MsG0180004977.01 | MsG0480022935.01 | 0.809037 | 2.306694e-50 | 1.339879e-47 |
| MsG0180004977.01 | MsG0480023056.01 | 0.802587 | 5.227239e-49 | 2.570290e-46 |
| MsG0180004977.01 | MsG0480023708.01 | 0.807205 | 5.664675e-50 | 3.136049e-47 |
| MsG0180004977.01 | MsG0580024673.01 | 0.804675 | 1.928099e-49 | 1.000220e-46 |
| MsG0180004977.01 | MsG0580024768.01 | 0.811684 | 6.188714e-51 | 3.855643e-48 |
| MsG0180004977.01 | MsG0580027099.01 | 0.805683 | 1.185855e-49 | 6.313694e-47 |
| MsG0180004977.01 | MsG0680030441.01 | 0.817189 | 3.750943e-52 | 2.712991e-49 |
| MsG0180004977.01 | MsG0680030879.01 | 0.807914 | 4.005491e-50 | 2.258681e-47 |
| MsG0180004977.01 | MsG0780037473.01 | 0.800416 | 1.456390e-48 | 6.777716e-46 |
| MsG0180004977.01 | MsG0780038030.01 | 0.815164 | 1.063531e-51 | 7.277220e-49 |
| MsG0180004977.01 | MsG0780038108.01 | 0.813911 | 2.014179e-51 | 1.332263e-48 |
| MsG0180004977.01 | MsG0780038263.01 | 0.812006 | 5.266712e-51 | 3.309785e-48 |
| MsG0180004977.01 | MsG0780039382.01 | 0.801333 | 9.461412e-49 | 4.506444e-46 |
| MsG0180004977.01 | MsG0780039508.01 | 0.813741 | 2.195047e-51 | 1.445289e-48 |
| MsG0180004977.01 | MsG0780040849.01 | 0.806519 | 7.909980e-50 | 4.302206e-47 |
| MsG0180004977.01 | MsG0880044968.01 | 0.805129 | 1.549579e-49 | 8.133404e-47 |
| MsG0180004977.01 | MsG0880045400.01 | 0.836606 | 8.481272e-57 | 1.074122e-53 |
| MsG0180004977.01 | MsG0880045755.01 | 0.804870 | 1.755124e-49 | 9.151955e-47 |
| MsG0180004977.01 | MsG0880046189.01 | 0.814502 | 1.491444e-51 | 1.002527e-48 |
| MsG0180004977.01 | MsG0880046347.01 | 0.818914 | 1.528224e-52 | 1.159189e-49 |
| MsG0180004977.01 | MsG0880046856.01 | 0.821273 | 4.408156e-53 | 3.569654e-50 |
| MsG0180004977.01 | MsG0880046968.01 | 0.817149 | 3.829862e-52 | 2.767122e-49 |
| MsG0180004977.01 | MsG0880047251.01 | 0.827454 | 1.550298e-54 | 1.497448e-51 |
| MsG0180004977.01 | MsG0880047660.01 | 0.802186 | 6.322290e-49 | 3.077037e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004977.01.T01 | MTR_1g090687 | 96.651 | 209 | 7 | 0 | 1 | 209 | 38 | 246 | 1.76e-148 | 430 |
| MsG0180004977.01.T01 | MTR_1g090683 | 77.033 | 209 | 45 | 1 | 1 | 209 | 49 | 254 | 2.52e-112 | 337 |
| MsG0180004977.01.T01 | MTR_8g020780 | 45.355 | 183 | 97 | 1 | 1 | 180 | 49 | 231 | 1.26e-51 | 178 |
| MsG0180004977.01.T01 | MTR_1g022060 | 41.872 | 203 | 109 | 2 | 2 | 201 | 31 | 227 | 5.93e-41 | 148 |
| MsG0180004977.01.T01 | MTR_2g048300 | 39.130 | 138 | 82 | 1 | 1 | 136 | 31 | 168 | 2.39e-28 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004977.01.T01 | AT5G45470 | 51.176 | 170 | 78 | 3 | 2 | 167 | 31 | 199 | 3.91e-45 | 160 |
| MsG0180004977.01.T01 | AT5G45460 | 49.112 | 169 | 81 | 3 | 3 | 167 | 32 | 199 | 7.81e-43 | 153 |
| MsG0180004977.01.T01 | AT5G45540 | 46.746 | 169 | 85 | 2 | 2 | 166 | 31 | 198 | 2.94e-42 | 152 |
