Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006479.01.T01 | XP_003593242.1 | 89.975 | 399 | 29 | 3 | 1 | 398 | 1 | 389 | 0 | 654 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006479.01.T01 | Q8LFY8 | 44.954 | 218 | 107 | 5 | 50 | 266 | 72 | 277 | 3.98E-45 | 164 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006479.01.T01 | G7IPM0 | 89.975 | 399 | 29 | 3 | 1 | 398 | 1 | 389 | 0.0 | 654 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048205.01 | MsG0280006479.01 | 0.822868 | 1.881418e-53 | 1.594163e-50 |
MsG0080048207.01 | MsG0280006479.01 | 0.808109 | 3.639945e-50 | 2.063232e-47 |
MsG0080048309.01 | MsG0280006479.01 | 0.950158 | 2.930393e-108 | 6.120313e-103 |
MsG0180000089.01 | MsG0280006479.01 | 0.815386 | 9.492712e-52 | 6.535440e-49 |
MsG0180000585.01 | MsG0280006479.01 | 0.822997 | 1.755471e-53 | 1.492869e-50 |
MsG0180000856.01 | MsG0280006479.01 | 0.808292 | 3.327664e-50 | 1.895413e-47 |
MsG0180001922.01 | MsG0280006479.01 | 0.833866 | 4.168629e-56 | 4.863078e-53 |
MsG0180005006.01 | MsG0280006479.01 | 0.802290 | 6.016727e-49 | 2.936307e-46 |
MsG0180005813.01 | MsG0280006479.01 | 0.809526 | 1.811595e-50 | 1.066131e-47 |
MsG0180006047.01 | MsG0280006479.01 | 0.831931 | 1.262110e-55 | 1.389893e-52 |
MsG0180006050.01 | MsG0280006479.01 | 0.808507 | 2.993635e-50 | 1.714784e-47 |
MsG0280006432.01 | MsG0280006479.01 | 0.808037 | 3.769934e-50 | 2.132867e-47 |
MsG0280006479.01 | MsG0280007272.01 | 0.816553 | 5.211183e-52 | 3.704046e-49 |
MsG0280006479.01 | MsG0280007549.01 | 0.803326 | 3.677781e-49 | 1.842755e-46 |
MsG0280006479.01 | MsG0280007585.01 | 0.821764 | 3.394212e-53 | 2.786841e-50 |
MsG0280006479.01 | MsG0280007948.01 | 0.805973 | 1.030583e-49 | 5.527898e-47 |
MsG0280006479.01 | MsG0280010416.01 | 0.801387 | 9.221353e-49 | 4.398141e-46 |
MsG0280006479.01 | MsG0280011191.01 | 0.802872 | 4.564216e-49 | 2.260668e-46 |
MsG0280006479.01 | MsG0380014561.01 | 0.804578 | 2.020095e-49 | 1.045312e-46 |
MsG0280006479.01 | MsG0380015931.01 | 0.832854 | 7.454639e-56 | 8.436001e-53 |
MsG0280006479.01 | MsG0380016473.01 | 0.802513 | 5.412973e-49 | 2.656550e-46 |
MsG0280006479.01 | MsG0380017403.01 | 0.802962 | 4.374113e-49 | 2.171404e-46 |
MsG0280006479.01 | MsG0480021134.01 | 0.813516 | 2.460486e-51 | 1.610223e-48 |
MsG0280006479.01 | MsG0480021204.01 | 0.842459 | 2.552565e-58 | 3.873239e-55 |
MsG0280006479.01 | MsG0480021240.01 | 0.828458 | 8.889759e-55 | 8.841632e-52 |
MsG0280006479.01 | MsG0480023554.01 | 0.804932 | 1.703995e-49 | 8.899045e-47 |
MsG0280006479.01 | MsG0580024205.01 | 0.806750 | 7.067853e-50 | 3.866990e-47 |
MsG0280006479.01 | MsG0580024770.01 | 0.812056 | 5.135985e-51 | 3.231873e-48 |
MsG0280006479.01 | MsG0580025497.01 | 0.800831 | 1.198482e-48 | 5.636329e-46 |
MsG0280006479.01 | MsG0580025907.01 | 0.807780 | 4.275455e-50 | 2.402669e-47 |
MsG0280006479.01 | MsG0580026068.01 | 0.846278 | 2.401066e-59 | 4.111189e-56 |
MsG0280006479.01 | MsG0580029658.01 | 0.820726 | 5.888988e-53 | 4.696921e-50 |
MsG0280006479.01 | MsG0580029758.01 | 0.812257 | 4.644381e-51 | 2.938706e-48 |
MsG0280006479.01 | MsG0680035737.01 | 0.810928 | 9.032240e-51 | 5.516544e-48 |
MsG0280006479.01 | MsG0780036854.01 | 0.825582 | 4.332705e-54 | 3.965391e-51 |
MsG0280006479.01 | MsG0780039741.01 | 0.801236 | 9.902305e-49 | 4.705064e-46 |
MsG0280006479.01 | MsG0780040742.01 | 0.820747 | 5.826514e-53 | 4.649734e-50 |
MsG0280006479.01 | MsG0880042329.01 | 0.813071 | 3.080776e-51 | 1.991816e-48 |
MsG0280006479.01 | MsG0880043001.01 | 0.813840 | 2.088192e-51 | 1.378577e-48 |
MsG0280006479.01 | MsG0880044039.01 | 0.808977 | 2.375710e-50 | 1.377734e-47 |
MsG0280006479.01 | MsG0880044546.01 | 0.822841 | 1.908760e-53 | 1.616096e-50 |
MsG0280006479.01 | MsG0880045106.01 | 0.827124 | 1.860115e-54 | 1.779295e-51 |
MsG0280006479.01 | MsG0880046329.01 | 0.829564 | 4.797130e-55 | 4.927566e-52 |
MsG0280006479.01 | MsG0880046396.01 | 0.811589 | 6.491432e-51 | 4.034113e-48 |
MsG0280006479.01 | MsG0880046404.01 | 0.823818 | 1.128379e-53 | 9.821457e-51 |
MsG0280006479.01 | MsG0880046733.01 | 0.800872 | 1.175289e-48 | 5.533206e-46 |
MsG0280006479.01 | MsG0880047497.01 | 0.810434 | 1.155106e-50 | 6.961742e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006479.01.T01 | MTR_2g009310 | 89.975 | 399 | 29 | 3 | 1 | 398 | 1 | 389 | 0.0 | 654 |
MsG0280006479.01.T01 | MTR_4g093830 | 46.366 | 399 | 160 | 15 | 3 | 392 | 1 | 354 | 2.29e-92 | 282 |
MsG0280006479.01.T01 | MTR_5g064890 | 38.869 | 283 | 139 | 9 | 32 | 299 | 21 | 284 | 2.51e-53 | 181 |
