Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048309.01.T01 | XP_003593242.1 | 91.973 | 299 | 16 | 2 | 66 | 363 | 98 | 389 | 0 | 529 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048309.01.T01 | Q8LFY8 | 54 | 150 | 65 | 3 | 83 | 231 | 131 | 277 | 6.98E-44 | 159 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048309.01.T01 | G7IPM0 | 91.973 | 299 | 16 | 2 | 66 | 363 | 98 | 389 | 0.0 | 529 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048205.01 | MsG0080048309.01 | 0.826748 | 2.287630e-54 | 2.164431e-51 |
MsG0080048207.01 | MsG0080048309.01 | 0.808711 | 2.707538e-50 | 1.559103e-47 |
MsG0080048309.01 | MsG0180000089.01 | 0.810239 | 1.272514e-50 | 7.630389e-48 |
MsG0080048309.01 | MsG0180000585.01 | 0.815675 | 8.188165e-52 | 5.682265e-49 |
MsG0080048309.01 | MsG0180001922.01 | 0.845427 | 4.089475e-59 | 6.812377e-56 |
MsG0080048309.01 | MsG0180003190.01 | 0.805910 | 1.062469e-49 | 5.689740e-47 |
MsG0080048309.01 | MsG0180003252.01 | 0.812763 | 3.599457e-51 | 2.308217e-48 |
MsG0080048309.01 | MsG0180003744.01 | 0.807944 | 3.946088e-50 | 2.227071e-47 |
MsG0080048309.01 | MsG0180005813.01 | 0.808380 | 3.186694e-50 | 1.819373e-47 |
MsG0080048309.01 | MsG0180006016.01 | 0.804935 | 1.700899e-49 | 8.883695e-47 |
MsG0080048309.01 | MsG0180006047.01 | 0.837920 | 3.908449e-57 | 5.152928e-54 |
MsG0080048309.01 | MsG0180006050.01 | 0.832944 | 7.077660e-56 | 8.031200e-53 |
MsG0080048309.01 | MsG0280006479.01 | 0.950158 | 2.930393e-108 | 6.120313e-103 |
MsG0080048309.01 | MsG0280006728.01 | 0.801790 | 7.626831e-49 | 3.674800e-46 |
MsG0080048309.01 | MsG0280007272.01 | 0.805870 | 1.083301e-49 | 5.795437e-47 |
MsG0080048309.01 | MsG0280007549.01 | 0.820017 | 8.563596e-53 | 6.697754e-50 |
MsG0080048309.01 | MsG0280007585.01 | 0.832279 | 1.034777e-55 | 1.151027e-52 |
MsG0080048309.01 | MsG0280007749.01 | 0.825356 | 4.901350e-54 | 4.456949e-51 |
MsG0080048309.01 | MsG0280007948.01 | 0.814078 | 1.850476e-51 | 1.229569e-48 |
MsG0080048309.01 | MsG0280010416.01 | 0.821447 | 4.018725e-53 | 3.270235e-50 |
MsG0080048309.01 | MsG0280011144.01 | 0.802084 | 6.635283e-49 | 3.221107e-46 |
MsG0080048309.01 | MsG0380014561.01 | 0.808589 | 2.875549e-50 | 1.650599e-47 |
MsG0080048309.01 | MsG0380015931.01 | 0.810405 | 1.171640e-50 | 7.056033e-48 |
MsG0080048309.01 | MsG0480021134.01 | 0.808398 | 3.159217e-50 | 1.804501e-47 |
MsG0080048309.01 | MsG0480021204.01 | 0.827994 | 1.150404e-54 | 1.128786e-51 |
MsG0080048309.01 | MsG0480021240.01 | 0.849835 | 2.505467e-60 | 4.811473e-57 |
MsG0080048309.01 | MsG0480022026.01 | 0.801633 | 8.212162e-49 | 3.941098e-46 |
MsG0080048309.01 | MsG0480023224.01 | 0.807196 | 5.688198e-50 | 3.148379e-47 |
MsG0080048309.01 | MsG0480023517.01 | 0.810145 | 1.332928e-50 | 7.973056e-48 |
MsG0080048309.01 | MsG0480023554.01 | 0.814419 | 1.555581e-51 | 1.043288e-48 |
MsG0080048309.01 | MsG0580024205.01 | 0.803526 | 3.342630e-49 | 1.683638e-46 |
MsG0080048309.01 | MsG0580024232.01 | 0.823645 | 1.239008e-53 | 1.073148e-50 |
MsG0080048309.01 | MsG0580025115.01 | 0.802146 | 6.444167e-49 | 3.133225e-46 |
MsG0080048309.01 | MsG0580025414.01 | 0.808695 | 2.729739e-50 | 1.571217e-47 |
MsG0080048309.01 | MsG0580025497.01 | 0.802605 | 5.181771e-49 | 2.549087e-46 |
MsG0080048309.01 | MsG0580025907.01 | 0.800201 | 1.610540e-48 | 7.453896e-46 |
MsG0080048309.01 | MsG0580026068.01 | 0.845306 | 4.409572e-59 | 7.317346e-56 |
MsG0080048309.01 | MsG0580028185.01 | 0.802175 | 6.356345e-49 | 3.092786e-46 |
MsG0080048309.01 | MsG0580028526.01 | 0.802560 | 5.294543e-49 | 2.601513e-46 |
MsG0080048309.01 | MsG0580029658.01 | 0.826375 | 2.808096e-54 | 2.628908e-51 |
MsG0080048309.01 | MsG0580029758.01 | 0.811566 | 6.567399e-51 | 4.079019e-48 |
MsG0080048309.01 | MsG0680030841.01 | 0.820921 | 5.311249e-53 | 4.259492e-50 |
MsG0080048309.01 | MsG0680034190.01 | 0.809822 | 1.564767e-50 | 9.281282e-48 |
MsG0080048309.01 | MsG0780036289.01 | 0.800861 | 1.181570e-48 | 5.561228e-46 |
MsG0080048309.01 | MsG0780036854.01 | 0.819711 | 1.006024e-52 | 7.801026e-50 |
MsG0080048309.01 | MsG0780037515.01 | 0.802456 | 5.563200e-49 | 2.726394e-46 |
MsG0080048309.01 | MsG0780039452.01 | 0.801902 | 7.232783e-49 | 3.494977e-46 |
MsG0080048309.01 | MsG0780039587.01 | 0.820375 | 7.091139e-53 | 5.601330e-50 |
MsG0080048309.01 | MsG0780039741.01 | 0.809617 | 1.732142e-50 | 1.021927e-47 |
MsG0080048309.01 | MsG0780040742.01 | 0.840244 | 9.770862e-58 | 1.383491e-54 |
MsG0080048309.01 | MsG0780040758.01 | 0.814555 | 1.451456e-51 | 9.770158e-49 |
MsG0080048309.01 | MsG0780041370.01 | 0.800801 | 1.215632e-48 | 5.712470e-46 |
MsG0080048309.01 | MsG0880043001.01 | 0.828064 | 1.106455e-54 | 1.087876e-51 |
MsG0080048309.01 | MsG0880043082.01 | 0.803760 | 2.988705e-49 | 1.514397e-46 |
MsG0080048309.01 | MsG0880043162.01 | 0.810394 | 1.178260e-50 | 7.093777e-48 |
MsG0080048309.01 | MsG0880044409.01 | 0.809682 | 1.676910e-50 | 9.910034e-48 |
MsG0080048309.01 | MsG0880044546.01 | 0.830247 | 3.270297e-55 | 3.426713e-52 |
MsG0080048309.01 | MsG0880045106.01 | 0.844744 | 6.253669e-59 | 1.019426e-55 |
MsG0080048309.01 | MsG0880046047.01 | 0.803526 | 3.342630e-49 | 1.683638e-46 |
MsG0080048309.01 | MsG0880046058.01 | 0.819133 | 1.362578e-52 | 1.039671e-49 |
MsG0080048309.01 | MsG0880046329.01 | 0.837271 | 5.737033e-57 | 7.413208e-54 |
MsG0080048309.01 | MsG0880046396.01 | 0.822906 | 1.843013e-53 | 1.563305e-50 |
MsG0080048309.01 | MsG0880046404.01 | 0.828825 | 7.249510e-55 | 7.286838e-52 |
MsG0080048309.01 | MsG0880046733.01 | 0.810257 | 1.261421e-50 | 7.567422e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048309.01.T01 | MTR_2g009310 | 91.973 | 299 | 16 | 2 | 66 | 363 | 98 | 389 | 0.0 | 529 |
MsG0080048309.01.T01 | MTR_4g093830 | 49.147 | 293 | 110 | 10 | 71 | 357 | 95 | 354 | 5.63e-73 | 231 |
MsG0080048309.01.T01 | MTR_5g064890 | 56.618 | 136 | 56 | 1 | 93 | 225 | 118 | 253 | 2.92e-45 | 159 |
MsG0080048309.01.T01 | MTR_8g089880 | 60.784 | 102 | 37 | 1 | 91 | 189 | 115 | 216 | 3.17e-44 | 154 |
MsG0080048309.01.T01 | MTR_5g030010 | 36.704 | 267 | 137 | 10 | 94 | 347 | 113 | 360 | 1.23e-37 | 139 |
MsG0080048309.01.T01 | MTR_8g066780 | 35.178 | 253 | 139 | 8 | 99 | 346 | 110 | 342 | 1.00e-30 | 120 |
MsG0080048309.01.T01 | MTR_4g106680 | 40.741 | 108 | 63 | 1 | 67 | 174 | 71 | 177 | 1.00e-21 | 94.4 |
MsG0080048309.01.T01 | MTR_3g110190 | 55.072 | 69 | 31 | 0 | 103 | 171 | 66 | 134 | 1.89e-21 | 94.4 |
MsG0080048309.01.T01 | MTR_4g129420 | 42.991 | 107 | 59 | 2 | 96 | 201 | 110 | 215 | 4.43e-21 | 94.7 |
MsG0080048309.01.T01 | MTR_6g007737 | 47.561 | 82 | 43 | 0 | 96 | 177 | 126 | 207 | 1.65e-20 | 92.0 |
MsG0080048309.01.T01 | MTR_5g034790 | 56.522 | 69 | 30 | 0 | 103 | 171 | 116 | 184 | 2.73e-20 | 91.3 |
MsG0080048309.01.T01 | MTR_6g087150 | 44.086 | 93 | 50 | 1 | 100 | 190 | 90 | 182 | 3.68e-20 | 90.9 |
MsG0080048309.01.T01 | MTR_3g100400 | 41.525 | 118 | 60 | 1 | 103 | 220 | 130 | 238 | 3.94e-20 | 91.3 |
MsG0080048309.01.T01 | MTR_4g120270 | 48.101 | 79 | 39 | 1 | 103 | 181 | 80 | 156 | 4.81e-20 | 89.0 |
MsG0080048309.01.T01 | MTR_3g094000 | 42.697 | 89 | 49 | 1 | 93 | 179 | 81 | 169 | 5.36e-20 | 86.7 |
MsG0080048309.01.T01 | MTR_8g063660 | 52.778 | 72 | 34 | 0 | 103 | 174 | 68 | 139 | 7.35e-20 | 89.7 |
MsG0080048309.01.T01 | MTR_1g082550 | 52.439 | 82 | 30 | 2 | 103 | 178 | 98 | 176 | 9.00e-20 | 89.7 |
MsG0080048309.01.T01 | MTR_1g043410 | 44.792 | 96 | 43 | 2 | 82 | 174 | 80 | 168 | 1.59e-19 | 88.6 |
MsG0080048309.01.T01 | MTR_5g064980 | 45.882 | 85 | 43 | 1 | 103 | 184 | 108 | 192 | 2.69e-19 | 88.6 |
MsG0080048309.01.T01 | MTR_5g026720 | 49.367 | 79 | 35 | 2 | 107 | 180 | 66 | 144 | 4.06e-19 | 83.6 |
MsG0080048309.01.T01 | MTR_7g113800 | 50.000 | 82 | 32 | 2 | 103 | 178 | 91 | 169 | 6.19e-19 | 87.4 |
MsG0080048309.01.T01 | MTR_3g464780 | 43.697 | 119 | 56 | 3 | 93 | 200 | 92 | 210 | 1.22e-18 | 84.7 |