| MsG0180004977.01.T01 | AT5G45480 | 42.439 | 205 | 106 | 4 | 3 | 201 | 32 | 230 | 3.04e-40 | 146 |
| MsG0180004977.01.T01 | AT5G45530 | 43.860 | 171 | 85 | 3 | 3 | 166 | 31 | 197 | 1.45e-35 | 133 |
| MsG0180004977.01.T01 | AT4G19090 | 50.495 | 101 | 49 | 1 | 55 | 155 | 82 | 181 | 1.93e-24 | 101 |
Find 58 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATGATCTTTAGTGTCTT+TGG | 0.208303 | 1:+85124099 | None:intergenic |
| TTGGTTCTCCCTTGAGTATT+AGG | 0.249278 | 1:+85123662 | None:intergenic |
| AAAGGCTAAAATTGTTGATA+TGG | 0.257398 | 1:-85124174 | MsG0180004977.01.T01:CDS |
| CATAAACTGCAACTGCTAAT+TGG | 0.259955 | 1:+85123942 | None:intergenic |
| CCATTTCTCCTTGTGCATCT+TGG | 0.274921 | 1:-85124040 | MsG0180004977.01.T01:CDS |
| TGAAACTACTCCCTTAGTTT+TGG | 0.276491 | 1:-85123687 | MsG0180004977.01.T01:CDS |
| CACTTATCTGTCAGCTGATT+GGG | 0.277339 | 1:-85124149 | MsG0180004977.01.T01:CDS |
| AGTTTCATTAATTTCATCTA+AGG | 0.293820 | 1:+85123703 | None:intergenic |
| TCACGTAAAGCTTGACTATC+TGG | 0.300740 | 1:+85123620 | None:intergenic |
| TCCATGAATTTAGCATAGTT+TGG | 0.319706 | 1:+85123764 | None:intergenic |
| ATTATTCCTGCCACGACAAT+AGG | 0.320930 | 1:+85123872 | None:intergenic |
| TTGCAGTTTATGTTGTTTAT+CGG | 0.324974 | 1:-85123931 | MsG0180004977.01.T01:CDS |
| TCACTTATCTGTCAGCTGAT+TGG | 0.326710 | 1:-85124150 | MsG0180004977.01.T01:CDS |
| GGAAGCATGTAGTTGATAAA+AGG | 0.327912 | 1:-85124192 | MsG0180004977.01.T01:CDS |
| GCATAGTTTGGTCCTGGGTC+TGG | 0.329432 | 1:+85123776 | None:intergenic |
| AGACACCAACTTCGTAATTA+TGG | 0.335596 | 1:-85124074 | MsG0180004977.01.T01:CDS |
| TTGGGTTGCTACCGTTGCTC+TGG | 0.357896 | 1:-85124131 | MsG0180004977.01.T01:CDS |
| GTGGCAGGAATAATCAAATA+TGG | 0.362119 | 1:-85123863 | MsG0180004977.01.T01:CDS |
| TCTGAATCCATCGCTGCTTC+CGG | 0.377026 | 1:+85123817 | None:intergenic |
| TTTGGTCCTGGGTCTGGAGG+AGG | 0.393596 | 1:+85123782 | None:intergenic |
| TCAAATATGGTGAGAGGACT+TGG | 0.397112 | 1:-85123850 | MsG0180004977.01.T01:CDS |
| ACTTCGTAATTATGGCCATC+TGG | 0.404255 | 1:-85124066 | MsG0180004977.01.T01:CDS |
| ACCAAACTATGCTAAATTCA+TGG | 0.409018 | 1:-85123765 | MsG0180004977.01.T01:CDS |
| AATTTAGCATAGTTTGGTCC+TGG | 0.419818 | 1:+85123770 | None:intergenic |
| CCAAGATGCACAAGGAGAAA+TGG | 0.430462 | 1:+85124040 | None:intergenic |
| TAGGAACGGTGACATACTTA+AGG | 0.432961 | 1:+85123891 | None:intergenic |
| TTTATGTTGTTTATCGGTCA+TGG | 0.437220 | 1:-85123925 | MsG0180004977.01.T01:CDS |
| TTTCTCCTTGTGCATCTTGG+TGG | 0.441469 | 1:-85124037 | MsG0180004977.01.T01:CDS |
| GAGTAGGCAGTGATTGTGTC+AGG | 0.469509 | 1:+85124013 | None:intergenic |
| AGTATTAGGATCCAAAACTA+AGG | 0.474378 | 1:+85123676 | None:intergenic |
| TTGGTCCTGGGTCTGGAGGA+GGG | 0.477210 | 1:+85123783 | None:intergenic |
| TATCAACTACATGCTTCCTT+CGG | 0.479055 | 1:+85124197 | None:intergenic |