MsG0280006479.01.T01 | MTR_8g089880 | 35.496 | 262 | 142 | 5 | 44 | 282 | 11 | 268 | 3.64e-47 | 162 |
MsG0280006479.01.T01 | MTR_5g030010 | 35.366 | 328 | 172 | 13 | 68 | 382 | 60 | 360 | 1.41e-40 | 148 |
MsG0280006479.01.T01 | MTR_8g066780 | 32.024 | 331 | 178 | 12 | 68 | 390 | 60 | 351 | 1.18e-31 | 123 |
MsG0280006479.01.T01 | MTR_4g106680 | 33.520 | 179 | 102 | 3 | 39 | 209 | 8 | 177 | 8.05e-24 | 100 |
MsG0280006479.01.T01 | MTR_3g110190 | 36.232 | 138 | 71 | 2 | 69 | 206 | 14 | 134 | 1.15e-22 | 98.2 |
MsG0280006479.01.T01 | MTR_8g063660 | 36.054 | 147 | 86 | 2 | 63 | 209 | 1 | 139 | 3.06e-22 | 97.1 |
MsG0280006479.01.T01 | MTR_5g034790 | 33.333 | 165 | 102 | 2 | 42 | 206 | 28 | 184 | 9.53e-21 | 93.2 |
MsG0280006479.01.T01 | MTR_4g129420 | 33.333 | 219 | 112 | 8 | 35 | 236 | 14 | 215 | 9.63e-21 | 94.4 |
MsG0280006479.01.T01 | MTR_6g007737 | 35.032 | 157 | 81 | 3 | 62 | 212 | 66 | 207 | 2.97e-20 | 92.0 |
MsG0280006479.01.T01 | MTR_3g094000 | 40.625 | 96 | 55 | 1 | 128 | 221 | 81 | 176 | 4.95e-20 | 87.0 |
MsG0280006479.01.T01 | MTR_1g043410 | 34.503 | 171 | 90 | 6 | 46 | 209 | 13 | 168 | 5.61e-20 | 90.1 |
MsG0280006479.01.T01 | MTR_1g082550 | 31.553 | 206 | 109 | 6 | 51 | 243 | 26 | 212 | 8.47e-20 | 90.5 |
MsG0280006479.01.T01 | MTR_3g100400 | 41.525 | 118 | 60 | 1 | 138 | 255 | 130 | 238 | 1.07e-19 | 90.5 |
MsG0280006479.01.T01 | MTR_4g120270 | 48.101 | 79 | 39 | 1 | 138 | 216 | 80 | 156 | 1.23e-19 | 88.6 |
MsG0280006479.01.T01 | MTR_6g087150 | 44.086 | 93 | 50 | 1 | 135 | 225 | 90 | 182 | 2.04e-19 | 89.4 |
MsG0280006479.01.T01 | MTR_7g116220 | 33.333 | 186 | 100 | 5 | 63 | 234 | 3 | 178 | 2.91e-19 | 85.1 |
MsG0280006479.01.T01 | MTR_5g026720 | 49.367 | 79 | 35 | 2 | 142 | 215 | 66 | 144 | 5.11e-19 | 84.0 |
MsG0280006479.01.T01 | MTR_5g064980 | 45.882 | 85 | 43 | 1 | 138 | 219 | 108 | 192 | 8.59e-19 | 87.8 |
MsG0280006479.01.T01 | MTR_3g464780 | 42.975 | 121 | 58 | 3 | 126 | 235 | 90 | 210 | 1.08e-18 | 85.5 |
MsG0280006479.01.T01 | MTR_2g436100 | 31.220 | 205 | 119 | 5 | 52 | 253 | 18 | 203 | 1.74e-18 | 85.5 |
MsG0280006479.01.T01 | MTR_7g113800 | 50.000 | 82 | 32 | 2 | 138 | 213 | 91 | 169 | 3.18e-18 | 85.9 |
MsG0280006479.01.T01 | MTR_8g023400 | 29.744 | 195 | 114 | 5 | 67 | 261 | 30 | 201 | 3.71e-18 | 85.1 |
MsG0280006479.01.T01 | MTR_7g076250 | 28.079 | 203 | 119 | 5 | 68 | 267 | 12 | 190 | 6.08e-18 | 81.6 |
MsG0280006479.01.T01 | MTR_5g066250 | 45.833 | 72 | 39 | 0 | 138 | 209 | 134 | 205 | 7.42e-18 | 85.1 |
MsG0280006479.01.T01 | MTR_1g074190 | 45.122 | 82 | 39 | 1 | 134 | 209 | 95 | 176 | 8.26e-18 | 84.3 |
MsG0280006479.01.T01 | MTR_3g086730 | 34.722 | 144 | 75 | 5 | 148 | 284 | 62 | 193 | 1.85e-17 | 81.3 |
MsG0280006479.01.T01 | MTR_1g070140 | 27.551 | 294 | 168 | 12 | 46 | 317 | 26 | 296 | 2.08e-17 | 83.2 |
MsG0280006479.01.T01 | MTR_2g055790 | 44.000 | 75 | 39 | 1 | 138 | 212 | 77 | 148 | 2.48e-17 | 80.1 |
MsG0280006479.01.T01 | MTR_3g086700 | 36.066 | 122 | 66 | 4 | 163 | 284 | 74 | 183 | 4.32e-17 | 79.3 |
MsG0280006479.01.T01 | MTR_7g073200 | 49.275 | 69 | 35 | 0 | 138 | 206 | 81 | 149 | 5.87e-17 | 78.6 |
MsG0280006479.01.T01 | MTR_8g071815 | 59.615 | 52 | 21 | 0 | 164 | 215 | 90 | 141 | 7.44e-17 | 78.6 |
MsG0280006479.01.T01 | MTR_5g026730 | 55.357 | 56 | 25 | 0 | 160 | 215 | 90 | 145 | 7.50e-17 | 78.2 |
MsG0280006479.01.T01 | MTR_3g099650 | 40.659 | 91 | 51 | 1 | 135 | 222 | 104 | 194 | 1.01e-16 | 81.6 |
MsG0280006479.01.T01 | MTR_8g073120 | 44.595 | 74 | 37 | 2 | 138 | 208 | 70 | 142 | 1.01e-16 | 78.6 |
MsG0280006479.01.T01 | MTR_7g116210 | 51.429 | 70 | 33 | 1 | 138 | 207 | 10 | 78 | 1.67e-16 | 75.5 |
MsG0280006479.01.T01 | MTR_2g096350 | 33.333 | 108 | 65 | 2 | 139 | 239 | 108 | 215 | 2.04e-16 | 78.2 |
MsG0280006479.01.T01 | MTR_7g116200 | 51.429 | 70 | 33 | 1 | 138 | 207 | 68 | 136 | 2.74e-16 | 76.6 |
MsG0280006479.01.T01 | MTR_3g091620 | 48.611 | 72 | 37 | 0 | 136 | 207 | 99 | 170 | 2.98e-16 | 79.7 |
MsG0280006479.01.T01 | MTR_4g063070 | 40.260 | 77 | 44 | 1 | 138 | 212 | 308 | 384 | 6.96e-16 | 79.0 |
MsG0280006479.01.T01 | MTR_7g096690 | 42.169 | 83 | 44 | 1 | 134 | 212 | 66 | 148 | 1.07e-15 | 77.8 |
MsG0280006479.01.T01 | MTR_4g056590 | 41.096 | 73 | 40 | 1 | 138 | 210 | 100 | 169 | 1.35e-15 | 75.1 |
MsG0280006479.01.T01 | MTR_7g117540 | 46.479 | 71 | 37 | 1 | 139 | 209 | 77 | 146 | 1.81e-15 | 76.6 |
MsG0280006479.01.T01 | MTR_3g114500 | 52.727 | 55 | 26 | 0 | 155 | 209 | 62 | 116 | 2.67e-15 | 72.4 |