MsG0080048309.01.T01 | MTR_2g436100 | 40.336 | 119 | 60 | 2 | 101 | 216 | 91 | 201 | 1.72e-18 | 85.1 |
MsG0080048309.01.T01 | MTR_5g066250 | 45.833 | 72 | 39 | 0 | 103 | 174 | 134 | 205 | 1.81e-18 | 86.7 |
MsG0080048309.01.T01 | MTR_8g023400 | 35.507 | 138 | 75 | 4 | 93 | 230 | 82 | 205 | 2.32e-18 | 85.1 |
MsG0080048309.01.T01 | MTR_1g074190 | 30.952 | 210 | 112 | 6 | 99 | 280 | 95 | 299 | 5.48e-18 | 84.3 |
MsG0080048309.01.T01 | MTR_7g076250 | 44.737 | 76 | 41 | 1 | 103 | 177 | 63 | 138 | 6.55e-18 | 81.3 |
MsG0080048309.01.T01 | MTR_7g116220 | 40.367 | 109 | 53 | 2 | 103 | 199 | 70 | 178 | 7.85e-18 | 80.9 |
MsG0080048309.01.T01 | MTR_2g055790 | 44.000 | 75 | 39 | 1 | 103 | 177 | 77 | 148 | 1.17e-17 | 80.9 |
MsG0080048309.01.T01 | MTR_3g086730 | 33.766 | 154 | 82 | 6 | 104 | 249 | 52 | 193 | 1.90e-17 | 80.9 |
MsG0080048309.01.T01 | MTR_1g070140 | 41.284 | 109 | 55 | 3 | 93 | 197 | 90 | 193 | 1.98e-17 | 82.8 |
MsG0080048309.01.T01 | MTR_3g099650 | 40.659 | 91 | 51 | 1 | 100 | 187 | 104 | 194 | 2.65e-17 | 82.8 |
MsG0080048309.01.T01 | MTR_3g086700 | 36.066 | 122 | 66 | 4 | 128 | 249 | 74 | 183 | 3.02e-17 | 79.3 |
MsG0080048309.01.T01 | MTR_8g071815 | 59.615 | 52 | 21 | 0 | 129 | 180 | 90 | 141 | 3.78e-17 | 79.0 |
MsG0080048309.01.T01 | MTR_7g073200 | 49.275 | 69 | 35 | 0 | 103 | 171 | 81 | 149 | 4.37e-17 | 78.6 |
MsG0080048309.01.T01 | MTR_8g073120 | 42.353 | 85 | 41 | 3 | 103 | 184 | 70 | 149 | 5.36e-17 | 79.0 |
MsG0080048309.01.T01 | MTR_5g026730 | 55.357 | 56 | 25 | 0 | 125 | 180 | 90 | 145 | 5.50e-17 | 78.2 |
MsG0080048309.01.T01 | MTR_3g091620 | 48.611 | 72 | 37 | 0 | 101 | 172 | 99 | 170 | 7.05e-17 | 81.3 |
MsG0080048309.01.T01 | MTR_7g116210 | 51.429 | 70 | 33 | 1 | 103 | 172 | 10 | 78 | 7.62e-17 | 76.3 |
MsG0080048309.01.T01 | MTR_7g116200 | 51.429 | 70 | 33 | 1 | 103 | 172 | 68 | 136 | 1.08e-16 | 77.4 |
MsG0080048309.01.T01 | MTR_4g063070 | 40.260 | 77 | 44 | 1 | 103 | 177 | 308 | 384 | 2.37e-16 | 80.1 |
MsG0080048309.01.T01 | MTR_2g096350 | 33.333 | 108 | 65 | 2 | 104 | 204 | 108 | 215 | 3.82e-16 | 77.0 |
MsG0080048309.01.T01 | MTR_4g056590 | 41.096 | 73 | 40 | 1 | 103 | 175 | 100 | 169 | 5.06e-16 | 76.3 |
MsG0080048309.01.T01 | MTR_7g117540 | 46.479 | 71 | 37 | 1 | 104 | 174 | 77 | 146 | 6.83e-16 | 77.4 |
MsG0080048309.01.T01 | MTR_7g096690 | 42.169 | 83 | 44 | 1 | 99 | 177 | 66 | 148 | 8.44e-16 | 77.8 |
MsG0080048309.01.T01 | MTR_2g041200 | 61.702 | 47 | 18 | 0 | 128 | 174 | 108 | 154 | 1.09e-15 | 74.7 |
MsG0080048309.01.T01 | MTR_5g022920 | 59.574 | 47 | 19 | 0 | 125 | 171 | 185 | 231 | 1.28e-15 | 75.9 |
MsG0080048309.01.T01 | MTR_5g064990 | 36.975 | 119 | 54 | 3 | 103 | 218 | 114 | 214 | 1.63e-15 | 77.4 |
MsG0080048309.01.T01 | MTR_3g078470 | 42.857 | 77 | 42 | 1 | 98 | 172 | 71 | 147 | 1.80e-15 | 75.1 |
MsG0080048309.01.T01 | MTR_6g055030 | 44.737 | 76 | 33 | 2 | 103 | 172 | 97 | 169 | 2.09e-15 | 76.6 |
MsG0080048309.01.T01 | MTR_8g092960 | 62.222 | 45 | 17 | 0 | 127 | 171 | 128 | 172 | 4.34e-15 | 73.9 |
MsG0080048309.01.T01 | MTR_7g079290 | 38.462 | 91 | 50 | 2 | 103 | 189 | 125 | 213 | 4.47e-15 | 73.9 |
MsG0080048309.01.T01 | MTR_8g092840 | 62.222 | 45 | 17 | 0 | 127 | 171 | 138 | 182 | 5.03e-15 | 73.9 |
MsG0080048309.01.T01 | MTR_7g116180 | 47.945 | 73 | 35 | 1 | 103 | 172 | 67 | 139 | 5.19e-15 | 72.8 |
MsG0080048309.01.T01 | MTR_3g114500 | 54.717 | 53 | 24 | 0 | 120 | 172 | 62 | 114 | 5.87e-15 | 71.2 |
MsG0080048309.01.T01 | MTR_3g078450 | 39.175 | 97 | 52 | 3 | 78 | 172 | 56 | 147 | 6.26e-15 | 73.6 |
MsG0080048309.01.T01 | MTR_8g009190 | 45.833 | 72 | 36 | 1 | 107 | 175 | 80 | 151 | 6.88e-15 | 75.1 |
MsG0080048309.01.T01 | MTR_5g024730 | 57.778 | 45 | 19 | 0 | 127 | 171 | 103 | 147 | 7.38e-15 | 73.2 |
MsG0080048309.01.T01 | MTR_1g070425 | 47.945 | 73 | 35 | 1 | 103 | 172 | 68 | 140 | 7.77e-15 | 72.4 |
MsG0080048309.01.T01 | MTR_8g093010 | 42.857 | 84 | 37 | 2 | 127 | 201 | 132 | 213 | 9.05e-15 | 73.2 |
MsG0080048309.01.T01 | MTR_2g044570 | 50.877 | 57 | 28 | 0 | 118 | 174 | 72 | 128 | 9.78e-15 | 74.3 |
MsG0080048309.01.T01 | MTR_5g071930 | 64.583 | 48 | 17 | 0 | 128 | 175 | 88 | 135 | 1.10e-14 | 72.4 |
MsG0080048309.01.T01 | MTR_4g030070 | 28.767 | 146 | 84 | 3 | 102 | 232 | 84 | 224 | 1.10e-14 | 73.2 |
MsG0080048309.01.T01 | MTR_8g092970 | 60.000 | 45 | 18 | 0 | 127 | 171 | 129 | 173 | 1.15e-14 | 72.8 |
MsG0080048309.01.T01 | MTR_7g079280 | 39.726 | 73 | 42 | 1 | 101 | 171 | 78 | 150 | 1.27e-14 | 71.6 |
MsG0080048309.01.T01 | MTR_8g028465 | 43.662 | 71 | 38 | 1 | 101 | 171 | 88 | 156 | 1.36e-14 | 72.4 |
MsG0080048309.01.T01 | MTR_8g092990 | 60.000 | 45 | 18 | 0 | 127 | 171 | 139 | 183 | 1.52e-14 | 72.8 |
MsG0080048309.01.T01 | MTR_2g090950 | 54.902 | 51 | 23 | 0 | 128 | 178 | 122 | 172 | 2.02e-14 | 72.4 |
MsG0080048309.01.T01 | MTR_3g116000 | 49.091 | 55 | 28 | 0 | 121 | 175 | 96 | 150 | 2.42e-14 | 71.2 |
MsG0080048309.01.T01 | MTR_8g074900 | 57.778 | 45 | 19 | 0 | 127 | 171 | 178 | 222 | 2.51e-14 | 72.0 |
MsG0080048309.01.T01 | MTR_3g095560 | 55.102 | 49 | 22 | 0 | 127 | 175 | 134 | 182 | 3.44e-14 | 72.0 |
MsG0080048309.01.T01 | MTR_8g019710 | 54.902 | 51 | 23 | 0 | 124 | 174 | 49 | 99 | 3.61e-14 | 69.3 |
MsG0080048309.01.T01 | MTR_8g092930 | 57.778 | 45 | 19 | 0 | 127 | 171 | 137 | 181 | 3.76e-14 | 71.6 |
MsG0080048309.01.T01 | MTR_8g092985 | 59.091 | 44 | 18 | 0 | 128 | 171 | 137 | 180 | 3.80e-14 | 71.2 |
MsG0080048309.01.T01 | MTR_1g492830 | 48.000 | 50 | 26 | 0 | 125 | 174 | 84 | 133 | 3.85e-14 | 71.2 |
MsG0080048309.01.T01 | MTR_3g071300 | 40.278 | 72 | 43 | 0 | 122 | 193 | 99 | 170 | 4.08e-14 | 70.1 |
MsG0080048309.01.T01 | MTR_2g090905 | 55.319 | 47 | 21 | 0 | 128 | 174 | 70 | 116 | 4.20e-14 | 68.9 |
MsG0080048309.01.T01 | MTR_1g100737 | 48.077 | 52 | 27 | 0 | 121 | 172 | 115 | 166 | 8.08e-14 | 69.7 |
MsG0080048309.01.T01 | MTR_8g032690 | 42.466 | 73 | 40 | 1 | 129 | 199 | 19 | 91 | 9.65e-14 | 67.4 |
MsG0080048309.01.T01 | MTR_5g092750 | 53.061 | 49 | 23 | 0 | 129 | 177 | 185 | 233 | 1.55e-13 | 69.7 |
MsG0080048309.01.T01 | MTR_6g055030 | 64.286 | 42 | 15 | 0 | 131 | 172 | 97 | 138 | 2.56e-13 | 70.1 |
MsG0080048309.01.T01 | MTR_2g035800 | 37.234 | 94 | 55 | 1 | 91 | 180 | 60 | 153 | 2.58e-13 | 67.8 |
MsG0080048309.01.T01 | MTR_5g082940 | 51.020 | 49 | 24 | 0 | 124 | 172 | 98 | 146 | 3.32e-13 | 67.4 |
MsG0080048309.01.T01 | MTR_5g092790 | 40.541 | 74 | 42 | 1 | 103 | 174 | 157 | 230 | 5.81e-13 | 68.2 |
MsG0080048309.01.T01 | MTR_1g026070 | 49.057 | 53 | 27 | 0 | 120 | 172 | 62 | 114 | 8.36e-13 | 65.5 |
MsG0080048309.01.T01 | MTR_7g059360 | 48.333 | 60 | 31 | 0 | 126 | 185 | 155 | 214 | 9.73e-13 | 67.4 |
MsG0080048309.01.T01 | MTR_1g056350 | 46.154 | 52 | 28 | 0 | 127 | 178 | 101 | 152 | 1.91e-12 | 65.5 |
MsG0080048309.01.T01 | MTR_7g108855 | 39.726 | 73 | 42 | 1 | 104 | 174 | 67 | 139 | 2.36e-12 | 65.9 |
MsG0080048309.01.T01 | MTR_3g078520 | 43.548 | 62 | 32 | 1 | 111 | 172 | 88 | 146 | 5.19e-12 | 63.9 |
MsG0080048309.01.T01 | MTR_5g076990 | 52.941 | 51 | 24 | 0 | 128 | 178 | 105 | 155 | 6.13e-12 | 66.2 |
MsG0080048309.01.T01 | MTR_4g094725 | 55.814 | 43 | 19 | 0 | 129 | 171 | 106 | 148 | 8.84e-12 | 63.2 |
MsG0080048309.01.T01 | MTR_8g099495 | 44.118 | 68 | 32 | 2 | 129 | 196 | 347 | 408 | 1.92e-11 | 65.5 |
MsG0080048309.01.T01 | MTR_8g066740 | 55.556 | 45 | 20 | 0 | 128 | 172 | 105 | 149 | 2.67e-11 | 64.3 |
MsG0080048309.01.T01 | MTR_3g081030 | 48.148 | 54 | 26 | 1 | 129 | 182 | 119 | 170 | 3.47e-11 | 62.8 |
MsG0080048309.01.T01 | MTR_4g022410 | 44.444 | 63 | 34 | 1 | 116 | 177 | 99 | 161 | 4.76e-11 | 61.6 |
MsG0080048309.01.T01 | MTR_8g099515 | 53.488 | 43 | 20 | 0 | 129 | 171 | 337 | 379 | 9.75e-11 | 63.2 |
MsG0080048309.01.T01 | MTR_8g027980 | 53.061 | 49 | 21 | 1 | 128 | 174 | 116 | 164 | 9.86e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048309.01.T01 | AT1G72220 | 54.000 | 150 | 65 | 3 | 83 | 231 | 131 | 277 | 7.11e-45 | 159 |
MsG0080048309.01.T01 | AT4G33565 | 48.000 | 175 | 63 | 4 | 91 | 265 | 179 | 325 | 4.91e-44 | 156 |