| ACCGTTCCTATTGTCGTGGC+AGG | 0.487038 | 1:-85123878 | MsG0180004977.01.T01:CDS |
| CTGCGGTCCGGAAGCAGCGA+TGG | 0.489508 | 1:-85123824 | MsG0180004977.01.T01:CDS |
| CTTCGTAATTATGGCCATCT+GGG | 0.491238 | 1:-85124065 | MsG0180004977.01.T01:CDS |
| CTTTACGTGATGGCGCTGTA+TGG | 0.502909 | 1:-85123607 | MsG0180004977.01.T01:CDS |
| ATTTAGCATAGTTTGGTCCT+GGG | 0.515262 | 1:+85123771 | None:intergenic |
| AGGACTTGGTCACTGCGGTC+CGG | 0.530660 | 1:-85123836 | MsG0180004977.01.T01:CDS |
| TGGGTTGCTACCGTTGCTCT+GGG | 0.532615 | 1:-85124130 | MsG0180004977.01.T01:CDS |
| TAGTTTGGTCCTGGGTCTGG+AGG | 0.533953 | 1:+85123779 | None:intergenic |
| GATGGCCATAATTACGAAGT+TGG | 0.546121 | 1:+85124069 | None:intergenic |
| AGGAACGGTGACATACTTAA+GGG | 0.549631 | 1:+85123892 | None:intergenic |
| AAGGAGAAATGGTGCCCAGA+TGG | 0.549704 | 1:+85124051 | None:intergenic |
| GGTGACATACTTAAGGGGAT+TGG | 0.573721 | 1:+85123898 | None:intergenic |
| TTGGTTGTCTTCAAGAGAGT+AGG | 0.573804 | 1:+85123997 | None:intergenic |
| GCATATGTCGTGGCCACAGT+TGG | 0.576298 | 1:+85123978 | None:intergenic |
| GATAGTCAAGCTTTACGTGA+TGG | 0.584076 | 1:-85123617 | MsG0180004977.01.T01:CDS |
| ATTCTCCCTCCTCCAGACCC+AGG | 0.596606 | 1:-85123788 | MsG0180004977.01.T01:CDS |
| GGAAAGAATTCCCAGAGCAA+CGG | 0.617429 | 1:+85124120 | None:intergenic |
| TGTCACCGTTCCTATTGTCG+TGG | 0.631284 | 1:-85123882 | MsG0180004977.01.T01:CDS |
| GAATAATCAAATATGGTGAG+AGG | 0.632365 | 1:-85123856 | MsG0180004977.01.T01:CDS |
| GTATTAGGATCCAAAACTAA+GGG | 0.633824 | 1:+85123677 | None:intergenic |
| TCCTGCCACGACAATAGGAA+CGG | 0.646988 | 1:+85123877 | None:intergenic |
| CTCTTGAAGACAACCAACTG+TGG | 0.654311 | 1:-85123991 | MsG0180004977.01.T01:CDS |
| CAGGACCACCAAGATGCACA+AGG | 0.664529 | 1:+85124032 | None:intergenic |
| GGAACGGTGACATACTTAAG+GGG | 0.681590 | 1:+85123893 | None:intergenic |
| AGTAATTCAAGCATATGTCG+TGG | 0.691047 | 1:+85123968 | None:intergenic |
| GTGAGAGGACTTGGTCACTG+CGG | 0.730382 | 1:-85123841 | MsG0180004977.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTGTATTTGGTATTT+TGG | + | Chr1:85124166-85124185 | None:intergenic | 15.0% |
| !! | AGTTTCATTAATTTCATCTA+AGG | + | Chr1:85124106-85124125 | None:intergenic | 20.0% |
| ! | AAAGGCTAAAATTGTTGATA+TGG | - | Chr1:85123632-85123651 | MsG0180004977.01.T01:CDS | 25.0% |
| !! | TTGCAGTTTATGTTGTTTAT+CGG | - | Chr1:85123875-85123894 | MsG0180004977.01.T01:CDS | 25.0% |
| !!! | CTATCTGGAATTTTTGTATT+TGG | + | Chr1:85124174-85124193 | None:intergenic | 25.0% |
| ACCAAACTATGCTAAATTCA+TGG | - | Chr1:85124041-85124060 | MsG0180004977.01.T01:CDS | 30.0% | |
| AGTATTAGGATCCAAAACTA+AGG | + | Chr1:85124133-85124152 | None:intergenic | 30.0% | |
| CTTATGATCTTTAGTGTCTT+TGG | + | Chr1:85123710-85123729 | None:intergenic | 30.0% | |
| GAATAATCAAATATGGTGAG+AGG | - | Chr1:85123950-85123969 | MsG0180004977.01.T01:CDS | 30.0% | |