MsG0280006479.01.T01 | MTR_3g078470 | 42.857 | 77 | 42 | 1 | 133 | 207 | 71 | 147 | 4.29e-15 | 74.3 |
MsG0280006479.01.T01 | MTR_2g041200 | 61.702 | 47 | 18 | 0 | 163 | 209 | 108 | 154 | 4.41e-15 | 73.2 |
MsG0280006479.01.T01 | MTR_5g064990 | 29.048 | 210 | 102 | 6 | 48 | 253 | 48 | 214 | 4.94e-15 | 76.6 |
MsG0280006479.01.T01 | MTR_5g022920 | 59.574 | 47 | 19 | 0 | 160 | 206 | 185 | 231 | 5.26e-15 | 74.3 |
MsG0280006479.01.T01 | MTR_6g055030 | 30.818 | 159 | 80 | 4 | 53 | 207 | 37 | 169 | 6.64e-15 | 75.5 |
MsG0280006479.01.T01 | MTR_7g116180 | 47.945 | 73 | 35 | 1 | 138 | 207 | 67 | 139 | 7.03e-15 | 72.8 |
MsG0280006479.01.T01 | MTR_8g092960 | 62.222 | 45 | 17 | 0 | 162 | 206 | 128 | 172 | 7.09e-15 | 73.6 |
MsG0280006479.01.T01 | MTR_8g092840 | 62.222 | 45 | 17 | 0 | 162 | 206 | 138 | 182 | 8.65e-15 | 73.6 |
MsG0280006479.01.T01 | MTR_7g079290 | 38.462 | 91 | 50 | 2 | 138 | 224 | 125 | 213 | 9.37e-15 | 73.2 |
MsG0280006479.01.T01 | MTR_5g024730 | 57.778 | 45 | 19 | 0 | 162 | 206 | 103 | 147 | 1.02e-14 | 73.2 |
MsG0280006479.01.T01 | MTR_1g070425 | 47.945 | 73 | 35 | 1 | 138 | 207 | 68 | 140 | 1.08e-14 | 72.4 |
MsG0280006479.01.T01 | MTR_3g078450 | 39.175 | 97 | 52 | 3 | 113 | 207 | 56 | 147 | 1.14e-14 | 73.2 |
MsG0280006479.01.T01 | MTR_4g030070 | 28.767 | 146 | 84 | 3 | 137 | 267 | 84 | 224 | 1.46e-14 | 72.8 |
MsG0280006479.01.T01 | MTR_5g071930 | 64.583 | 48 | 17 | 0 | 163 | 210 | 88 | 135 | 1.60e-14 | 72.0 |
MsG0280006479.01.T01 | MTR_8g092970 | 60.000 | 45 | 18 | 0 | 162 | 206 | 129 | 173 | 1.82e-14 | 72.4 |
MsG0280006479.01.T01 | MTR_7g079280 | 39.726 | 73 | 42 | 1 | 136 | 206 | 78 | 150 | 2.05e-14 | 71.2 |
MsG0280006479.01.T01 | MTR_8g093010 | 42.857 | 84 | 37 | 2 | 162 | 236 | 132 | 213 | 2.10e-14 | 72.4 |
MsG0280006479.01.T01 | MTR_1g026070 | 45.902 | 61 | 31 | 1 | 155 | 215 | 62 | 120 | 2.32e-14 | 70.1 |
MsG0280006479.01.T01 | MTR_8g092990 | 60.000 | 45 | 18 | 0 | 162 | 206 | 139 | 183 | 2.53e-14 | 72.4 |
MsG0280006479.01.T01 | MTR_8g028465 | 43.662 | 71 | 38 | 1 | 136 | 206 | 88 | 156 | 2.63e-14 | 71.6 |
MsG0280006479.01.T01 | MTR_3g116000 | 49.091 | 55 | 28 | 0 | 156 | 210 | 96 | 150 | 2.97e-14 | 71.2 |
MsG0280006479.01.T01 | MTR_3g071300 | 40.278 | 72 | 43 | 0 | 157 | 228 | 99 | 170 | 3.60e-14 | 70.5 |
MsG0280006479.01.T01 | MTR_8g009190 | 45.833 | 72 | 36 | 1 | 142 | 210 | 80 | 151 | 3.94e-14 | 73.2 |
MsG0280006479.01.T01 | MTR_2g090950 | 54.902 | 51 | 23 | 0 | 163 | 213 | 122 | 172 | 4.48e-14 | 71.6 |
MsG0280006479.01.T01 | MTR_2g044570 | 50.877 | 57 | 28 | 0 | 153 | 209 | 72 | 128 | 4.85e-14 | 72.8 |
MsG0280006479.01.T01 | MTR_8g092985 | 57.778 | 45 | 19 | 0 | 162 | 206 | 136 | 180 | 5.06e-14 | 70.9 |
MsG0280006479.01.T01 | MTR_8g092930 | 57.778 | 45 | 19 | 0 | 162 | 206 | 137 | 181 | 5.54e-14 | 71.2 |
MsG0280006479.01.T01 | MTR_3g095560 | 55.102 | 49 | 22 | 0 | 162 | 210 | 134 | 182 | 5.94e-14 | 71.2 |
MsG0280006479.01.T01 | MTR_1g492830 | 31.544 | 149 | 71 | 5 | 69 | 209 | 8 | 133 | 6.00e-14 | 71.2 |
MsG0280006479.01.T01 | MTR_2g090905 | 55.319 | 47 | 21 | 0 | 163 | 209 | 70 | 116 | 6.27e-14 | 68.6 |
MsG0280006479.01.T01 | MTR_8g019710 | 54.902 | 51 | 23 | 0 | 159 | 209 | 49 | 99 | 7.05e-14 | 68.9 |
MsG0280006479.01.T01 | MTR_8g074900 | 57.778 | 45 | 19 | 0 | 162 | 206 | 178 | 222 | 7.59e-14 | 70.9 |
MsG0280006479.01.T01 | MTR_2g035800 | 37.234 | 94 | 55 | 1 | 126 | 215 | 60 | 153 | 1.29e-13 | 68.6 |
MsG0280006479.01.T01 | MTR_1g100737 | 48.077 | 52 | 27 | 0 | 156 | 207 | 115 | 166 | 1.47e-13 | 69.3 |
MsG0280006479.01.T01 | MTR_8g032690 | 42.466 | 73 | 40 | 1 | 164 | 234 | 19 | 91 | 2.44e-13 | 66.2 |
MsG0280006479.01.T01 | MTR_5g092750 | 53.061 | 49 | 23 | 0 | 164 | 212 | 185 | 233 | 2.61e-13 | 69.3 |
MsG0280006479.01.T01 | MTR_5g082940 | 38.889 | 72 | 42 | 1 | 138 | 207 | 75 | 146 | 4.28e-13 | 67.4 |
MsG0280006479.01.T01 | MTR_6g055030 | 64.286 | 42 | 15 | 0 | 166 | 207 | 97 | 138 | 7.53e-13 | 68.9 |
MsG0280006479.01.T01 | MTR_7g117350 | 30.380 | 158 | 81 | 5 | 55 | 206 | 222 | 356 | 1.09e-12 | 69.3 |
MsG0280006479.01.T01 | MTR_7g059360 | 48.333 | 60 | 31 | 0 | 161 | 220 | 155 | 214 | 1.09e-12 | 67.8 |
MsG0280006479.01.T01 | MTR_5g092790 | 54.348 | 46 | 21 | 0 | 164 | 209 | 185 | 230 | 1.16e-12 | 67.8 |
MsG0280006479.01.T01 | MTR_7g108855 | 39.726 | 73 | 42 | 1 | 139 | 209 | 67 | 139 | 4.26e-12 | 65.1 |
MsG0280006479.01.T01 | MTR_1g056350 | 46.154 | 52 | 28 | 0 | 162 | 213 | 101 | 152 | 5.31e-12 | 64.3 |
MsG0280006479.01.T01 | MTR_3g078520 | 43.548 | 62 | 32 | 1 | 146 | 207 | 88 | 146 | 6.13e-12 | 63.9 |