MsG0080048309.01.T01 | AT5G10380 | 70.732 | 82 | 24 | 0 | 94 | 175 | 100 | 181 | 1.04e-38 | 140 |
MsG0080048309.01.T01 | AT5G17600 | 38.247 | 251 | 134 | 8 | 103 | 340 | 116 | 358 | 2.83e-37 | 138 |
MsG0080048309.01.T01 | AT3G03550 | 46.667 | 135 | 58 | 2 | 104 | 238 | 134 | 254 | 9.98e-32 | 123 |
MsG0080048309.01.T01 | AT4G17905 | 49.495 | 99 | 47 | 2 | 101 | 197 | 125 | 222 | 1.82e-23 | 99.4 |
MsG0080048309.01.T01 | AT4G17905 | 43.200 | 125 | 55 | 4 | 101 | 223 | 151 | 261 | 2.82e-23 | 99.4 |
MsG0080048309.01.T01 | AT1G23980 | 41.026 | 117 | 63 | 2 | 58 | 174 | 79 | 189 | 6.14e-23 | 99.0 |
MsG0080048309.01.T01 | AT2G20030 | 53.623 | 69 | 32 | 0 | 103 | 171 | 98 | 166 | 9.06e-21 | 93.2 |
MsG0080048309.01.T01 | AT1G72200 | 47.475 | 99 | 48 | 2 | 103 | 198 | 115 | 212 | 1.02e-20 | 93.2 |
MsG0080048309.01.T01 | AT2G18650 | 53.333 | 75 | 34 | 1 | 103 | 176 | 99 | 173 | 3.01e-20 | 92.0 |
MsG0080048309.01.T01 | AT5G05810 | 52.174 | 69 | 33 | 0 | 103 | 171 | 120 | 188 | 9.16e-20 | 90.1 |
MsG0080048309.01.T01 | AT4G30400 | 50.649 | 77 | 37 | 1 | 96 | 171 | 100 | 176 | 2.03e-19 | 89.7 |
MsG0080048309.01.T01 | AT4G28890 | 50.000 | 72 | 36 | 0 | 100 | 171 | 94 | 165 | 3.06e-19 | 89.0 |
MsG0080048309.01.T01 | AT5G01880 | 46.575 | 73 | 39 | 0 | 103 | 175 | 79 | 151 | 3.93e-19 | 84.0 |
MsG0080048309.01.T01 | AT1G22500 | 51.899 | 79 | 35 | 1 | 103 | 178 | 89 | 167 | 4.40e-19 | 88.2 |
MsG0080048309.01.T01 | AT3G62690 | 48.315 | 89 | 42 | 2 | 104 | 190 | 88 | 174 | 6.03e-19 | 85.9 |
MsG0080048309.01.T01 | AT2G47560 | 53.247 | 77 | 34 | 1 | 100 | 174 | 77 | 153 | 7.53e-19 | 84.7 |
MsG0080048309.01.T01 | AT1G35330 | 48.101 | 79 | 38 | 1 | 103 | 178 | 100 | 178 | 1.71e-18 | 85.9 |
MsG0080048309.01.T01 | AT1G04360 | 47.500 | 80 | 33 | 2 | 103 | 174 | 101 | 179 | 2.97e-18 | 85.5 |
MsG0080048309.01.T01 | AT5G43420 | 43.182 | 88 | 36 | 1 | 99 | 172 | 94 | 181 | 3.45e-18 | 85.5 |
MsG0080048309.01.T01 | AT5G57750 | 52.239 | 67 | 31 | 1 | 106 | 171 | 98 | 164 | 4.21e-18 | 82.4 |
MsG0080048309.01.T01 | AT3G48030 | 37.719 | 114 | 61 | 2 | 59 | 171 | 67 | 171 | 4.28e-18 | 83.6 |
MsG0080048309.01.T01 | AT3G05200 | 42.105 | 114 | 50 | 4 | 103 | 210 | 99 | 202 | 4.79e-18 | 85.1 |
MsG0080048309.01.T01 | AT3G16720 | 38.346 | 133 | 63 | 5 | 103 | 224 | 94 | 218 | 4.91e-18 | 84.0 |
MsG0080048309.01.T01 | AT3G48030 | 37.719 | 114 | 61 | 2 | 59 | 171 | 145 | 249 | 5.63e-18 | 84.3 |
MsG0080048309.01.T01 | AT5G40250 | 36.434 | 129 | 59 | 3 | 64 | 176 | 69 | 190 | 9.49e-18 | 84.0 |
MsG0080048309.01.T01 | AT3G10910 | 47.826 | 69 | 36 | 0 | 103 | 171 | 88 | 156 | 1.05e-17 | 80.5 |
MsG0080048309.01.T01 | AT4G10150 | 30.872 | 149 | 94 | 2 | 102 | 250 | 85 | 224 | 2.86e-17 | 80.5 |
MsG0080048309.01.T01 | AT2G35000 | 59.615 | 52 | 21 | 0 | 126 | 177 | 132 | 183 | 4.44e-17 | 82.0 |
MsG0080048309.01.T01 | AT5G05280 | 44.304 | 79 | 43 | 1 | 103 | 181 | 88 | 165 | 5.28e-17 | 78.6 |
MsG0080048309.01.T01 | AT4G10160 | 40.506 | 79 | 46 | 1 | 102 | 180 | 71 | 148 | 5.36e-17 | 79.7 |
MsG0080048309.01.T01 | AT4G15975 | 32.353 | 136 | 72 | 3 | 103 | 219 | 51 | 185 | 5.69e-17 | 79.7 |
MsG0080048309.01.T01 | AT3G18930 | 45.455 | 88 | 38 | 2 | 103 | 180 | 120 | 207 | 1.08e-16 | 81.3 |
MsG0080048309.01.T01 | AT3G18930 | 45.455 | 88 | 38 | 2 | 103 | 180 | 120 | 207 | 1.08e-16 | 81.3 |
MsG0080048309.01.T01 | AT3G18930 | 45.455 | 88 | 38 | 2 | 103 | 180 | 120 | 207 | 1.08e-16 | 81.3 |
MsG0080048309.01.T01 | AT5G66070 | 61.702 | 47 | 18 | 0 | 125 | 171 | 172 | 218 | 1.68e-16 | 78.2 |
MsG0080048309.01.T01 | AT5G66070 | 61.702 | 47 | 18 | 0 | 125 | 171 | 172 | 218 | 1.68e-16 | 78.2 |
MsG0080048309.01.T01 | AT4G09120 | 45.570 | 79 | 40 | 1 | 103 | 178 | 94 | 172 | 2.24e-16 | 79.7 |
MsG0080048309.01.T01 | AT5G66070 | 61.702 | 47 | 18 | 0 | 125 | 171 | 196 | 242 | 2.68e-16 | 78.2 |
MsG0080048309.01.T01 | AT2G34990 | 41.772 | 79 | 43 | 1 | 103 | 178 | 89 | 167 | 4.26e-16 | 78.6 |
MsG0080048309.01.T01 | AT2G34990 | 41.772 | 79 | 43 | 1 | 103 | 178 | 67 | 145 | 4.47e-16 | 78.2 |
MsG0080048309.01.T01 | AT2G42350 | 55.102 | 49 | 22 | 0 | 124 | 172 | 95 | 143 | 1.01e-15 | 75.9 |
MsG0080048309.01.T01 | AT5G27420 | 57.407 | 54 | 20 | 1 | 118 | 171 | 116 | 166 | 1.04e-15 | 78.2 |
MsG0080048309.01.T01 | AT2G17730 | 63.043 | 46 | 17 | 0 | 129 | 174 | 196 | 241 | 1.27e-15 | 75.9 |
MsG0080048309.01.T01 | AT1G49230 | 46.154 | 78 | 32 | 2 | 127 | 204 | 129 | 196 | 1.36e-15 | 75.5 |
MsG0080048309.01.T01 | AT1G72310 | 43.836 | 73 | 40 | 1 | 117 | 189 | 115 | 186 | 1.54e-15 | 77.0 |
MsG0080048309.01.T01 | AT4G09110 | 41.772 | 79 | 43 | 1 | 103 | 178 | 94 | 172 | 1.59e-15 | 76.6 |
MsG0080048309.01.T01 | AT4G09100 | 43.421 | 76 | 40 | 1 | 103 | 175 | 56 | 131 | 1.73e-15 | 72.8 |
MsG0080048309.01.T01 | AT4G40070 | 44.737 | 76 | 39 | 1 | 100 | 172 | 92 | 167 | 2.21e-15 | 76.6 |
MsG0080048309.01.T01 | AT1G53820 | 38.158 | 76 | 46 | 1 | 99 | 174 | 91 | 165 | 2.27e-15 | 76.3 |
MsG0080048309.01.T01 | AT4G35840 | 65.116 | 43 | 15 | 0 | 129 | 171 | 191 | 233 | 2.37e-15 | 75.1 |
MsG0080048309.01.T01 | AT3G60220 | 45.070 | 71 | 36 | 1 | 107 | 174 | 92 | 162 | 3.42e-15 | 76.3 |
MsG0080048309.01.T01 | AT1G49210 | 45.946 | 74 | 39 | 1 | 103 | 175 | 108 | 181 | 6.21e-15 | 73.6 |
MsG0080048309.01.T01 | AT1G49200 | 56.000 | 50 | 22 | 0 | 126 | 175 | 133 | 182 | 6.69e-15 | 73.6 |
MsG0080048309.01.T01 | AT2G27940 | 37.805 | 82 | 48 | 2 | 91 | 172 | 105 | 183 | 1.28e-14 | 73.2 |
MsG0080048309.01.T01 | AT3G18773 | 55.769 | 52 | 23 | 0 | 126 | 177 | 127 | 178 | 1.63e-14 | 72.4 |
MsG0080048309.01.T01 | AT1G20823 | 55.102 | 49 | 22 | 0 | 127 | 175 | 109 | 157 | 1.83e-14 | 71.6 |
MsG0080048309.01.T01 | AT1G76410 | 43.243 | 74 | 41 | 1 | 103 | 175 | 77 | 150 | 2.11e-14 | 71.2 |
MsG0080048309.01.T01 | AT4G17920 | 45.833 | 72 | 36 | 1 | 103 | 171 | 81 | 152 | 3.10e-14 | 72.8 |
MsG0080048309.01.T01 | AT2G35420 | 35.484 | 93 | 55 | 2 | 103 | 192 | 77 | 167 | 3.88e-14 | 72.0 |
MsG0080048309.01.T01 | AT4G09130 | 53.571 | 56 | 23 | 1 | 117 | 172 | 111 | 163 | 5.34e-14 | 72.8 |
MsG0080048309.01.T01 | AT3G61550 | 37.931 | 87 | 43 | 2 | 103 | 178 | 99 | 185 | 6.26e-14 | 70.5 |
MsG0080048309.01.T01 | AT2G46160 | 37.209 | 86 | 46 | 1 | 102 | 179 | 103 | 188 | 7.20e-14 | 70.5 |
MsG0080048309.01.T01 | AT2G46160 | 37.209 | 86 | 46 | 1 | 102 | 179 | 103 | 188 | 7.20e-14 | 70.5 |
MsG0080048309.01.T01 | AT2G35910 | 35.484 | 93 | 57 | 1 | 103 | 192 | 121 | 213 | 7.35e-14 | 70.5 |
MsG0080048309.01.T01 | AT1G33480 | 36.486 | 74 | 46 | 1 | 102 | 175 | 74 | 146 | 7.39e-14 | 71.2 |
MsG0080048309.01.T01 | AT2G46493 | 35.644 | 101 | 57 | 3 | 77 | 171 | 82 | 180 | 1.03e-13 | 69.3 |
MsG0080048309.01.T01 | AT4G35480 | 57.778 | 45 | 19 | 0 | 127 | 171 | 111 | 155 | 1.17e-13 | 69.7 |
MsG0080048309.01.T01 | AT2G25410 | 37.113 | 97 | 54 | 2 | 89 | 182 | 284 | 376 | 1.21e-13 | 72.0 |
MsG0080048309.01.T01 | AT1G49220 | 61.364 | 44 | 17 | 0 | 128 | 171 | 134 | 177 | 1.25e-13 | 70.5 |
MsG0080048309.01.T01 | AT2G37580 | 55.102 | 49 | 22 | 0 | 126 | 174 | 139 | 187 | 1.85e-13 | 69.7 |
MsG0080048309.01.T01 | AT1G28040 | 36.082 | 97 | 51 | 3 | 84 | 171 | 201 | 295 | 4.68e-13 | 69.3 |
MsG0080048309.01.T01 | AT2G42360 | 38.961 | 77 | 46 | 1 | 103 | 178 | 81 | 157 | 5.58e-13 | 68.2 |
MsG0080048309.01.T01 | AT5G42200 | 52.941 | 51 | 24 | 0 | 127 | 177 | 102 | 152 | 7.39e-13 | 66.2 |
MsG0080048309.01.T01 | AT2G46494 | 38.372 | 86 | 49 | 2 | 89 | 171 | 274 | 358 | 1.04e-12 | 68.9 |
MsG0080048309.01.T01 | AT2G46495 | 39.130 | 92 | 39 | 3 | 99 | 182 | 259 | 341 | 1.17e-12 | 68.6 |
MsG0080048309.01.T01 | AT2G46495 | 39.130 | 92 | 39 | 3 | 99 | 182 | 287 | 369 | 1.45e-12 | 68.6 |
MsG0080048309.01.T01 | AT2G17450 | 51.064 | 47 | 23 | 0 | 125 | 171 | 98 | 144 | 1.66e-12 | 65.9 |
MsG0080048309.01.T01 | AT5G58580 | 31.098 | 164 | 103 | 6 | 103 | 260 | 111 | 270 | 2.42e-12 | 67.4 |