| GTATTAGGATCCAAAACTAA+GGG | + | Chr1:85124132-85124151 | None:intergenic | 30.0% | |
| TACACTGCTAAAAAAGATGA+AGG | - | Chr1:85124069-85124088 | MsG0180004977.01.T01:CDS | 30.0% | |
| TCCATGAATTTAGCATAGTT+TGG | + | Chr1:85124045-85124064 | None:intergenic | 30.0% | |
| ! | TTTATGTTGTTTATCGGTCA+TGG | - | Chr1:85123881-85123900 | MsG0180004977.01.T01:CDS | 30.0% |
| ! | TTTTGGATCCTAATACTCAA+GGG | - | Chr1:85124136-85124155 | MsG0180004977.01.T01:CDS | 30.0% |
| AATTTAGCATAGTTTGGTCC+TGG | + | Chr1:85124039-85124058 | None:intergenic | 35.0% | |
| AGACACCAACTTCGTAATTA+TGG | - | Chr1:85123732-85123751 | MsG0180004977.01.T01:CDS | 35.0% | |
| AGTAATTCAAGCATATGTCG+TGG | + | Chr1:85123841-85123860 | None:intergenic | 35.0% | |
| ATTTAGCATAGTTTGGTCCT+GGG | + | Chr1:85124038-85124057 | None:intergenic | 35.0% | |
| CATAAACTGCAACTGCTAAT+TGG | + | Chr1:85123867-85123886 | None:intergenic | 35.0% | |
| GTGGCAGGAATAATCAAATA+TGG | - | Chr1:85123943-85123962 | MsG0180004977.01.T01:CDS | 35.0% | |
| TATCAACTACATGCTTCCTT+CGG | + | Chr1:85123612-85123631 | None:intergenic | 35.0% | |
| ! | TGAAACTACTCCCTTAGTTT+TGG | - | Chr1:85124119-85124138 | MsG0180004977.01.T01:CDS | 35.0% |
| !! | GGAAGCATGTAGTTGATAAA+AGG | - | Chr1:85123614-85123633 | MsG0180004977.01.T01:CDS | 35.0% |
| !! | GTTTTGGATCCTAATACTCA+AGG | - | Chr1:85124135-85124154 | MsG0180004977.01.T01:CDS | 35.0% |
| ACTTCGTAATTATGGCCATC+TGG | - | Chr1:85123740-85123759 | MsG0180004977.01.T01:CDS | 40.0% | |
| AGGAACGGTGACATACTTAA+GGG | + | Chr1:85123917-85123936 | None:intergenic | 40.0% | |
| ATTATTCCTGCCACGACAAT+AGG | + | Chr1:85123937-85123956 | None:intergenic | 40.0% | |
| CACTTATCTGTCAGCTGATT+GGG | - | Chr1:85123657-85123676 | MsG0180004977.01.T01:CDS | 40.0% | |
| CTTCGTAATTATGGCCATCT+GGG | - | Chr1:85123741-85123760 | MsG0180004977.01.T01:CDS | 40.0% | |
| GATAGTCAAGCTTTACGTGA+TGG | - | Chr1:85124189-85124208 | MsG0180004977.01.T01:CDS | 40.0% | |
| GATGGCCATAATTACGAAGT+TGG | + | Chr1:85123740-85123759 | None:intergenic | 40.0% | |
| TAGGAACGGTGACATACTTA+AGG | + | Chr1:85123918-85123937 | None:intergenic | 40.0% | |
| TCAAATATGGTGAGAGGACT+TGG | - | Chr1:85123956-85123975 | MsG0180004977.01.T01:CDS | 40.0% | |
| TCACGTAAAGCTTGACTATC+TGG | + | Chr1:85124189-85124208 | None:intergenic | 40.0% | |
| TCACTTATCTGTCAGCTGAT+TGG | - | Chr1:85123656-85123675 | MsG0180004977.01.T01:CDS | 40.0% | |
| TTGGTTGTCTTCAAGAGAGT+AGG | + | Chr1:85123812-85123831 | None:intergenic | 40.0% | |
| ! | TTGGTTCTCCCTTGAGTATT+AGG | + | Chr1:85124147-85124166 | None:intergenic | 40.0% |
| !!! | TCATCTTTTTGGGTAACCGA+AGG | - | Chr1:85123593-85123612 | MsG0180004977.01.T01:CDS | 40.0% |
| CCAAGATGCACAAGGAGAAA+TGG | + | Chr1:85123769-85123788 | None:intergenic | 45.0% | |