MsG0280006479.01.T01 | MTR_5g076990 | 52.941 | 51 | 24 | 0 | 163 | 213 | 105 | 155 | 1.24e-11 | 65.5 |
MsG0280006479.01.T01 | MTR_4g094725 | 55.814 | 43 | 19 | 0 | 164 | 206 | 106 | 148 | 2.06e-11 | 62.0 |
MsG0280006479.01.T01 | MTR_7g117350 | 29.605 | 152 | 78 | 5 | 61 | 206 | 236 | 364 | 4.13e-11 | 64.3 |
MsG0280006479.01.T01 | MTR_8g099495 | 33.333 | 108 | 62 | 4 | 126 | 231 | 309 | 408 | 5.12e-11 | 64.3 |
MsG0280006479.01.T01 | MTR_4g022410 | 42.647 | 68 | 38 | 1 | 146 | 212 | 94 | 161 | 5.24e-11 | 62.0 |
MsG0280006479.01.T01 | MTR_3g012550 | 25.568 | 176 | 107 | 6 | 52 | 220 | 6 | 164 | 5.58e-11 | 61.6 |
MsG0280006479.01.T01 | MTR_8g066740 | 55.556 | 45 | 20 | 0 | 163 | 207 | 105 | 149 | 6.26e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006479.01.T01 | AT1G72220 | 44.954 | 218 | 107 | 5 | 50 | 266 | 72 | 277 | 4.06e-46 | 164 |
MsG0280006479.01.T01 | AT4G33565 | 48.000 | 175 | 63 | 4 | 126 | 300 | 179 | 325 | 2.79e-43 | 155 |
MsG0280006479.01.T01 | AT5G10380 | 70.732 | 82 | 24 | 0 | 129 | 210 | 100 | 181 | 3.74e-38 | 139 |
MsG0280006479.01.T01 | AT5G17600 | 38.247 | 251 | 134 | 8 | 138 | 375 | 116 | 358 | 1.29e-37 | 139 |
MsG0280006479.01.T01 | AT3G03550 | 36.260 | 262 | 131 | 8 | 25 | 273 | 16 | 254 | 4.32e-36 | 135 |
MsG0280006479.01.T01 | AT4G17905 | 31.359 | 287 | 150 | 10 | 21 | 283 | 17 | 280 | 3.32e-27 | 110 |
MsG0280006479.01.T01 | AT4G17905 | 31.359 | 287 | 150 | 10 | 21 | 283 | 43 | 306 | 3.83e-27 | 110 |
MsG0280006479.01.T01 | AT1G23980 | 35.333 | 150 | 91 | 2 | 60 | 209 | 46 | 189 | 3.99e-26 | 108 |
MsG0280006479.01.T01 | AT2G20030 | 32.544 | 169 | 87 | 4 | 44 | 206 | 19 | 166 | 4.06e-21 | 94.7 |
MsG0280006479.01.T01 | AT3G48030 | 35.000 | 140 | 81 | 2 | 68 | 206 | 41 | 171 | 4.36e-21 | 92.4 |
MsG0280006479.01.T01 | AT3G48030 | 35.000 | 140 | 81 | 2 | 68 | 206 | 119 | 249 | 1.15e-20 | 92.8 |
MsG0280006479.01.T01 | AT1G72200 | 47.475 | 99 | 48 | 2 | 138 | 233 | 115 | 212 | 7.08e-20 | 91.3 |
MsG0280006479.01.T01 | AT2G18650 | 52.632 | 76 | 35 | 1 | 138 | 212 | 99 | 174 | 3.66e-19 | 89.4 |
MsG0280006479.01.T01 | AT5G05810 | 52.174 | 69 | 33 | 0 | 138 | 206 | 120 | 188 | 4.35e-19 | 89.0 |
MsG0280006479.01.T01 | AT5G01880 | 46.575 | 73 | 39 | 0 | 138 | 210 | 79 | 151 | 8.88e-19 | 83.2 |
MsG0280006479.01.T01 | AT5G40250 | 32.121 | 165 | 81 | 4 | 61 | 209 | 39 | 188 | 1.37e-18 | 87.0 |
MsG0280006479.01.T01 | AT2G47560 | 53.247 | 77 | 34 | 1 | 135 | 209 | 77 | 153 | 1.53e-18 | 84.3 |
MsG0280006479.01.T01 | AT4G28890 | 50.000 | 72 | 36 | 0 | 135 | 206 | 94 | 165 | 1.59e-18 | 87.4 |
MsG0280006479.01.T01 | AT3G62690 | 48.864 | 88 | 41 | 2 | 139 | 224 | 88 | 173 | 1.77e-18 | 84.7 |
MsG0280006479.01.T01 | AT5G57750 | 33.557 | 149 | 78 | 4 | 63 | 206 | 32 | 164 | 2.13e-18 | 83.6 |
MsG0280006479.01.T01 | AT3G10910 | 30.128 | 156 | 92 | 2 | 51 | 206 | 18 | 156 | 3.01e-18 | 82.4 |
MsG0280006479.01.T01 | AT4G30400 | 50.649 | 77 | 37 | 1 | 131 | 206 | 100 | 176 | 3.08e-18 | 86.7 |
MsG0280006479.01.T01 | AT1G22500 | 51.899 | 79 | 35 | 1 | 138 | 213 | 89 | 167 | 3.95e-18 | 85.9 |
MsG0280006479.01.T01 | AT4G10150 | 25.984 | 254 | 146 | 6 | 38 | 285 | 7 | 224 | 4.08e-18 | 83.6 |
MsG0280006479.01.T01 | AT5G43420 | 28.085 | 235 | 119 | 7 | 134 | 320 | 94 | 326 | 4.10e-18 | 85.5 |
MsG0280006479.01.T01 | AT1G04360 | 35.220 | 159 | 61 | 5 | 68 | 209 | 46 | 179 | 5.23e-18 | 85.5 |
MsG0280006479.01.T01 | AT1G35330 | 48.101 | 79 | 38 | 1 | 138 | 213 | 100 | 178 | 5.71e-18 | 84.7 |
MsG0280006479.01.T01 | AT3G16720 | 35.766 | 137 | 69 | 4 | 134 | 259 | 90 | 218 | 1.30e-17 | 83.2 |
MsG0280006479.01.T01 | AT3G05200 | 42.105 | 114 | 50 | 4 | 138 | 245 | 99 | 202 | 1.31e-17 | 84.3 |
MsG0280006479.01.T01 | AT2G34990 | 30.323 | 155 | 87 | 4 | 62 | 213 | 9 | 145 | 2.16e-17 | 82.4 |
MsG0280006479.01.T01 | AT2G34990 | 30.323 | 155 | 87 | 4 | 62 | 213 | 31 | 167 | 2.20e-17 | 82.8 |
MsG0280006479.01.T01 | AT2G35000 | 32.778 | 180 | 90 | 6 | 64 | 234 | 48 | 205 | 2.48e-17 | 83.2 |
MsG0280006479.01.T01 | AT4G15975 | 32.353 | 136 | 72 | 3 | 138 | 254 | 51 | 185 | 7.18e-17 | 79.7 |
MsG0280006479.01.T01 | AT5G05280 | 44.304 | 79 | 43 | 1 | 138 | 216 | 88 | 165 | 7.72e-17 | 78.2 |
MsG0280006479.01.T01 | AT4G40070 | 31.481 | 162 | 82 | 4 | 49 | 207 | 32 | 167 | 9.36e-17 | 80.9 |
MsG0280006479.01.T01 | AT4G10160 | 37.069 | 116 | 58 | 4 | 137 | 252 | 71 | 171 | 9.67e-17 | 79.3 |
MsG0280006479.01.T01 | AT3G18930 | 45.455 | 88 | 38 | 2 | 138 | 215 | 120 | 207 | 2.14e-16 | 80.9 |