MsG0080048309.01.T01 | AT3G19140 | 38.462 | 78 | 47 | 1 | 94 | 171 | 45 | 121 | 2.57e-12 | 64.3 |
MsG0080048309.01.T01 | AT5G47610 | 48.000 | 50 | 26 | 0 | 128 | 177 | 106 | 155 | 4.22e-12 | 64.3 |
MsG0080048309.01.T01 | AT1G32361 | 40.845 | 71 | 38 | 2 | 102 | 171 | 129 | 196 | 4.93e-12 | 66.6 |
MsG0080048309.01.T01 | AT5G07040 | 40.625 | 64 | 34 | 1 | 128 | 191 | 93 | 152 | 5.36e-12 | 63.9 |
MsG0080048309.01.T01 | AT1G74410 | 47.917 | 48 | 25 | 0 | 127 | 174 | 174 | 221 | 7.03e-12 | 65.1 |
MsG0080048309.01.T01 | AT5G46650 | 43.836 | 73 | 37 | 2 | 103 | 171 | 85 | 157 | 7.38e-12 | 65.9 |
MsG0080048309.01.T01 | AT5G06490 | 31.522 | 92 | 56 | 1 | 99 | 183 | 92 | 183 | 9.55e-12 | 63.9 |
MsG0080048309.01.T01 | AT3G14320 | 54.545 | 44 | 20 | 0 | 128 | 171 | 87 | 130 | 9.91e-12 | 63.9 |
MsG0080048309.01.T01 | AT4G35840 | 61.538 | 39 | 15 | 0 | 133 | 171 | 227 | 265 | 1.00e-11 | 65.1 |
MsG0080048309.01.T01 | AT1G53010 | 40.260 | 77 | 37 | 2 | 103 | 171 | 97 | 172 | 1.15e-11 | 63.5 |
MsG0080048309.01.T01 | AT3G60966 | 54.000 | 50 | 23 | 0 | 129 | 178 | 62 | 111 | 2.71e-11 | 61.2 |
MsG0080048309.01.T01 | AT3G20395 | 29.008 | 131 | 72 | 3 | 50 | 179 | 111 | 221 | 2.95e-11 | 63.2 |
MsG0080048309.01.T01 | AT5G53110 | 47.917 | 48 | 25 | 0 | 124 | 171 | 325 | 372 | 3.30e-11 | 64.7 |
MsG0080048309.01.T01 | AT4G24015 | 56.818 | 44 | 19 | 0 | 129 | 172 | 105 | 148 | 5.96e-11 | 61.2 |
MsG0080048309.01.T01 | AT4G17245 | 46.667 | 60 | 31 | 1 | 128 | 186 | 101 | 160 | 6.92e-11 | 60.8 |
MsG0080048309.01.T01 | AT5G36001 | 51.111 | 45 | 22 | 0 | 127 | 171 | 262 | 306 | 9.27e-11 | 62.8 |
Find 77 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGGTTCAGATAAATAAAT+TGG | 0.134178 | contig271end:-123310 | MsG0080048309.01.T01:intron |
TCAATTGAGTCTAATATTAT+TGG | 0.171503 | contig271end:-121971 | MsG0080048309.01.T01:CDS |
GGTGAAAGTGAAACCAATTT+AGG | 0.183802 | contig271end:-122175 | MsG0080048309.01.T01:CDS |
ACTATCTTCAAACCCTAAAT+TGG | 0.190275 | contig271end:+122162 | None:intergenic |
AGTTGCTAGGGTTGAGTCTT+TGG | 0.245207 | contig271end:-122275 | MsG0080048309.01.T01:CDS |
GGTTAATGGAAATGAGAATT+TGG | 0.267606 | contig271end:-121906 | MsG0080048309.01.T01:CDS |
TGATTCTGAATTGAGGAATA+TGG | 0.277924 | contig271end:-122134 | MsG0080048309.01.T01:CDS |
GATGCTATTTCAAAGGTTAA+TGG | 0.289608 | contig271end:-121920 | MsG0080048309.01.T01:CDS |
CTGTGGTGGATCATCCTATT+TGG | 0.300381 | contig271end:-122543 | MsG0080048309.01.T01:CDS |
GTGAAAGTGAAACCAATTTA+GGG | 0.330008 | contig271end:-122174 | MsG0080048309.01.T01:CDS |
GCCTAGGAGATCCGTTTCTA+TGG | 0.336895 | contig271end:-122041 | MsG0080048309.01.T01:CDS |
CATACTCTGTCGGTTGGATT+AGG | 0.339220 | contig271end:+123265 | None:intergenic |
AGAAAAGCTACTACTTCCTT+TGG | 0.346806 | contig271end:+121874 | None:intergenic |
TAGGCCAACAAGATATTTGC+AGG | 0.357718 | contig271end:-121849 | MsG0080048309.01.T01:CDS |
TACGAACTTGACCTCTTCAT+TGG | 0.358700 | contig271end:+121815 | None:intergenic |
TGATTCTAGTTCAAGTTCAT+TGG | 0.360919 | contig271end:-122233 | MsG0080048309.01.T01:CDS |
TCGTTAAGTCGTCGGGGATT+TGG | 0.388402 | contig271end:-125949 | MsG0080048309.01.T01:CDS |
ATTTGGTATATTCGAACCTT+AGG | 0.393202 | contig271end:-122526 | MsG0080048309.01.T01:CDS |
ATTTACCTTGTATTGATACT+TGG | 0.395348 | contig271end:-122354 | MsG0080048309.01.T01:CDS |
GAAGAAGAAGAAGCAGCTTA+AGG | 0.398449 | contig271end:-122639 | MsG0080048309.01.T01:CDS |
ACTGTAGGGTTATTAACAAT+TGG | 0.403000 | contig271end:+122295 | None:intergenic |
CAACAGCTCAACAAAATGAT+AGG | 0.414938 | contig271end:-122603 | MsG0080048309.01.T01:CDS |
AGAGGTGAAGGTTTGATTGA+AGG | 0.419735 | contig271end:-122457 | MsG0080048309.01.T01:CDS |
ATGGGAAATTTCTTCTGTCT+TGG | 0.420117 | contig271end:-121790 | MsG0080048309.01.T01:CDS |
CTTGTATTGATACTTGGCTT+AGG | 0.434318 | contig271end:-122348 | MsG0080048309.01.T01:CDS |
CGGTTAGTGTCGTTCGGCCT+AGG | 0.439561 | contig271end:-122057 | MsG0080048309.01.T01:CDS |
AAGAAGAAGAAGCAGCTTAA+GGG | 0.441987 | contig271end:-122638 | MsG0080048309.01.T01:CDS |
AAGGTTCGAATATACCAAAT+AGG | 0.442246 | contig271end:+122529 | None:intergenic |
GTGGTTCAGATAAATAAATT+GGG | 0.443909 | contig271end:-123309 | MsG0080048309.01.T01:intron |
TTTGAGGTCGTTAAGTCGTC+GGG | 0.445300 | contig271end:-125956 | MsG0080048309.01.T01:CDS |
AAGTTTCTGAAAATATCATT+TGG | 0.455151 | contig271end:+121746 | None:intergenic |
AGAGGTCAAGTTCGTACAAT+GGG | 0.473529 | contig271end:-121808 | MsG0080048309.01.T01:CDS |
AGGAATATGGAAGAAAATGA+AGG | 0.480759 | contig271end:-122121 | MsG0080048309.01.T01:CDS |
TGTAAGTATAAGAGAGGTGA+AGG | 0.482072 | contig271end:-122469 | MsG0080048309.01.T01:CDS |
TTAATAACCCTACAGTTGCT+AGG | 0.487636 | contig271end:-122288 | MsG0080048309.01.T01:CDS |
ACACCCTGCAAATATCTTGT+TGG | 0.493613 | contig271end:+121845 | None:intergenic |
CAATGATGATGCTATTTCAA+AGG | 0.497440 | contig271end:-121927 | MsG0080048309.01.T01:CDS |
TTGAGGTATGTGAAAATGAA+AGG | 0.499251 | contig271end:-122093 | MsG0080048309.01.T01:CDS |
GGTTCACATACTCTGTCGGT+TGG | 0.500610 | contig271end:+123259 | None:intergenic |
ATACTAATTGTCCTATGTGT+AGG | 0.501670 | contig271end:-122321 | MsG0080048309.01.T01:CDS |
GGAATCATGTTTATCGCCGC+CGG | 0.508825 | contig271end:-126027 | MsG0080048309.01.T01:CDS |
TCGATGCGGTTAGTGTCGTT+CGG | 0.509630 | contig271end:-122063 | MsG0080048309.01.T01:CDS |
AAAAGAATCATCCATAGAAA+CGG | 0.517428 | contig271end:+122030 | None:intergenic |
TACTAATTGTCCTATGTGTA+GGG | 0.520232 | contig271end:-122320 | MsG0080048309.01.T01:CDS |
GAACTTCACTGGCGACGTCC+CGG | 0.522660 | contig271end:+126008 | None:intergenic |
TAATAACCCTACAGTTGCTA+GGG | 0.525677 | contig271end:-122287 | MsG0080048309.01.T01:CDS |
TAAGTCGTCGGGGATTTGGC+CGG | 0.529865 | contig271end:-125945 | MsG0080048309.01.T01:intron |
TCTTGACGCCGAGATTGAGA+TGG | 0.531627 | contig271end:-125987 | MsG0080048309.01.T01:CDS |
AGTGTTTGTAAGTATAAGAG+AGG | 0.532026 | contig271end:-122475 | MsG0080048309.01.T01:CDS |
TGAAAAGCATGATGACACTT+AGG | 0.532713 | contig271end:+122376 | None:intergenic |
GGTAGAGATGAAAATAAAGC+AGG | 0.540674 | contig271end:-123288 | MsG0080048309.01.T01:CDS |
CTCGGCGTCAAGAACTTCAC+TGG | 0.542799 | contig271end:+125997 | None:intergenic |
CTTGACCTCTTCATTGGACT+AGG | 0.544954 | contig271end:+121821 | None:intergenic |
CTTGACGCCGAGATTGAGAT+GGG | 0.546673 | contig271end:-125986 | MsG0080048309.01.T01:CDS |
TTTCGGTTCACATACTCTGT+CGG | 0.554313 | contig271end:+123255 | None:intergenic |
TCCATAGAAACGGATCTCCT+AGG | 0.554810 | contig271end:+122040 | None:intergenic |
GATGTTTCTGATGAAAATAG+TGG | 0.564866 | contig271end:-122196 | MsG0080048309.01.T01:CDS |
CTAAGCCAAGTATCAATACA+AGG | 0.569710 | contig271end:+122349 | None:intergenic |
GAATCATGTTTATCGCCGCC+GGG | 0.571201 | contig271end:-126026 | MsG0080048309.01.T01:CDS |
GACTCAACCCTAGCAACTGT+AGG | 0.588401 | contig271end:+122280 | None:intergenic |
ACACTGACCCATCTCAATCT+CGG | 0.588827 | contig271end:+125979 | None:intergenic |
GGAATATGGAAGAAAATGAA+GGG | 0.590398 | contig271end:-122120 | MsG0080048309.01.T01:CDS |
AACAGATTGATGAAGACCTA+AGG | 0.594317 | contig271end:+122510 | None:intergenic |
AATTTGGCAACTACTTCCAA+AGG | 0.595349 | contig271end:-121890 | MsG0080048309.01.T01:CDS |
AAGAGGTCAAGTTCGTACAA+TGG | 0.601002 | contig271end:-121809 | MsG0080048309.01.T01:CDS |
GCATCAACATGGATCTGTGG+TGG | 0.608189 | contig271end:-122557 | MsG0080048309.01.T01:CDS |
ACTCAACCCTAGCAACTGTA+GGG | 0.614286 | contig271end:+122281 | None:intergenic |
TCTGAGACTGGATGATGGGT+CGG | 0.616231 | contig271end:-126048 | None:intergenic |
ACAATTGGAGCCCTACACAT+AGG | 0.622227 | contig271end:+122310 | None:intergenic |
AGGCCAACAAGATATTTGCA+GGG | 0.633418 | contig271end:-121848 | MsG0080048309.01.T01:CDS |
GAAGAACAACAGCATCAACA+TGG | 0.634184 | contig271end:-122568 | MsG0080048309.01.T01:CDS |
TGAATCTGAGACTGGATGAT+GGG | 0.645726 | contig271end:-126052 | None:intergenic |
GTGTTCCTAGTCCAATGAAG+AGG | 0.650481 | contig271end:-121826 | MsG0080048309.01.T01:CDS |