| CCATTTCTCCTTGTGCATCT+TGG | - | Chr1:85123766-85123785 | MsG0180004977.01.T01:CDS | 45.0% | |
| CTCTTGAAGACAACCAACTG+TGG | - | Chr1:85123815-85123834 | MsG0180004977.01.T01:CDS | 45.0% | |
| GGAAAGAATTCCCAGAGCAA+CGG | + | Chr1:85123689-85123708 | None:intergenic | 45.0% | |
| GGAACGGTGACATACTTAAG+GGG | + | Chr1:85123916-85123935 | None:intergenic | 45.0% | |
| GGTGACATACTTAAGGGGAT+TGG | + | Chr1:85123911-85123930 | None:intergenic | 45.0% | |
| TTTCTCCTTGTGCATCTTGG+TGG | - | Chr1:85123769-85123788 | MsG0180004977.01.T01:CDS | 45.0% | |
| AAGGAGAAATGGTGCCCAGA+TGG | + | Chr1:85123758-85123777 | None:intergenic | 50.0% | |
| GAGTAGGCAGTGATTGTGTC+AGG | + | Chr1:85123796-85123815 | None:intergenic | 50.0% | |
| TCCTGCCACGACAATAGGAA+CGG | + | Chr1:85123932-85123951 | None:intergenic | 50.0% | |
| TCTGAATCCATCGCTGCTTC+CGG | + | Chr1:85123992-85124011 | None:intergenic | 50.0% | |
| TGTCACCGTTCCTATTGTCG+TGG | - | Chr1:85123924-85123943 | MsG0180004977.01.T01:CDS | 50.0% | |
| ! | CTTTACGTGATGGCGCTGTA+TGG | - | Chr1:85124199-85124218 | MsG0180004977.01.T01:CDS | 50.0% |
| ACCGTTCCTATTGTCGTGGC+AGG | - | Chr1:85123928-85123947 | MsG0180004977.01.T01:CDS | 55.0% | |
| CAGGACCACCAAGATGCACA+AGG | + | Chr1:85123777-85123796 | None:intergenic | 55.0% | |
| GCATAGTTTGGTCCTGGGTC+TGG | + | Chr1:85124033-85124052 | None:intergenic | 55.0% | |
| GCATATGTCGTGGCCACAGT+TGG | + | Chr1:85123831-85123850 | None:intergenic | 55.0% | |
| TAGTTTGGTCCTGGGTCTGG+AGG | + | Chr1:85124030-85124049 | None:intergenic | 55.0% | |
| TGGGTTGCTACCGTTGCTCT+GGG | - | Chr1:85123676-85123695 | MsG0180004977.01.T01:CDS | 55.0% | |
| ! | GTGAGAGGACTTGGTCACTG+CGG | - | Chr1:85123965-85123984 | MsG0180004977.01.T01:CDS | 55.0% |
| ! | TTGGGTTGCTACCGTTGCTC+TGG | - | Chr1:85123675-85123694 | MsG0180004977.01.T01:CDS | 55.0% |
| ATTCTCCCTCCTCCAGACCC+AGG | - | Chr1:85124018-85124037 | MsG0180004977.01.T01:CDS | 60.0% | |
| TTGGTCCTGGGTCTGGAGGA+GGG | + | Chr1:85124026-85124045 | None:intergenic | 60.0% | |
| TTTGGTCCTGGGTCTGGAGG+AGG | + | Chr1:85124027-85124046 | None:intergenic | 60.0% | |
| ! | AGGACTTGGTCACTGCGGTC+CGG | - | Chr1:85123970-85123989 | MsG0180004977.01.T01:CDS | 60.0% |
| CTGCGGTCCGGAAGCAGCGA+TGG | - | Chr1:85123982-85124001 | MsG0180004977.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 85123586 | 85124242 | 85123586 | ID=MsG0180004977.01;Name=MsG0180004977.01 |
| Chr1 | mRNA | 85123586 | 85124242 | 85123586 | ID=MsG0180004977.01.T01;Parent=MsG0180004977.01;Name=MsG0180004977.01.T01;_AED=0.47;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|218 |
| Chr1 | exon | 85123586 | 85124242 | 85123586 | ID=MsG0180004977.01.T01:exon:9557;Parent=MsG0180004977.01.T01 |
| Chr1 | CDS | 85123586 | 85124242 | 85123586 | ID=MsG0180004977.01.T01:cds;Parent=MsG0180004977.01.T01 |
| Gene Sequence |
| Protein sequence |