MsG0280006479.01.T01 | AT3G18930 | 45.455 | 88 | 38 | 2 | 138 | 215 | 120 | 207 | 2.14e-16 | 80.9 |
MsG0280006479.01.T01 | AT3G18930 | 45.455 | 88 | 38 | 2 | 138 | 215 | 120 | 207 | 2.14e-16 | 80.9 |
MsG0280006479.01.T01 | AT5G66070 | 36.434 | 129 | 72 | 3 | 78 | 206 | 100 | 218 | 3.50e-16 | 77.4 |
MsG0280006479.01.T01 | AT5G66070 | 36.434 | 129 | 72 | 3 | 78 | 206 | 100 | 218 | 3.50e-16 | 77.4 |
MsG0280006479.01.T01 | AT4G09120 | 45.570 | 79 | 40 | 1 | 138 | 213 | 94 | 172 | 5.24e-16 | 79.0 |
MsG0280006479.01.T01 | AT4G09100 | 43.421 | 76 | 40 | 1 | 138 | 210 | 56 | 131 | 6.43e-16 | 74.3 |
MsG0280006479.01.T01 | AT5G66070 | 41.837 | 98 | 50 | 3 | 110 | 206 | 151 | 242 | 9.27e-16 | 76.6 |
MsG0280006479.01.T01 | AT2G42350 | 55.102 | 49 | 22 | 0 | 159 | 207 | 95 | 143 | 2.84e-15 | 74.7 |
MsG0280006479.01.T01 | AT4G09110 | 41.772 | 79 | 43 | 1 | 138 | 213 | 94 | 172 | 3.37e-15 | 76.3 |
MsG0280006479.01.T01 | AT5G27420 | 55.172 | 58 | 23 | 1 | 149 | 206 | 112 | 166 | 3.74e-15 | 76.6 |
MsG0280006479.01.T01 | AT1G49230 | 46.154 | 78 | 32 | 2 | 162 | 239 | 129 | 196 | 4.00e-15 | 74.3 |
MsG0280006479.01.T01 | AT2G17730 | 63.043 | 46 | 17 | 0 | 164 | 209 | 196 | 241 | 4.45e-15 | 74.7 |
MsG0280006479.01.T01 | AT1G72310 | 43.836 | 73 | 40 | 1 | 152 | 224 | 115 | 186 | 4.70e-15 | 75.9 |
MsG0280006479.01.T01 | AT1G53820 | 38.158 | 76 | 46 | 1 | 134 | 209 | 91 | 165 | 7.75e-15 | 75.1 |
MsG0280006479.01.T01 | AT4G17920 | 30.864 | 162 | 94 | 4 | 48 | 206 | 6 | 152 | 9.62e-15 | 74.7 |
MsG0280006479.01.T01 | AT1G49210 | 45.946 | 74 | 39 | 1 | 138 | 210 | 108 | 181 | 1.02e-14 | 73.6 |
MsG0280006479.01.T01 | AT4G35840 | 65.116 | 43 | 15 | 0 | 164 | 206 | 191 | 233 | 1.05e-14 | 73.6 |
MsG0280006479.01.T01 | AT1G49200 | 56.000 | 50 | 22 | 0 | 161 | 210 | 133 | 182 | 1.31e-14 | 73.2 |
MsG0280006479.01.T01 | AT1G20823 | 55.102 | 49 | 22 | 0 | 162 | 210 | 109 | 157 | 2.00e-14 | 72.0 |
MsG0280006479.01.T01 | AT3G18773 | 37.383 | 107 | 62 | 3 | 138 | 243 | 103 | 205 | 2.01e-14 | 72.4 |
MsG0280006479.01.T01 | AT3G60220 | 45.070 | 71 | 36 | 1 | 142 | 209 | 92 | 162 | 2.01e-14 | 74.3 |
MsG0280006479.01.T01 | AT2G27940 | 37.805 | 82 | 48 | 2 | 126 | 207 | 105 | 183 | 2.04e-14 | 72.8 |
MsG0280006479.01.T01 | AT2G42360 | 28.387 | 155 | 87 | 4 | 61 | 213 | 25 | 157 | 2.30e-14 | 72.8 |
MsG0280006479.01.T01 | AT1G76410 | 43.243 | 74 | 41 | 1 | 138 | 210 | 77 | 150 | 2.47e-14 | 71.2 |
MsG0280006479.01.T01 | AT1G28040 | 32.867 | 143 | 74 | 6 | 67 | 206 | 172 | 295 | 4.22e-14 | 72.8 |
MsG0280006479.01.T01 | AT3G61550 | 31.737 | 167 | 79 | 6 | 67 | 206 | 20 | 178 | 5.71e-14 | 70.9 |
MsG0280006479.01.T01 | AT2G46494 | 30.986 | 142 | 74 | 3 | 68 | 206 | 238 | 358 | 7.35e-14 | 72.8 |
MsG0280006479.01.T01 | AT2G46493 | 35.644 | 101 | 57 | 3 | 112 | 206 | 82 | 180 | 9.37e-14 | 69.7 |
MsG0280006479.01.T01 | AT2G25410 | 37.113 | 97 | 54 | 2 | 124 | 217 | 284 | 376 | 9.80e-14 | 72.4 |
MsG0280006479.01.T01 | AT2G46160 | 29.252 | 147 | 70 | 4 | 87 | 214 | 57 | 188 | 1.10e-13 | 70.1 |
MsG0280006479.01.T01 | AT2G46160 | 29.252 | 147 | 70 | 4 | 87 | 214 | 57 | 188 | 1.10e-13 | 70.1 |
MsG0280006479.01.T01 | AT4G09130 | 44.737 | 76 | 33 | 2 | 138 | 207 | 91 | 163 | 1.16e-13 | 72.0 |
MsG0280006479.01.T01 | AT2G35420 | 35.484 | 93 | 55 | 2 | 138 | 227 | 77 | 167 | 1.18e-13 | 70.9 |
MsG0280006479.01.T01 | AT2G35910 | 35.484 | 93 | 57 | 1 | 138 | 227 | 121 | 213 | 1.26e-13 | 70.1 |
MsG0280006479.01.T01 | AT1G33480 | 36.486 | 74 | 46 | 1 | 137 | 210 | 74 | 146 | 1.77e-13 | 70.5 |
MsG0280006479.01.T01 | AT4G35480 | 57.778 | 45 | 19 | 0 | 162 | 206 | 111 | 155 | 1.82e-13 | 69.3 |
MsG0280006479.01.T01 | AT1G49220 | 61.364 | 44 | 17 | 0 | 163 | 206 | 134 | 177 | 2.49e-13 | 69.7 |
MsG0280006479.01.T01 | AT2G37580 | 39.759 | 83 | 49 | 1 | 128 | 209 | 105 | 187 | 2.77e-13 | 69.3 |
MsG0280006479.01.T01 | AT5G42200 | 52.941 | 51 | 24 | 0 | 162 | 212 | 102 | 152 | 5.94e-13 | 67.0 |
MsG0280006479.01.T01 | AT2G46495 | 38.043 | 92 | 50 | 2 | 129 | 217 | 254 | 341 | 1.31e-12 | 68.9 |
MsG0280006479.01.T01 | AT5G58580 | 31.098 | 164 | 103 | 6 | 138 | 295 | 111 | 270 | 1.43e-12 | 68.6 |
MsG0280006479.01.T01 | AT2G46495 | 39.080 | 87 | 46 | 2 | 134 | 217 | 287 | 369 | 1.54e-12 | 68.9 |
MsG0280006479.01.T01 | AT2G17450 | 50.000 | 54 | 25 | 1 | 155 | 206 | 91 | 144 | 1.95e-12 | 65.9 |
MsG0280006479.01.T01 | AT3G19140 | 38.462 | 78 | 47 | 1 | 129 | 206 | 45 | 121 | 3.17e-12 | 64.3 |
MsG0280006479.01.T01 | AT5G47610 | 48.000 | 50 | 26 | 0 | 163 | 212 | 106 | 155 | 4.58e-12 | 64.3 |