ACAGCATCAACATGGATCTG+TGG | 0.662494 | contig271end:-122560 | MsG0080048309.01.T01:CDS |
TGAAAGGCAAGTTGTCGATG+CGG | 0.682963 | contig271end:-122077 | MsG0080048309.01.T01:CDS |
TTGAGGTCGTTAAGTCGTCG+GGG | 0.690044 | contig271end:-125955 | MsG0080048309.01.T01:CDS |
CTTCACTGGCGACGTCCCGG+CGG | 0.712776 | contig271end:+126011 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTAAAATAATAATAATTAG+AGG | - | contig271end:123525-123544 | MsG0080048309.01.T01:intron | 10.0% |
!! | TAATTAAATAATAATGATAG+GGG | + | contig271end:124686-124705 | None:intergenic | 10.0% |
!! | AGAAATCTTAAAAAATGTTA+TGG | - | contig271end:124019-124038 | MsG0080048309.01.T01:intron | 15.0% |
!! | ATAAATTTACAAAGAAAAGT+AGG | + | contig271end:122203-122222 | None:intergenic | 15.0% |
!! | ATATATAAGGCTATATTTAA+GGG | + | contig271end:122621-122640 | None:intergenic | 15.0% |
!! | ATTGTAATGATAATAATATG+AGG | - | contig271end:124846-124865 | MsG0080048309.01.T01:intron | 15.0% |
!! | ATTTAAAGATAAGTCATTAA+TGG | - | contig271end:121943-121962 | MsG0080048309.01.T01:CDS | 15.0% |
!! | TTTAATCACAAAATATAAGT+TGG | - | contig271end:124747-124766 | MsG0080048309.01.T01:intron | 15.0% |
!!! | TACTTTTCTTTGTAAATTTA+TGG | - | contig271end:122202-122221 | MsG0080048309.01.T01:CDS | 15.0% |
!!! | TTTTAAGATTTCTACTATTA+AGG | + | contig271end:124012-124031 | None:intergenic | 15.0% |
!! | GATATATAAGGCTATATTTA+AGG | + | contig271end:122622-122641 | None:intergenic | 20.0% |
!! | TCAACAAAACAAAATCATAA+GGG | + | contig271end:124651-124670 | None:intergenic | 20.0% |
!! | TCAATTGAGTCTAATATTAT+TGG | - | contig271end:125808-125827 | MsG0080048309.01.T01:intron | 20.0% |
!!! | AAGTTTCTGAAAATATCATT+TGG | + | contig271end:126036-126055 | None:intergenic | 20.0% |
!!! | AATCTAGAATATGTTCTTTA+TGG | + | contig271end:123936-123955 | None:intergenic | 20.0% |
!!! | AGTTTTTAAGGAATTTGATA+TGG | + | contig271end:123223-123242 | None:intergenic | 20.0% |
!!! | ATATTTTCAGAAACTTATGA+AGG | - | contig271end:126040-126059 | MsG0080048309.01.T01:CDS | 20.0% |
!!! | CGATATACTTTTTCTTATAA+TGG | - | contig271end:123130-123149 | MsG0080048309.01.T01:intron | 20.0% |
!!! | GAATTGATTGATTTTTCTAT+GGG | + | contig271end:124572-124591 | None:intergenic | 20.0% |
!!! | TTACTTTCTCTTTATTGTTT+TGG | - | contig271end:122164-122183 | MsG0080048309.01.T01:CDS | 20.0% |
!!! | TTATCTTTTATAGACATGAT+CGG | + | contig271end:122124-122143 | None:intergenic | 20.0% |
! | AAAAGAATCATCCATAGAAA+CGG | + | contig271end:125752-125771 | None:intergenic | 25.0% |
! | AAACAATGACTAATACAAGA+AGG | - | contig271end:122364-122383 | MsG0080048309.01.T01:CDS | 25.0% |
! | ATACTACATTGGGATATATA+AGG | + | contig271end:122634-122653 | None:intergenic | 25.0% |
! | ATTGCATCATAGAAAATTGA+TGG | - | contig271end:124874-124893 | MsG0080048309.01.T01:intron | 25.0% |
! | CAACATGTTATGATCAATTA+GGG | - | contig271end:123376-123395 | MsG0080048309.01.T01:intron | 25.0% |
! | CATAGTGTATTTGCTTATAA+TGG | + | contig271end:123303-123322 | None:intergenic | 25.0% |
! | CATTTGTATGAATACTCAAA+AGG | + | contig271end:123465-123484 | None:intergenic | 25.0% |
! | CTCAACAAAACAAAATCATA+AGG | + | contig271end:124652-124671 | None:intergenic | 25.0% |
! | CTCCATGTATAAGTAATTTA+GGG | - | contig271end:123167-123186 | MsG0080048309.01.T01:intron | 25.0% |
! | GTGGTTCAGATAAATAAATT+GGG | - | contig271end:124470-124489 | MsG0080048309.01.T01:intron | 25.0% |
! | TAAAGATAAGTCATTAATGG+TGG | - | contig271end:121946-121965 | MsG0080048309.01.T01:CDS | 25.0% |
! | TAGTTCATAGTTGTTATCAA+AGG | + | contig271end:123437-123456 | None:intergenic | 25.0% |
! | TATCTGAACCACATAAATAA+GGG | + | contig271end:124462-124481 | None:intergenic | 25.0% |
! | TGTGGTTCAGATAAATAAAT+TGG | - | contig271end:124469-124488 | MsG0080048309.01.T01:intron | 25.0% |
! | TGTTTACCATTAGATTAAAG+TGG | + | contig271end:122046-122065 | None:intergenic | 25.0% |
! | TTATCTGAACCACATAAATA+AGG | + | contig271end:124463-124482 | None:intergenic | 25.0% |
!! | ATTTACCTTGTATTGATACT+TGG | - | contig271end:125425-125444 | MsG0080048309.01.T01:intron | 25.0% |
!! | TATAAGAAAAAGTATATCGC+AGG | + | contig271end:123129-123148 | None:intergenic | 25.0% |
!!! | CGAATTGATTGATTTTTCTA+TGG | + | contig271end:124573-124592 | None:intergenic | 25.0% |
!!! | CTTTTGAGTATTCATACAAA+TGG | - | contig271end:123463-123482 | MsG0080048309.01.T01:intron | 25.0% |
!!! | TAGAGCGTGTTTTTAATTTT+TGG | + | contig271end:124194-124213 | None:intergenic | 25.0% |
!!! | TATGATTTTGTTTTGTTGAG+AGG | - | contig271end:124652-124671 | MsG0080048309.01.T01:intron | 25.0% |
!!! | TGAAGTAATTGTTGATTTTG+TGG | + | contig271end:125045-125064 | None:intergenic | 25.0% |
AACCACATAAATAAGGGATT+TGG | + | contig271end:124456-124475 | None:intergenic | 30.0% | |
AAGGTTCGAATATACCAAAT+AGG | + | contig271end:125253-125272 | None:intergenic | 30.0% | |
ACAAACTAAATAATTCCGTG+TGG | - | contig271end:121997-122016 | MsG0080048309.01.T01:CDS | 30.0% | |
ACACTTAAATGTGTCAGAAA+CGG | + | contig271end:123497-123516 | None:intergenic | 30.0% | |
ACTAAAAGGGATCTCAATTT+GGG | + | contig271end:122426-122445 | None:intergenic | 30.0% | |
ACTATCTTCAAACCCTAAAT+TGG | + | contig271end:125620-125639 | None:intergenic | 30.0% | |
ACTGTAGGGTTATTAACAAT+TGG | + | contig271end:125487-125506 | None:intergenic | 30.0% | |
AGGAATATGGAAGAAAATGA+AGG | - | contig271end:125658-125677 | MsG0080048309.01.T01:intron | 30.0% | |
AGTATATATTGATGCAAGCA+TGG | + | contig271end:123019-123038 | None:intergenic | 30.0% | |
AGTGTTTGTAAGTATAAGAG+AGG | - | contig271end:125304-125323 | MsG0080048309.01.T01:intron | 30.0% | |
ATACTAATTGTCCTATGTGT+AGG | - | contig271end:125458-125477 | MsG0080048309.01.T01:intron | 30.0% | |
ATGAGAGCTACATATATTGA+TGG | + | contig271end:123257-123276 | None:intergenic | 30.0% | |
ATTTGGTATATTCGAACCTT+AGG | - | contig271end:125253-125272 | MsG0080048309.01.T01:intron | 30.0% | |
CATGATTAGGATACTACATT+GGG | + | contig271end:122644-122663 | None:intergenic | 30.0% | |
GCAACATGTTATGATCAATT+AGG | - | contig271end:123375-123394 | MsG0080048309.01.T01:intron | 30.0% | |
GCTCCATGTATAAGTAATTT+AGG | - | contig271end:123166-123185 | MsG0080048309.01.T01:intron | 30.0% | |
GGAATATGGAAGAAAATGAA+GGG | - | contig271end:125659-125678 | MsG0080048309.01.T01:intron | 30.0% | |
GGTTAATGGAAATGAGAATT+TGG | - | contig271end:125873-125892 | MsG0080048309.01.T01:intron | 30.0% | |
GTATGAATACTCAAAAGGAA+AGG | + | contig271end:123460-123479 | None:intergenic | 30.0% | |
GTGAAAGTGAAACCAATTTA+GGG | - | contig271end:125605-125624 | MsG0080048309.01.T01:intron | 30.0% | |
GTGCAATTTATATCAGTTTC+AGG | - | contig271end:125113-125132 | MsG0080048309.01.T01:intron | 30.0% | |
GTGTATTTGCTTATAATGGT+TGG | + | contig271end:123299-123318 | None:intergenic | 30.0% | |
TACACTGCAATCAACAAATT+TGG | + | contig271end:124417-124436 | None:intergenic | 30.0% | |
TACTAAAAGGGATCTCAATT+TGG | + | contig271end:122427-122446 | None:intergenic | 30.0% | |
TACTAATTGTCCTATGTGTA+GGG | - | contig271end:125459-125478 | MsG0080048309.01.T01:intron | 30.0% | |
TATCCTAATCATGCATGAAA+TGG | - | contig271end:122651-122670 | MsG0080048309.01.T01:intron | 30.0% | |
TATGTTGCATACTATCTGTT+TGG | - | contig271end:123319-123338 | MsG0080048309.01.T01:intron | 30.0% | |
TGAGAGCTACATATATTGAT+GGG | + | contig271end:123256-123275 | None:intergenic | 30.0% | |
TGATTATGATTCGTCAAAAC+TGG | - | contig271end:122720-122739 | MsG0080048309.01.T01:intron | 30.0% | |
TGATTCTGAATTGAGGAATA+TGG | - | contig271end:125645-125664 | MsG0080048309.01.T01:intron | 30.0% | |
TGCCCTAAATTACTTATACA+TGG | + | contig271end:123172-123191 | None:intergenic | 30.0% | |
TTGAGGTATGTGAAAATGAA+AGG | - | contig271end:125686-125705 | MsG0080048309.01.T01:intron | 30.0% | |
TTTGACGAATCATAATCATG+TGG | + | contig271end:122718-122737 | None:intergenic | 30.0% | |
! | AAATGTGTTTTGTCCAACTA+GGG | + | contig271end:122922-122941 | None:intergenic | 30.0% |
! | AGGTTATACGACAATCTTTT+AGG | + | contig271end:123109-123128 | None:intergenic | 30.0% |