MsG0280006479.01.T01 | AT3G14320 | 54.545 | 44 | 20 | 0 | 163 | 206 | 87 | 130 | 1.11e-11 | 64.3 |
MsG0280006479.01.T01 | AT1G32361 | 40.845 | 71 | 38 | 2 | 137 | 206 | 129 | 196 | 1.42e-11 | 65.5 |
MsG0280006479.01.T01 | AT5G07040 | 41.270 | 63 | 33 | 1 | 164 | 226 | 94 | 152 | 1.55e-11 | 62.8 |
MsG0280006479.01.T01 | AT1G74410 | 47.917 | 48 | 25 | 0 | 162 | 209 | 174 | 221 | 1.72e-11 | 63.9 |
MsG0280006479.01.T01 | AT5G46650 | 33.600 | 125 | 75 | 3 | 138 | 254 | 85 | 209 | 1.92e-11 | 64.7 |
MsG0280006479.01.T01 | AT5G06490 | 29.915 | 117 | 65 | 3 | 109 | 218 | 77 | 183 | 2.07e-11 | 63.2 |
MsG0280006479.01.T01 | AT1G53010 | 40.260 | 77 | 37 | 2 | 138 | 206 | 97 | 172 | 2.20e-11 | 62.8 |
MsG0280006479.01.T01 | AT3G60966 | 54.000 | 50 | 23 | 0 | 164 | 213 | 62 | 111 | 2.90e-11 | 61.2 |
MsG0280006479.01.T01 | AT4G35840 | 61.538 | 39 | 15 | 0 | 168 | 206 | 227 | 265 | 2.93e-11 | 63.9 |
MsG0280006479.01.T01 | AT5G53110 | 29.710 | 138 | 72 | 5 | 72 | 206 | 257 | 372 | 3.21e-11 | 64.7 |
MsG0280006479.01.T01 | AT4G17245 | 43.056 | 72 | 39 | 2 | 152 | 221 | 89 | 160 | 6.22e-11 | 61.2 |
Find 68 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAATTGAGTCTAATATTAT+TGG | 0.171503 | 2:+2550225 | MsG0280006479.01.T01:CDS |
GGTGAAAGTGAAACCAATTT+AGG | 0.183802 | 2:+2550021 | MsG0280006479.01.T01:CDS |
ACTATCTTCAAACCCTAAAT+TGG | 0.190275 | 2:-2550034 | None:intergenic |
GTGCAATTTATATCAGTTTC+AGG | 0.221190 | 2:+2549530 | MsG0280006479.01.T01:CDS |
AGTTGCTAGGGTTGAGTCTT+TGG | 0.245207 | 2:+2549921 | MsG0280006479.01.T01:CDS |
GGTGATGGAGGATAGTAATA+AGG | 0.264267 | 2:-2549406 | None:intergenic |
GGTTAATGGAAATGAGAATT+TGG | 0.267606 | 2:+2550290 | MsG0280006479.01.T01:CDS |
TGATTCTGAATTGAGGAATA+TGG | 0.277924 | 2:+2550062 | MsG0280006479.01.T01:CDS |
GATGCTATTTCAAAGGTTAA+TGG | 0.289608 | 2:+2550276 | MsG0280006479.01.T01:CDS |
CTGTGGTGGATCATCCTATT+TGG | 0.300381 | 2:+2549653 | MsG0280006479.01.T01:CDS |
GTGAAAGTGAAACCAATTTA+GGG | 0.330008 | 2:+2550022 | MsG0280006479.01.T01:CDS |
AGAAAAGCTACTACTTCCTT+TGG | 0.346806 | 2:-2550322 | None:intergenic |
TAGGCCAACAAGATATTTGC+AGG | 0.357718 | 2:+2550347 | MsG0280006479.01.T01:CDS |
TACGAACTTGACCTCTTCAT+TGG | 0.358700 | 2:-2550381 | None:intergenic |
GCCTAGGAGATCTGTTTCTA+TGG | 0.359627 | 2:+2550155 | MsG0280006479.01.T01:CDS |
TGATTCTAGTTCAAGTTCAT+TGG | 0.360919 | 2:+2549963 | MsG0280006479.01.T01:CDS |
TGGTCTTGTTGTTGTGATGA+TGG | 0.389006 | 2:-2549436 | None:intergenic |
ATTTGGTATATTCGAACCTT+AGG | 0.393202 | 2:+2549670 | MsG0280006479.01.T01:CDS |
ATTTACCTTGTATTGATACT+TGG | 0.395348 | 2:+2549842 | MsG0280006479.01.T01:CDS |
GAAGAAGAAGAAGCAGCTTA+AGG | 0.398449 | 2:+2549557 | MsG0280006479.01.T01:CDS |
GATGATGGTGGTGGTGGTGA+TGG | 0.398518 | 2:-2549421 | None:intergenic |
ACTGTAGGGTTATTAACAAT+TGG | 0.403000 | 2:-2549901 | None:intergenic |
CAACAGCTCAACAAAATGAT+AGG | 0.414938 | 2:+2549593 | MsG0280006479.01.T01:CDS |
ATTGCATCATAGAAAATTGA+TGG | 0.419713 | 2:+2549291 | MsG0280006479.01.T01:CDS |
AGAGGTGAAGGTTTGATTGA+AGG | 0.419735 | 2:+2549739 | MsG0280006479.01.T01:CDS |
ATGGGAAATTTCTTCTGTCT+TGG | 0.420117 | 2:+2550406 | MsG0280006479.01.T01:CDS |
CTTGTATTGATACTTGGCTT+AGG | 0.434318 | 2:+2549848 | MsG0280006479.01.T01:CDS |
CGGTTAGTGTCGTTCGGCCT+AGG | 0.439561 | 2:+2550139 | MsG0280006479.01.T01:CDS |
AAGAAGAAGAAGCAGCTTAA+GGG | 0.441987 | 2:+2549558 | MsG0280006479.01.T01:CDS |
AAGGTTCGAATATACCAAAT+AGG | 0.442246 | 2:-2549667 | None:intergenic |
GTGATGGAGGATAGTAATAA+GGG | 0.446938 | 2:-2549405 | None:intergenic |
AAGTTTCTGAAAATATCATT+TGG | 0.455151 | 2:-2550450 | None:intergenic |
AGAGGTCAAGTTCGTACAAT+GGG | 0.473529 | 2:+2550388 | MsG0280006479.01.T01:CDS |
AGGAATATGGAAGAAAATGA+AGG | 0.480759 | 2:+2550075 | MsG0280006479.01.T01:CDS |
TGTAAGTATAAGAGAGGTGA+AGG | 0.482072 | 2:+2549727 | MsG0280006479.01.T01:CDS |
TGTTGTGATGATGGTGGTGG+TGG | 0.484989 | 2:-2549427 | None:intergenic |
GGATAGTAATAAGGGATTTG+TGG | 0.485017 | 2:-2549397 | None:intergenic |
TTAATAACCCTACAGTTGCT+AGG | 0.487636 | 2:+2549908 | MsG0280006479.01.T01:CDS |
ACACCCTGCAAATATCTTGT+TGG | 0.493613 | 2:-2550351 | None:intergenic |
CAATGATGATGCTATTTCAA+AGG | 0.497440 | 2:+2550269 | MsG0280006479.01.T01:CDS |
TTGAGGTATGTGAAAATGAA+AGG | 0.499251 | 2:+2550103 | MsG0280006479.01.T01:CDS |
ATACTAATTGTCCTATGTGT+AGG | 0.501670 | 2:+2549875 | MsG0280006479.01.T01:CDS |
GATGGTGGTGGTGGTGATGG+AGG | 0.507673 | 2:-2549418 | None:intergenic |
TCGATGCGGTTAGTGTCGTT+CGG | 0.509630 | 2:+2550133 | MsG0280006479.01.T01:CDS |