! | ATAATTGATCAAGTTGCTCT+TGG | - | contig271end:122875-122894 | MsG0080048309.01.T01:intron | 30.0% |
! | ATCCAAATCCCTTATTTATG+TGG | - | contig271end:124451-124470 | MsG0080048309.01.T01:intron | 30.0% |
! | CTTTGGCAGTTTTTATAAAG+AGG | + | contig271end:122269-122288 | None:intergenic | 30.0% |
! | GAAGTAGTAGCTTTTCTTTT+AGG | - | contig271end:125911-125930 | MsG0080048309.01.T01:intron | 30.0% |
! | GATGTTTCTGATGAAAATAG+TGG | - | contig271end:125583-125602 | MsG0080048309.01.T01:intron | 30.0% |
! | GGACATACTTAGAGTTTTTA+AGG | + | contig271end:123235-123254 | None:intergenic | 30.0% |
! | TTTTTCTATGGGCAATTTGT+TGG | + | contig271end:124561-124580 | None:intergenic | 30.0% |
!! | AAAACTGATTCGTAAAAGTG+AGG | - | contig271end:124119-124138 | MsG0080048309.01.T01:intron | 30.0% |
!! | AAACTGATTCGTAAAAGTGA+GGG | - | contig271end:124120-124139 | MsG0080048309.01.T01:intron | 30.0% |
!! | CAATGATGATGCTATTTCAA+AGG | - | contig271end:125852-125871 | MsG0080048309.01.T01:intron | 30.0% |
!! | CATTGTTTTACAAACTAGAC+AGG | + | contig271end:122352-122371 | None:intergenic | 30.0% |
!! | GATGCTATTTCAAAGGTTAA+TGG | - | contig271end:125859-125878 | MsG0080048309.01.T01:intron | 30.0% |
!! | GTGTTTTTGATTCTGAATTG+AGG | - | contig271end:125638-125657 | MsG0080048309.01.T01:intron | 30.0% |
!! | GTTGGATTTTTGGGAATAAT+AGG | - | contig271end:122753-122772 | MsG0080048309.01.T01:intron | 30.0% |
!! | TAGATTCTAGAATTCGAGTA+TGG | - | contig271end:124212-124231 | MsG0080048309.01.T01:intron | 30.0% |
!! | TGATAGTTGCTGTTATTTCA+TGG | - | contig271end:122782-122801 | MsG0080048309.01.T01:intron | 30.0% |
!! | TGATTCTAGTTCAAGTTCAT+TGG | - | contig271end:125546-125565 | MsG0080048309.01.T01:intron | 30.0% |
!!! | AGTAATTGTTGATTTTGTGG+TGG | + | contig271end:125042-125061 | None:intergenic | 30.0% |
!!! | TTTTTTTCTTTCTGTCGTAC+TGG | + | contig271end:123976-123995 | None:intergenic | 30.0% |
AAAAGTGAGGGAAAGAAGAT+GGG | - | contig271end:124132-124151 | MsG0080048309.01.T01:intron | 35.0% | |
AACAGATTGATGAAGACCTA+AGG | + | contig271end:125272-125291 | None:intergenic | 35.0% | |
AAGAAGAAGAAGCAGCTTAA+GGG | - | contig271end:125141-125160 | MsG0080048309.01.T01:intron | 35.0% | |
AAGGGAAAATTAATTCCAGC+AGG | + | contig271end:124633-124652 | None:intergenic | 35.0% | |
AAGTCATTAATGGTGGTTGT+GGG | - | contig271end:121953-121972 | MsG0080048309.01.T01:CDS | 35.0% | |
AATTTGGCAACTACTTCCAA+AGG | - | contig271end:125889-125908 | MsG0080048309.01.T01:intron | 35.0% | |
ACTGTCTGATCTTGATTAGA+CGG | - | contig271end:124390-124409 | MsG0080048309.01.T01:intron | 35.0% | |
AGAAAAGCTACTACTTCCTT+TGG | + | contig271end:125908-125927 | None:intergenic | 35.0% | |
AGTGCTCCACTTTAATCTAA+TGG | - | contig271end:122037-122056 | MsG0080048309.01.T01:CDS | 35.0% | |
ATAGTTGTTATCAAAGGCAG+TGG | + | contig271end:123431-123450 | None:intergenic | 35.0% | |
ATATGATACATGCGCATCTT+TGG | - | contig271end:122480-122499 | MsG0080048309.01.T01:CDS | 35.0% | |
ATGGGAAATTTCTTCTGTCT+TGG | - | contig271end:125989-126008 | MsG0080048309.01.T01:CDS | 35.0% | |
ATTCTATTAAGCAGATCCTC+AGG | + | contig271end:122403-122422 | None:intergenic | 35.0% | |
CAACAGCTCAACAAAATGAT+AGG | - | contig271end:125176-125195 | MsG0080048309.01.T01:intron | 35.0% | |
CAACCATTTCATGCATGATT+AGG | + | contig271end:122657-122676 | None:intergenic | 35.0% | |
CACTTAAATGTGTCAGAAAC+GGG | + | contig271end:123496-123515 | None:intergenic | 35.0% | |
CTAAGCCAAGTATCAATACA+AGG | + | contig271end:125433-125452 | None:intergenic | 35.0% | |
GACAATGGAAAATATGGGTT+TGG | - | contig271end:121919-121938 | MsG0080048309.01.T01:CDS | 35.0% | |
GAGTATGGTCATTTCGAATA+TGG | - | contig271end:124227-124246 | MsG0080048309.01.T01:intron | 35.0% | |
GCATAGAAGAAAACATCTTG+AGG | - | contig271end:122850-122869 | MsG0080048309.01.T01:intron | 35.0% | |
GCATGATTAGGATACTACAT+TGG | + | contig271end:122645-122664 | None:intergenic | 35.0% | |
GGATAGTAATAAGGGATTTG+TGG | + | contig271end:124983-125002 | None:intergenic | 35.0% | |
GGTAGAGATGAAAATAAAGC+AGG | - | contig271end:124491-124510 | MsG0080048309.01.T01:intron | 35.0% | |
GGTGAAAGTGAAACCAATTT+AGG | - | contig271end:125604-125623 | MsG0080048309.01.T01:intron | 35.0% | |
GTAAACAAACAACTTTCCCA+TGG | - | contig271end:122059-122078 | MsG0080048309.01.T01:CDS | 35.0% | |
GTCTCAAAAGTTGTCACAAA+TGG | - | contig271end:122227-122246 | MsG0080048309.01.T01:CDS | 35.0% | |
TAAAAGTGAGGGAAAGAAGA+TGG | - | contig271end:124131-124150 | MsG0080048309.01.T01:intron | 35.0% | |
TAAGTCATTAATGGTGGTTG+TGG | - | contig271end:121952-121971 | MsG0080048309.01.T01:CDS | 35.0% | |
TAATAACCCTACAGTTGCTA+GGG | - | contig271end:125492-125511 | MsG0080048309.01.T01:intron | 35.0% | |
TATGAATCTAGAGAGTGATG+TGG | - | contig271end:123673-123692 | MsG0080048309.01.T01:intron | 35.0% | |
TCATGATTCTCCATGTATGT+AGG | - | contig271end:122951-122970 | MsG0080048309.01.T01:intron | 35.0% | |
TCGACGACAATGGAAAATAT+GGG | - | contig271end:121914-121933 | MsG0080048309.01.T01:CDS | 35.0% | |
TGTAAGTATAAGAGAGGTGA+AGG | - | contig271end:125310-125329 | MsG0080048309.01.T01:intron | 35.0% | |
TGTAGAGATTGTGGCAAAAT+AGG | + | contig271end:122531-122550 | None:intergenic | 35.0% | |
TTAATAACCCTACAGTTGCT+AGG | - | contig271end:125491-125510 | MsG0080048309.01.T01:intron | 35.0% | |
TTCGACGACAATGGAAAATA+TGG | - | contig271end:121913-121932 | MsG0080048309.01.T01:CDS | 35.0% | |
TTCTATTAAGCAGATCCTCA+GGG | + | contig271end:122402-122421 | None:intergenic | 35.0% | |
TTGGATCATCCGAATAAGAT+CGG | - | contig271end:124302-124321 | MsG0080048309.01.T01:intron | 35.0% | |
! | AATGTGTTTTGTCCAACTAG+GGG | + | contig271end:122921-122940 | None:intergenic | 35.0% |
! | ACTTTTCACCTGTTCGATTA+GGG | - | contig271end:122294-122313 | MsG0080048309.01.T01:CDS | 35.0% |
! | CAAATGTGTTTTGTCCAACT+AGG | + | contig271end:122923-122942 | None:intergenic | 35.0% |
! | CTTGTATTGATACTTGGCTT+AGG | - | contig271end:125431-125450 | MsG0080048309.01.T01:intron | 35.0% |
! | GTGATGGAGGATAGTAATAA+GGG | + | contig271end:124991-125010 | None:intergenic | 35.0% |
! | TGAAAAGCATGATGACACTT+AGG | + | contig271end:125406-125425 | None:intergenic | 35.0% |
! | TTGAAGATGATGATGAAGTG+AGG | + | contig271end:124799-124818 | None:intergenic | 35.0% |
! | TTTTATCATGGTCATCCACA+CGG | + | contig271end:122015-122034 | None:intergenic | 35.0% |
!! | AACCAAGTATCGATGAACAA+TGG | - | contig271end:124046-124065 | MsG0080048309.01.T01:intron | 35.0% |
!! | CAGGTGAAAAGTGTTAACTT+TGG | + | contig271end:122286-122305 | None:intergenic | 35.0% |
!! | TTTTGTTGAGCTGTTGATGA+TGG | + | contig271end:125172-125191 | None:intergenic | 35.0% |
!!! | AGAAAATGAAGGGCATTTTG+AGG | - | contig271end:125669-125688 | MsG0080048309.01.T01:intron | 35.0% |
!!! | TGTAGTTTTGGAAGAGATTG+AGG | - | contig271end:121860-121879 | MsG0080048309.01.T01:CDS | 35.0% |
AAGAGGTCAAGTTCGTACAA+TGG | - | contig271end:125970-125989 | MsG0080048309.01.T01:CDS | 40.0% | |
ACAAACAACTTTCCCATGGT+AGG | - | contig271end:122063-122082 | MsG0080048309.01.T01:CDS | 40.0% | |
ACAAGTGCCTCATATTCGAT+TGG | - | contig271end:122548-122567 | MsG0080048309.01.T01:CDS | 40.0% | |
ACACCCTGCAAATATCTTGT+TGG | + | contig271end:125937-125956 | None:intergenic | 40.0% | |
AGAGGTCAAGTTCGTACAAT+GGG | - | contig271end:125971-125990 | MsG0080048309.01.T01:CDS | 40.0% | |
AGAGGTGAAGGTTTGATTGA+AGG | - | contig271end:125322-125341 | MsG0080048309.01.T01:intron | 40.0% | |
AGCTCTCATGTATGAGAAGA+TGG | - | contig271end:123268-123287 | MsG0080048309.01.T01:intron | 40.0% | |
AGGCCAACAAGATATTTGCA+GGG | - | contig271end:125931-125950 | MsG0080048309.01.T01:intron | 40.0% | |
ATAGACCGTCCGATCTTATT+CGG | + | contig271end:124314-124333 | None:intergenic | 40.0% | |
ATCATCCGAATAAGATCGGA+CGG | - | contig271end:124306-124325 | MsG0080048309.01.T01:intron | 40.0% | |
ATCATGCTATTGCCTAGCAA+AGG | - | contig271end:123790-123809 | MsG0080048309.01.T01:intron | 40.0% | |
ATGATCCATATGCTCAACAC+AGG | - | contig271end:122691-122710 | MsG0080048309.01.T01:intron | 40.0% | |
ATGCGCATGTATCATATCCT+TGG | + | contig271end:122477-122496 | None:intergenic | 40.0% | |
ATGGATCATATGCTGAATCG+AGG | + | contig271end:122680-122699 | None:intergenic | 40.0% | |
CACTCTCTAGATTCATATCC+TGG | + | contig271end:123670-123689 | None:intergenic | 40.0% | |
CTCTTCCAAAACTACATCAC+CGG | + | contig271end:121856-121875 | None:intergenic | 40.0% | |
GAAGAACAACAGCATCAACA+TGG | - | contig271end:125211-125230 | MsG0080048309.01.T01:intron | 40.0% | |
GAAGAAGAAGAAGCAGCTTA+AGG | - | contig271end:125140-125159 | MsG0080048309.01.T01:intron | 40.0% | |
GAATAACTTAGCAAACCTGC+TGG | - | contig271end:124615-124634 | MsG0080048309.01.T01:intron | 40.0% | |
GGATTATGAGCCTACATACA+TGG | + | contig271end:122964-122983 | None:intergenic | 40.0% | |
GGTCTGATTCATGGTTCAAT+CGG | - | contig271end:122316-122335 | MsG0080048309.01.T01:CDS | 40.0% | |
GTATCATATCCTTGGCAGTT+GGG | + | contig271end:122469-122488 | None:intergenic | 40.0% | |
GTATGTAGGCTCATAATCCA+GGG | - | contig271end:122965-122984 | MsG0080048309.01.T01:intron | 40.0% | |
TAATACGTGAACCACTTGAC+AGG | + | contig271end:123619-123638 | None:intergenic | 40.0% | |
TACGAACTTGACCTCTTCAT+TGG | + | contig271end:125967-125986 | None:intergenic | 40.0% | |
TAGGCCAACAAGATATTTGC+AGG | - | contig271end:125930-125949 | MsG0080048309.01.T01:intron | 40.0% | |
TCGGATGATCCAAAAGTGAT+TGG | + | contig271end:124295-124314 | None:intergenic | 40.0% | |
TCTCTAGATTCATATCCTGG+AGG | + | contig271end:123667-123686 | None:intergenic | 40.0% | |
TGCCATTGTTCATCGATACT+TGG | + | contig271end:124051-124070 | None:intergenic | 40.0% | |
TGTATCATATCCTTGGCAGT+TGG | + | contig271end:122470-122489 | None:intergenic | 40.0% | |
TGTATGTAGGCTCATAATCC+AGG | - | contig271end:122964-122983 | MsG0080048309.01.T01:intron | 40.0% | |
TGTTATCAAAGGCAGTGGAT+TGG | + | contig271end:123426-123445 | None:intergenic | 40.0% | |
TTTCGGTTCACATACTCTGT+CGG | + | contig271end:124527-124546 | None:intergenic | 40.0% | |
! | AGCAGTGATGGTTGGATTTT+TGG | - | contig271end:122743-122762 | MsG0080048309.01.T01:intron | 40.0% |
! | AGCCAATTCCCTAAAAGTGT+TGG | - | contig271end:122988-123007 | MsG0080048309.01.T01:intron | 40.0% |
! | AGGGAAAGATTTTCCTACCA+TGG | + | contig271end:122079-122098 | None:intergenic | 40.0% |
! | ATGGATCCTCCAACACTTTT+AGG | + | contig271end:123000-123019 | None:intergenic | 40.0% |
! | CACTTTTCACCTGTTCGATT+AGG | - | contig271end:122293-122312 | MsG0080048309.01.T01:CDS | 40.0% |
! | CTTTTATAGACATGATCGGC+CGG | + | contig271end:122120-122139 | None:intergenic | 40.0% |
! | CTTTTCACCTGTTCGATTAG+GGG | - | contig271end:122295-122314 | MsG0080048309.01.T01:CDS | 40.0% |
! | GCAGTGATGGTTGGATTTTT+GGG | - | contig271end:122744-122763 | MsG0080048309.01.T01:intron | 40.0% |
! | GGGAAAGATTTTCCTACCAT+GGG | + | contig271end:122078-122097 | None:intergenic | 40.0% |
! | TGGATCCTCCAACACTTTTA+GGG | + | contig271end:122999-123018 | None:intergenic | 40.0% |
! | TGGCACAATGTAGCTGATTT+AGG | - | contig271end:124066-124085 | MsG0080048309.01.T01:intron | 40.0% |
! | TGTTGGTTGGACTTCACTTT+CGG | + | contig271end:124544-124563 | None:intergenic | 40.0% |
! | TTTGTCATTGTGAAGGGTGT+AGG | - | contig271end:122828-122847 | MsG0080048309.01.T01:intron | 40.0% |
!! | CAATTCCCTAAAAGTGTTGG+AGG | - | contig271end:122991-123010 | MsG0080048309.01.T01:intron | 40.0% |
!! | CCAATGGGAAGGTACTAAAA+GGG | + | contig271end:122439-122458 | None:intergenic | 40.0% |
!! | CTCCAACACTTTTAGGGAAT+TGG | + | contig271end:122993-123012 | None:intergenic | 40.0% |
!! | GGTGATGGAGGATAGTAATA+AGG | + | contig271end:124992-125011 | None:intergenic | 40.0% |
!! | TCTATGGGCAATTTGTTGGT+TGG | + | contig271end:124557-124576 | None:intergenic | 40.0% |
!! | TCTGTCGTACTGGTTAAGTT+CGG | + | contig271end:123966-123985 | None:intergenic | 40.0% |
!! | TCTTGTTGTTGTGATGATGG+TGG | + | contig271end:125019-125038 | None:intergenic | 40.0% |
!! | TGGTCTTGTTGTTGTGATGA+TGG | + | contig271end:125022-125041 | None:intergenic | 40.0% |
!! | TGTTGCTTGCATTTTCTGAG+AGG | + | contig271end:123361-123380 | None:intergenic | 40.0% |
!!! | GTGGAGCACTGATTTTATCA+TGG | + | contig271end:122027-122046 | None:intergenic | 40.0% |
!!! | TTTTGAGGTCGTTAAGTCGT+CGG | - | contig271end:121822-121841 | MsG0080048309.01.T01:CDS | 40.0% |
AAAACTGGAGCAGTGATGGT+TGG | - | contig271end:122735-122754 | MsG0080048309.01.T01:intron | 45.0% | |
AATCAGACCCCTAATCGAAC+AGG | + | contig271end:122305-122324 | None:intergenic | 45.0% | |
ACAATTGGAGCCCTACACAT+AGG | + | contig271end:125472-125491 | None:intergenic | 45.0% | |
ACACTGACCCATCTCAATCT+CGG | + | contig271end:121803-121822 | None:intergenic | 45.0% | |
ACAGCATCAACATGGATCTG+TGG | - | contig271end:125219-125238 | MsG0080048309.01.T01:intron | 45.0% | |
ACTCAACCCTAGCAACTGTA+GGG | + | contig271end:125501-125520 | None:intergenic | 45.0% | |
AGAGGCGAATATGTAAGAGC+CGG | + | contig271end:123752-123771 | None:intergenic | 45.0% | |
AGGGGAGTTTGTCATTGTGA+AGG | - | contig271end:122821-122840 | MsG0080048309.01.T01:intron | 45.0% | |
AGTTGCTAGGGTTGAGTCTT+TGG | - | contig271end:125504-125523 | MsG0080048309.01.T01:intron | 45.0% | |
ATCAATTAGGGTGTAGCCCA+TGG | - | contig271end:123388-123407 | MsG0080048309.01.T01:intron | 45.0% | |
ATCGAGGCCAATCGAATATG+AGG | + | contig271end:122558-122577 | None:intergenic | 45.0% | |
CAGTTGGGATACTAGCCAAT+GGG | + | contig271end:122454-122473 | None:intergenic | 45.0% | |
CATACATGTTGATCGCTAGC+AGG | + | contig271end:123828-123847 | None:intergenic | 45.0% | |
CTTGACCTCTTCATTGGACT+AGG | + | contig271end:125961-125980 | None:intergenic | 45.0% | |
GATGACTCTCCTTCAAGTGT+GGG | - | contig271end:122575-122594 | MsG0080048309.01.T01:CDS | 45.0% | |
GGGGAGTTTGTCATTGTGAA+GGG | - | contig271end:122822-122841 | MsG0080048309.01.T01:intron | 45.0% | |
GTGTTCCTAGTCCAATGAAG+AGG | - | contig271end:125953-125972 | MsG0080048309.01.T01:CDS | 45.0% | |
TACTATTAGCGACCCCTAGT+TGG | - | contig271end:122906-122925 | MsG0080048309.01.T01:intron | 45.0% | |
TATTAAGCAGATCCTCAGGG+AGG | + | contig271end:122399-122418 | None:intergenic | 45.0% | |
TCAAGTGTGGGTAGCAAGTA+GGG | - | contig271end:122587-122606 | MsG0080048309.01.T01:CDS | 45.0% | |
TCATTAATGGTGGTTGTGGG+TGG | - | contig271end:121956-121975 | MsG0080048309.01.T01:CDS | 45.0% | |
TCGATTAGGGGTCTGATTCA+TGG | - | contig271end:122307-122326 | MsG0080048309.01.T01:CDS | 45.0% | |
TCTTTGGATCAAGTCTGCAG+TGG | - | contig271end:122496-122515 | MsG0080048309.01.T01:CDS | 45.0% | |
TGAAAGGCAAGTTGTCGATG+CGG | - | contig271end:125702-125721 | MsG0080048309.01.T01:intron | 45.0% | |
TTCAAGTGTGGGTAGCAAGT+AGG | - | contig271end:122586-122605 | MsG0080048309.01.T01:CDS | 45.0% | |
TTTGGAAGAGATTGAGGCAC+CGG | - | contig271end:121866-121885 | MsG0080048309.01.T01:CDS | 45.0% | |
! | AAGCAAGAAGAGAAAGCGTG+AGG | + | contig271end:125069-125088 | None:intergenic | 45.0% |
! | ACACTGCAGCCAATCACTTT+TGG | - | contig271end:124283-124302 | MsG0080048309.01.T01:intron | 45.0% |
! | ATGGATGTCTAGAGCAGTGA+AGG | - | contig271end:122801-122820 | MsG0080048309.01.T01:intron | 45.0% |
! | CATACTCTGTCGGTTGGATT+AGG | + | contig271end:124517-124536 | None:intergenic | 45.0% |
! | CCCTTTTAGTACCTTCCCAT+TGG | - | contig271end:122436-122455 | MsG0080048309.01.T01:CDS | 45.0% |
! | TACTTGCTACCCACACTTGA+AGG | + | contig271end:122587-122606 | None:intergenic | 45.0% |
! | TGAGATGGGTCAGTGTTTTG+AGG | - | contig271end:121807-121826 | MsG0080048309.01.T01:CDS | 45.0% |
! | TGAGGCACTTGTAGAGATTG+TGG | + | contig271end:122540-122559 | None:intergenic | 45.0% |
! | TGGATGTCTAGAGCAGTGAA+GGG | - | contig271end:122802-122821 | MsG0080048309.01.T01:intron | 45.0% |
! | TTTGAGGTCGTTAAGTCGTC+GGG | - | contig271end:121823-121842 | MsG0080048309.01.T01:CDS | 45.0% |
! | TTTGGCCGGTGATGTAGTTT+TGG | - | contig271end:121848-121867 | MsG0080048309.01.T01:CDS | 45.0% |