TACTAATTGTCCTATGTGTA+GGG | 0.520232 | 2:+2549876 | MsG0280006479.01.T01:CDS |
TAATAACCCTACAGTTGCTA+GGG | 0.525677 | 2:+2549909 | MsG0280006479.01.T01:CDS |
AGTGTTTGTAAGTATAAGAG+AGG | 0.532026 | 2:+2549721 | MsG0280006479.01.T01:CDS |
TGAAAAGCATGATGACACTT+AGG | 0.532713 | 2:-2549820 | None:intergenic |
TGTTGTTGTGATGATGGTGG+TGG | 0.537470 | 2:-2549430 | None:intergenic |
CTTGACCTCTTCATTGGACT+AGG | 0.544954 | 2:-2550375 | None:intergenic |
GATGTTTCTGATGAAAATAG+TGG | 0.564866 | 2:+2550000 | MsG0280006479.01.T01:CDS |
CTAAGCCAAGTATCAATACA+AGG | 0.569710 | 2:-2549847 | None:intergenic |
GACTCAACCCTAGCAACTGT+AGG | 0.588401 | 2:-2549916 | None:intergenic |
GGAATATGGAAGAAAATGAA+GGG | 0.590398 | 2:+2550076 | MsG0280006479.01.T01:CDS |
AACAGATTGATGAAGACCTA+AGG | 0.594317 | 2:-2549686 | None:intergenic |
AATTTGGCAACTACTTCCAA+AGG | 0.595349 | 2:+2550306 | MsG0280006479.01.T01:CDS |
TCCATAGAAACAGATCTCCT+AGG | 0.599299 | 2:-2550156 | None:intergenic |
AAGAGGTCAAGTTCGTACAA+TGG | 0.601002 | 2:+2550387 | MsG0280006479.01.T01:CDS |
GCATCAACATGGATCTGTGG+TGG | 0.608189 | 2:+2549639 | MsG0280006479.01.T01:CDS |
ACTCAACCCTAGCAACTGTA+GGG | 0.614286 | 2:-2549915 | None:intergenic |
ACAATTGGAGCCCTACACAT+AGG | 0.622227 | 2:-2549886 | None:intergenic |
TCTTGTTGTTGTGATGATGG+TGG | 0.622792 | 2:-2549433 | None:intergenic |
AGGCCAACAAGATATTTGCA+GGG | 0.633418 | 2:+2550348 | MsG0280006479.01.T01:CDS |
GAAGAACAACAGCATCAACA+TGG | 0.634184 | 2:+2549628 | MsG0280006479.01.T01:CDS |
GTGTTCCTAGTCCAATGAAG+AGG | 0.650481 | 2:+2550370 | MsG0280006479.01.T01:CDS |
ACAGCATCAACATGGATCTG+TGG | 0.662494 | 2:+2549636 | MsG0280006479.01.T01:CDS |
AAGCAAGAAGAGAAAGCGTG+AGG | 0.681564 | 2:-2549483 | None:intergenic |
TGAAAGGCAAGTTGTCGATG+CGG | 0.682963 | 2:+2550119 | MsG0280006479.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAATTGAGTCTAATATTAT+TGG | + | Chr2:2550225-2550244 | MsG0280006479.01.T01:CDS | 20.0% |
!!! | AAGTTTCTGAAAATATCATT+TGG | - | Chr2:2550453-2550472 | None:intergenic | 20.0% |
! | ATTGCATCATAGAAAATTGA+TGG | + | Chr2:2549291-2549310 | MsG0280006479.01.T01:CDS | 25.0% |
!! | ATTTACCTTGTATTGATACT+TGG | + | Chr2:2549842-2549861 | MsG0280006479.01.T01:CDS | 25.0% |
!!! | TGAAGTAATTGTTGATTTTG+TGG | - | Chr2:2549462-2549481 | None:intergenic | 25.0% |
AAGGTTCGAATATACCAAAT+AGG | - | Chr2:2549670-2549689 | None:intergenic | 30.0% | |
ACTATCTTCAAACCCTAAAT+TGG | - | Chr2:2550037-2550056 | None:intergenic | 30.0% | |
ACTGTAGGGTTATTAACAAT+TGG | - | Chr2:2549904-2549923 | None:intergenic | 30.0% | |
AGGAATATGGAAGAAAATGA+AGG | + | Chr2:2550075-2550094 | MsG0280006479.01.T01:CDS | 30.0% | |
AGTGTTTGTAAGTATAAGAG+AGG | + | Chr2:2549721-2549740 | MsG0280006479.01.T01:CDS | 30.0% | |
ATACTAATTGTCCTATGTGT+AGG | + | Chr2:2549875-2549894 | MsG0280006479.01.T01:CDS | 30.0% | |
ATTTGGTATATTCGAACCTT+AGG | + | Chr2:2549670-2549689 | MsG0280006479.01.T01:CDS | 30.0% | |
GGAATATGGAAGAAAATGAA+GGG | + | Chr2:2550076-2550095 | MsG0280006479.01.T01:CDS | 30.0% | |
GGTTAATGGAAATGAGAATT+TGG | + | Chr2:2550290-2550309 | MsG0280006479.01.T01:CDS | 30.0% | |
GTGAAAGTGAAACCAATTTA+GGG | + | Chr2:2550022-2550041 | MsG0280006479.01.T01:CDS | 30.0% | |
GTGCAATTTATATCAGTTTC+AGG | + | Chr2:2549530-2549549 | MsG0280006479.01.T01:CDS | 30.0% | |
TACTAATTGTCCTATGTGTA+GGG | + | Chr2:2549876-2549895 | MsG0280006479.01.T01:CDS | 30.0% | |
TGATTCTGAATTGAGGAATA+TGG | + | Chr2:2550062-2550081 | MsG0280006479.01.T01:CDS | 30.0% | |
TTGAGGTATGTGAAAATGAA+AGG | + | Chr2:2550103-2550122 | MsG0280006479.01.T01:CDS | 30.0% | |
! | GAAGTAGTAGCTTTTCTTTT+AGG | + | Chr2:2550328-2550347 | MsG0280006479.01.T01:CDS | 30.0% |
! | GATGTTTCTGATGAAAATAG+TGG | + | Chr2:2550000-2550019 | MsG0280006479.01.T01:CDS | 30.0% |
!! | CAATGATGATGCTATTTCAA+AGG | + | Chr2:2550269-2550288 | MsG0280006479.01.T01:CDS | 30.0% |
!! | GATGCTATTTCAAAGGTTAA+TGG | + | Chr2:2550276-2550295 | MsG0280006479.01.T01:CDS | 30.0% |
!! | GTGTTTTTGATTCTGAATTG+AGG | + | Chr2:2550055-2550074 | MsG0280006479.01.T01:CDS | 30.0% |
!! | TGATTCTAGTTCAAGTTCAT+TGG | + | Chr2:2549963-2549982 | MsG0280006479.01.T01:CDS | 30.0% |
!!! | AGTAATTGTTGATTTTGTGG+TGG | - | Chr2:2549459-2549478 | None:intergenic | 30.0% |
AACAGATTGATGAAGACCTA+AGG | - | Chr2:2549689-2549708 | None:intergenic | 35.0% | |
AAGAAGAAGAAGCAGCTTAA+GGG | + | Chr2:2549558-2549577 | MsG0280006479.01.T01:CDS | 35.0% | |
AATTTGGCAACTACTTCCAA+AGG | + | Chr2:2550306-2550325 | MsG0280006479.01.T01:CDS | 35.0% | |
AGAAAAGCTACTACTTCCTT+TGG | - | Chr2:2550325-2550344 | None:intergenic | 35.0% | |
ATGGGAAATTTCTTCTGTCT+TGG | + | Chr2:2550406-2550425 | MsG0280006479.01.T01:CDS | 35.0% | |
CAACAGCTCAACAAAATGAT+AGG | + | Chr2:2549593-2549612 | MsG0280006479.01.T01:CDS | 35.0% | |
CTAAGCCAAGTATCAATACA+AGG | - | Chr2:2549850-2549869 | None:intergenic | 35.0% | |
GGATAGTAATAAGGGATTTG+TGG | - | Chr2:2549400-2549419 | None:intergenic | 35.0% | |
GGTGAAAGTGAAACCAATTT+AGG | + | Chr2:2550021-2550040 | MsG0280006479.01.T01:CDS | 35.0% | |
TAATAACCCTACAGTTGCTA+GGG | + | Chr2:2549909-2549928 | MsG0280006479.01.T01:CDS | 35.0% | |
TGTAAGTATAAGAGAGGTGA+AGG | + | Chr2:2549727-2549746 | MsG0280006479.01.T01:CDS | 35.0% | |
TTAATAACCCTACAGTTGCT+AGG | + | Chr2:2549908-2549927 | MsG0280006479.01.T01:CDS | 35.0% | |
! | CTTGTATTGATACTTGGCTT+AGG | + | Chr2:2549848-2549867 | MsG0280006479.01.T01:CDS | 35.0% |
! | GTGATGGAGGATAGTAATAA+GGG | - | Chr2:2549408-2549427 | None:intergenic | 35.0% |
! | TGAAAAGCATGATGACACTT+AGG | - | Chr2:2549823-2549842 | None:intergenic | 35.0% |
!! | TTTTGTTGAGCTGTTGATGA+TGG | - | Chr2:2549589-2549608 | None:intergenic | 35.0% |
!!! | AGAAAATGAAGGGCATTTTG+AGG | + | Chr2:2550086-2550105 | MsG0280006479.01.T01:CDS | 35.0% |
AAGAGGTCAAGTTCGTACAA+TGG | + | Chr2:2550387-2550406 | MsG0280006479.01.T01:CDS | 40.0% | |
ACACCCTGCAAATATCTTGT+TGG | - | Chr2:2550354-2550373 | None:intergenic | 40.0% | |
AGAGGTCAAGTTCGTACAAT+GGG | + | Chr2:2550388-2550407 | MsG0280006479.01.T01:CDS | 40.0% | |
AGAGGTGAAGGTTTGATTGA+AGG | + | Chr2:2549739-2549758 | MsG0280006479.01.T01:CDS | 40.0% | |
AGGCCAACAAGATATTTGCA+GGG | + | Chr2:2550348-2550367 | MsG0280006479.01.T01:CDS | 40.0% | |
GAAGAACAACAGCATCAACA+TGG | + | Chr2:2549628-2549647 | MsG0280006479.01.T01:CDS | 40.0% | |
GAAGAAGAAGAAGCAGCTTA+AGG | + | Chr2:2549557-2549576 | MsG0280006479.01.T01:CDS | 40.0% | |
TACGAACTTGACCTCTTCAT+TGG | - | Chr2:2550384-2550403 | None:intergenic | 40.0% | |
TAGGCCAACAAGATATTTGC+AGG | + | Chr2:2550347-2550366 | MsG0280006479.01.T01:CDS | 40.0% | |
TCCATAGAAACAGATCTCCT+AGG | - | Chr2:2550159-2550178 | None:intergenic | 40.0% | |
!! | GGTGATGGAGGATAGTAATA+AGG | - | Chr2:2549409-2549428 | None:intergenic | 40.0% |
!! | TCTTGTTGTTGTGATGATGG+TGG | - | Chr2:2549436-2549455 | None:intergenic | 40.0% |
!! | TGGTCTTGTTGTTGTGATGA+TGG | - | Chr2:2549439-2549458 | None:intergenic | 40.0% |
ACAATTGGAGCCCTACACAT+AGG | - | Chr2:2549889-2549908 | None:intergenic | 45.0% | |
ACAGCATCAACATGGATCTG+TGG | + | Chr2:2549636-2549655 | MsG0280006479.01.T01:CDS | 45.0% | |
ACTCAACCCTAGCAACTGTA+GGG | - | Chr2:2549918-2549937 | None:intergenic | 45.0% | |
AGTTGCTAGGGTTGAGTCTT+TGG | + | Chr2:2549921-2549940 | MsG0280006479.01.T01:CDS | 45.0% | |
CTTGACCTCTTCATTGGACT+AGG | - | Chr2:2550378-2550397 | None:intergenic | 45.0% | |
GTGTTCCTAGTCCAATGAAG+AGG | + | Chr2:2550370-2550389 | MsG0280006479.01.T01:CDS | 45.0% | |
TGAAAGGCAAGTTGTCGATG+CGG | + | Chr2:2550119-2550138 | MsG0280006479.01.T01:CDS | 45.0% | |
! | AAGCAAGAAGAGAAAGCGTG+AGG | - | Chr2:2549486-2549505 | None:intergenic | 45.0% |
!! | CTGTGGTGGATCATCCTATT+TGG | + | Chr2:2549653-2549672 | MsG0280006479.01.T01:CDS | 45.0% |
!! | GCCTAGGAGATCTGTTTCTA+TGG | + | Chr2:2550155-2550174 | MsG0280006479.01.T01:CDS | 45.0% |
!! | TGTTGTTGTGATGATGGTGG+TGG | - | Chr2:2549433-2549452 | None:intergenic | 45.0% |
GACTCAACCCTAGCAACTGT+AGG | - | Chr2:2549919-2549938 | None:intergenic | 50.0% | |
GCATCAACATGGATCTGTGG+TGG | + | Chr2:2549639-2549658 | MsG0280006479.01.T01:CDS | 50.0% | |
! | TCGATGCGGTTAGTGTCGTT+CGG | + | Chr2:2550133-2550152 | MsG0280006479.01.T01:CDS | 50.0% |
!! | TGTTGTGATGATGGTGGTGG+TGG | - | Chr2:2549430-2549449 | None:intergenic | 50.0% |
!! | GATGATGGTGGTGGTGGTGA+TGG | - | Chr2:2549424-2549443 | None:intergenic | 55.0% |
! | CGGTTAGTGTCGTTCGGCCT+AGG | + | Chr2:2550139-2550158 | MsG0280006479.01.T01:CDS | 60.0% |
!! | GATGGTGGTGGTGGTGATGG+AGG | - | Chr2:2549421-2549440 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 2549280 | 2550476 | 2549280 | ID=MsG0280006479.01;Name=MsG0280006479.01 |
Chr2 | mRNA | 2549280 | 2550476 | 2549280 | ID=MsG0280006479.01.T01;Parent=MsG0280006479.01;Name=MsG0280006479.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|398 |
Chr2 | exon | 2549280 | 2550476 | 2549280 | ID=MsG0280006479.01.T01:exon:461;Parent=MsG0280006479.01.T01 |
Chr2 | CDS | 2549280 | 2550476 | 2549280 | ID=MsG0280006479.01.T01:cds;Parent=MsG0280006479.01.T01 |
Gene Sequence |
Protein sequence |