!! | CTGTGGTGGATCATCCTATT+TGG | - | contig271end:125236-125255 | MsG0080048309.01.T01:intron | 45.0% |
!! | GCCAATGGGAAGGTACTAAA+AGG | + | contig271end:122440-122459 | None:intergenic | 45.0% |
!! | TGCTTGCATTTTCTGAGAGG+TGG | + | contig271end:123358-123377 | None:intergenic | 45.0% |
!! | TGTTGTTGTGATGATGGTGG+TGG | + | contig271end:125016-125035 | None:intergenic | 45.0% |
!! | AATAATTAAATAATAATGAT+AGG | + | contig271end:124688-124707 | None:intergenic | 5.0% |
!! | ATAATTAAATAATAATGATA+GGG | + | contig271end:124687-124706 | None:intergenic | 5.0% |
!!! | TAATTATTATTATTTTAGTT+TGG | + | contig271end:123524-123543 | None:intergenic | 5.0% |
AATATGTCGTACGAGCCTCC+AGG | - | contig271end:123649-123668 | MsG0080048309.01.T01:intron | 50.0% | |
AGATGAGACTAGGGTGCATG+AGG | + | contig271end:123725-123744 | None:intergenic | 50.0% | |
ATGAGACGCAACGTCGAAAG+AGG | + | contig271end:123770-123789 | None:intergenic | 50.0% | |
ATTGGAAGACCTCGCTACCA+TGG | + | contig271end:123408-123427 | None:intergenic | 50.0% | |
CACTTGAAGGAGAGTCATCG+AGG | + | contig271end:122574-122593 | None:intergenic | 50.0% | |
CACTTGACAGGCGCATATGA+GGG | + | contig271end:123607-123626 | None:intergenic | 50.0% | |
CGATGACTCTCCTTCAAGTG+TGG | - | contig271end:122574-122593 | MsG0080048309.01.T01:CDS | 50.0% | |
CGTCAAAACTGGAGCAGTGA+TGG | - | contig271end:122731-122750 | MsG0080048309.01.T01:intron | 50.0% | |
CGTCGGAAATTCGACGACAA+TGG | - | contig271end:121904-121923 | MsG0080048309.01.T01:CDS | 50.0% | |
CTATTGCCTAGCAAAGGCAG+TGG | - | contig271end:123796-123815 | MsG0080048309.01.T01:intron | 50.0% | |
CTTGACGCCGAGATTGAGAT+GGG | - | contig271end:121793-121812 | MsG0080048309.01.T01:CDS | 50.0% | |
GAATCATGTTTATCGCCGCC+GGG | - | contig271end:121753-121772 | MsG0080048309.01.T01:CDS | 50.0% | |
GACTCAACCCTAGCAACTGT+AGG | + | contig271end:125502-125521 | None:intergenic | 50.0% | |
GCAGTTGGGATACTAGCCAA+TGG | + | contig271end:122455-122474 | None:intergenic | 50.0% | |
GCATCAACATGGATCTGTGG+TGG | - | contig271end:125222-125241 | MsG0080048309.01.T01:intron | 50.0% | |
GGAATCATGTTTATCGCCGC+CGG | - | contig271end:121752-121771 | MsG0080048309.01.T01:CDS | 50.0% | |
GGTTCACATACTCTGTCGGT+TGG | + | contig271end:124523-124542 | None:intergenic | 50.0% | |
GTGGACCTGTGTTGAGCATA+TGG | + | contig271end:122699-122718 | None:intergenic | 50.0% | |
TCACCTACCCTAAATGCCAC+CGG | - | contig271end:122098-122117 | MsG0080048309.01.T01:CDS | 50.0% | |
TCGTTAAGTCGTCGGGGATT+TGG | - | contig271end:121830-121849 | MsG0080048309.01.T01:CDS | 50.0% | |
TCTACGACTTCTCCACCTGA+GGG | + | contig271end:123200-123219 | None:intergenic | 50.0% | |
TCTTGACGCCGAGATTGAGA+TGG | - | contig271end:121792-121811 | MsG0080048309.01.T01:CDS | 50.0% | |
TGGGATACTAGCCAATGGGA+AGG | + | contig271end:122450-122469 | None:intergenic | 50.0% | |
TTAATGGTGGTTGTGGGTGG+AGG | - | contig271end:121959-121978 | MsG0080048309.01.T01:CDS | 50.0% | |
TTATAGACATGATCGGCCGG+TGG | + | contig271end:122117-122136 | None:intergenic | 50.0% | |
TTGAGGTCGTTAAGTCGTCG+GGG | - | contig271end:121824-121843 | MsG0080048309.01.T01:CDS | 50.0% | |
TTGGAAGACCTCGCTACCAT+GGG | + | contig271end:123407-123426 | None:intergenic | 50.0% | |
TTGTCGTCGAATTTCCGACG+TGG | + | contig271end:121904-121923 | None:intergenic | 50.0% | |
! | ACCCTAGTCTCATCTAGCTC+CGG | - | contig271end:123730-123749 | MsG0080048309.01.T01:intron | 50.0% |
! | ATTTAGGGCAGTAGTCCCTC+AGG | - | contig271end:123182-123201 | MsG0080048309.01.T01:intron | 50.0% |
! | GGATGTCTAGAGCAGTGAAG+GGG | - | contig271end:122803-122822 | MsG0080048309.01.T01:intron | 50.0% |
! | GTGGCATTTAGGGTAGGTGA+GGG | + | contig271end:122098-122117 | None:intergenic | 50.0% |
! | TCGATGCGGTTAGTGTCGTT+CGG | - | contig271end:125716-125735 | MsG0080048309.01.T01:intron | 50.0% |
!! | CTTTTAGGGAATTGGCTCCC+TGG | + | contig271end:122985-123004 | None:intergenic | 50.0% |
!! | GTTGTGGGTGGAGGTTGATA+AGG | - | contig271end:121968-121987 | MsG0080048309.01.T01:CDS | 50.0% |
!! | TGTTGTGATGATGGTGGTGG+TGG | + | contig271end:125013-125032 | None:intergenic | 50.0% |
AGCCGGAGCTAGATGAGACT+AGG | + | contig271end:123735-123754 | None:intergenic | 55.0% | |
ATGATCGGCCGGTGGCATTT+AGG | + | contig271end:122109-122128 | None:intergenic | 55.0% | |
CCACTTGACAGGCGCATATG+AGG | + | contig271end:123608-123627 | None:intergenic | 55.0% | |
CCTCATATGCGCCTGTCAAG+TGG | - | contig271end:123605-123624 | MsG0080048309.01.T01:intron | 55.0% | |
CTCGGCGTCAAGAACTTCAC+TGG | + | contig271end:121785-121804 | None:intergenic | 55.0% | |
GCCGGAGCTAGATGAGACTA+GGG | + | contig271end:123734-123753 | None:intergenic | 55.0% | |
GGCTAGTATCCCAACTGCCA+AGG | - | contig271end:122457-122476 | MsG0080048309.01.T01:CDS | 55.0% | |
GTCTACGACTTCTCCACCTG+AGG | + | contig271end:123201-123220 | None:intergenic | 55.0% | |
TAAGTCGTCGGGGATTTGGC+CGG | - | contig271end:121834-121853 | MsG0080048309.01.T01:CDS | 55.0% | |
TCTCAGCCACTGCCTTTGCT+AGG | + | contig271end:123805-123824 | None:intergenic | 55.0% | |
TGAGACTAGGGTGCATGAGG+CGG | + | contig271end:123722-123741 | None:intergenic | 55.0% | |
TGATCGGCCGGTGGCATTTA+GGG | + | contig271end:122108-122127 | None:intergenic | 55.0% | |
! | GGTGGCATTTAGGGTAGGTG+AGG | + | contig271end:122099-122118 | None:intergenic | 55.0% |
!! | GATGATGGTGGTGGTGGTGA+TGG | + | contig271end:125007-125026 | None:intergenic | 55.0% |
AGACTAGGGTGCATGAGGCG+GGG | + | contig271end:123720-123739 | None:intergenic | 60.0% | |
CAGATCCTCAGGGAGGCTCA+AGG | + | contig271end:122392-122411 | None:intergenic | 60.0% | |
GAACTTCACTGGCGACGTCC+CGG | + | contig271end:121774-121793 | None:intergenic | 60.0% | |
GACGTGGCTGTACCAACCTC+CGG | + | contig271end:121888-121907 | None:intergenic | 60.0% | |
GAGACTAGGGTGCATGAGGC+GGG | + | contig271end:123721-123740 | None:intergenic | 60.0% | |
TAGGGCAGTAGTCCCTCAGG+TGG | - | contig271end:123185-123204 | MsG0080048309.01.T01:intron | 60.0% | |
!! | GAGATTGAGGCACCGGAGGT+TGG | - | contig271end:121873-121892 | MsG0080048309.01.T01:CDS | 60.0% |
!! | GATGGTGGTGGTGGTGATGG+AGG | + | contig271end:125004-125023 | None:intergenic | 60.0% |
!! | GGAAGAGATTGAGGCACCGG+AGG | - | contig271end:121869-121888 | MsG0080048309.01.T01:CDS | 60.0% |
!! | GGAGGTTGGTACAGCCACGT+CGG | - | contig271end:121887-121906 | MsG0080048309.01.T01:CDS | 60.0% |
AGGCACCTTGAGCCTCCCTG+AGG | - | contig271end:122384-122403 | MsG0080048309.01.T01:CDS | 65.0% | |
GACTAGGGTGCATGAGGCGG+GGG | + | contig271end:123719-123738 | None:intergenic | 65.0% | |
TGAGGCGGGGGTAGAGCAAG+AGG | + | contig271end:123707-123726 | None:intergenic | 65.0% | |
! | CGGCCGGTGGCATTTAGGGT+AGG | + | contig271end:122104-122123 | None:intergenic | 65.0% |
! | GGGTGTAGCCCATGGTAGCG+AGG | - | contig271end:123396-123415 | MsG0080048309.01.T01:intron | 65.0% |
CTTCACTGGCGACGTCCCGG+CGG | + | contig271end:121771-121790 | None:intergenic | 70.0% | |
GGCGGGGGTAGAGCAAGAGG+AGG | + | contig271end:123704-123723 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
contig271end | gene | 121742 | 126059 | 121742 | ID=MsG0080048309.01;Name=MsG0080048309.01 |
contig271end | mRNA | 121742 | 126059 | 121742 | ID=MsG0080048309.01.T01;Parent=MsG0080048309.01;Name=MsG0080048309.01.T01;_AED=0.52;_eAED=0.53;_QI=0|0|0|0.66|1|1|3|0|363 |
contig271end | exon | 125946 | 126059 | 125946 | ID=MsG0080048309.01.T01:exon:2202;Parent=MsG0080048309.01.T01 |
contig271end | exon | 123270 | 123322 | 123270 | ID=MsG0080048309.01.T01:exon:2203;Parent=MsG0080048309.01.T01 |
contig271end | exon | 121742 | 122666 | 121742 | ID=MsG0080048309.01.T01:exon:2204;Parent=MsG0080048309.01.T01 |
contig271end | CDS | 125946 | 126059 | 125946 | ID=MsG0080048309.01.T01:cds;Parent=MsG0080048309.01.T01 |
contig271end | CDS | 123270 | 123322 | 123270 | ID=MsG0080048309.01.T01:cds;Parent=MsG0080048309.01.T01 |
contig271end | CDS | 121742 | 122666 | 121742 | ID=MsG0080048309.01.T01:cds;Parent=MsG0080048309.01.T01 |
Gene Sequence |
Protein sequence |